Spo09019 (gene)

Overview
NameSpo09019
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPeptide deformylase 1A
LocationSpoScf_02917 : 24926 .. 28596 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGAGTGGGGGGTGCTTGTGCCATTTCCAATTAGAAATTCTTTACTCGCATAAAAATAGATTTTGAAACAGATTCTTCAATTTCTTGTGAGCTTCTTCAGTAAGGCAGCCATAACCACAAGGTCCACAACAATGGAGGCAATTCCCCGCTTCTCCAACCGCCTCCTTTCTCTCTCCTCCATCAACCCCAACACTAAATCCCTCATCACTCCTTTTCTCCGCCTCCAATTATCACAAATTCCCACATTTAACCAATTACCCATTTCCCCAAACCCGCTTAAAACCACCCGTTTTTTCCTCAGCACAAAAACCCTCAACCCTTCTTCTCCACCCTCCACATCAATAACCCGGGCAGGTTGGTTACTGGGTCTTGGTAACAATAAGCGGCAGAAGCAGTTGCCCGACTTGGTTAAAGCGGGTGACCCAGTTCTCCATGAAGCTGCCCGAGAAGTTGACCCTAAAGATATCGGGTCGGAAAAGATCCAAAAGATAATTGATGATATGATTGGGGTTATGAGGATGGCCCCTGGAGTTGGACTTGCTGCTCCCCAAATTGGTATCCCTTTAAAGGTTGCTTCTTTTACTTGGAACTTTTTCATTTTATTTGGATTGTTTGGTTGTGATGTTTATGTAGGTTTGCTCAATATTTTTGGTTTGTTTGTTGTATTGGGATTTGGGAATGGCAAAGGGTAATGATTGCTTGATAATTGTGTGTTATTTTGATATTTTGGAAACAATGTTACACTAGTTTTAGCTCGTTAGGATAAATTTGCGTACATTTGGACTGCACAAATTCTTGTTGAATATGGATGGTGTTGTAATGTTTGCACTAGTTTTTGATTGTACATCTGAATTCTTCAATATTTTTTGTTAATGATGCTTGAAGTTTTCTGGAGGTGCTAAATTAGAAGAATGTGATAGGATCATAGGAGTAAGTAGAAGTTACACTTTGTTCGAACTTGAATATTTGAGTTTTTGATGATTACACTTTAATCTTAAATCAAAGTTTGATAAGATTTATATGAGAAATGGTAAGCTTCATTTGACATAAAATGTGGAAGTCAAAGAATATAGGAGTATAGTTTTTTTCTACAATGGGGGCAATTGGACATGGTATAACTATATAAGTGTATGCACTTATGTAAGATATTGAATTTATGTTGACATTTGAGGATAGTGATGGTTTGTTCAAGTTCTCAGTTAAGTTGAATTTTGAAGAGTGGTGATTTTTGGATAGATGTTTGTTGAGGAATTAATGGTATGATTGATTAAGCTGATCAAAGTGCATGGGGAATTTACTACTAAGCATAAAGATTTGTTGATGAAATCATAAATTTTTTGTCATTTCTGTGTTTCTTCACTCGGGAAATAAATTTTGGCCTTCCAAATTGCACGAGTTCTACGAAAAATGATATGCTAGAGAATTCAAGGGTAAAAGACTTACTAATTTATTTCGGTTTTGAGACAAGAATAGTGAAATCAACATCAGTTTTGACCTGAGAGAGTTGACTGATTTTGATTTTGCCACTATGGAGTTTGAACAAAAATATGTTTCTTGTCTGAAAATCTGAATTCACATCCTGAATTTCCTGATTGCCTCTAATACCTTTTCATCTTTGTGTAGATTATTGTGTTGGAAGATACAAAAGAGTTCATCAGTTATGCGCCAAAAGAGGAAATCAAAGCACAAGATAGACGCCCTTTTGATCTTCTGGTATGATTGACGTCAAAGAAAATTCAAAACGGATGAAGGGTTTTCCCTTTTGGTTTCTGTTCCTTCTAAATTCCACCAAATGCAAAGTTTTCTCCATATATTGACAAGCTCTTAGATTTGAGGCAGGTTATCGTGAATCCAGTATTGAAAAAGAAGAGCAACAAAACGGCGCTTTTCTTTGAAGGCTGCCTGAGGTATGAGTCATTACCTTAATTTTTATTTTTAGTATAAGCATTTGTCGCAATAGACTAGGATCATTTCCGCCAAATGCTCTGTCACATACTCACATCTTGCAACTCCTTTATTTGACTATATGTGCTATATGTGGTGGCAATGGCATAGGAGCTGTTTTTTATTGCAAAGATACTCAATTTATGCATACGCAAATAATTAGTTGACTTCCTTTGCAATATTAGGGTTTTGGGAGGAAAATCTAGCACCATTACCTTGTTTTTCGTAATTGCTCCAGTTACTTATTGGTCAGCAGAATAATGTCTCGTACGCTATATTTTCCTTCATGAAAATTTTTGAGGGAGGATGAAAGAAGAATGGAGGACTCAAATTTCTTTCTTATTTCTGAAGTGTAGGTACATATTCCAGGGTAGTGTCAAATTCCCTGCATTTTTCAGGCACAGTGAAACCTGTTTGCCTGAAGAATACTCCCTTTGTTCCTAAATGTTCTCCCAATTTCACTTTGACACATTTGCCAATGCACATTTTGCATCGTTAATATTGTTAAAGTACTCATTGAGATGAATCAAACAAGACCCCACATAACTATATTTTTTCTTATATAATGGTAGTAATTCAAAAGATTATCTTCAATTGTGAATAGTGACAAGATTTCAAATGGGAAGAACATTAAGGAACAGAAGGAATATATCTTTTGTCAAATGGCAATACCTGTGACGGGACATTTATGTCTTCAGATGTAGCATAAGTTGAAAGAAAGCATGCTGCCCATAATTGTTCCGTGGCGTAGCAACTTTGGTTTTTGAATTTGATATAGTTTTTTCCTGCTAAATGGTGCTACCAAAACTCGAGATACAGTATTATGCTGATTCTAAAAACTTCAATAATTTTAACAGTGTTGATGGATATAGAGCGGTTGTGGAGAGAAGCCTTGATGTCGAAGTCAAAGGATTGGATCGATATGGGCAGCCCGTAAAAGTGGACGCTTCAGGATGGCAGGCCCGTATTCTTCAGCACGAGTGTGACCATTTGGAGGGTACTCTTTATGTGGACAGGATGGCACCAAAGACATTCAGAACTGTTGAAAACTTAGATTTACCTCTTGCAGTTGGCTGTCCGAAGCTTGGGGCACGCTAGTTTTCATCTTGAAAGATTAGCCTAGCCAAATGGAGGATTTTATCACCAAGAATTTTGGTGAAATTAGGTTCAGAATTTTCTAGGGGAACCAATACTCATGTTGATTATTTTCATATTGATTACGAGTACATGTTACATTTTATATTTAGACTCCGTTCTATTCGACTTATTTTGCCTGAACTTATATTATCTGAACTTATCTGATCTTAACTAAACTTATTTTGTCTAAAATATGTCAAAATAAGTCGACATAACCATTTATTCCCAGGATATTACATCTACTATCTCTTTTGGCAGGGTAACATCAGTTTGAATGATTATTATGGTTTGTTGGTTTACAATCTACCTCTTCTAAAATCTGTAATGACTTCCTTTGATGCAGGGAAATTCTCCTGTAGGCTGTTATGCGTTCACGAACGTTGAAATTTACGAGGAATTGTTTTCTTTGCATGGCCGGCAAACTTATGAGAAATTCTTTTATTTGAATTGATTGATTTTAAGCAAAATTATTGATTTACAGGCTTAACATCTCCTTATTGTATCATTGTATGAAACTGGCGTTTCTTCGCTCCCATTTCCATTATGTGCACCATTGTTGACTTCTATCGCGTGCTTTGTCAAAGCCAGAA

