Spo09070 (gene) | SpinachBase

Overview


Name	Spo09070
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	(Plasma membrane H+-ATPase) (3.6.3.6)
Location	chr4 : 85221541 .. 85223161 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTCCCATATAATTATTTGTACCAAATACAGGAAACATTATTTTTTCTTTCCTTTCTTTTCTTTTCTTTTCCTTCCAATTCCTCCCAACCAAATAAAGCCTAAAATCCTCGGGTTTCTTCGCCCTTCTTCCTCTTCTACAAGCCTTCTATGGTTTCTTCGCCCACTCTCCCCATCTCTCCTATGGCACTGCTTCTTCTTTTTCTGGTTTCTTAACCTTGCCCCTCTCCTCTTCTCTTCCATGTCATTACCTTCATCTACTGTTCTTAATCGTCGTTCCAATGTCTTTCAATAATACCTTTGATGCTTCTAGAAACTGGCTCCTGCAATTATGGTAAGTCTGCTATTCAATTTTTTTTTTTTTACTATGTTTTAATTTGTGGTATTGGATGATGTTAATTCAGGGTTTGTTTGTTTTCTCCGTCTCGAATTTTGGGTTTTCTTAGTTTCATAATCGCAGTCCACATTCGCTCGGATTGATTATCGACTCTTTTATTTTGTGTTTATACTATGCTTTCAGTCGCAGATCTTGATGATCTTTCTTTGTGTTCATATGAATTTCTGGGTTTTTGTGTTCTTGGTTCAATAATTTGAATTTTTAGGTTTTTTGGTTCTTGGTTCAACGACTTCGTTTAAAAAAATTAAGTTATTTCCTGATTTTTTTAAATTTGCATACATTTCCAGGACCCTAAACAAATTGACAGTGGCCAAGAAATTATGGACAAATTTGGTAATATTACAAATTTTCATGCCAAATATCACCTAAATGTAGAACTTCCCCGTACTATATTAGCTTAATGTTAGGGTTAGTAGCTTGTCACTTTGGCAACTAGCTTAGCCCTATGATGTGGACGTAGAAGAAATGTTTAATTAGTAATTAATGTGAAGTAATCCTTTATTAAATAATTGTGGTTGCTTATAGAGATCTCACTTTGATAATTATTGTCTCTTGTTATATTTACAGAAAAATTATACTCCGTAATATATTTTTACGTCTATTTCGGTGGTAATTAGTTGAATCGAGGGTTATAGAAATTGTGTTTGATGGCCCTTTTTTGAGTTGGTTGTTTGGTCAAAGCAGAAATCTAGGAAAATTTCCAAAATTATTATAATGGCATACTCTCAATCAAAACACTAAATTATACTCCCATTTTGCTGTTTTTGCTTTACTAAATGTGATTAATCCTGTCAATCTTGTTAATCATATGCGTGTGTTATTTTATTGGGGTTGTAACAATTTCTATGTAAAGGTCTTACGTAACGGGGTGTGGAATGAAGAAGATGCAGCAGTGTTGGTTCATGGTGACATTATTAGTATCAAATTAGGGGACATAGTTCTAGCAGATGCTCGTCTAATGGACGAGGATCCTCTGAAGATCGATCAGGTAGGCTTATTAACAATATATCCCCCTGCCATGATGAAGTTTCAGTTAACTTAACTTTCTCATCTGTTTCTTTTGCACTAATTGTCTCTAAACATGCTGCTTGCATCCTTTTTTTGCATATGATGTCAATATGAGAGAAGTTAATTAACTTCTGCAGTTGTTTAATTCAGAGAAATTCTTGCAGAGTATTCAGGCGATGTACTTGGAGTATTATCTACGATTCTATATGGGCGTAG

mRNA sequence

CACTTCCCATATAATTATTTGTACCAAATACAGGAAACATTATTTTTTCTTTCCTTTCTTTTCTTTTCTTTTCCTTCCAATTCCTCCCAACCAAATAAAGCCTAAAATCCTCGGGTTTCTTCGCCCTTCTTCCTCTTCTACAAGCCTTCTATGGTTTCTTCGCCCACTCTCCCCATCTCTCCTATGGCACTGCTTCTTCTTTTTCTGGTTTCTTAACCTTGCCCCTCTCCTCTTCTCTTCCATGTCATTACCTTCATCTACTGTTCTTAATCGTCGTTCCAATGTCTTTCAATAATACCTTTGATGCTTCTAGAAACTGGCTCCTGCAATTATGGTCTTACGTAACGGGGTGTGGAATGAAGAAGATGCAGCAGTGTTGGTTCATGGTGACATTATTAGTATCAAATTAGGGGACATAGTTCTAGCAGATGCTCGTCTAATGGACGAGGATCCTCTGAAGATCGATCAGAGAAATTCTTGCAGAGTATTCAGGCGATGTACTTGGAGTATTATCTACGATTCTATATGGGCGTAG

