Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATACGACGAAGCTTCGAACAAGCGGACATTGATCGTAGATCACCGGGTAAGCACTCTCTCTCCCCTCAATTTCTCAACTCTTCCTGCAAAATCCTATCTTCAATCAAATTTTCTGCATCTCATGATTTATTCTAAGTTCTAAATCGCTAATTTTTTTTGCAGAAAATCAAACTCGAATTGGGATTTTTTTGAGAATTTTTCCGGGGATTTAGTTTGATTGAATCCTCTCTCTGCGACCGAAGTCAGAGCAAAAGAGAGAAGTTTTGAGTGCAGAGATTAAAGATGGGGTTTTTCGTTACATCCCTGATTTTCCTGGTGATTGGGATTATTGCTTGTCTTTGTACCAGAATTTGCTTCAATCGGGGCCCTTCCACCAATCTGTAATTTTTCTATCTCTCCTCTTTTGGATCTTTGATTCTGAATTTGATGGCTTTTAGCTGTACATTGTTGATTGATGATTGTTTATTGTTGATATGTCTCTTTTTTGATAATGACTTGTTTAAGTTTTGACTAGGAGCTTAAATGAGTTATTAATGTTCAACTAGAAGTAGTTTTTCATATGTAGTAGAGTGTAGAAGTGATTGGACTATATTGGAGAGGTATATGTGGAATTCTTTTTGTTAAAAGGACTTCAATTTATATGCAAAGAAGCAAACGATTCACGAGGACCATAATTAGTTTCCCTCCGTATATCTCAAAGAAACTGAGAAACAATTGAAACCCTTGATTTATGTATGTATGCTGTATTAATCTCAACATGTCTTGGGATGCTCTCAGGGGTAGTGGTTGCATAGTGCAAGTCTTCCCACTTCCTACAAGAGAACTAGACTAACATCACAATTGAAAAAAAATTAAGAACGGTGGTGAATAATATATAGGCCCTGTTTGGCAATTAGCGGTTAGCGGTTAGCTGTAGCGGATTGTATTAACTGGTTTGACTAGCTGTTTTGTATAGCTGATTTGACTAGATGATTGTATTAGCTGATTATAGGAAAGTGTTTGGTAAATAGCTTATTTATAATAGTTGTTTGATGTGTAAAATGACCAATTGGGACATTGGTTAATTTATTATTGAGTTACTTTTCATTAATAGGGAAAATTTGTTATTTAGATCTACAAAATTTAATTTTTGTATGAACATTGATTTTTTTAAAAGTGAATATTAACTAAACAAAAATTCAATATCAGGAGATATCTTTTAGATTTCTTTTATTTGACATAAGTTTTAGAAGCTTTTTTTTTTTTTTAATTCAATGCATTTAAAGTTTAATACAAAAAAAGGGAAAAACTAGTGACCCCCCATTCTACTCACCTCCCTCGTCATCTTCCTTCCAGAAAAACCCAAACCTTCTCACGCCACCCACTGCCATCACCATCTCCAGTAAACAAAAAATCAATTTCACAATTCATATCAAAGCTAATAGTCTTACTCCATACCAAGAAGTGGTGATGCTCAATTAGATCTTTCACAAATTTAAAAATTATCTTCAATTCATGAGCATATATTTGATCTAAAATTATTTTGTTGAATGTTAGATTTCTCAAATGGAGACATGAATGTATATTTGTGATCTGGAAGTATGAATGAAGATGGGGAACTTCCCTCTTTTTTAGTCAAGTAAAGAAAATTATTTTTCACACGGAGAAGGTTTGAGAAATTGGATAGAGCCATGGAGGCTCAAAGCTGGAATTCCTCTATCCTTGGGGCAAAGTTGTCTTTCCTTGTCTCAGATCTCAACAGCTAATTGAAAACGCTGCTAAATGGTGCTTTTTCAAAATTAGAGTTTCAAGTCCAATCCGCTAATTGAAACCGCTTCCAACCAAACACATGAATTAGCGGTTTTGCATAGTCAAACCTCTAACAGTTCTAAATCCGCTAAAAGCTCATCAAACCGCTATCTACCAAACAGGCCCATAAGCTATGCTTGCAAATTTGCAATTGCAGGGATGGAATTGCGTAATTCTATTTTGTAGTTTATAATTGTCAAGGGATGCTTTACTTTCCTAGATAATATATGATAATAAATAATTTGCCTAATTTGTTCATATCTAAAATTATTGACAAAACTGAGAGCAGACATCAACAAGGTCATGATATACAATGGGTAAAACGTAACTGGAATGCTATTAACTGATATTCGTAATTCTTTTGGCCTTGGATTTACTGAAAAAATTGAGGGTTACAGAAGACAAGTCAAAGATGCACTGTGTAATCTGTGGCATTCATGATGAGAATGAGGAAGTTGATAACCAGTTAAGGTAAATCATTTGCCAGTCAGTCTCACAAAATCATTCCAAGAGGCTCTTGTATTTCAACACAAATTGACCAAGATCAACTAAATAACTCTTGAATACACAGAATTAAATATGCTTCATTGCCAATTCGGAAGGCTAAAGCCGCATAACTTTTTGATAAGCTTTGTCAATACATGAATTTATCACCACGAGATGATTACAAACCTTGTTGAAGTAGCTAAAACCCCTGCCAACAATACGCTCCGGGGAAGAGACCAGAGGGAATCATAAAATATTGAGCCAGTCATGTTATAGTCAGCGTATAATTTGAATTTAAGTGGCCAGGGCTCATATCTGCTAAAGTTGTCTGATTTAAGACATAAATTGAAAATTACAGCTACGATACACTGATATTATATGTACATCAAGGTAAAATATAAATCATGGATCAAACTTGCCCAGAAAAACATATCTGCCACCTAAAATAAGACTTCAAAGTTCCAAGTTACCTCCTTTAACATGATGTAAGCCATAAAAGTTCCCAGGGCACACAAAAATTATGTTTTTTAATATTAGTTAAAAAGAAATATCAAAATCAAATGATGCAGAGGACCCAAGTTAGCTGCTGGCCTGCTGCTTAGGTAGCTAAAACTGAAAGCATTAAAGAAACAATTTATGACTTCGCCTATGATCTCTTCACCTACAATAAGGTATTCTGATCTGATTTTTTAAGGTTTGGTCTGAACTAGTCTCCTAATTTGACTAAAATTGTACCGTATATTTACGTTAATATATACAATGAAAGAAAAATTTCGAGTGGGATCTAGGTTTCTCCCAATGTATGATCTGGTCTAGTCTGATTTTTAACAAGAATAAGTAATAAGTTTCAGAAATAAGGTGAAGAGAAGAATTAGAGATGGTTATTCGAGAAATCGTGACTTGCAGATGGATTTGAAGAAGACAGTTGGGTGTGCAACAGTGCAAGTATGTTTGATCATAGATCTATATGGGGATCTCTGTGGAGAAATCGCTCGTCTCGAGTTCATCGTTGATGGTTAAATCAAGCTTTTACGACGAGATATCAAGTTCAACAAATTAGGCTCGGACGACGTGGGGGGTGGGGGTGGGGTGGGGGGGAGTTGTTAGGGGTACAACAATGAAATAAGAAGCCTCTTGGTATGGGTTGAGGGTTTGGAACTTGGAAGTGATGAGCTATGTTATTCTGGAATCTCGATATACCTCATTTGACTTGTATTAACCAGAAAGAGCACAGTTTTTCGCATAAGTGACGAATAAGTTGGGTTTTGATATCAACTACTAGGCGAGGTTAAAGATATTTCTGTGTTTGACTTGAAGATTCTACCTTGAAGTTCTGTTGCAGAAGATATTTTGCCATTTATTTGGTCTATTTATATGGCAGGTCACTTAGTTAATTCTAGCAGAGTAAACTGATATCTTCTAATTAATATGTAAGTTCCGCCTTTTATGAGAGCAAGTCCAAACTGTTTCAATTAGGCAGATTCTTCATCCAATGTTCCAAACTGTAAAAATTTGTTCAAAATAGTCTGTCCTGAACCGAGAAATACTGAGCTTCAGATCTATCCAAGAAATTGGTCACTTCTCTGCTTTGATGGCCAGTTTCCCTCCTTAATCCGTTAGAGGTTGTCATTATTGCTTGTGTTCCGTCTGAGTTGTGACCCAGCTTGTTTTCCTGAGGAACTTCAAAAGATCTTCTCCTTTTGAACTGTTGTTTCTTCCATCGCCTATCTGGAATCTTAGAGCCACTTAACATTCGAAGCAGTGCTGCATGCTATTTGTGTTCTTGTCACAATCTAGCTGGGGCTTTTGTTAAATTTGAATGTTTCTTTGAGGACCACATTTTGTATTTGAATCTAAGGTATAGAATTTCTAACACCAAATATCCACATTGTTGTTCTTGGAAAAAAATTGTATGCAATTCAATGCAACGAGTGCCATATCTTAGATTCCACTCTAGCAAGTTTGAGTAGTTGGCTGCTTGTTGATACTTCATAGTCGGCTTGTATTATTTTTGTAAAGAAGTAAAGGATCTAAAGTGAATAAAATTAACAAAAAGGGATCAATAGTGAAGGAGTAAGTGGAGATGAATCAGATGATGACGTATCAAAGGATTACGATAATTATTGTATCTCATTGACTGGGAAATGGGTGTTGTTCACGCTATCGGCACTGTTTTGGAGTCATTCATTAGCCTTGTGAACTGCTTTCCCCAAGCGAAAATCATATGGCTGCAAAACTAATTTCAAGAGAAAGTATTGTGTTGTCTGACCTTGGAAAGTTATTGTCTTATCGATCCACGGACCTATGAGGATGTTGTGGCTTGTAAGGGTGAAAGTTGTAGCAATAATTTCTTCATGCTATTTAGACCCCGAAATGAATCTCGTGATTATAATAAAATTTAAGTTTAACATTTATTGGCACCTGAATATGCATTTTATAATTTTTTGAATTTGCATAATGCAAATCCAGTTACTTAAAGAACTGCTTGGAAGGGCTGGCTCTCCTCCAGCCCAATAAAAGTTCCATCACTAAAATTTTCAATCAGGTACTCAGCTCAAACTTTGAGAGCTTCATTTAGTATTATGATGGAGGACATTGCTTATTTCCACTGACTTTGGTCAAGCCATTGCAAGATATATACTGTGGTCACATACTCTAATGAATCATGACTACCATGTGATTTTTTTTTTTTAAAGCTTTTGACTGTTAATTGCCTTGTCCTTCACCCTTGCAAATTGAAGGATAATATTGAATGGGTGAATGCACTAGGTAATACTCGCCTTGTTTCTGATAAAAGTGGTTAGTATGATTCCTTCCCAAGAAACTTAAAGAAAGTGTGTTGAGTTGATCTATATCTTAAGAGCAAGGGATACTTTGGAAAATAATTTATGGGTCTCTTATGGCACTTTACTCATTCTATGTGCTTATGTGGTGTCTACCTAAATGTTGATGATATCTCTGAGTAATTTTATCACAGTGAACATAATGTCTAGTGGCCTTGTTGTGCAACTGTTTTTTATACTGTAATTTTGTCAATTTGAGTTGTATTGGTGACTAAAGTATCTTTATTTGGCAGGTTCCACTTAACTTTGGTTATTACAGCAACAGTTTGCTGTTGGATGATGTAAGTCTAATTTCTTCCTTATTTCTTTCCTGTTTAACTGAAATAAAAGTAGCTTACTGGCTGAGTAACTTAAGTAAAAGCAGAAAATGCTGTACCAAACATGGAATATTGCGTTATATTTTTTTCCCCCCTTTCTATGTCATACTATTACGAATAGCACCATTGGCTATAAATCACTTCTAGACCTGCATTTCTTGCATGTAGAGTTGTTGGCTGTTCTATAGAGTTGCTGTAGACTGTAGATGGACGTACCAGGAACTATCATCTACATCACTATTGGCAATTGCTGCTTTGTTTCTTTTTCATTGAAGTTTTGGGGTAGACAAAACCAGGAGTATGCTGGAATAGGCTTTAGTTTAATGAGGGGAAATCTGTAAAAGAGGGGTTTGTATGGCTGGTTTTGCTATCTGGGGAAGGAGAGAAGGGGGAGGTACTGGGAGGTCAAATAGTGAGGCATGATGGTGGTAGTAATTCGCAGATATTTTGACAAATAGATTCCTGCTAAGTGCGATGGGGTGATGCCAGGTTTAGGGCATAGCTTTCTTGAAAGAGGGTCTTATATATTAGTGACATCTGGCAAAAGAACCGACTTCAGTTGGAAGGAAAAAAACAAACAAAAAATTTGATGGATTGCAGGGTGCAAAAAGCATGTTCCAACTATGTGACTTCCTTAAGAAAGATGATTAGTTTAGTACTCTAGTTTATCTTGTTCAGGAATCTCATGGGGAGATTGTTTCTGATTCTCAACATTTGTCTTGTGACCTCACCCTATAATTTGGATTCTCACTAAATGGTTTTGCTAGTTGTTGAAATTGTTGTCTAATTTATTAGGCAGTGAGTGCACCGTAGGAAAGGTCAGCTTGACTGACTACTAGAAGGAATTGGTGGTTAGAAATAGAGAGAATATATAGATTGGATGTGTGAAGGTATTTGTCGATACAAATGTACAAGTGCTAGTACGGTAGTACCCCACTTGCGCTAGTCCTTCCTCACATGGCACTGCATTTTTTAGTCCAGTGACGCTGGGAGACTTCATAATTTTCAGGTGATATAAGTTTTTATACAGCCATTGTCTGATTTTCTTTCCTTGGGTTTAACTCTGCGCTGTTAGAATCGTTGGATCTAGCAATGCTTTATCAACAAGGTATATAAACAAAATCCTTCAGGCTTCAGCTTAAATGGTCTGGTTTTTGTAGCTCTCTTATAGTCGCAAAAACTCATTTAGTCTTTCTTCTCAGAGTTTATTGACACTTGATTAATTATCAGAATATTCCTCAAAGAACCATTCAAATAACAAAACAAAGATGCTTCTACTGAAATATTATAGACAATTCTAGTCCTGGTTCACACAACTCCCCTCGGACAATCCAAAAGTAACTGCCCTAACACATTTGATAAAGCATAGTTACTTTTGGTTGATGGCCATCTTTGGGCTGATTACTTGCTAGAATGCAGTTTGAGCAATTTATTATCAGAAGAATTACGTGGTGGAAATGGTCAATTTCATTATATCAGTCTAGTATGCCCATCCTCTATCATCCTGTTCGGTATTTCCTTGCACTCGGTTATAAAACATTTGCTGCTCTGTTCTGTATTCCATTCAAAATATCTGTTATTTATTTAAAATCTGTTTTTGTGTAGGTGGGCAATTGTATATCTTGCGCAGATGAAGCCTCTCATTAACCCTATACTGAATGAAGCGGAGTGAAAATTAGAAAGAATGCTTCTCTAGATATCAAATCTTACCATTTTGCAGATTTTTCTGAGGAACTCATTCAGAGCCATATTCATGGCAGCGATTTCTCTCATGTGGATTTGTATGTAATTCTATTATGGCAGAGAATAACATATTCCTTATTTTTTTTTGTTTTAAATCTTCCCTTGTATTTTATGCACCAATCTACTTGTTCGAATGGATGATCTTCTTTGTGGATGAAATAATAATGAATTGGTGGAACACAACAATACAATTCCATTTTCGGTTATGAATCGATGAACCTACAATTCCAT