mRNA sequence

TAGAGTGGGGGGTGCTTGTGCCATTTCCAATTAGAAATTCTTTACTCGCATAAAAATAGATTTTGAAACAGATTCTTCAATTTCTTGTGAGCTTCTTCAGTAAGGCAGCCATAACCACAAGGTCCACAACAATGGAGGCAATTCCCCGCTTCTCCAACCGCCTCCTTTCTCTCTCCTCCATCAACCCCAACACTAAATCCCTCATCACTCCTTTTCTCCGCCTCCAATTATCACAAATTCCCACATTTAACCAATTACCCATTTCCCCAAACCCGCTTAAAACCACCCGTTTTTTCCTCAGCACAAAAACCCTCAACCCTTCTTCTCCACCCTCCACATCAATAACCCGGGCAGGTTGGTTACTGGGTCTTGGTAACAATAAGCGGCAGAAGCAGTTGCCCGACTTGGTTAAAGCGGGTGACCCAGTTCTCCATGAAGCTGCCCGAGAAGTTGACCCTAAAGATATCGGGTCGGAAAAGATCCAAAAGATAATTGATGATATGATTGGGGTTATGAGGATGGCCCCTGGAGTTGGACTTGCTGCTCCCCAAATTGGTATCCCTTTAAAGATTATTGTGTTGGAAGATACAAAAGAGTTCATCAGTTATGCGCCAAAAGAGGAAATCAAAGCACAAGATAGACGCCCTTTTGATCTTCTGGTTATCGTGAATCCAGTATTGAAAAAGAAGAGCAACAAAACGGCGCTTTTCTTTGAAGGCTGCCTGAGTGTTGATGGATATAGAGCGGTTGTGGAGAGAAGCCTTGATGTCGAAGTCAAAGGATTGGATCGATATGGGCAGCCCGTAAAAGTGGACGCTTCAGGATGGCAGGCCCGTATTCTTCAGCACGAGTGTGACCATTTGGAGGGTACTCTTTATGTGGACAGGATGGCACCAAAGACATTCAGAACTGTTGAAAACTTAGATTTACCTCTTGCAGTTGGCTGTCCGAAGCTTGGGGCACGCTAGTTTTCATCTTGAAAGATTAGCCTAGCCAAATGGAGGATTTTATCACCAAGAATTTTGGTGAAATTAGGGAAATTCTCCTGTAGGCTGTTATGCGTTCACGAACGTTGAAATTTACGAGGAATTGTTTTCTTTGCATGGCCGGCAAACTTATGAGAAATTCTTTTATTTGAATTGATTGATTTTAAGCAAAATTATTGATTTACAGGCTTAACATCTCCTTATTGTATCATTGTATGAAACTGGCGTTTCTTCGCTCCCATTTCCATTATGTGCACCATTGTTGACTTCTATCGCGTGCTTTGTCAAAGCCAGAA

Coding sequence (CDS)

ATGGAGGCAATTCCCCGCTTCTCCAACCGCCTCCTTTCTCTCTCCTCCATCAACCCCAACACTAAATCCCTCATCACTCCTTTTCTCCGCCTCCAATTATCACAAATTCCCACATTTAACCAATTACCCATTTCCCCAAACCCGCTTAAAACCACCCGTTTTTTCCTCAGCACAAAAACCCTCAACCCTTCTTCTCCACCCTCCACATCAATAACCCGGGCAGGTTGGTTACTGGGTCTTGGTAACAATAAGCGGCAGAAGCAGTTGCCCGACTTGGTTAAAGCGGGTGACCCAGTTCTCCATGAAGCTGCCCGAGAAGTTGACCCTAAAGATATCGGGTCGGAAAAGATCCAAAAGATAATTGATGATATGATTGGGGTTATGAGGATGGCCCCTGGAGTTGGACTTGCTGCTCCCCAAATTGGTATCCCTTTAAAGATTATTGTGTTGGAAGATACAAAAGAGTTCATCAGTTATGCGCCAAAAGAGGAAATCAAAGCACAAGATAGACGCCCTTTTGATCTTCTGGTTATCGTGAATCCAGTATTGAAAAAGAAGAGCAACAAAACGGCGCTTTTCTTTGAAGGCTGCCTGAGTGTTGATGGATATAGAGCGGTTGTGGAGAGAAGCCTTGATGTCGAAGTCAAAGGATTGGATCGATATGGGCAGCCCGTAAAAGTGGACGCTTCAGGATGGCAGGCCCGTATTCTTCAGCACGAGTGTGACCATTTGGAGGGTACTCTTTATGTGGACAGGATGGCACCAAAGACATTCAGAACTGTTGAAAACTTAGATTTACCTCTTGCAGTTGGCTGTCCGAAGCTTGGGGCACGCTAG

Protein sequence

MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKTLNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09019.1Spo09019.1mRNA


Homology
[Close]
BLAST of Spo09019.1 vs. NCBI nr
Match: gi|902185841|gb|KNA10561.1| (hypothetical protein SOVF_143200 [Spinacia oleracea])

HSP 1 Score: 553.9 bits (1426), Expect = 1.600e-154
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKT 60
           MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKT
Sbjct: 1   MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKT 60

Query: 61  LNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKI 120
           LNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKI
Sbjct: 61  LNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKI 120

Query: 121 IDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVN 180
           IDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVN
Sbjct: 121 IDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVN 180

Query: 181 PVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHE 240
           PVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHE
Sbjct: 181 PVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHE 240

Query: 241 CDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           CDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR
Sbjct: 241 CDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 278
[Close]
BLAST of Spo09019.1 vs. NCBI nr
Match: gi|731359232|ref|XP_010691172.1| (PREDICTED: peptide deformylase 1A, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 422.9 bits (1086), Expect = 4.200e-115
Identity = 219/278 (78.78%), Postives = 231/278 (83.09%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKT 60
           ME IPR SNRL          KSLI P L    S IP  N LPI+PNP+K T F  +T+T
Sbjct: 1   MEVIPRLSNRLFF--------KSLINPILHFHHSPIPASNFLPINPNPIKITHFLHTTRT 60

Query: 61  LNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKI 120
           LN S   S   +RAGWLLGLG  K+QK LPDLVKAGDPVLHEAAR VDPK+IGSEKIQKI
Sbjct: 61  LNSSPSSSRLTSRAGWLLGLGEKKQQK-LPDLVKAGDPVLHEAARIVDPKEIGSEKIQKI 120

Query: 121 IDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVN 180
           IDDMI VMR APGVGLAAPQIGIPLKIIVLEDTKE+ISYAPK EIKAQDRRPF+LLVIVN
Sbjct: 121 IDDMIDVMRKAPGVGLAAPQIGIPLKIIVLEDTKEYISYAPKVEIKAQDRRPFELLVIVN 180

Query: 181 PVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHE 240
           PVLKKK NK ALFFEGCLSVDGYRAVVERSLDVEV GLDRYGQ + VDASGWQARILQHE
Sbjct: 181 PVLKKKGNKAALFFEGCLSVDGYRAVVERSLDVEVSGLDRYGQHITVDASGWQARILQHE 240

Query: 241 CDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           CDHLEGTLYVD+M PKTFRTVENLDLPLAVGCP+LG R
Sbjct: 241 CDHLEGTLYVDKMEPKTFRTVENLDLPLAVGCPELGVR 269
[Close]
BLAST of Spo09019.1 vs. NCBI nr
Match: gi|703094699|ref|XP_010095337.1| (Peptide deformylase 1A [Morus notabilis])

HSP 1 Score: 376.7 bits (966), Expect = 3.500e-101
Identity = 200/281 (71.17%), Postives = 225/281 (80.07%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTK-SLITPFLRLQLSQIPTFNQLPIS--PNPLKTTRFFLS 60
           ME   RFS RL  L     + + S++TP LR    + P F  L     PN + TTR    
Sbjct: 4   METAHRFSLRLFPLLQSERSLRPSILTPILRN--CRTPIFGHLDPKQPPNAIFTTR---- 63

Query: 61  TKTLNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKI 120
            +T +P SP   S+ RAGWLLGLG  K++  LPD+VKAGDPVLHE AREV+P +IGS+KI
Sbjct: 64  -RTYSPRSP---SMARAGWLLGLGE-KKKTSLPDIVKAGDPVLHEPAREVEPGEIGSDKI 123

Query: 121 QKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLV 180
           QKIIDDMI  MR APGVGLAAPQIGIPL+IIVLEDTKE+ISYAPKEEIKAQDRRPFDLLV
Sbjct: 124 QKIIDDMISSMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLV 183

Query: 181 IVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARIL 240
           I+NP LKKKSNKTALFFEGCLSVDG+RAVVER LDVEV GLDRYG PVK++ASGWQARIL
Sbjct: 184 IINPKLKKKSNKTALFFEGCLSVDGFRAVVERYLDVEVDGLDRYGNPVKINASGWQARIL 243

Query: 241 QHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           QHECDHLEGT+YVD+M P+TFRTV+NLDLPLA GCPKLG R
Sbjct: 244 QHECDHLEGTIYVDKMVPRTFRTVDNLDLPLADGCPKLGVR 273
[Close]
BLAST of Spo09019.1 vs. NCBI nr
Match: gi|645277304|ref|XP_008243708.1| (PREDICTED: peptide deformylase 1A, chloroplastic/mitochondrial [Prunus mume])

HSP 1 Score: 369.4 bits (947), Expect = 5.500e-99
Identity = 192/282 (68.09%), Postives = 219/282 (77.66%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLS----SINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFL 60
           ME I RFS RL  +S     + P +   ITP  R   ++I   N  P +P P   T F  
Sbjct: 1   METIYRFSLRLAPISFAEKCLQPRS---ITPIFRK--TRIHFLNPGPQNPEPAFNTHF-- 60

Query: 61  STKTLNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEK 120
              T    S  S+ + +AGWLLGLG  K+   LPD+VKAGDPVLHE AR+V+P DIGSE+
Sbjct: 61  --PTRKSYSSGSSPVAKAGWLLGLGEKKKSTSLPDIVKAGDPVLHEPARDVEPGDIGSER 120

Query: 121 IQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLL 180
           IQKIIDDM+ VMR APGVGLAAPQIGIPL+IIVLEDTKE+ISYAPKEE  AQDRRPFDLL
Sbjct: 121 IQKIIDDMVKVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEETAAQDRRPFDLL 180

Query: 181 VIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARI 240
           VI+NP L+KKSN+TA+FFEGCLSVDG+RAVVER+LDVEV G DR GQP+K+ ASGWQARI
Sbjct: 181 VILNPKLQKKSNRTAVFFEGCLSVDGFRAVVERNLDVEVSGFDRNGQPIKISASGWQARI 240

Query: 241 LQHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           LQHECDHLEGTLYVD+M P+TFRTVENLDLPLA GCPKLG R
Sbjct: 241 LQHECDHLEGTLYVDKMVPRTFRTVENLDLPLAEGCPKLGGR 273
[Close]
BLAST of Spo09019.1 vs. NCBI nr
Match: gi|778689503|ref|XP_004152208.2| (PREDICTED: peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 2.800e-98
Identity = 197/281 (70.11%), Postives = 216/281 (76.87%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQL---PISPNPLKTTRFFLS 60
           MEAI RFS RL  +S      K  + P         P F +L   PIS +P    +F   
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLP---------PNFRKLIHRPISSSP-NIPKFIPV 60

Query: 61  TKTLNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKI 120
            KT + SS   TSI +AGW LGLG  K+   LP +VKAGDPVLHE AREVDPK+IGSEK+
Sbjct: 61  PKTYSSSS---TSIAKAGWFLGLGEQKKMS-LPSIVKAGDPVLHEPAREVDPKEIGSEKV 120

Query: 121 QKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLV 180
           QKIIDDMI  MR APGVGLAAPQIGIPL+IIVLEDTKE+ISYAPKEEIKAQDRR FDLLV
Sbjct: 121 QKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLV 180

Query: 181 IVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARIL 240
           I+NP LK KSNKTALFFEGCLSVDG+RAVVER LDVEV G DR G P+KVDASGWQARIL
Sbjct: 181 IINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARIL 240

Query: 241 QHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           QHECDHL+GTLYVD+M P+TFRT ENL LPLA GCPKLGAR
Sbjct: 241 QHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267
[Close]
BLAST of Spo09019.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVL9_SPIOL (Peptide deformylase OS=Spinacia oleracea GN=SOVF_143200 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.100e-154
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKT 60
           MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKT
Sbjct: 1   MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKT 60

Query: 61  LNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKI 120
           LNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKI
Sbjct: 61  LNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKI 120

Query: 121 IDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVN 180
           IDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVN
Sbjct: 121 IDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVN 180

Query: 181 PVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHE 240
           PVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHE
Sbjct: 181 PVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHE 240

Query: 241 CDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           CDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR
Sbjct: 241 CDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 278
[Close]
BLAST of Spo09019.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BKX1_BETVU (Peptide deformylase OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g219820 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.900e-115
Identity = 219/278 (78.78%), Postives = 231/278 (83.09%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTKT 60
           ME IPR SNRL          KSLI P L    S IP  N LPI+PNP+K T F  +T+T
Sbjct: 1   MEVIPRLSNRLFF--------KSLINPILHFHHSPIPASNFLPINPNPIKITHFLHTTRT 60

