Spo09299 (gene)

Overview
NameSpo09299
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 53939704 .. 53940541 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTCTCCCGGTACTCTCCCCCCTTCCAACTTTTGAAAAATATCGAGTCAGTTGTAGAAGACATAGCATTTGACCATTGTACGGGAAAACAACACTTCATCAACAGAATAAAACAATGAATGGACCATTCATTAGACAGGTATAAGGCTGAAAAGGGTTTGTGTATACTCTCTAAACTACTTATGTATCTTAACAGTGTCAACAACGAGAAAGCTGCTGGTGCGATTCCTAAGAAAATGGGAAAGAATGAAGTTTTGACTCTTACAAGTATTCTTTCCTCCTATTGTTTGTTTGTTGGTTCGGTATTTTTTTTTGTTTGGTAAACGAAATACGTTAATGTGACTAGGTGACATGATATGATGGGAAAACTTGTATGGTGAAGGCTAGTTTTCTTTGTTCTGGTGAGTGTCACTGAAATAGACGATTCAGTAATTGAGTATTGGTTGGATGTTTACGTCTTGTTTTTGACCGAAATCAACAGTATGGCGAAGCTGTGACCATGTATCTGAATCGTTGTCGCTGCGAGTTTTGGGTTGTCAGTTTTGTTGGAAACCATTTGGAACTTTTCAAGACTGTTTTTGGCTGTAAGTTTCTACTTTGGGAGGATTTGTATTAAGCAAAAATGACAATAAACTAGTTGAACCTGAAGTTTGAAATGTTGTATATTGACAGTTATCATAAGTTAAACAAAAACATACTCCACTTAGATAATTGAAATTATGTAACGTGGTTGATTAGATTATTATTTAATAAACAAAGTTCTTCAATGATTAAGCTGAAAAAGCATGATTAGCACGTGAAATACTGCAGTTGCCAACTTTAACATGGCTGGAG

mRNA sequence

ATGCAAGTCTCCCGGTACTCTCCCCCCTTCCAACTTTTGAAAAATATCGAGTCAGTTGTAGAAGACATAGCATTTGACCATTACAGGTATAAGGCTGAAAAGGGTTTGTGTATACTCTCTAAACTACTTATGTATCTTAACAGTGTCAACAACGAGAAAGCTGCTGGTGCGATTCCTAAGAAAATGGGAAAGAATGAAGTTTTGACTCTTACAAGTATTCTTTCCTCCTATTGTTTGTTTGTTGGTTCGTATGGCGAAGCTGTGACCATGTATCTGAATCGTTGTCGCTGCGAGTTTTGGGTTGTCAGTTTTGTTGGAAACCATTTGGAACTTTTCAAGACTGTTTTTGGCTGTAAGTTTCTACTTTGGGAGGATTTGTATTAAGCAAAAATGACAATAAACTAGTTGAACCTGAAGTTTGAAATGTTGTATATTGACAGTTATCATAAGTTAAACAAAAACATACTCCACTTAGATAATTGAAATTATGTAACGTGGTTGATTAGATTATTATTTAATAAACAAAGTTCTTCAATGATTAAGCTGAAAAAGCATGATTAGCACGTGAAATACTGCAGTTGCCAACTTTAACATGGCTGGAG

Coding sequence (CDS)

ATGCAAGTCTCCCGGTACTCTCCCCCCTTCCAACTTTTGAAAAATATCGAGTCAGTTGTAGAAGACATAGCATTTGACCATTACAGGTATAAGGCTGAAAAGGGTTTGTGTATACTCTCTAAACTACTTATGTATCTTAACAGTGTCAACAACGAGAAAGCTGCTGGTGCGATTCCTAAGAAAATGGGAAAGAATGAAGTTTTGACTCTTACAAGTATTCTTTCCTCCTATTGTTTGTTTGTTGGTTCGTATGGCGAAGCTGTGACCATGTATCTGAATCGTTGTCGCTGCGAGTTTTGGGTTGTCAGTTTTGTTGGAAACCATTTGGAACTTTTCAAGACTGTTTTTGGCTGTAAGTTTCTACTTTGGGAGGATTTGTATTAA

Protein sequence

MQVSRYSPPFQLLKNIESVVEDIAFDHYRYKAEKGLCILSKLLMYLNSVNNEKAAGAIPKKMGKNEVLTLTSILSSYCLFVGSYGEAVTMYLNRCRCEFWVVSFVGNHLELFKTVFGCKFLLWEDLY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09299.1Spo09299.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo09299.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09299.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09299.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09299.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006121 mitochondrial electron transport, succinate to ubiquinone
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006412 translation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0030001 metal ion transport
biological_process GO:0000028 ribosomal small subunit assembly
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0045281 succinate dehydrogenase complex
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005840 ribosome
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression