Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAATTTCCAAGGTTTAGAATTGGAAAAAAGGCACACGCCGGAAAATGACATGGAGAGAGGACCTCCCACGACGGAAGCTGGCGGAACAGAGGTCGGTGTTAGGTCAGTTCTCCGGCGATGGAAGAGAGATGATTTTATCAGAAAAGGGTCATTGGCTTTGAGAGCTTTGGCTTTTGTGTTTTCATTACTCTCCTTTATTATCATGGCGAGTAACAATCATGGTGGCGGGAAAGAATTCGGGGATTATGAAGAATATAGGTAATACGGGTTTTTTTCGATTTTGACAATAGAATTAGTTTTTTTATTATTATCTTGTTGAATTGGGGTTTTAATTATTTAATTAATTTGGGATGTTTATCGGAAATGCAGGTATTTGTTGGCAATAGCAATATTATCGTCCATATATACAGGATTGCAATGTTTTAGACATGTTCATCAATTATCCAGTGGGAAACAATTTGTTGATCTCAAGACTTCAGCTTTGATTGATTTTGTTGGAGATCAGGTCGGTTTCTTTTCCCAATTTTCTAAATGTAACTTTTTCAGTTCTTGGATAGAGTGTAGAATGGATAATTCTGGAAGAATCTTTGTCCCTTTGTTTTCACTTTTCTTGATTGTCTTATGTTCCATGTACATTAACACTTTTATAGTATAAGACTATAAGGATGTACTTTTCGAATATACGCCTAGCTATAAGTACACCCGCGTGTTTTGCACTACATATATTCAAGTGAAGAGTTATGAATTGTATGATCTTGCAATGTAGTTGAAGAACTTTTGGAAATTTTGGAAGGTCTTTTGATTAAAAGTGCCCTTTTAATTTGGAATGTTGAGAAATGGGAATACTTTTTGTGTAGTATAATCTAATACTTCATGTTTTATTTTTGTACACTGTATGATGTTGGGTATAATTAAGCTATTGTACTACCTTGGAACTAAAGTTACAATGTGAAACCAATAATATAAAAGGCGCAAATTCGAATTATGTGTAATGCAAGCACCGATTCGTCAAGGGGAGACCAAGTCTCCTTTGTATCTTGAGTTTTGTAAACATGTATAACTAAAGAGTAAAGACCAATAGTTATGGGTTATAGTTCTTAATTTGGTGGACAAGAGTTGAAATTTTCTAAGCAAACTATGTTTATTTGTGTTAGTGTGACATGATATTATATGTTGTTTACTAGGTCAGTGTATTTTGTTTGAAATTTTGGATTTCAAGGCTTGACTTGCTGCTAGTCGTCGTTCATGCTTTTTTGATGGTCAACTTTGCTTAAATTAGTTAATTAAGCTTTTCAATGGAATCATTACTTACTAGTTAGTAATTTCAATGAAAAAAAGCCCATCTGGATACATTTTAGCAGGAAATTTCTTGATCTGTAGAACCTAAACTGAAATCTGAGACAAGTTTGTGTTTGCAGATAACGGCATACTTTTTACTGTCATCAGCATCTTCGGCGATTCCTATTACAAACAGAATGCGGGAGGGAGCAGACAACATTTTCACAGATTCATCCGCAGCAGCCATAAGCATGTCTCTTCTGGCTTTCATTTCATTGGCATGTTCAGCTGTTGTTTCATTTCATAAGCTCTCCACTCAATCATTTATATGAAAACTTGCTCTTATCAAATAGGATTACTAATAATGTATACATTCTTCAACTTTATTCTTTACACACTGTATAGTCTTTGCATATCATATACTTGATTACTGAGCTCGCCTTTCTTCATTGTAAATTAGTATACCTGATTTGAGATTAGAAATGCACACCTACAGTTGTTCACTTGTCTCTGCTGA ATGTCGAATTTCCAAGGTTTAGAATTGGAAAAAAGGCACACGCCGGAAAATGACATGGAGAGAGGACCTCCCACGACGGAAGCTGGCGGAACAGAGGTCGGTGTTAGGTCAGTTCTCCGGCGATGGAAGAGAGATGATTTTATCAGAAAAGGGTCATTGGCTTTGAGAGCTTTGGCTTTTGTGTTTTCATTACTCTCCTTTATTATCATGGCGAGTAACAATCATGGTGGCGGGAAAGAATTCGGGGATTATGAAGAATATAGGTATTTGTTGGCAATAGCAATATTATCGTCCATATATACAGGATTGCAATGTTTTAGACATGTTCATCAATTATCCAGTGGGAAACAATTTGTTGATCTCAAGACTTCAGCTTTGATTGATTTTGTTGGAGATCAGATAACGGCATACTTTTTACTGTCATCAGCATCTTCGGCGATTCCTATTACAAACAGAATGCGGGAGGGAGCAGACAACATTTTCACAGATTCATCCGCAGCAGCCATAAGCATGTCTCTTCTGGCTTTCATTTCATTGGCATGTTCAGCTGTTGTTTCATTTCATAAGCTCTCCACTCAATCATTTATATGAAAACTTGCTCTTATCAAATAGGATTACTAATAATGTATACATTCTTCAACTTTATTCTTTACACACTGTATAGTCTTTGCATATCATATACTTGATTACTGAGCTCGCCTTTCTTCATTGTAAATTAGTATACCTGATTTGAGATTAGAAATGCACACCTACAGTTGTTCACTTGTCTCTGCTGA