Query: 61  LNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQKI 120
           LN S   S   +RAGWLLGLG  K+QK LPDLVKAGDPVLHEAAR VDPK+IGSEKIQKI
Sbjct: 61  LNSSPSSSRLTSRAGWLLGLGEKKQQK-LPDLVKAGDPVLHEAARIVDPKEIGSEKIQKI 120

Query: 121 IDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIVN 180
           IDDMI VMR APGVGLAAPQIGIPLKIIVLEDTKE+ISYAPK EIKAQDRRPF+LLVIVN
Sbjct: 121 IDDMIDVMRKAPGVGLAAPQIGIPLKIIVLEDTKEYISYAPKVEIKAQDRRPFELLVIVN 180

Query: 181 PVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQHE 240
           PVLKKK NK ALFFEGCLSVDGYRAVVERSLDVEV GLDRYGQ + VDASGWQARILQHE
Sbjct: 181 PVLKKKGNKAALFFEGCLSVDGYRAVVERSLDVEVSGLDRYGQHITVDASGWQARILQHE 240

Query: 241 CDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           CDHLEGTLYVD+M PKTFRTVENLDLPLAVGCP+LG R
Sbjct: 241 CDHLEGTLYVDKMEPKTFRTVENLDLPLAVGCPELGVR 269
[Close]
BLAST of Spo09019.1 vs. UniProtKB/TrEMBL
Match: W9SLQ8_9ROSA (Peptide deformylase OS=Morus notabilis GN=L484_000464 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.400e-101
Identity = 200/281 (71.17%), Postives = 225/281 (80.07%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTK-SLITPFLRLQLSQIPTFNQLPIS--PNPLKTTRFFLS 60
           ME   RFS RL  L     + + S++TP LR    + P F  L     PN + TTR    
Sbjct: 4   METAHRFSLRLFPLLQSERSLRPSILTPILRN--CRTPIFGHLDPKQPPNAIFTTR---- 63

Query: 61  TKTLNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKI 120
            +T +P SP   S+ RAGWLLGLG  K++  LPD+VKAGDPVLHE AREV+P +IGS+KI
Sbjct: 64  -RTYSPRSP---SMARAGWLLGLGE-KKKTSLPDIVKAGDPVLHEPAREVEPGEIGSDKI 123

Query: 121 QKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLV 180
           QKIIDDMI  MR APGVGLAAPQIGIPL+IIVLEDTKE+ISYAPKEEIKAQDRRPFDLLV
Sbjct: 124 QKIIDDMISSMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLV 183

Query: 181 IVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARIL 240
           I+NP LKKKSNKTALFFEGCLSVDG+RAVVER LDVEV GLDRYG PVK++ASGWQARIL
Sbjct: 184 IINPKLKKKSNKTALFFEGCLSVDGFRAVVERYLDVEVDGLDRYGNPVKINASGWQARIL 243

Query: 241 QHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           QHECDHLEGT+YVD+M P+TFRTV+NLDLPLA GCPKLG R
Sbjct: 244 QHECDHLEGTIYVDKMVPRTFRTVDNLDLPLADGCPKLGVR 273
[Close]
BLAST of Spo09019.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KWR7_CUCSA (Peptide deformylase OS=Cucumis sativus GN=Csa_4G004880 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.900e-98
Identity = 197/281 (70.11%), Postives = 216/281 (76.87%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTKSLITPFLRLQLSQIPTFNQL---PISPNPLKTTRFFLS 60
           MEAI RFS RL  +S      K  + P         P F +L   PIS +P    +F   
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLP---------PNFRKLIHRPISSSP-NIPKFIPV 60

Query: 61  TKTLNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKI 120
            KT + SS   TSI +AGW LGLG  K+   LP +VKAGDPVLHE AREVDPK+IGSEK+
Sbjct: 61  PKTYSSSS---TSIAKAGWFLGLGEQKKMS-LPSIVKAGDPVLHEPAREVDPKEIGSEKV 120

Query: 121 QKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLV 180
           QKIIDDMI  MR APGVGLAAPQIGIPL+IIVLEDTKE+ISYAPKEEIKAQDRR FDLLV
Sbjct: 121 QKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLV 180

Query: 181 IVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARIL 240
           I+NP LK KSNKTALFFEGCLSVDG+RAVVER LDVEV G DR G P+KVDASGWQARIL
Sbjct: 181 IINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARIL 240

Query: 241 QHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           QHECDHL+GTLYVD+M P+TFRT ENL LPLA GCPKLGAR
Sbjct: 241 QHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267
[Close]
BLAST of Spo09019.1 vs. UniProtKB/TrEMBL
Match: B9RV35_RICCO (Peptide deformylase OS=Ricinus communis GN=RCOM_0898810 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.500e-98
Identity = 192/279 (68.82%), Postives = 221/279 (79.21%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTK-SLITPFLRLQLSQIPTFNQLPISPNPLKTTRFFLSTK 60
           ME + RFS RLL +S  +   K +   P  RL         ++PIS    +TT  +  T+
Sbjct: 1   METLHRFSLRLLPISLADKCLKPTKHHPIYRL--------TRIPISKPDFRTTIPYSITR 60