Coding sequence (CDS)

ATGGTCTTACGTAACGGGGTGTGGAATGAAGAAGATGCAGCAGTGTTGGTTCATGGTGACATTATTAGTATCAAATTAGGGGACATAGTTCTAGCAGATGCTCGTCTAATGGACGAGGATCCTCTGAAGATCGATCAGAGAAATTCTTGCAGAGTATTCAGGCGATGTACTTGGAGTATTATCTACGATTCTATATGGGCGTAG

Protein sequence

MVLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSIIYDSIWA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo09070.1	Spo09070.1	mRNA

Homology

[Close]

BLAST of Spo09070.1 vs. NCBI nr
Match: gi|902165136|gb|KNA07063.1| (hypothetical protein SOVF_175380 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 139.4 bits (350), Expect = 2.300e-30
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1

		  
Query: 2  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSII 61
          VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSII
Sbjct: 1  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSII 60

Query: 62 YDSIW 67
          YDSIW
Sbjct: 61 YDSIW 65

[Close]

BLAST of Spo09070.1 vs. NCBI nr
Match: gi|902165135|gb|KNA07062.1| (hypothetical protein SOVF_175380 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 92.8 bits (229), Expect = 2.400e-16
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1

		  
Query: 2  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
          VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ
Sbjct: 1  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 45

[Close]

BLAST of Spo09070.1 vs. NCBI nr
Match: gi|902232531|gb|KNA22669.1| (hypothetical protein SOVF_032250 [Spinacia oleracea])

HSP 1 Score: 81.3 bits (199), Expect = 7.300e-13
Identity = 41/45 (91.11%), Postives = 41/45 (91.11%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLRNG WNEEDAAVLV GDIISIKLGDIV ADARLMD DPLKIDQ
Sbjct: 138 VLRNGKWNEEDAAVLVPGDIISIKLGDIVPADARLMDGDPLKIDQ 182

[Close]

BLAST of Spo09070.1 vs. NCBI nr
Match: gi|976905608|gb|KVH93238.1| (Cation-transporting P-type ATPase [Cynara cardunculus var. scolymus])

HSP 1 Score: 79.0 bits (193), Expect = 3.600e-12
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1

		  
Query: 2  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSII 61
          VLRNG WNEEDAAVLV GDIISIKLG+I+ ADARL++ DPLKIDQ  S   F    W I+
Sbjct: 24 VLRNGKWNEEDAAVLVPGDIISIKLGNIIPADARLLEGDPLKIDQLPSFNYF---NWLIM 83

Query: 62 YDSI 66
            ++
Sbjct: 84 ESAL 84

[Close]

BLAST of Spo09070.1 vs. NCBI nr
Match: gi|970046291|ref|XP_015084648.1| (PREDICTED: plasma membrane ATPase 1-like [Solanum pennellii])

HSP 1 Score: 77.8 bits (190), Expect = 8.000e-12
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLRNG WNEEDAAVLV GDIISIKLGDI+ ADARL++ DPLKIDQ
Sbjct: 140 VLRNGKWNEEDAAVLVPGDIISIKLGDIIPADARLLNGDPLKIDQ 184

[Close]

BLAST of Spo09070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK25_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_175380 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.600e-30
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1

		  
Query: 2  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSII 61
          VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSII
Sbjct: 1  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSII 60

Query: 62 YDSIW 67
          YDSIW
Sbjct: 61 YDSIW 65

[Close]

BLAST of Spo09070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QII7_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_175380 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.700e-16
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1

		  
Query: 2  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
          VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ
Sbjct: 1  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 45

[Close]

BLAST of Spo09070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUS9_SPIOL (Plasma membrane ATPase OS=Spinacia oleracea GN=SOVF_032250 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.100e-13
Identity = 41/45 (91.11%), Postives = 41/45 (91.11%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLRNG WNEEDAAVLV GDIISIKLGDIV ADARLMD DPLKIDQ
Sbjct: 138 VLRNGKWNEEDAAVLVPGDIISIKLGDIVPADARLMDGDPLKIDQ 182

