Spo09176 (gene) | SpinachBase

Overview


Name	Spo09176
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Transducin/WD40 repeat-like superfamily protein
Location	SpoScf_01706 : 23749 .. 32836 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAGACGAAAACTGTTTTAAGAGCTACTAACTAGTGAGCATAATTAGTGAAAGAAATTTCTGAATTCTTTTTGCATTTGTCATTCAACCAAATATCACTTTATTACTAAAATCATAATTTTCAAACGTCTATAAATTATAATATTGATGCCTTAATTAGGGAACAAGGGCGATAAGTCGATAACGGACTACGGTTTGTAGACAGCTCGAATTAAACGGGTTACTAGTTGAAATAATTCGGACTATAAGCGTTTTGGGTTGAAGCAGTTCGGATTGAAGCTAATCCAGTCATTAACGGGTTTTAGATCCATTCGATTTAGGTTTGAAACGGATCGGATTACTGCGTAACGGTTTGTTATCGGGTTTCTTCCTAGCTCTCCCAAGCTTCAATTTCGTGATTCCCTCCTATAGTTTATTCCACTCGCTCTCTCTTATCAGTCTTTAGAACTCATACCTCGCACCTCCCATCAAAGTAAAAATCGTTCAATTCACAAGCAATTTCAGGTTCATTTTCTGTTTTTTCCCTTTCTACTATTTTTTTTAAATTTTTTTTTGGTTCTGGGGTTTTCATTTCTTCTTCTGGGTACTTCTTATTTGTTCCAAAATCTAACAATATGTAATGAACTGTATAATTTCTGTTCTGGGTATGAAAAAATAGTGGGAACTTATTCTAATGGCGGAGCAGAAAACTGAGGAAGCAACACACCCATTTAAGAATCTATGCAGCAGAGAATACCAGGGTCACAAAAAGAAGGTATTTGATTTTTAGCCCTTTTTTATTTTGATTTCTTTGATGCCTTTTCATTAGAGTTTAATCTTTGTTTTGTCCAATTTCCCACAAATATTTCAACCAATGTACTGTAAACAGGTGCATTCAGTGGCTTGGAATTGTACGGGGACGAAGCTCGCTTCAGGATCGGTTGATCAAACGGCTCGAGTTTGGCACATTGAACCTCATAGTCATGTAAGCTTTAATTCTATCTACTCTACAATCATCTTATTTGATATTTGTGGATTCTTGCTGGAATTGATTGGAACTGTTTTGTGTGGTTTATTAATTAGTTTTGAGATGTAATTGGTTGGAGATTAGAATGCATATGTTCCCCAAATGGGCAGATCAATCGCTGGTGTTTGTGTTTGTTGAATTGGATTTTCAAACTGATCTTCTTTTAGGTCTAAGTTGTGTAGATAGCAAAGGAATGCCTAGTTTCCCAGCTGAGGAGGGAAACGGTTCAATTAGAAATGAATGTTTGAATTTGACTAGTTGTAGTTTAATGTTGTTGCTCAAGCTGCTAGTGTCGAAAATTCGTTCGTTGAAACTCTCTTTCAGCTAATTGAGAGTAGAATAAGTATTAATAAACTGTGGCTTATGATACAATCTTATGCACTTTAGTTTGTGAGATGATAAGTGTACTTTCCTTTATCATTTCCTCAATGTTCTCGTAGTGTCAATGTCTACACAAAGCAAAGCAGCTATTAGATCTATGGGTTAGGGAGACCTGATGGAATATTGTGTGAATATTGTATTGTGTGTAGTTTATTCTAGTTTCAGAACATCCAAATTTATGGATACAATTGTCAAGTATTATCCTCCAATACTCTTCTTACCAGTGTTGTGTTTTAGTTACAGGTTTATAGCTTAAGCTAACCCAGTGATATTCTAAGACAGATTTGTTAGCTTCAGATTCTTTTACCTTGAAACGTGCTATAAGTTTATGGTTTCTAGAAAGAGGACATTAAGAAAATTGAGGTTTCTCATTTCCATTTGACAATAGGAGAGTATGGCTGTATGGAAGCTGTTGAGGAAGGCTGTAATAGGCTGGAAATTCAGAAATGTGAAAAGGAGGAAATAGAAGAGAATATAGGTTTGGTAGATGATTGCAATGTTGCGCAATTATATCATCAATAATGGTGTGTTTATAATCCAAGCTTTGAAGTTGCTGGACACTGACAAAAGATAAGAAAAAAAACAAGTGAAATAAAACTCACCAACTTTCATCATGGTTTCTTTCTTCATAAACTCCTTTATTTATAGACTAGCTAATATGGATACCCCTCTTCTTGTTGCTCAAGCTACCTCTAAATTAATTATAATGGCACATTCCTAATATGCCCTTCCGTTATACCCGCTGCATCACAAAGGCATTGTGATATCCTAAGGTTTCAGGCAGTCATACATCTGAGATTAAGGTCCTCAATTCCGAACTATTGGCAGCTGGGAAGAAGACTGGAGGGTGGTTCAACTACTGTATGATTTCCATCACGGATGTAGTTATGAACTTATGATATCCCCCCATCTTATTAATCCAGATACAAAGTACTTCAATCTTTACCTAGACAATCCAACCACCATCATGGATTGTGCCTGGAAAGATGTAGTTTTCCCATTAGTTAAGTACTCAACTAACACTTAGATTATGGCTTTGTTTGTCACTACTTGGCTTTGCCTTACCTAGCTTAAAGTTAAAAGGCCACTTGAAAGATCCCAGAAAAGCTGCTAGCTAAAAGTCTGGCATTACCAGTTCTTAACTTTTGTTCACGTGCTCTTGGCCAGCTTGTGTCATTGTGAGATTCATGGTTTTCCTATTAAATATTTTTGGGTTCCATTAGGGAGTAATCCTAAGATGGTTTTTTCCTGGAATTTGGTGATTGAGGTTGGATAGGTTTTGGGGGGGGGGGGGGGNTTTTTCTCTCTTTTTTTTTGTTATCCTCATTTTATTCCCCTTGTAAAAATAGGTTCAAGACTTTCAACTAATCACAAAAAAAAAATTAAATTTTGCCGCCCTTATGTGATCTAAATGGTCAAAACATGTATTGCAAATAGTCGAAATGTAAAAGCCAAATCTGGACGGAGGGATTACCTGTTTTGATATCACATGTCTATTGTAATGTGCTTGGATTTCTGTAGTCCTATTTAATAGATGACATAAAAACTTGGTTTTTTGAGTTTCTAACGAAATCTTCATTTACTGCATGTTCTTCAATGAGGTAAGGTTTATGGTCCACGAAACCATGTCGATAATCTTGATATAGAAAAATTAATTACCTAGCTTGTACAGTTTTATATTAATTACAAAAATATGTCAAGTGCTATCACATCTGAATTAAATCTCTTATTGTATTCTTAGGTTTGTGCTAATGAGTGTTTCTTGGTTTAATACCCATTATCCTTTGGAATATCTGCTGCAGGGCAAGGCAAAAGATACTGAATTTAAGGGGCACACTGATAGTGTGGACCAGCTCTGTTGGGATCCCAAACACGCAGATCTACTTGCAACAGCATCAGGGGATAAAACAGTTCGTTTGTGGGATGTTCGTAGTAAGTCAAGATGAATCTCGATGCTTACAGTGCGGAAAAAGTAATAAGTTATATATGGCATGAAGTCCCTCACTGTCTCATTTATAACTATTTTTCATCATGAAAATTTTCCTTCTCAGTTTCACGACTCTCACCCAATGCCACTCATGATGAATGTCTATCTGTCTTTGATTATCTCAATGATGTTAAATTGTTAATGACTTCTCTATGCAGACACTTTCAACAGAGTTGAAAGATCAGTGGCAGACAATTTTGTGCCTTTTGGTTAAAATGGCCTAAATCACCAGACAATTTTTATTAATTGAGAAAATATTACAATCCATGTGTTTTCAGTGTTAGATGATAGAGTACCTATCCAAGAATGGAAACGCCAATACTGCCAATTCAATTCCAATTTTTTTTCATATAACATTGTGTAGACAGTATATAGCAGCAAGTTGGTCTTATTTCCTAATAGAACCAAAACTCTCCTAATAATTGCAATAAAGTTCTATGACCTGTTGAGGCTGCTAGCCTAATCAAGTTACCCCTATGTATACCTAATAAATAGAAGAAGTGTCCAAGGTTCTCTCACAATCGCATCCCTGAACTATTCGGTGCAATTGATTTAAATTCCAATTACGTCCCTTTCTTATCATCTGGGCCTTTTGGGGGAAGACAGTAAGACTATGTACGTGCATTATGACCGTCCTAGACCTTGTCATGGCCAGAACCTTGTCACTTTCTGATGTTTGTTCTTGTATCCTATCATTGCATCTCCAGCAAAACAAAGCCAAAATGATCAAACTACAGGTGGATCAAAACTTGCCTTTCAATACTTCCTATCCTCCCCCTCTTATTACTGATATATTATTGATTTTTTGTTGAAATTACTTTTTTCTTTGACAAATTTGGGCTTTTCTTTTGCGCAGCCCGCTATTACTATCACTGTTATTATTACTTCCCTACTACCTAATTACATTTAAAGAATGCTTTACTACTTCCGCTACTCCTGAAATATTACATTCTATTCCTATATACTGTCCGAGAAAATTATTACAGCGAATTCCTAGAGGAAAACCTCGTTGCCACCCTTTATTTTTAGTGCAAGAGTGTGTTCATCCTGATTTCCTGAACACTGCCGGCTGTGGGATTCGCAGTTTCACACTAGGTGATAATGAATGTGATGGTCTTACTGTGAATCTGCATGGAAACAGATTGATATTCCCTTATTAGCACCATCTACCCTTCTTCATCCATTTAACTAATCAGGGGATGATTCTGCATTTATTGGCAGGCCAAAATCTAGACCCATATGGGCTGTTTGCTTCTTCTACTTTTTTTTTCTTTTATCTTTAATTCCCTGTTGAATAACCACCAAATCTTACATTCCTCTTGAAAATAATACTTGGAGATTGTATAGCTGAACTCGTTTAAAGTAAAGATAAAATATGAGAACAGTGAATCATTCAAGTTTGCTTGGAAGCAGATATTCTTATAATTCCATTAGTTGATTGGGATGAGACTCTTTATCATGTTTGCTTTTGTGCTGTATAGGTGGGAAGTGCACACAGCAAGCAGAACTTAGTGGTGAAAATATCAACATTACATATAAACCTGATGGGGCACACATTGCTGTTGGAAACAGGGTATAATTTGCAATTTTCATGCTCGTTCTTGCTAAGGTCTTACTAAGTTTTTAGCCTTTTCTCTTTGTGCTCACTTTTAAATTGAATTTCACTTAATTCATGATTGGCACTTTTGGCAGCATATCTGCTTGGTGGCAGCAACATTTTGTGCTTGTTGTTGGATGATGCCTTTTCACACCTGACTTAGGTTCTGAGATGTTTAGCTCATTTTAACTCTATAAATGTTTCCTTCTTGTAGGATGATGAACTAACAATTCTGGATGTTAGAAAATTTAAGCCGATTCACAGGCGCAAGTTCAATTATGAGGTGAGTTCCGTTCTTCTTACTGCCAGTTCGTCTCTGTGCTCTTTATTTTCTAATGAATGTTTTGAATCATTGCTCGGTGATTCATGGGGATATGTGATTGGCTCATGGTTAAGTACTCGAAACACTTAGATATGGCTCTGTTTGGCATAGCTAGCTGAAAGTAAAAAGGCAAGTTGAAAGCTAAATAGTTAGTTTATTGCAGAGAAGCTGCTAGCTAAAAGCCTAAAAGGTTGAAAAGGTCACAGGGTTTAAGGAAGTTCACCCATTGCCTCCTTTTTCTATGATGTTACTCGGACTCTTCATTCACCTCAAGTACCCATGTCGGATCCTCGACACCCAGACATGGGTATACCCAGTGACTCAGTCGGTTAGAATACGGGTTGGTGTTTTTCACCACTGGTGTTTTTCAGGATGGACCCGCTATGAACCTGACCCCCCACCCCCCCCAAAACAATAGAAATTTTTTAGCGTGCAACTATGCATGGCGTTGTTTTCGTAATGTCCATGCATATATTTGTTTGAATTAACATGAAAGGTTCACCCTTTTTGGGGTATTATTTGCGAAAGAACTTCAATACTCAGTTGATTTTCACAATCCTCCCACAGAGAGAAATGATGGAAACTATCCTCTCGACTCTCAAGTTTTAAATAGTGGAGAGTAAAAGTCAATTAGGCAAGTGTAAAAATCAGCTCCAACATAGTTGTTCAATCACATAGTTGATCACAATGTTAACTTTTATCCAGGTAAATGAGATTGCATGGGACATGACTGGAGAGAAGTTCTTTCTGACAACTGGAAATGGTGAGATTAGTTTGTTTTATGTGGAATGTTTTTAAGTTTGCTGGTGTAGAATGGAAATGTCAATATCATTCATGTTTTTGCACATATAGGTACTGTCGAAGTCCTTGCATACCCCTCGTTGAAGGCACTTGACACCCTTACCGCTCACACTGCTGGTTGTTATTGCATTGCAATTGATCCACTAGGAAGGTATCCTGAATTCCGTCTGAGTTTATTCATCCAGCATATTTATGTCTTTCACTTTCCATTGCTAGAAGATACGCAGAAACAGAAATTGATTTCTTGCTAAATCACTCAGCTCAAATGTGCGTGCTTTCCCTTTGCTTTCATTTTCTGTCCCTGACATTAGATCTGCAATATGGCTTTGGTCATTATTTTTGTGTGGACTGTGATAATAAATTAATAACGGTTTTGGCAACACTACTCGGTATTTCCTCATGATTATGTGCCTATGTGGTGCTATTGCTATCCTTGAACTAGTGGTCATCATCTCCATTTTGCTCCTAATATTGATGCATGTAGAGGTTTTATGTAACTCTTCTTGGTCTTCTGGTCAGCGATTACAAAAAATCATATCATTCATGTTTAATTGCAGCTTAAAAATTCTGCCCGTTAGGTCGGGTCGGATCAAACTTCGGCCCATTTTTGGGCCGGGGCAAATTTATGACTAAAATTTCAATTTTGAGTTGCCCAAAACCCGCCCCTAAAATATAAAATCGCACCGGGACCGAAAAACGGGCCTAAAGATTCTGCCCAAACTCGCTATTTTTCGGGCCGGACATGGCTTATGATGATCAGGTCTAGATGTCACAGACAAAAATTTAAATACTTCGTACAAGCATTACATTTTTCTTAAATAAAAATTATAAGCTAACTAACAGGCATCACCAGTTTCACCATCATTCTCATAATTGAAATTTAACATGCACATACTCAATAACACCTAAAATCTATAGGTCTTTTCATGTTCGGACAATAATGGAATGAATAAAAATTACTCAATATACCTGCATGTGCTTCTTATTCCTCCTGATTATGTGGCTATGTGGTGCTATTGCTATCCTGGAAGTAGTGTTATATTGGTAGCCATAGTGGTCATCATCTCCATTTTGCTCCTAATTGATTCACTATTGATGCATATGTACCTCTTCTTTGTCTACTGGTCAGCAACTACAAAGAAGCACATCATTCATGTTTAATTGCAGCCTTTTCCACGTAGTAAATCAGAACAACTCTTGTTAATACATGTGGGGTTGATGGCAGATATTTTGCTGTTGGAAGCGCCGACTCGTTGGTCAGTCTTTGGGACATTAAAGAGATGCTATGTGTACGAACGTTTGTGAAACTCGAGTAAGATTGACTTGGATTTATCTTGATGTTTATATTTTTGGTGTTTCTCCGTTAGTCCTGTAACCTTTTTGATAACATCAGATGGCCTGTCCGAACAATAAGTTTCAATCACACTGGAGAGTATATTGCTTCAGCCAGTGAAGATTTATTTATTGATATAGTAAGTCCCCTAACTGAATATTCTTTTGCTCTTTTGCTTACATTTGAAACAAAACCTTACAAACCTACTCTGCAGTTCGGTATATAAGGGTGCGTTTTCTTCACCTGATTTTCACTTATTTTTTTTCTGAACTTACCTGAACTTATATGAATTTATCTGAACTTATCAAAACTTATTTTAGTTATAAATTGTATTTGGTCAACTCTTTATTTTTCCAAAATAAGTGGAAATAAGGTAAACAGAACAGAACCTAACTCCTTGTCGTCAAACTAGCATTAAAAACCCCGTGATAACATTCACTGGATAATATGAATAGAGTTGCTTATGAAGAGCAGTCCTGTCCTGATTATAGGAAATCTTTGGTCTGATTGATCTGACATGAGTAACATTTTTCAGTCAAGTATTGAAACTGGACGATCCACCCACCAAATACCTTGTCGGGCAGCAATGAATAGTGTTGAATGGAATCCCAAGTCCAACTTGCTTGCATATGCTGGAGATGACAAAAACAAATACCAAACAGATGAAGGTGATAAGATTTCTGTCACTTGCACTTGAATTTGGTCATTTATTTATAGAATAATTGGTGCACTTTCCATAATCGGTCGTACTTTATTAATTGGTGCACTTTCCATTTATGGAAATTTCCCCTTATTTTATAATTTTCTTCTTATCCCAGGACCCCACTAGTAATATTTTATCATTTATTCCTTGTCTTTTCTTTCGTTTAAATACTTTAGTACCTCCACTATCTTTTATTACAATTGTTTATCTCCGTTTACCCCACTTATATTTTATTTTAATAAAATCAACTCACATTCATTAAACTCTGAGTCAAAGTGCACCAATTAAATTCTATACGGAGGGAGTATTTATGTAGCTTAATTTCTTTTGTTAGGACAATCTTTGAACACCCTTTTTTTAATTGAATTGTTGCAGGTGTTTTCCGCATATTTGGTTTCCAGAGTGCTTAGTGTTTTGCAGATACGAGACACTGTTAGTTCATCAATCAAGTAATGTATTGACTACCAAAGTTGTCTAGGATTATATGAAAAGATAAAACAGGAGCTGTCGACGTGGTGGTCTGAGATCTTGCGGTAGAGGTGGCAAATGGATACTCGGTCAGAGTAAGGTCGTATACAGTTATAATTCTGTTTTTCAGGTCTGGTTCATTGTGGAATGTATCAACTATGAGTAGTTTATTTTATGATCAATCAATTTTAGTTGTTCTATTAGTTCCTGTATTGAATAATACTTAGTACTATATACAACATAGGAAAATTTGGTAATATTAATCCAACCTTTGGCCGATTTTCTTTTATTAAGTCCACCTACGACATATTTTTTAATAATCCCACCTTTACTACCCAACGACTTTTATTGGGCCTAACAGGTAATAAACTTGTTGTAGACGGTAATATGTCTCTACGTGGAAGTACCCTCTCTCGATATATTCAGTCATTATCATCAATTCATCACCATCTCGTTTACTTTTTCACCGATTTTCGATCACTTAAG

mRNA sequence

ATGAAACTCATACCTCGCACCTCCCATCAAAGTAAAAATCGTTCAATTCACAAGCAATTTCAGTGGGAACTTATTCTAATGGCGGAGCAGAAAACTGAGGAAGCAACACACCCATTTAAGAATCTATGCAGCAGAGAATACCAGGGTCACAAAAAGAAGGTGCATTCAGTGGCTTGGAATTGTACGGGGACGAAGCTCGCTTCAGGATCGGTTGATCAAACGGCTCGAGTTTGGCACATTGAACCTCATAGTCATGGCAAGGCAAAAGATACTGAATTTAAGGGGCACACTGATAGTGTGGACCAGCTCTGTTGGGATCCCAAACACGCAGATCTACTTGCAACAGCATCAGGGGATAAAACAGTTCGTTTGTGGGATGTTCGTAGTGGGAAGTGCACACAGCAAGCAGAACTTAGTGGTGAAAATATCAACATTACATATAAACCTGATGGGGCACACATTGCTGTTGGAAACAGGGATGATGAACTAACAATTCTGGATGTTAGAAAATTTAAGCCGATTCACAGGCGCAAGTTCAATTATGAGGTAAATGAGATTGCATGGGACATGACTGGAGAGAAGTTCTTTCTGACAACTGGAAATGGTACTGTCGAAGTCCTTGCATACCCCTCGTTGAAGGCACTTGACACCCTTACCGCTCACACTGCTGGTTGTTATTGCATTGCAATTGATCCACTAGGAAGATATTTTGCTGTTGGAAGCGCCGACTCGTTGGTCAGTCTTTGGGACATTAAAGAGATGCTATGTGTACGAACGTTTGTGAAACTCGAATGGCCTGTCCGAACAATAAGTTTCAATCACACTGGAGAGTATATTGCTTCAGCCAGTGAAGATTTATTTATTGATATATCAAGTATTGAAACTGGACGATCCACCCACCAAATACCTTGTCGGGCAGCAATGAATAGTGTTGAATGGAATCCCAAGTCCAACTTGCTTGCATATGCTGGAGATGACAAAAACAAATACCAAACAGATGAAGGTGTTTTCCGCATATTTGGTTTCCAGAGTGCTTAGTGTTTTGCAGATACGAGACACTGTTAGTTCATCAATCAAGTAATGTATTGACTACCAAAGTTGTCTAGGATTATATGAAAAGATAAAACAGGAGCTGTCGACGTGGTGGTCTGAGATCTTGCGGTAGAGGTGGCAAATGGATACTCGGTCAGAGTAAGGTCGTATACAGTTATAATTCTGTTTTTCAGGTCTGGTTCATTGTGGAATGTATCAACTATGAGTAGTTTATTTTATGATCAATCAATTTTAGTTGTTCTATTAGTTCCTGTATTGAATAATACTTAGTACTATATACAACATAGGAAAATTTGGTAATATTAATCCAACCTTTGGCCGATTTTCTTTTATTAAGTCCACCTACGACATATTTTTTAATAATCCCACCTTTACTACCCAACGACTTTTATTGGGCCTAACAGGTAATAAACTTGTTGTAGACGGTAATATGTCTCTACGTGGAAGTACCCTCTCTCGATATATTCAGTCATTATCATCAATTCATCACCATCTCGTTTACTTTTTCACCGATTTTCGATCACTTAAG

Coding sequence (CDS)

ATGAAACTCATACCTCGCACCTCCCATCAAAGTAAAAATCGTTCAATTCACAAGCAATTTCAGTGGGAACTTATTCTAATGGCGGAGCAGAAAACTGAGGAAGCAACACACCCATTTAAGAATCTATGCAGCAGAGAATACCAGGGTCACAAAAAGAAGGTGCATTCAGTGGCTTGGAATTGTACGGGGACGAAGCTCGCTTCAGGATCGGTTGATCAAACGGCTCGAGTTTGGCACATTGAACCTCATAGTCATGGCAAGGCAAAAGATACTGAATTTAAGGGGCACACTGATAGTGTGGACCAGCTCTGTTGGGATCCCAAACACGCAGATCTACTTGCAACAGCATCAGGGGATAAAACAGTTCGTTTGTGGGATGTTCGTAGTGGGAAGTGCACACAGCAAGCAGAACTTAGTGGTGAAAATATCAACATTACATATAAACCTGATGGGGCACACATTGCTGTTGGAAACAGGGATGATGAACTAACAATTCTGGATGTTAGAAAATTTAAGCCGATTCACAGGCGCAAGTTCAATTATGAGGTAAATGAGATTGCATGGGACATGACTGGAGAGAAGTTCTTTCTGACAACTGGAAATGGTACTGTCGAAGTCCTTGCATACCCCTCGTTGAAGGCACTTGACACCCTTACCGCTCACACTGCTGGTTGTTATTGCATTGCAATTGATCCACTAGGAAGATATTTTGCTGTTGGAAGCGCCGACTCGTTGGTCAGTCTTTGGGACATTAAAGAGATGCTATGTGTACGAACGTTTGTGAAACTCGAATGGCCTGTCCGAACAATAAGTTTCAATCACACTGGAGAGTATATTGCTTCAGCCAGTGAAGATTTATTTATTGATATATCAAGTATTGAAACTGGACGATCCACCCACCAAATACCTTGTCGGGCAGCAATGAATAGTGTTGAATGGAATCCCAAGTCCAACTTGCTTGCATATGCTGGAGATGACAAAAACAAATACCAAACAGATGAAGGTGTTTTCCGCATATTTGGTTTCCAGAGTGCTTAG

Protein sequence

MKLIPRTSHQSKNRSIHKQFQWELILMAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTDEGVFRIFGFQSA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo09176.1	Spo09176.1	mRNA

Homology

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|902225892|gb|KNA20224.1| (hypothetical protein SOVF_054440 [Spinacia oleracea])

HSP 1 Score: 668.7 bits (1724), Expect = 5.500e-189
Identity = 318/319 (99.69%), Postives = 319/319 (100.00%), Query Frame = 1


		  
Query: 27  MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 86
           MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG
Sbjct: 1   MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 60

Query: 87  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 146
           KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT
Sbjct: 61  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 120

Query: 147 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 206
           YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV
Sbjct: 121 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 180

Query: 207 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 266
           LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
Sbjct: 181 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 240

Query: 267 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 326
           VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD
Sbjct: 241 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 300

Query: 327 KNKYQTDEGVFRIFGFQSA 346
           KNKYQTDEGVFRIFGFQ+A
Sbjct: 301 KNKYQTDEGVFRIFGFQNA 319

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|731345475|ref|XP_010683937.1| (PREDICTED: THO complex subunit 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 638.6 bits (1646), Expect = 6.100e-180
Identity = 302/319 (94.67%), Postives = 308/319 (96.55%), Query Frame = 1


		  
Query: 27  MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 86
           MA+QK EEAT PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH HG
Sbjct: 1   MADQKAEEATIPFKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG 60

Query: 87  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 146
           K KD EFKGHTDSVDQLCWDPKH D+LATASGDKTVRLWD RSGKC+QQAELSGENINIT
Sbjct: 61  KVKDIEFKGHTDSVDQLCWDPKHGDVLATASGDKTVRLWDARSGKCSQQAELSGENINIT 120

Query: 147 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 206
           YKPDG HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTG+KFFLTTGNGTVEV
Sbjct: 121 YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGDKFFLTTGNGTVEV 180

Query: 207 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 266
           LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
Sbjct: 181 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 240

Query: 267 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 326
           VRTISFNHTGEYIASASEDLFIDIS++ETGRS HQIPCRAAMNSVEWNPKSNLLAYAGDD
Sbjct: 241 VRTISFNHTGEYIASASEDLFIDISNVETGRSIHQIPCRAAMNSVEWNPKSNLLAYAGDD 300

Query: 327 KNKYQTDEGVFRIFGFQSA 346
           KNKYQ DEGVFRIFGFQSA
Sbjct: 301 KNKYQADEGVFRIFGFQSA 319

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|747099304|ref|XP_011097701.1| (PREDICTED: THO complex subunit 3 [Sesamum indicum])

HSP 1 Score: 603.2 bits (1554), Expect = 2.800e-169
Identity = 282/312 (90.38%), Postives = 295/312 (94.55%), Query Frame = 1


		  
Query: 34  EATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEF 93
           E T PFK L SREYQGHKKKVHSVAWNCTGTKLASGSVDQTAR+W IEPHSHGK KD E 
Sbjct: 2   EETIPFKTLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARIWQIEPHSHGKVKDIEL 61

Query: 94  KGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAH 153
           KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKC+QQAELSGENINITYKPDG H
Sbjct: 62  KGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTH 121

Query: 154 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLK 213
           IAVGNRDDELTILDVRKFKPIH+RKFNYEVNEIAW+MTG+ FFLTTGNGTVEVLAYPSL+
Sbjct: 122 IAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLAYPSLR 181

Query: 214 ALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFN 273
           A+DTL AHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIK+MLCVRTF KLEWPVRTISFN
Sbjct: 182 AVDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKDMLCVRTFTKLEWPVRTISFN 241

Query: 274 HTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTD 333
           HTGEYIASASEDLFIDI++++TGRS HQIPCRAAMNSVEWNPK NLLAYAGDDKNKYQ D
Sbjct: 242 HTGEYIASASEDLFIDIANVQTGRSVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQAD 301

Query: 334 EGVFRIFGFQSA 346
           EGVFRIFGF SA
Sbjct: 302 EGVFRIFGFDSA 313

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|1009107710|ref|XP_015881111.1| (PREDICTED: THO complex subunit 3 [Ziziphus jujuba])

HSP 1 Score: 603.2 bits (1554), Expect = 2.800e-169
Identity = 282/312 (90.38%), Postives = 294/312 (94.23%), Query Frame = 1


		  
Query: 34  EATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEF 93
           E T PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIE H HGK KD E 
Sbjct: 2   EETIPFKNLQSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIETHGHGKVKDIEL 61

Query: 94  KGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAH 153
           KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKCTQQAELSGENINITYKPDG H
Sbjct: 62  KGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGIH 121

Query: 154 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLK 213
           IAVGNRDDELTILDVRKFKPIH+RKFNYEVNEIAW+MTG+KFFLTTGNGTVEVLAYPSL+
Sbjct: 122 IAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGDKFFLTTGNGTVEVLAYPSLR 181

Query: 214 ALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFN 273
            LDTL AHTAGCYCIAIDP+GRYFAVGSADSLVSLWDI EMLCVRTF KLEWPVRTISFN
Sbjct: 182 PLDTLMAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFN 241

Query: 274 HTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTD 333
           HTG+YIASASEDLFIDI++++TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKNKYQ D
Sbjct: 242 HTGDYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQAD 301

Query: 334 EGVFRIFGFQSA 346
           EGVFRIFGF SA
Sbjct: 302 EGVFRIFGFDSA 313

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|694408961|ref|XP_009379130.1| (PREDICTED: THO complex subunit 3 [Pyrus x bretschneideri])

HSP 1 Score: 600.9 bits (1548), Expect = 1.400e-168
Identity = 284/315 (90.16%), Postives = 295/315 (93.65%), Query Frame = 1


		  
Query: 31  KTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKD 90
           +TEE T PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH HGKAKD
Sbjct: 3   ETEEPTIPFKNLSSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKAKD 62

Query: 91  TEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPD 150
            E KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKC Q AELSGENINITYKPD
Sbjct: 63  IELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCAQLAELSGENINITYKPD 122

Query: 151 GAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYP 210
           G HIAVGNRDDELTILDVRKFKPIH+RKFNYEVNEIAW  T E FFLTTGNGTVEVLAYP
Sbjct: 123 GTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWSTTSEIFFLTTGNGTVEVLAYP 182

Query: 211 SLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTI 270
           SLK +DTL AHTAGCYCIAIDPLGRYFAVGSADSLVSLWDI EMLCV+TF KLE PVRTI
Sbjct: 183 SLKPVDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDISEMLCVKTFPKLESPVRTI 242

Query: 271 SFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKY 330
           SFNHTGEY+ASASEDLFIDIS+++TGR+ HQIPCRAAMNSVEWNPKSNLLAYAGDDKNKY
Sbjct: 243 SFNHTGEYLASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKY 302

Query: 331 QTDEGVFRIFGFQSA 346
           QTDEGVFRIFGF+SA
Sbjct: 303 QTDEGVFRIFGFKSA 317

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMU0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054440 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 3.800e-189
Identity = 318/319 (99.69%), Postives = 319/319 (100.00%), Query Frame = 1


		  
Query: 27  MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 86
           MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG
Sbjct: 1   MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 60

Query: 87  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 146
           KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT
Sbjct: 61  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 120

Query: 147 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 206
           YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV
Sbjct: 121 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 180

Query: 207 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 266
           LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
Sbjct: 181 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 240

Query: 267 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 326
           VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD
Sbjct: 241 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 300

Query: 327 KNKYQTDEGVFRIFGFQSA 346
           KNKYQTDEGVFRIFGFQ+A
Sbjct: 301 KNKYQTDEGVFRIFGFQNA 319

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C266_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g160810 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 4.200e-180
Identity = 302/319 (94.67%), Postives = 308/319 (96.55%), Query Frame = 1


		  
Query: 27  MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 86
           MA+QK EEAT PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH HG
Sbjct: 1   MADQKAEEATIPFKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG 60

Query: 87  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 146
           K KD EFKGHTDSVDQLCWDPKH D+LATASGDKTVRLWD RSGKC+QQAELSGENINIT
Sbjct: 61  KVKDIEFKGHTDSVDQLCWDPKHGDVLATASGDKTVRLWDARSGKCSQQAELSGENINIT 120

Query: 147 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 206
           YKPDG HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTG+KFFLTTGNGTVEV
Sbjct: 121 YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGDKFFLTTGNGTVEV 180

Query: 207 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 266
           LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
Sbjct: 181 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 240

Query: 267 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 326
           VRTISFNHTGEYIASASEDLFIDIS++ETGRS HQIPCRAAMNSVEWNPKSNLLAYAGDD
Sbjct: 241 VRTISFNHTGEYIASASEDLFIDISNVETGRSIHQIPCRAAMNSVEWNPKSNLLAYAGDD 300

Query: 327 KNKYQTDEGVFRIFGFQSA 346
           KNKYQ DEGVFRIFGFQSA
Sbjct: 301 KNKYQADEGVFRIFGFQSA 319

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A0A059BRQ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01999 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 1.300e-168
Identity = 280/315 (88.89%), Postives = 297/315 (94.29%), Query Frame = 1


		  
Query: 31  KTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKD 90
           + EEA  PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH HGK KD
Sbjct: 62  RMEEAI-PFKNLPSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKD 121

Query: 91  TEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPD 150
            E KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKC+QQAELSGENINITYKPD
Sbjct: 122 IELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD 181