Query: 61  TLNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSEKIQK 120
                S  S+SI +AGWLLGLG NK+   LPD+VKAGDPVLHE AREVDP +IGSE+IQK
Sbjct: 61  ----KSLSSSSIAKAGWLLGLGENKKMS-LPDIVKAGDPVLHEPAREVDPDEIGSERIQK 120

Query: 121 IIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDLLVIV 180
           IIDDM+ VMR APGVGLAAPQIG+PL+IIVLEDT E+I YAPKEE KAQDRRPFDLLVI+
Sbjct: 121 IIDDMVKVMRRAPGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKEETKAQDRRPFDLLVIL 180

Query: 181 NPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQARILQH 240
           NP LKKK N+TALFFEGCLSVDG+RAVVERSL+VEV GLDR GQP+KVDASGWQARILQH
Sbjct: 181 NPKLKKKGNRTALFFEGCLSVDGFRAVVERSLEVEVSGLDRSGQPIKVDASGWQARILQH 240

Query: 241 ECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLGAR 279
           ECDHL+GTLYVD+M P+TFRTV+NLDLPLA GCP LGA+
Sbjct: 241 ECDHLDGTLYVDKMVPRTFRTVDNLDLPLAEGCPNLGAQ 266
[Close]
BLAST of Spo09019.1 vs. ExPASy Swiss-Prot
Match: DEF1A_SOLLC (Peptide deformylase 1A, chloroplastic OS=Solanum lycopersicum GN=PDF1A PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 7.800e-93
Identity = 181/282 (64.18%), Postives = 215/282 (76.24%), Query Frame = 1 

		  

Query: 1   MEAIPRFSNRLLSLSSINPNTKS------LITPFLRLQLSQIPTFNQLPISPNPLKTTRF 60
           ME  PR + R+LS+       KS      L +  ++L+ SQ P F Q  +   P   T  
Sbjct: 2   MERFPRLAQRVLSVPFTPKYLKSCKKTNPLTSHLMQLRGSQRPIFIQWNLQGRPSVCTDL 61

Query: 61  FLSTKTLNPSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGS 120
            +S K        S++  RAGW LGLG  K+Q  +PD+VKAGDPVLHE ++++  ++IGS
Sbjct: 62  -ISKKNY------SSATARAGWFLGLGEKKKQA-MPDIVKAGDPVLHEPSQDIPLEEIGS 121

Query: 121 EKIQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFD 180
           E+IQKII++M+ VMR APGVGLAAPQIGIPLKIIVLEDT E+ISYAPK+E KAQDRRPF 
Sbjct: 122 ERIQKIIEEMVKVMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFG 181

Query: 181 LLVIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQA 240
           LLVI+NP LKKK NKTALFFEGCLSVDG+RAVVER L+VEV GLDR G+ +KVDASGWQA
Sbjct: 182 LLVIINPKLKKKGNKTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQA 241

Query: 241 RILQHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLG 277
           RILQHE DHL+GTLYVD+MAP+TFRTVENLDLPLA GCPKLG
Sbjct: 242 RILQHEYDHLDGTLYVDKMAPRTFRTVENLDLPLAAGCPKLG 275
[Close]
BLAST of Spo09019.1 vs. ExPASy Swiss-Prot
Match: DEF1A_ARATH (Peptide deformylase 1A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PDF1A PE=1 SV=3)

HSP 1 Score: 336.7 bits (862), Expect = 2.500e-91
Identity = 163/222 (73.42%), Postives = 193/222 (86.94%), Query Frame = 1 

		  

Query: 56  LSTKTLN-PSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGS 115
           L+ K  N P+S  S+  T+AGWLLGLG  K++  LP++V +GDPVLHE AREVDP +IGS
Sbjct: 46  LNRKLYNLPTSSSSSLSTKAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGS 105

Query: 116 EKIQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFD 175
           E+IQKIIDDMI VMR+APGVGLAAPQIG+PL+IIVLEDTKE+ISYAPKEEI AQ+RR FD
Sbjct: 106 ERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFD 165

Query: 176 LLVIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQA 235
           L+V+VNPVLK++SNK ALFFEGCLSVDG+RA VER L+V V G DR G+ ++V+ASGWQA
Sbjct: 166 LMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQA 225

Query: 236 RILQHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLG 277
           RILQHECDHL+G LYVD+M P+TFRTV+NLDLPLA GCPKLG
Sbjct: 226 RILQHECDHLDGNLYVDKMVPRTFRTVDNLDLPLAEGCPKLG 267
[Close]
BLAST of Spo09019.1 vs. ExPASy Swiss-Prot
Match: DEF1A_ORYSJ (Peptide deformylase 1A, chloroplastic OS=Oryza sativa subsp. japonica GN=PDF1A PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 8.600e-84
Identity = 160/248 (64.52%), Postives = 186/248 (75.00%), Query Frame = 1 

		  

Query: 42  LPISPNPLKTTRFFLSTKTLNPSSPPSTSITRA----GWLLGLGNNK-------RQKQLP 101
           L +SP     T    S +  +P     +S+  +    GWL GL   K            P
Sbjct: 13  LLLSPAAPLPTAVAASARRASPGGRRWSSVRASAGGGGWLSGLLGGKGGGGAPTAMTVTP 72