[Close]

BLAST of Spo09070.1 vs. UniProtKB/TrEMBL
Match: A0A103XM46_CYNCS (Cation-transporting P-type ATPase OS=Cynara cardunculus var. scolymus GN=Ccrd_004713 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.500e-12
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1

		  
Query: 2  VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQRNSCRVFRRCTWSII 61
          VLRNG WNEEDAAVLV GDIISIKLG+I+ ADARL++ DPLKIDQ  S   F    W I+
Sbjct: 24 VLRNGKWNEEDAAVLVPGDIISIKLGNIIPADARLLEGDPLKIDQLPSFNYF---NWLIM 83

Query: 62 YDSI 66
            ++
Sbjct: 84 ESAL 84

[Close]

BLAST of Spo09070.1 vs. UniProtKB/TrEMBL
Match: Q75N99_DAUCA (Plasma membrane ATPase OS=Daucus carota GN=DcPA 3 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.200e-11
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G WNEEDAAVLV GDIISIKLGDIV ADARL++ DPLKIDQ
Sbjct: 138 VLRDGKWNEEDAAVLVPGDIISIKLGDIVPADARLLEGDPLKIDQ 182

[Close]

BLAST of Spo09070.1 vs. ExPASy Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 7.300e-13
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W EEDAAVLV GDIISIKLGDI+ ADARL++ DPLKIDQ
Sbjct: 138 VLRDGKWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182

[Close]

BLAST of Spo09070.1 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.500e-13
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W EEDAAVLV GDIISIKLGDI+ ADARL++ DPLKIDQ
Sbjct: 139 VLRDGRWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 183

[Close]

BLAST of Spo09070.1 vs. ExPASy Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.200e-12
Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W+EEDA+VLV GDIISIKLGDI+ ADARL++ DPLKIDQ
Sbjct: 138 VLRDGKWDEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182

[Close]

BLAST of Spo09070.1 vs. ExPASy Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.100e-12
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W E+DAA+LV GDIISIKLGDIV ADARL++ DPLKIDQ
Sbjct: 138 VLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 182

[Close]

BLAST of Spo09070.1 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 2.100e-12
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W E+DAA+LV GDIISIKLGDIV ADARL++ DPLKIDQ
Sbjct: 142 VLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 186

[Close]

BLAST of Spo09070.1 vs. TAIR (Arabidopsis)
Match: AT3G47950.1 (H(+)-ATPase 4)

HSP 1 Score: 72.4 bits (176), Expect = 1.200e-13
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W E+DAA+LV GDIISIKLGDIV ADARL++ DPLKIDQ
Sbjct: 142 VLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 186

[Close]

BLAST of Spo09070.1 vs. TAIR (Arabidopsis)
Match: AT5G62670.1 (H(+)-ATPase 11)

HSP 1 Score: 72.4 bits (176), Expect = 1.200e-13
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W E+DAA+LV GDIISIKLGDIV ADARL++ DPLKIDQ
Sbjct: 138 VLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 182

[Close]

BLAST of Spo09070.1 vs. TAIR (Arabidopsis)
Match: AT1G80660.1 (H(+)-ATPase 9)

HSP 1 Score: 71.6 bits (174), Expect = 2.000e-13
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W+E++AA+LV GDIISIKLGDIV AD RL+D DPLKIDQ
Sbjct: 139 VLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQ 183

[Close]

BLAST of Spo09070.1 vs. TAIR (Arabidopsis)
Match: AT1G17260.1 (autoinhibited H(+)-ATPase isoform 10)

HSP 1 Score: 71.2 bits (173), Expect = 2.700e-13
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W E+DA++LV GDIISIKLGDI+ ADARL++ DPLKIDQ
Sbjct: 142 VLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 186

[Close]

BLAST of Spo09070.1 vs. TAIR (Arabidopsis)
Match: AT2G18960.1 (H(+)-ATPase 1)

HSP 1 Score: 70.5 bits (171), Expect = 4.500e-13
Identity = 31/45 (68.89%), Postives = 41/45 (91.11%), Query Frame = 1

		  
Query: 2   VLRNGVWNEEDAAVLVHGDIISIKLGDIVLADARLMDEDPLKIDQ 47
           VLR+G W+E++AA+LV GDI+SIKLGDI+ ADARL++ DPLK+DQ
Sbjct: 134 VLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQ 178

The following BLAST results are available for this feature:

