Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATACGAAGTATTAGACTATTATCATACATTTTCTATAATTTTGATAAATTTTATCGACAACATAAAATTAACATTGGACCAAACACGAACACCAACAGGATCCAACACGACATAGTTGTTACCTCTACCGCTCTACTCCTTGTAAGTTGTATCCCATATTTGTTTGTTTTTTTTTCCATCTAAAACACAACTTTATCCTAACTTACAAATATCCATAAATCCCACTCCAGACGAATTGCGTGGCACTGATTCATTTTAATTTTATGGTCATCCTTATCGTAAAATTAATTTTACATTAAAAGATTCTTTAAAGTTTTGACACAATAATTCATTTCTAAGGTGCTTAAATACTCCCATTTTCTCAATCGTTTATAGCAAAAACATATTTGAAGTAATTAAAAAAAAAAATGACATCATCCATTTCATCTTCTTCCTCATCAATTGAACACACACTTTTACGACCTCAGAAGTTTGGTGATCAGCTCATCAATGGCGTATCATCTGTATCTGTGAAGAAGAGTTGTTTGGTCTCCATACGGTGTCGTTTTAATCTCCCCTATAGAAATTCTGGTTATAGGTAGATGTTTTTCATTGGTGTTAACCAAGCTAGCATTTTACTTTTTTTTAATCAATTGATTCTTAGTTTTTTGCTGTACAATACTACTACCTCTGTTTCGTTACATACGATCTGTTTGTTGCAATTCTATAAGAATTCCAATTGTTTTAGGAAAATTTTGTAATATTAATCCAACCTTTGGCCGGTTTTCTTTTATTAATCCCATCTACGACATATTTTTTAATAATCCCACCTTTACTACCCAACGACTTTTATTGGGCTTAAGTGACCGATAACCGGTGAAAAAATCATCGAGATGGTGATGATTTGATGATGATGACTGAATATATCGAGGGAGAGTACTTCCACGTAGGGACATATTATCGCCTACAATAGGTTTATGACGTTTTAGGCCCAATAAAAGTCGTTGGGTGGTATAGGTGGGATTATTAAAAAATATGTCGTAGGTGGGCTTTATAAAAGAAAATCGGCCAAAGGTTGGATTAATATTACCAAATTTTCCATTGTTTTATGGGTATATCTAATTTGGTTAAGAATTTAATAATGAATATTAATATTAATGTAAGGTTAACTGATAGTAGTAGGTCAAGAAGGGCTGGGGTGAGTAGCAATGCAGAGGTAGTGAGTACAGGAACACCAATATCTGTACCGGTTCGTGTAGCTCATGAACTTGTTCTAGCGGGCCACAACTACTTGGATGTCCGGTAATTATTTTTTCTCTTTGAAAAAATTATAACATGGAAGTAGCTTATCAGTTATCACATTGCATACAGAGTAATTCGGTTTGATGTGTATTAAATTTTGATTATTTGTGTTTTTGCAGGACTCCGGAAGAGTTCACTGCTGGGCGTGCACCCGGGGCTGTAAACATCCCTTACATGTTACGACTTGGTTCAGGTTTGGTTCGCTTAACTTACTACTCCCTCCTCCCTCCGTCCCTTAATATTCGACATTTTTGACTTTTTGTACTAAGGGATACACTTGTCTTTTTCGGCCTGTTATTTTTAATAACTTATCAACCCCACCCTCTAATTAAATAATCTATCTACACCCCACCCCCACCCCTTACCCCCTTAAAATAACATGATCCCCACTTATTTTAATTATTAAAATATCTATCCAACCGCAATTGTTTTATTACTTTATTTCATTCAATTTTTCTTCTTAATACACATACCCGACCAAATGTATCTCTTAAATAAATACGGAGGGAGTACTTAATAATAATATTAAGTATTTCTATTTCAGTATTAAGTAATAGTCCGTATTATATATTAACTGTTATTATTATCACATATGCTTGCTGACTAATTGCAGGGATGACAAAGAACCCCAATTTCCTACAACAAGTGTCATCACTATTTGACAAAGAGGATGAAATCCTTGTTGTAAGTTTCATCCATAAACCTCGCCTTTTTTTTTATTATTGATAAATGATAACATTCTTTTTTGTTTAGGGCTGCCAAAGTGGAAAGAGATCACTTATGGCTGCTAATGACCTTCAATCCGCGGTAACTATTAAAAATCGTTTTAGATATACATGAATTATCTTTCTGAATCATCTTTATTAATCAAGTTGTTCAATTTACAGGGTTACACGGGCATTGTCGACATCGCTGGTGGTTATTCTGCTTGGACCCAAAGTGAACTCACAACCGAAGTTTAATACCAATCATTATGATTATTAACTAATTAATACCACTAAATGTAGTGCACATCGCATGTAAACTACTGTATTAAGTTGTACATTTTCAAACATCTTTCTGTAAGCCTTGAGCTAACAACATAATTCTAATGTCCATACCAATATAGCCTTCAGCTCTACTTTTTTCGCGCTTGACATTTATTTCACATCAATGTCTTCTCTCATTTTGGCTAACCAATTAAGAAATAAGTTTGGCTGATACACTTTGAAATTGGTGTAAAACTAGACTACTTTTGTATGGTGTCTTAAAATTACGATTTGTAGTTGTGTCTCTGCGTAAGCTCTTTTGTATTACACAAGTGTTAGGGGCCGTTTGGTTCACACAGGGTAAAGGAAATGAAATTAAAAAAGGGTATGGAATAGAATGGAAAGCAAATCCCTTAGATTTTAAGAGTTGTTTGTTTAAACATATCCAAACAAACCCCTAAAAATCCCACCACCAATGTCTCCGCGACTCCCTGGCTCTCCCTGACCCGCGACTCCTTGTCTCTCCCCACCCGCGACTCACTCTCGCCCGGAAAGATCTAAAGCCCTACCCGCCGGCAACCCAATTTCACCAGCAACTGCCGGCAACTCGATTTCCACCGCCCGGGAGTTTGCTAGAATATAGAATAAAGATATACACACAAGAACTTGATGTTGAGTAATTTTTTTATATTCAAATAACACTCCGATCTCGC