ATGTCGAATTTCCAAGGTTTAGAATTGGAAAAAAGGCACACGCCGGAAAATGACATGGAGAGAGGACCTCCCACGACGGAAGCTGGCGGAACAGAGGTCGGTGTTAGGTCAGTTCTCCGGCGATGGAAGAGAGATGATTTTATCAGAAAAGGGTCATTGGCTTTGAGAGCTTTGGCTTTTGTGTTTTCATTACTCTCCTTTATTATCATGGCGAGTAACAATCATGGTGGCGGGAAAGAATTCGGGGATTATGAAGAATATAGGTATTTGTTGGCAATAGCAATATTATCGTCCATATATACAGGATTGCAATGTTTTAGACATGTTCATCAATTATCCAGTGGGAAACAATTTGTTGATCTCAAGACTTCAGCTTTGATTGATTTTGTTGGAGATCAGATAACGGCATACTTTTTACTGTCATCAGCATCTTCGGCGATTCCTATTACAAACAGAATGCGGGAGGGAGCAGACAACATTTTCACAGATTCATCCGCAGCAGCCATAAGCATGTCTCTTCTGGCTTTCATTTCATTGGCATGTTCAGCTGTTGTTTCATTTCATAAGCTCTCCACTCAATCATTTATATGA MSNFQGLELEKRHTPENDMERGPPTTEAGGTEVGVRSVLRRWKRDDFIRKGSLALRALAFVFSLLSFIIMASNNHGGGKEFGDYEEYRYLLAIAILSSIYTGLQCFRHVHQLSSGKQFVDLKTSALIDFVGDQITAYFLLSSASSAIPITNRMREGADNIFTDSSAAAISMSLLAFISLACSAVVSFHKLSTQSFI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo09344.1 vs. NCBI nr
Match: gi|902035501|gb|KNA02621.1| (hypothetical protein SOVF_216990, partial [Spinacia oleracea]) HSP 1 Score: 315.8 bits (808), Expect = 5.100e-83 Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 1
BLAST of Spo09344.1 vs. NCBI nr
Match: gi|731344772|ref|XP_010683593.1| (PREDICTED: LOW QUALITY PROTEIN: CASP-like protein 4B1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 247.3 bits (630), Expect = 2.200e-62 Identity = 131/202 (64.85%), Postives = 160/202 (79.21%), Query Frame = 1
BLAST of Spo09344.1 vs. NCBI nr
Match: gi|595829610|ref|XP_007205904.1| (hypothetical protein PRUPE_ppa011435mg [Prunus persica]) HSP 1 Score: 231.1 bits (588), Expect = 1.700e-57 Identity = 118/183 (64.48%), Postives = 148/183 (80.87%), Query Frame = 1
BLAST of Spo09344.1 vs. NCBI nr
Match: gi|743941096|ref|XP_011015028.1| (PREDICTED: CASP-like protein 4B1 [Populus euphratica]) HSP 1 Score: 228.0 bits (580), Expect = 1.400e-56 Identity = 121/188 (64.36%), Postives = 147/188 (78.19%), Query Frame = 1
BLAST of Spo09344.1 vs. NCBI nr
Match: gi|590627812|ref|XP_007026548.1| (CASP-like protein, putative [Theobroma cacao]) HSP 1 Score: 226.9 bits (577), Expect = 3.100e-56 Identity = 117/183 (63.93%), Postives = 147/183 (80.33%), Query Frame = 1
BLAST of Spo09344.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7Y7_SPIOL (CASP-like protein (Fragment) OS=Spinacia oleracea GN=SOVF_216990 PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.600e-83 Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 1
BLAST of Spo09344.1 vs. UniProtKB/TrEMBL
Match: M5WCU2_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa011435mg PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.200e-57 Identity = 118/183 (64.48%), Postives = 148/183 (80.87%), Query Frame = 1
BLAST of Spo09344.1 vs. UniProtKB/TrEMBL
Match: A0A061EPR9_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_021581 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 2.200e-56 Identity = 117/183 (63.93%), Postives = 147/183 (80.33%), Query Frame = 1
BLAST of Spo09344.1 vs. UniProtKB/TrEMBL