BLAST of Spo09070.1 vs. NCBI nr
BLAST of Spo09070.1 vs. UniProtKB/TrEMBL
BLAST of Spo09070.1 vs. ExPASy Swiss-Prot
BLAST of Spo09070.1 vs. TAIR (Arabidopsis)

BLAST of Spo09070.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902165136\|gb\|KNA07063.1\|	2.3e-30	100.	hypothetical protein SOVF_1753...	[more]
gi\|902165135\|gb\|KNA07062.1\|	2.4e-16	100.	hypothetical protein SOVF_1753...	[more]
gi\|902232531\|gb\|KNA22669.1\|	7.3e-13	91.1	hypothetical protein SOVF_0322...	[more]
gi\|976905608\|gb\|KVH93238.1\|	3.6e-12	64.0	Cation-transporting P-type ATP...	[more]
gi\|970046291\|ref\|XP_015084648.1\|	8.0e-12	84.4	PREDICTED: plasma membrane ATP...	[more]

BLAST of Spo09070.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QK25_SPIOL	1.6e-30	100.	Uncharacterized protein (Fragm...	[more]
A0A0K9QII7_SPIOL	1.7e-16	100.	Uncharacterized protein (Fragm...	[more]
A0A0K9RUS9_SPIOL	5.1e-13	91.1	Plasma membrane ATPase OS=Spin...	[more]
A0A103XM46_CYNCS	2.5e-12	64.0	Cation-transporting P-type ATP...	[more]
Q75N99_DAUCA	1.2e-11	84.4	Plasma membrane ATPase OS=Dauc...	[more]

BLAST of Spo09070.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
PMA3_NICPL	7.3e-13	80.0	Plasma membrane ATPase 3 OS=Ni...	[more]
PMA1_NICPL	9.5e-13	80.0	Plasma membrane ATPase 1 OS=Ni...	[more]
PMA1_SOLLC	1.2e-12	77.7	Plasma membrane ATPase 1 OS=So...	[more]
PMA11_ARATH	2.1e-12	77.7	ATPase 11, plasma membrane-typ...	[more]
PMA4_ARATH	2.1e-12	77.7	ATPase 4, plasma membrane-type...	[more]

BLAST of Spo09070.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G47950.1	1.2e-13	77.7	H(+)-ATPase 4	[more]
AT5G62670.1	1.2e-13	77.7	H(+)-ATPase 11	[more]
AT1G80660.1	2.0e-13	75.5	H(+)-ATPase 9	[more]
AT1G17260.1	2.7e-13	73.3	autoinhibited H(+)-ATPase isof...	[more]
AT2G18960.1	4.5e-13	68.8	H(+)-ATPase 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008250	P-type ATPase, A domain	GENE3D	2.70.150.10		coord: 2..46 score: 8.
IPR008250	P-type ATPase, A domain	PFAM	PF00122	E1-E2_ATPase	coord: 2..46 score: 5.
None	No IPR available	PANTHER	PTHR24093	FAMILY NOT NAMED	coord: 2..46 score: 4.7
None	No IPR available	unknown	SSF81653	Calcium ATPase, transduction domain A	coord: 2..46 score: 9.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006754	ATP biosynthetic process
biological_process	GO:0016049	cell growth
biological_process	GO:0006950	response to stress
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0007033	vacuole organization
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0007030	Golgi organization
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0006816	calcium ion transport
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0009630	gravitropism
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008553	proton-exporting ATPase activity, phosphorylative mechanism
molecular_function	GO:0005198	structural molecule activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo18782	0.74	Barchart \| Table
Spo14087	0.71	Barchart \| Table
Spo09866	0.70	Barchart \| Table
Spo11918	0.70	Barchart \| Table
Spo21067	0.69	Barchart \| Table
Spo08850	0.69	Barchart \| Table
Spo10815	0.69	Barchart \| Table
Spo16911	0.68	Barchart \| Table
Spo24287	0.68	Barchart \| Table
Spo09290	0.68	Barchart \| Table
Spo10427	0.67	Barchart \| Table
Spo20544	0.67	Barchart \| Table
Spo06689	0.67	Barchart \| Table
Spo19245	0.67	Barchart \| Table
Spo05093	0.67	Barchart \| Table
Spo01840	0.67	Barchart \| Table
Spo17498	0.67	Barchart \| Table
Spo01261	0.66	Barchart \| Table
Spo05928	0.66	Barchart \| Table
Spo10923	0.66	Barchart \| Table
Spo15639	0.66	Barchart \| Table
Spo25107	0.65	Barchart \| Table