AATACGACGAAGCTTCGAACAAGCGGACATTGATCGTAGATCACCGGAAAATCAAACTCGAATTGGGATTTTTTTGAGAATTTTTCCGGGGATTTAGTTTGATTGAATCCTCTCTCTGCGACCGAAGTCAGAGCAAAAGAGAGAAGTTTTGAGTGCAGAGATTAAAGATGGGGTTTTTCGTTACATCCCTGATTTTCCTGGTGATTGGGATTATTGCTTGTCTTTGTACCAGAATTTGCTTCAATCGGGGCCCTTCCACCAATCTGTTCCACTTAACTTTGGTTATTACAGCAACAGTTTGCTGTTGGATGATGTGGGCAATTGTATATCTTGCGCAGATGAAGCCTCTCATTAACCCTATACTGAATGAAGCGGAGTGAAAATTAGAAAGAATGCTTCTCTAGATATCAAATCTTACCATTTTGCAGATTTTTCTGAGGAACTCATTCAGAGCCATATTCATGGCAGCGATTTCTCTCATGTGGATTTGTATGTAATTCTATTATGGCAGAGAATAACATATTCCTTATTTTTTTTTGTTTTAAATCTTCCCTTGTATTTTATGCACCAATCTACTTGTTCGAATGGATGATCTTCTTTGTGGATGAAATAATAATGAATTGGTGGAACACAACAATACAATTCCATTTTCGGTTATGAATCGATGAACCTACAATTCCAT ATGGGGTTTTTCGTTACATCCCTGATTTTCCTGGTGATTGGGATTATTGCTTGTCTTTGTACCAGAATTTGCTTCAATCGGGGCCCTTCCACCAATCTGTTCCACTTAACTTTGGTTATTACAGCAACAGTTTGCTGTTGGATGATGTGGGCAATTGTATATCTTGCGCAGATGAAGCCTCTCATTAACCCTATACTGAATGAAGCGGAGTGA MGFFVTSLIFLVIGIIACLCTRICFNRGPSTNLFHLTLVITATVCCWMMWAIVYLAQMKPLINPILNEAE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08997.1 vs. NCBI nr
Match: gi|902195362|gb|KNA12811.1| (hypothetical protein SOVF_122530 [Spinacia oleracea]) HSP 1 Score: 144.4 bits (363), Expect = 7.300e-32 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1
BLAST of Spo08997.1 vs. NCBI nr
Match: gi|731355745|ref|XP_010689300.1| (PREDICTED: V-type proton ATPase subunit e2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 137.1 bits (344), Expect = 1.200e-29 Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 1
BLAST of Spo08997.1 vs. NCBI nr
Match: gi|26986112|emb|CAD27522.1| (vacuolar ATPase subunit e-like [Mesembryanthemum crystallinum]) HSP 1 Score: 132.5 bits (332), Expect = 2.900e-28 Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 1
BLAST of Spo08997.1 vs. NCBI nr
Match: gi|356567030|ref|XP_003551726.1| (PREDICTED: V-type proton ATPase subunit e1 [Glycine max]) HSP 1 Score: 131.3 bits (329), Expect = 6.400e-28 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 1
BLAST of Spo08997.1 vs. NCBI nr
Match: gi|502128904|ref|XP_004500119.1| (PREDICTED: V-type proton ATPase subunit e1 [Cicer arietinum]) HSP 1 Score: 131.0 bits (328), Expect = 8.400e-28 Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 1