Query: 102 DLVKAGDPVLHEAAREVDPKDIGSEKIQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVL 161
             VKAGDPVLHE A++V P DI SEK+Q +ID M+ VMR APGVGLAAPQIG+PLKIIVL
Sbjct: 73  GTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAVMRKAPGVGLAAPQIGVPLKIIVL 132

Query: 162 EDTKEFISYAPKEEIKAQDRRPFDLLVIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERS 221
           EDT+E+ISYAPK++I+AQDRRPFDLLVI+NP LK  S +TALFFEGCLSVDGYRA+VER 
Sbjct: 133 EDTQEYISYAPKKDIEAQDRRPFDLLVIINPKLKTTSKRTALFFEGCLSVDGYRALVERH 192

Query: 222 LDVEVKGLDRYGQPVKVDASGWQARILQHECDHLEGTLYVDRMAPKTFRTVENLDLPLAV 279
           LDVEV GLDR G+P+KV+ASGWQARILQHECDHLEGTLYVD M P+TFR V+NLDLPL V
Sbjct: 193 LDVEVSGLDRNGRPIKVEASGWQARILQHECDHLEGTLYVDTMVPRTFRIVDNLDLPLPV 252
[Close]
BLAST of Spo09019.1 vs. ExPASy Swiss-Prot
Match: DEF1_GLOVI (Peptide deformylase 1 OS=Gloeobacter violaceus (strain PCC 7421) GN=def1 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.100e-41
Identity = 84/175 (48.00%), Postives = 117/175 (66.86%), Query Frame = 1 

		  

Query: 91  DLVKAGDPVLHEAAREVDPKDIGSEKIQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVL 150
           ++VK GDPVL   A+ ++  +I SE IQ++I  M   MR APGVGLAAPQ+G+ ++++V+
Sbjct: 47  EIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLVVI 106

Query: 151 EDTKEFISYAPKEEIKAQDRRPFDLLVIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERS 210
           ED  E+I      E + ++R P    V++NPVL  +  ++A+FFEGCLS+ GY+ +V R+
Sbjct: 107 EDRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLVARA 166

Query: 211 LDVEVKGLDRYGQPVKVDASGWQARILQHECDHLEGTLYVDRMAPKTFRTVENLD 266
             V V+ LD    PV + A GW ARILQHE DHL G L VDRM  +TF T+EN D
Sbjct: 167 RVVRVEALDERAAPVVIRAHGWYARILQHEIDHLNGLLCVDRMDLQTFSTLENYD 221
[Close]
BLAST of Spo09019.1 vs. ExPASy Swiss-Prot
Match: DEFM_HUMAN (Peptide deformylase, mitochondrial OS=Homo sapiens GN=PDF PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-30
Identity = 73/206 (35.44%), Postives = 110/206 (53.40%), Query Frame = 1 

		  

Query: 58  TKTLNPSSPPSTSITRAGW--LLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGSE 117
           + T  P      ++ R+ W  L  L     +     + + GDPVL   A  V+   +G  
Sbjct: 31  SSTAAPDGVEGPALRRSYWRHLRRLVLGPPEPPFSHVCQVGDPVLRGVAAPVERAQLGGP 90

Query: 118 KIQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFDL 177
           ++Q++   ++ VMR    VGL+APQ+G+P +++ LE  +      P  +   +   PF L
Sbjct: 91  ELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQVLALELPEALCRECPPRQRALRQMEPFPL 150

Query: 178 LVIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQAR 237
            V VNP L+   ++   F EGC SV G+ A V R   V++ GLD  G+ V   ASGW AR
Sbjct: 151 RVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAVQISGLDPNGEQVVWQASGWAAR 210

Query: 238 ILQHECDHLEGTLYVDRMAPKTFRTV 262
           I+QHE DHL+G L++D+M  +TF  V
Sbjct: 211 IIQHEMDHLQGCLFIDKMDSRTFTNV 236
[Close]
BLAST of Spo09019.1 vs. TAIR (Arabidopsis)
Match: AT1G15390.1 (peptide deformylase 1A)

HSP 1 Score: 336.7 bits (862), Expect = 1.400e-92
Identity = 163/222 (73.42%), Postives = 193/222 (86.94%), Query Frame = 1 

		  

Query: 56  LSTKTLN-PSSPPSTSITRAGWLLGLGNNKRQKQLPDLVKAGDPVLHEAAREVDPKDIGS 115
           L+ K  N P+S  S+  T+AGWLLGLG  K++  LP++V +GDPVLHE AREVDP +IGS
Sbjct: 46  LNRKLYNLPTSSSSSLSTKAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGS 105

Query: 116 EKIQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAPKEEIKAQDRRPFD 175
           E+IQKIIDDMI VMR+APGVGLAAPQIG+PL+IIVLEDTKE+ISYAPKEEI AQ+RR FD
Sbjct: 106 ERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFD 165

Query: 176 LLVIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRYGQPVKVDASGWQA 235
           L+V+VNPVLK++SNK ALFFEGCLSVDG+RA VER L+V V G DR G+ ++V+ASGWQA
Sbjct: 166 LMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQA 225

Query: 236 RILQHECDHLEGTLYVDRMAPKTFRTVENLDLPLAVGCPKLG 277
           RILQHECDHL+G LYVD+M P+TFRTV+NLDLPLA GCPKLG
Sbjct: 226 RILQHECDHLDGNLYVDKMVPRTFRTVDNLDLPLAEGCPKLG 267
[Close]
BLAST of Spo09019.1 vs. TAIR (Arabidopsis)
Match: AT5G14660.1 (peptide deformylase 1B)