Query: 151 GAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYP 210
           G H+AVGNRDDELTILDVRKFKPIH+RKFNYEVNEIAW+M+GE FFLTTGNGTVEVLAYP
Sbjct: 182 GTHVAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMSGEMFFLTTGNGTVEVLAYP 241

Query: 211 SLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTI 270
           SL+ +DTL AHTAGCYCIAIDP+GRYFAVGSADSLVSLWDI EMLCVRTF KLEWPVRTI
Sbjct: 242 SLRPVDTLMAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 301

Query: 271 SFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKY 330
           SFNHTG+Y+ASASEDLFIDIS+++TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKNKY
Sbjct: 302 SFNHTGDYVASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKY 361

Query: 331 QTDEGVFRIFGFQSA 346
           Q DEGVFRIFGF+SA
Sbjct: 362 QADEGVFRIFGFESA 375

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A5ADM7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01220 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 4.900e-168
Identity = 281/312 (90.06%), Postives = 292/312 (93.59%), Query Frame = 1


		  
Query: 34  EATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEF 93
           E T PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTAR+W IE H HGK KD E 
Sbjct: 2   EETIPFKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARIWLIEQHGHGKVKDIEL 61

Query: 94  KGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAH 153
           KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKCTQQAELSGENINITYKPDG H
Sbjct: 62  KGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGTH 121

Query: 154 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLK 213
           IAVGNRDDELTILDVRKFKPIHRRKF+YEVNEIAW+MTGE FFLTTGNGTVEVLAYP+L+
Sbjct: 122 IAVGNRDDELTILDVRKFKPIHRRKFSYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPALR 181

Query: 214 ALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFN 273
            LDTL AHTAGCYCIAIDP+GRYFAVGSADSLVSLWDI EMLCVRTF KLEWPVRTISFN
Sbjct: 182 PLDTLMAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFN 241

Query: 274 HTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTD 333
           HTGEYIASASEDLFIDIS++ TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKNKYQ D
Sbjct: 242 HTGEYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQAD 301

Query: 334 EGVFRIFGFQSA 346
           EGVFRIFGF+SA
Sbjct: 302 EGVFRIFGFESA 313

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A0A067L389_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23824 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 3.200e-167
Identity = 279/312 (89.42%), Postives = 290/312 (92.95%), Query Frame = 1


		  
Query: 34  EATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEF 93
           E T PFKNL SREYQGHKKKVHSVAWNC+GTKLASGSVDQTARVWHIEPH HGK KD E 
Sbjct: 2   EETIPFKNLHSREYQGHKKKVHSVAWNCSGTKLASGSVDQTARVWHIEPHGHGKIKDVEL 61

Query: 94  KGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAH 153
           KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKC+QQ ELSGENINITY+PDG H
Sbjct: 62  KGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQTELSGENINITYRPDGTH 121

Query: 154 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLK 213
           IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAW+MTGE F LTTGNGTVEVLAYPSL+
Sbjct: 122 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFLLTTGNGTVEVLAYPSLR 181

Query: 214 ALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFN 273
            LDT+ AHTAGCYCIAIDP GRYFAVGSADSLVSLWDI EMLCVRTF KLEWPVRTISFN
Sbjct: 182 PLDTVVAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFN 241

Query: 274 HTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTD 333
           HTG+YIASASEDLFIDIS++ TGRS HQIPCRAAMNSVEWNPK NLLAYAGDDKNKY  D
Sbjct: 242 HTGDYIASASEDLFIDISNVHTGRSVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYLAD 301

Query: 334 EGVFRIFGFQSA 346
           EGVFRIFGF+SA
Sbjct: 302 EGVFRIFGFESA 313

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: THOC3_ARATH (THO complex subunit 3 OS=Arabidopsis thaliana GN=THO3 PE=1 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 6.800e-163
Identity = 269/314 (85.67%), Postives = 291/314 (92.68%), Query Frame = 1


		  
Query: 33  EEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTE 92
           EE T PFK+L SREYQGHKKKVHSVAWN  GTKLASGSVDQTAR+W+IEPH H KAKD E
Sbjct: 2   EETTIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE 61

Query: 93  FKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGA 152
            KGHTDSVDQLCWDPKH+DL+ATASGDK+VRLWD RSGKCTQQ ELSGENINITYKPDG 
Sbjct: 62  LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGT 121

Query: 153 HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSL 212
           H+AVGNRDDELTILDVRKFKP+HRRKFNYEVNEIAW+M G+ FFLTTG GTVEVL+YPSL
Sbjct: 122 HVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSL 181

Query: 213 KALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISF 272
           K LDTLTAHTAGCYCIAIDP GRYFAVGSADSLVSLWDI +MLC+RTF KLEWPVRTISF
Sbjct: 182 KPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISF 241

Query: 273 NHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQ 332
           N++GEYIASASEDLFIDI++++TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKN KY 
Sbjct: 242 NYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNPKYN 301

Query: 333 TDEGVFRIFGFQSA 346
           TDEGVFRIFGF+S+
Sbjct: 302 TDEGVFRIFGFESS 315

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: THOC3_MOUSE (THO complex subunit 3 OS=Mus musculus GN=Thoc3 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.300e-91
Identity = 153/301 (50.83%), Postives = 209/301 (69.44%), Query Frame = 1


		  
Query: 44  SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQL 103
           +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E       K+  ++GH DSVDQL
Sbjct: 48  TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 107

Query: 104 CWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAHIAVGNRDDEL 163
           CW P + DL  TASGDKT+R+WDVR+ KC       GENINI + PDG  IAVGN+DD +
Sbjct: 108 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 167

Query: 164 TILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTA 223
           T +D +  +     +F +EVNEI+W+     FFLT GNG + +L+YP LK + ++ AH +
Sbjct: 168 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPS 227

Query: 224 GCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEYIASAS 283
            C CI  DP+G+YFA GSAD+LVSLWD+ E++CVR F +L+WPVRT+SF+H G+ +ASAS
Sbjct: 228 NCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASAS 287

Query: 284 EDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQT--DEGVFRIF 342
           ED FIDI+ +ETG    ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Sbjct: 288 EDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLF 346

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: THOC3_BOVIN (THO complex subunit 3 OS=Bos taurus GN=THOC3 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.300e-91
Identity = 153/301 (50.83%), Postives = 209/301 (69.44%), Query Frame = 1


		  
Query: 44  SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQL 103
           +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E       K+  ++GH DSVDQL
Sbjct: 48  TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 107

Query: 104 CWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAHIAVGNRDDEL 163
           CW P + DL  TASGDKT+R+WDVR+ KC       GENINI + PDG  IAVGN+DD +
Sbjct: 108 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 167

Query: 164 TILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTA 223
           T +D +  +     +F +EVNEI+W+     FFLT GNG + +L+YP LK + ++ AH +
Sbjct: 168 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPS 227