CATACGAAGTATTAGACTATTATCATACATTTTCTATAATTTTGATAAATTTTATCGACAACATAAAATTAACATTGGACCAAACACGAACACCAACAGGATCCAACACGACATAGTTGTTACCTCTACCGCTCTACTCCTTGTAAGTTGTATCCCATATTTGTTTGTTTTTTTTTCCATCTAAAACACAACTTTATCCTAACTTACAAATATCCATAAATCCCACTCCAGACGAATTGCGTGGCACTGATTCATTTTAATTTTATGGTCATCCTTATCGTAAAATTAATTTTACATTAAAAGATTCTTTAAAGTTTTGACACAATAATTCATTTCTAAGGTGCTTAAATACTCCCATTTTCTCAATCGTTTATAGCAAAAACATATTTGAAGTAATTAAAAAAAAAAATGACATCATCCATTTCATCTTCTTCCTCATCAATTGAACACACACTTTTACGACCTCAGAAGTTTGGTGATCAGCTCATCAATGGCGTATCATCTGTATCTGTGAAGAAGAGTTGTTTGGTCTCCATACGGTGTCGTTTTAATCTCCCCTATAGAAATTCTGGTTATAGTAGGTCAAGAAGGGCTGGGGTGAGTAGCAATGCAGAGGTAGTGAGTACAGGAACACCAATATCTGTACCGGTTCGTGTAGCTCATGAACTTGTTCTAGCGGGCCACAACTACTTGGATGTCCGGACTCCGGAAGAGTTCACTGCTGGGCGTGCACCCGGGGCTGTAAACATCCCTTACATGTTACGACTTGGTTCAGGGATGACAAAGAACCCCAATTTCCTACAACAAGTGTCATCACTATTTGACAAAGAGGATGAAATCCTTGTTGGCTGCCAAAGTGGAAAGAGATCACTTATGGCTGCTAATGACCTTCAATCCGCGGGTTACACGGGCATTGTCGACATCGCTGGTGGTTATTCTGCTTGGACCCAAAGTGAACTCACAACCGAAGTTTAATACCAATCATTATGATTATTAACTAATTAATACCACTAAATGTAGTGCACATCGCATGTAAACTACTGTATTAAGTTGTACATTTTCAAACATCTTTCTGTAAGCCTTGAGCTAACAACATAATTCTAATGTCCATACCAATATAGCCTTCAGCTCTACTTTTTTCGCGCTTGACATTTATTTCACATCAATGTCTTCTCTCATTTTGGCTAACCAATTAAGAAATAAGTTTGGCTGATACACTTTGAAATTGGTGTAAAACTAGACTACTTTTGTATGGTGTCTTAAAATTACGATTTGTAGTTGTGTCTCTGCGTAAGCTCTTTTGTATTACACAAGTGTTAGGGGCCGTTTGGTTCACACAGGGTAAAGGAAATGAAATTAAAAAAGGGTATGGAATAGAATGGAAAGCAAATCCCTTAGATTTTAAGAGTTGTTTGTTTAAACATATCCAAACAAACCCCTAAAAATCCCACCACCAATGTCTCCGCGACTCCCTGGCTCTCCCTGACCCGCGACTCCTTGTCTCTCCCCACCCGCGACTCACTCTCGCCCGGAAAGATCTAAAGCCCTACCCGCCGGCAACCCAATTTCACCAGCAACTGCCGGCAACTCGATTTCCACCGCCCGGGAGTTTGCTAGAATATAGAATAAAGATATACACACAAGAACTTGATGTTGAGTAATTTTTTTATATTCAAATAACACTCCGATCTCGC ATGACATCATCCATTTCATCTTCTTCCTCATCAATTGAACACACACTTTTACGACCTCAGAAGTTTGGTGATCAGCTCATCAATGGCGTATCATCTGTATCTGTGAAGAAGAGTTGTTTGGTCTCCATACGGTGTCGTTTTAATCTCCCCTATAGAAATTCTGGTTATAGTAGGTCAAGAAGGGCTGGGGTGAGTAGCAATGCAGAGGTAGTGAGTACAGGAACACCAATATCTGTACCGGTTCGTGTAGCTCATGAACTTGTTCTAGCGGGCCACAACTACTTGGATGTCCGGACTCCGGAAGAGTTCACTGCTGGGCGTGCACCCGGGGCTGTAAACATCCCTTACATGTTACGACTTGGTTCAGGGATGACAAAGAACCCCAATTTCCTACAACAAGTGTCATCACTATTTGACAAAGAGGATGAAATCCTTGTTGGCTGCCAAAGTGGAAAGAGATCACTTATGGCTGCTAATGACCTTCAATCCGCGGGTTACACGGGCATTGTCGACATCGCTGGTGGTTATTCTGCTTGGACCCAAAGTGAACTCACAACCGAAGTTTAA MTSSISSSSSSIEHTLLRPQKFGDQLINGVSSVSVKKSCLVSIRCRFNLPYRNSGYSRSRRAGVSSNAEVVSTGTPISVPVRVAHELVLAGHNYLDVRTPEEFTAGRAPGAVNIPYMLRLGSGMTKNPNFLQQVSSLFDKEDEILVGCQSGKRSLMAANDLQSAGYTGIVDIAGGYSAWTQSELTTEV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo09152.1 vs. NCBI nr