HSP 1 Score: 100.9 bits (250), Expect = 1.300e-21
Identity = 72/220 (32.73%), Postives = 112/220 (50.91%), Query Frame = 1 

		  

Query: 49  LKTTRFFLSTKTLNPSSPPSTSITRAGWLLGLGNNKR------QKQLP-DLVKAGDPVLH 108
           LK+T  F ST  +N +SP ++S+      +   ++K       Q + P  +V+  DP+L 
Sbjct: 35  LKSTVTFCST--VNRTSPLTSSVRAEVKRVSRKDDKVASATDVQFETPLKIVEYPDPILR 94

Query: 109 EAAREVDPKDIGSEKIQKIIDDMIGVMRMAPGVGLAAPQIGIPLKIIVLEDTKEFISYAP 168
              + +D   I  E ++ ++D M  VM    G+GL+APQ+G+ ++++V     E     P
Sbjct: 95  AKNKRID---IFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGE-----P 154

Query: 169 KEEIKAQDRRPFDLLVIVNPVLKKKSNKTALFFEGCLSVDGYRAVVERSLDVEVKGLDRY 228
            E  +         +V+VNP +KK S+K   F EGCLS  G  A V R   V++   D  
Sbjct: 155 GEGKE---------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDIT 214

Query: 229 GQPVKVDASGWQARILQHECDHLEGTLYVDRMAPKTFRTV 262
           G+   +  S   ARI QHE DHLEG L+ DRM  +   ++
Sbjct: 215 GERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSI 235
The following BLAST results are available for this feature:
BLAST of Spo09019.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902185841|gb|KNA10561.1|1.6e-154100.hypothetical protein SOVF_1432... [more]
gi|731359232|ref|XP_010691172.1|4.2e-11578.7PREDICTED: peptide deformylase... [more]
gi|703094699|ref|XP_010095337.1|3.5e-10171.1Peptide deformylase 1A [Morus ... [more]
gi|645277304|ref|XP_008243708.1|5.5e-9968.0PREDICTED: peptide deformylase... [more]
gi|778689503|ref|XP_004152208.2|2.8e-9870.1PREDICTED: peptide deformylase... [more]
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BLAST of Spo09019.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QVL9_SPIOL1.1e-154100.Peptide deformylase OS=Spinaci... [more]
A0A0J8BKX1_BETVU2.9e-11578.7Peptide deformylase OS=Beta vu... [more]
W9SLQ8_9ROSA2.4e-10171.1Peptide deformylase OS=Morus n... [more]
A0A0A0KWR7_CUCSA1.9e-9870.1Peptide deformylase OS=Cucumis... [more]
B9RV35_RICCO2.5e-9868.8Peptide deformylase OS=Ricinus... [more]
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BLAST of Spo09019.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DEF1A_SOLLC7.8e-9364.1Peptide deformylase 1A, chloro... [more]
DEF1A_ARATH2.5e-9173.4Peptide deformylase 1A, chloro... [more]
DEF1A_ORYSJ8.6e-8464.5Peptide deformylase 1A, chloro... [more]
DEF1_GLOVI1.1e-4148.0Peptide deformylase 1 OS=Gloeo... [more]
DEFM_HUMAN1.1e-3035.4Peptide deformylase, mitochond... [more]
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BLAST of Spo09019.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G15390.11.4e-9273.4peptide deformylase 1A[more]
AT5G14660.11.3e-2132.7peptide deformylase 1B[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023635Peptide deformylasePRINTSPR01576PDEFORMYLASEcoord: 195..206
score: 8.0E-35coord: 226..255
score: 8.0E-35coord: 122..151
score: 8.0E-35coord: 207..225
score: 8.0
IPR023635Peptide deformylaseGENE3D3.90.45.10coord: 91..262
score: 9.6
IPR023635Peptide deformylaseHAMAPMF_00163Pep_deformylasecoord: 88..264
score: 27
IPR023635Peptide deformylasePANTHERPTHR10458PEPTIDE DEFORMYLASEcoord: 3..275
score: 3.2E
IPR023635Peptide deformylasePFAMPF01327Pep_deformylasecoord: 91..257
score: 6.8
IPR023635Peptide deformylaseTIGRFAMsTIGR00079TIGR00079coord: 92..257
score: 1.5
IPR023635Peptide deformylaseunknownSSF56420Peptide deformylasecoord: 89..261
score: 9.94
NoneNo IPR availablePANTHERPTHR10458:SF11PEPTIDE DEFORMYLASE, MITOCHONDRIALcoord: 3..275
score: 3.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043686 co-translational protein modification
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0034051 negative regulation of plant-type hypersensitive response
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0006007 glucose catabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0006412 translation
biological_process GO:0009658 chloroplast organization
cellular_component GO:0009507 chloroplast
cellular_component GO:0009295 nucleoid
cellular_component GO:0009579 thylakoid
cellular_component GO:0009536 plastid
cellular_component GO:0005829 cytosol
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0008836 diaminopimelate decarboxylase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function GO:0042586 peptide deformylase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005515 protein binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0047134 protein-disulfide reductase activity
RNA-Seq Expression