Query: 224 GCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEYIASAS 283
            C CI  DP+G+YFA GSAD+LVSLWD+ E++CVR F +L+WPVRT+SF+H G+ +ASAS
Sbjct: 228 NCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASAS 287

Query: 284 EDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQT--DEGVFRIF 342
           ED FIDI+ +ETG    ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Sbjct: 288 EDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLF 346

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: THOC3_HUMAN (THO complex subunit 3 OS=Homo sapiens GN=THOC3 PE=1 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.900e-91
Identity = 153/301 (50.83%), Postives = 209/301 (69.44%), Query Frame = 1


		  
Query: 44  SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQL 103
           +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E       K+  ++GH DSVDQL
Sbjct: 48  TREFLAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 107

Query: 104 CWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAHIAVGNRDDEL 163
           CW P + DL  TASGDKT+R+WDVR+ KC       GENINI + PDG  IAVGN+DD +
Sbjct: 108 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 167

Query: 164 TILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTA 223
           T +D +  +     +F +EVNEI+W+     FFLT GNG + +L+YP LK + ++ AH +
Sbjct: 168 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPS 227

Query: 224 GCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEYIASAS 283
            C CI  DP+G+YFA GSAD+LVSLWD+ E++CVR F +L+WPVRT+SF+H G+ +ASAS
Sbjct: 228 NCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASAS 287

Query: 284 EDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQT--DEGVFRIF 342
           ED FIDI+ +ETG    ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Sbjct: 288 EDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLF 346

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: AAC3_DICDI (WD repeat-containing protein AAC3 OS=Dictyostelium discoideum GN=AAC3 PE=2 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 2.900e-65
Identity = 127/333 (38.14%), Postives = 194/333 (58.26%), Query Frame = 1


		  
Query: 35  ATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEP------------ 94
           A+  F    ++++ G+KKK  SVAWN  GTK+AS   D   RVW+ +P            
Sbjct: 149 ASRYFSECSTKDFIGNKKKSTSVAWNANGTKIASSGSDGIVRVWNFDPLGNSNNNNNSNN 208

Query: 95  ----HSHGKAKDT-EFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAE 154
                 +   K+T E KGH  S++++ W PK+ DLLA+A  DK +++WDV+ GKC     
Sbjct: 209 TSSNSKNNNIKETIELKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVS 268

Query: 155 LSGENINITYKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFN-YEVNEIAWDMTGEKFF 214
            + ENI++ + PDG  I    RDD L ++D+   K +   KFN  E+N++ WD  G+   
Sbjct: 269 TNSENIDVRWSPDGQFIVACTRDDHLALIDLPTIKTLKIYKFNGEELNQVGWDNNGDLIL 328

Query: 215 LTTGNGTVEVLAY-----PSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDI 274
           +    G +E   +       +K L TL  HTA  YC+  DP G+Y A GSADS+VSLWDI
Sbjct: 329 MANSMGNIEAYKFLPKSTTHVKHLKTLYGHTASIYCMEFDPTGKYLAAGSADSIVSLWDI 388

Query: 275 KEMLCVRTFVKLEWPVRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSV 334
           ++M+CV+TF+K  +P R++SF+  G++IA++S +  I+I  IE+ +  H I C + ++S+
Sbjct: 389 EDMMCVKTFIKSTFPCRSVSFSFDGQFIAASSFESTIEIFHIESSQPIHTIEC-SGVSSL 448

Query: 335 EWNPKSNLLAYAGDDKNKYQTDEGVFRIFGFQS 345
            W+P   LLAYA  + N+   D  + R+FG+ S
Sbjct: 449 MWHPTLPLLAYA-PEINENNKDPSI-RVFGYHS 478

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT5G56130.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 574.7 bits (1480), Expect = 3.800e-164
Identity = 269/314 (85.67%), Postives = 291/314 (92.68%), Query Frame = 1


		  
Query: 33  EEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTE 92
           EE T PFK+L SREYQGHKKKVHSVAWN  GTKLASGSVDQTAR+W+IEPH H KAKD E
Sbjct: 2   EETTIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE 61

Query: 93  FKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGA 152
            KGHTDSVDQLCWDPKH+DL+ATASGDK+VRLWD RSGKCTQQ ELSGENINITYKPDG 
Sbjct: 62  LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGT 121

Query: 153 HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSL 212
           H+AVGNRDDELTILDVRKFKP+HRRKFNYEVNEIAW+M G+ FFLTTG GTVEVL+YPSL
Sbjct: 122 HVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSL 181

Query: 213 KALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISF 272
           K LDTLTAHTAGCYCIAIDP GRYFAVGSADSLVSLWDI +MLC+RTF KLEWPVRTISF
Sbjct: 182 KPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISF 241

Query: 273 NHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQ 332
           N++GEYIASASEDLFIDI++++TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKN KY 
Sbjct: 242 NYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNPKYN 301

Query: 333 TDEGVFRIFGFQSA 346
           TDEGVFRIFGF+S+
Sbjct: 302 TDEGVFRIFGFESS 315

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT5G67320.1 (WD-40 repeat family protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.700e-24
Identity = 86/283 (30.39%), Postives = 131/283 (46.29%), Query Frame = 1


		  
Query: 52  KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQLCWDPKHAD 111
           K V ++ WN  GT LA+GS D  AR+W +    +G+   T  K H   +  L W+ K  D
Sbjct: 325 KDVTTLDWNGEGTLLATGSCDGQARIWTL----NGELISTLSK-HKGPIFSLKWNKK-GD 384

Query: 112 LLATASGDKTVRLWDVRSGKCTQQAEL-SGENINITYKPDGAHIAVGNRDDELTILDVRK 171
            L T S D+T  +WDV++ +  QQ E  SG  +++ ++ +    A  + D  + +  + +
Sbjct: 385 YLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCKIGE 444

Query: 172 FKPIHRRKFNY-EVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTAGCYCIA 231
            +P      +  EVN + WD TG      + + T ++        +  L  HT   Y I 
Sbjct: 445 TRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIR 504

Query: 232 IDPLGR---------YFAVGSADSLVSLWDIK--EMLCVRTFVKLEWPVRTISFNHTGEY 291
             P G            A  S DS V LWD +  +MLC  +F     PV +++F+  GEY
Sbjct: 505 WSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLC--SFNGHREPVYSLAFSPNGEY 564

Query: 292 IASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLA 322
           IAS S D  I I SI+ G+          +  V WN + N +A
Sbjct: 565 IASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIA 598

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT5G08560.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 92.0 bits (227), Expect = 7.500e-19
Identity = 86/348 (24.71%), Postives = 152/348 (43.68%), Query Frame = 1


		  
Query: 3   LIPRTSHQSKNRSI-HKQFQWELILMAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNC 62
           L+  + H  ++  + H     +L L ++ +  +  H   +  ++  + H  +V  + ++ 
Sbjct: 227 LVENSLHIQRDSCVFHNTLDSDLSLYSDHQCGK--HQIPSQTAQILESHTDEVWFLQFSH 286