BLAST of Spo08997.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REY6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_078920 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 5.100e-32 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1
BLAST of Spo08997.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EGV9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206620 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 8.100e-30 Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 1
BLAST of Spo08997.1 vs. UniProtKB/TrEMBL
Match: Q8GUB2_MESCR (Vacuolar ATPase subunit e-like OS=Mesembryanthemum crystallinum GN=vha-e PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.000e-28 Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 1
BLAST of Spo08997.1 vs. UniProtKB/TrEMBL
Match: A0A0R0F8V4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G089300 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.500e-28 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 1
BLAST of Spo08997.1 vs. UniProtKB/TrEMBL
Match: A0A151SBE7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025892 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.500e-28 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 1
BLAST of Spo08997.1 vs. ExPASy Swiss-Prot
Match: VA0E2_ARATH (V-type proton ATPase subunit e2 OS=Arabidopsis thaliana GN=VHA-e2 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.600e-26 Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1
BLAST of Spo08997.1 vs. ExPASy Swiss-Prot
Match: VA0E1_ARATH (V-type proton ATPase subunit e1 OS=Arabidopsis thaliana GN=VHA-e1 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 3.500e-26 Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 1
BLAST of Spo08997.1 vs. TAIR (Arabidopsis)
Match: AT4G26710.1 (ATPase, V0 complex, subunit E) HSP 1 Score: 119.4 bits (298), Expect = 8.900e-28 Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1
BLAST of Spo08997.1 vs. TAIR (Arabidopsis)
Match: AT5G55290.1 (ATPase, V0 complex, subunit E) HSP 1 Score: 118.2 bits (295), Expect = 2.000e-27 Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08997.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo08997.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo08997.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2 Position : 0 Zoom : x 1
BLAST of Spo08997.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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