Match: gi|902222465|gb|KNA19180.1| (hypothetical protein SOVF_063960 isoform A [Spinacia oleracea]) HSP 1 Score: 369.4 bits (947), Expect = 3.800e-99 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Spo09152.1 vs. NCBI nr
Match: gi|902222466|gb|KNA19181.1| (hypothetical protein SOVF_063960 isoform B [Spinacia oleracea]) HSP 1 Score: 364.8 bits (935), Expect = 9.200e-98 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 1
BLAST of Spo09152.1 vs. NCBI nr
Match: gi|731343715|ref|XP_010683028.1| (PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 267.7 bits (683), Expect = 1.500e-68 Identity = 141/193 (73.06%), Postives = 158/193 (81.87%), Query Frame = 1
BLAST of Spo09152.1 vs. NCBI nr
Match: gi|502161637|ref|XP_004512233.1| (PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic-like isoform X1 [Cicer arietinum]) HSP 1 Score: 191.0 bits (484), Expect = 1.800e-45 Identity = 94/128 (73.44%), Postives = 106/128 (82.81%), Query Frame = 1
BLAST of Spo09152.1 vs. NCBI nr
Match: gi|502161640|ref|XP_004512234.1| (PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic-like isoform X2 [Cicer arietinum]) HSP 1 Score: 190.3 bits (482), Expect = 3.100e-45 Identity = 93/125 (74.40%), Postives = 105/125 (84.00%), Query Frame = 1
BLAST of Spo09152.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RI76_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_063960 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 2.600e-99 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Spo09152.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RI51_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_063960 PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 6.400e-98 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 1
BLAST of Spo09152.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0B1_BETVU (Sulfurtransferase OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g152590 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.100e-68 Identity = 141/193 (73.06%), Postives = 158/193 (81.87%), Query Frame = 1
BLAST of Spo09152.1 vs. UniProtKB/TrEMBL
Match: A0A0B2SC69_GLYSO (Senescence-associated protein DIN1 OS=Glycine soja GN=glysoja_003592 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.500e-43 Identity = 88/129 (68.22%), Postives = 106/129 (82.17%), Query Frame = 1
BLAST of Spo09152.1 vs. UniProtKB/TrEMBL