Query: 63  TGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKT 122
            G  LAS S DQTA +W I    H   K T   GH   V  + W P    +L T   ++ 
Sbjct: 287 NGKYLASSSKDQTAIIWEISADGHISLKHT-LVGHHKPVIAILWSPDDRQVL-TCGAEEV 346

Query: 123 VRLWDVRSGKCTQQAELSG-ENINITYKPDGAHIAVGNRDDELTILDV-RKFKPIHRRKF 182
           +R WDV SG C    E  G   I+  + PDG  I  G  D  + + D+  + K   + + 
Sbjct: 347 IRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQR 406

Query: 183 NYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAV 242
             +V++IA  MT +  +L +      +  +     ++ L          ++    +Y  V
Sbjct: 407 TQKVSDIA--MTDDGKWLVSVCKDSVISLFDREATVERLIEEEDMITSFSLSNDNKYILV 466

Query: 243 GSADSLVSLWDI----KEMLCVRTFVKLEWPVRTISFNHTGEYIASASEDLFIDISSIET 302
              +  + LW+I    K +   +   +  + +R+    +   +IAS SED  + I    T
Sbjct: 467 NLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRST 526

Query: 303 GRSTHQIPCRA-AMNSVEWNPKS-NLLAYAGDDKNKYQTDEGVFRIFG 342
           G+   ++P  A A+N V W+P + ++LA A DD        G  RI+G
Sbjct: 527 GKLIVELPGHAGAVNCVSWSPTNLHMLASASDD--------GTIRIWG 560

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 1.200e-16
Identity = 58/214 (27.10%), Postives = 104/214 (48.60%), Query Frame = 1


		  
Query: 47  YQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIE-PHSHGKAKDTEFKGHTDSVDQLCW 106
           Y+GH   +  +AW+       S S D T R+W    P+   K      +GHT+ V  + +
Sbjct: 81  YEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKV----LRGHTNFVFCVNF 140

Query: 107 DPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENI-NITYKPDGAHIAVGNRDDELT 166
           +P  ++L+ + S D+T+R+W+V++GKC +  +     I ++ +  DG+ I   + D    
Sbjct: 141 NPP-SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCK 200

Query: 167 ILDVRK---FKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAH 226
           I D ++    K +   K +  V+   +   G+   + T + T+++  Y + K L   T H
Sbjct: 201 IWDAKEGTCLKTLIDDK-SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGH 260

Query: 227 TAGCYCIAID---PLGRYFAVGSADSLVSLWDIK 253
           T   +CI        G+Y   GS D+ V LWD++
Sbjct: 261 TNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQ 288

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.700e-15
Identity = 62/252 (24.60%), Postives = 114/252 (45.24%), Query Frame = 1


		  
Query: 45  REYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQLC 104
           +E+ GH+  +  VA++     + S S D+T ++W +E  S  K       GHT+    + 
Sbjct: 65  QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKT----LIGHTNYAFCVN 124

Query: 105 WDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENIN-ITYKPDGAHIAVGNRDDEL 164
           ++P+ ++++ + S D+TVR+WDV +GKC +      + +  + +  DG+ I   + D   
Sbjct: 125 FNPQ-SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 184

Query: 165 TILDVRKFKPIHR--RKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAH 224
            I D      +       N  V+ + +   G+   + T + T+ +    S K L T T H
Sbjct: 185 RIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 244

Query: 225 TAGCYCIAID---PLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEY 284
               YCI+       G+    GS D+ V +W++     ++        V  ++ + T   
Sbjct: 245 VNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENL 304

Query: 285 IASASEDLFIDI 291
           IAS S D  + I
Sbjct: 305 IASGSLDKTVRI 311

The following BLAST results are available for this feature:

BLAST of Spo09176.1 vs. NCBI nr
BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
BLAST of Spo09176.1 vs. TAIR (Arabidopsis)

BLAST of Spo09176.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902225892\|gb\|KNA20224.1\|	5.5e-189	99.6	hypothetical protein SOVF_0544...	[more]
gi\|731345475\|ref\|XP_010683937.1\|	6.1e-180	94.6	PREDICTED: THO complex subunit...	[more]
gi\|747099304\|ref\|XP_011097701.1\|	2.8e-169	90.3	PREDICTED: THO complex subunit...	[more]
gi\|1009107710\|ref\|XP_015881111.1\|	2.8e-169	90.3	PREDICTED: THO complex subunit...	[more]
gi\|694408961\|ref\|XP_009379130.1\|	1.4e-168	90.1	PREDICTED: THO complex subunit...	[more]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RMU0_SPIOL	3.8e-189	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8C266_BETVU	4.2e-180	94.6	Uncharacterized protein OS=Bet...	[more]
A0A059BRQ3_EUCGR	1.3e-168	88.8	Uncharacterized protein OS=Euc...	[more]
A5ADM7_VITVI	4.9e-168	90.0	Putative uncharacterized prote...	[more]
A0A067L389_JATCU	3.2e-167	89.4	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
THOC3_ARATH	6.8e-163	85.6	THO complex subunit 3 OS=Arabi...	[more]
THOC3_MOUSE	5.3e-91	50.8	THO complex subunit 3 OS=Mus m...	[more]
THOC3_BOVIN	5.3e-91	50.8	THO complex subunit 3 OS=Bos t...	[more]
THOC3_HUMAN	6.9e-91	50.8	THO complex subunit 3 OS=Homo ...	[more]
AAC3_DICDI	2.9e-65	38.1	WD repeat-containing protein A...	[more]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G56130.1	3.8e-164	85.6	Transducin/WD40 repeat-like su...	[more]
AT5G67320.1	2.7e-24	30.3	WD-40 repeat family protein	[more]
AT5G08560.1	7.5e-19	24.7	transducin family protein / WD...	[more]
AT4G02730.1	1.2e-16	27.1	Transducin/WD40 repeat-like su...	[more]
AT3G49660.1	1.7e-15	24.6	Transducin/WD40 repeat-like su...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 43..78 score: 1.2E-6coord: 92..126 score: 7.7E-5coord: 215..250 score: 8.
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 86..126 score: 2.4E-8coord: 40..79 score: 1.1E-8coord: 170..208 score: 120.0coord: 295..333 score: 46.0coord: 211..250 score: 6.6E-8coord: 253..292 score:
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 47..81 score: 13.483coord: 218..259 score: 12.647coord: 93..135 score: 16
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 29..327 score: 3.7
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 47..301 score: 29
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 38..327 score: 3.43
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 113..127 scor
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 66..80 score: 1.7E-7coord: 237..251 score: 1.7E-7coord: 113..127 score: 1.
None	No IPR available	PANTHER	PTHR22839	THO COMPLEX SUBUNIT 3 THO3	coord: 33..344 score: 7.5E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19902	0.71	Barchart \| Table
Spo26775	0.66	Barchart \| Table
Spo18635	0.65	Barchart \| Table