Match: B7FGV4_MEDTR (Rhodanese-related sulfurtransferase OS=Medicago truncatula GN=MTR_5g023170 PE=2 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.000e-42 Identity = 87/125 (69.60%), Postives = 103/125 (82.40%), Query Frame = 1
BLAST of Spo09152.1 vs. ExPASy Swiss-Prot
Match: STR15_ARATH (Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.400e-37 Identity = 79/138 (57.25%), Postives = 100/138 (72.46%), Query Frame = 1
BLAST of Spo09152.1 vs. ExPASy Swiss-Prot
Match: DIN1_RAPSA (Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 7.000e-37 Identity = 78/148 (52.70%), Postives = 104/148 (70.27%), Query Frame = 1
BLAST of Spo09152.1 vs. ExPASy Swiss-Prot
Match: STR16_ARATH (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2) HSP 1 Score: 150.2 bits (378), Expect = 2.200e-35 Identity = 71/112 (63.39%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Spo09152.1 vs. ExPASy Swiss-Prot
Match: STR18_ARATH (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.400e-23 Identity = 61/123 (49.59%), Postives = 75/123 (60.98%), Query Frame = 1
BLAST of Spo09152.1 vs. ExPASy Swiss-Prot
Match: STR19_ARATH (Rhodanese-like domain-containing protein 19, mitochondrial OS=Arabidopsis thaliana GN=STR19 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.500e-18 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 1
BLAST of Spo09152.1 vs. TAIR (Arabidopsis)
Match: AT4G35770.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 157.5 bits (397), Expect = 7.900e-39 Identity = 79/138 (57.25%), Postives = 100/138 (72.46%), Query Frame = 1
BLAST of Spo09152.1 vs. TAIR (Arabidopsis)
Match: AT5G66040.1 (sulfurtransferase protein 16) HSP 1 Score: 150.2 bits (378), Expect = 1.300e-36 Identity = 71/112 (63.39%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Spo09152.1 vs. TAIR (Arabidopsis)
Match: AT5G66170.2 (sulfurtransferase 18) HSP 1 Score: 104.4 bits (259), Expect = 7.900e-23 Identity = 61/125 (48.80%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of Spo09152.1 vs. TAIR (Arabidopsis)
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 94.4 bits (233), Expect = 8.200e-20 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 1
BLAST of Spo09152.1 vs. TAIR (Arabidopsis)
Match: AT2G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 90.5 bits (223), Expect = 1.200e-18 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09152.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09152.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09152.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo09152.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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