Match: G7KV13_MEDTR (CASP-like protein OS=Medicago truncatula GN=MTR_7g071110 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.700e-56 Identity = 121/206 (58.74%), Postives = 149/206 (72.33%), Query Frame = 1
BLAST of Spo09344.1 vs. UniProtKB/TrEMBL
Match: B9IGK5_POPTR (CASP-like protein OS=Populus trichocarpa GN=POPTR_0016s13590g PE=3 SV=2) HSP 1 Score: 225.3 bits (573), Expect = 6.400e-56 Identity = 119/189 (62.96%), Postives = 142/189 (75.13%), Query Frame = 1
BLAST of Spo09344.1 vs. ExPASy Swiss-Prot
Match: CSPLH_ARALL (CASP-like protein 4B1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_321547 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.300e-46 Identity = 96/179 (53.63%), Postives = 128/179 (71.51%), Query Frame = 1
BLAST of Spo09344.1 vs. ExPASy Swiss-Prot
Match: CSPLA_ARATH (CASP-like protein 4B1 OS=Arabidopsis thaliana GN=At2g38480 PE=2 SV=2) HSP 1 Score: 183.3 bits (464), Expect = 2.500e-45 Identity = 99/196 (50.51%), Postives = 135/196 (68.88%), Query Frame = 1
BLAST of Spo09344.1 vs. ExPASy Swiss-Prot
Match: CSPLG_ORYSJ (CASP-like protein 4B4 OS=Oryza sativa subsp. japonica GN=Os05g0344400 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.200e-45 Identity = 94/175 (53.71%), Postives = 127/175 (72.57%), Query Frame = 1
BLAST of Spo09344.1 vs. ExPASy Swiss-Prot
Match: CSPL3_SORBI (CASP-like protein 4B1 OS=Sorghum bicolor GN=Sb01g038100 PE=2 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.300e-38 Identity = 87/192 (45.31%), Postives = 124/192 (64.58%), Query Frame = 1
BLAST of Spo09344.1 vs. ExPASy Swiss-Prot
Match: CSPL2_HORVD (CASP-like protein 4B2 OS=Hordeum vulgare var. distichum PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.500e-37 Identity = 87/189 (46.03%), Postives = 123/189 (65.08%), Query Frame = 1
BLAST of Spo09344.1 vs. TAIR (Arabidopsis)
Match: AT2G38480.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 183.3 bits (464), Expect = 1.400e-46 Identity = 99/196 (50.51%), Postives = 135/196 (68.88%), Query Frame = 1
BLAST of Spo09344.1 vs. TAIR (Arabidopsis)
Match: AT2G36330.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 87.8 bits (216), Expect = 8.000e-18 Identity = 53/186 (28.49%), Postives = 101/186 (54.30%), Query Frame = 1
BLAST of Spo09344.1 vs. TAIR (Arabidopsis)
Match: AT5G62820.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 74.7 bits (182), Expect = 7.000e-14 Identity = 50/180 (27.78%), Postives = 92/180 (51.11%), Query Frame = 1
BLAST of Spo09344.1 vs. TAIR (Arabidopsis)
Match: AT4G11655.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 65.5 bits (158), Expect = 4.300e-11 Identity = 44/146 (30.14%), Postives = 69/146 (47.26%), Query Frame = 1
BLAST of Spo09344.1 vs. TAIR (Arabidopsis)
Match: AT3G55390.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 52.8 bits (125), Expect = 2.900e-7 Identity = 40/139 (28.78%), Postives = 65/139 (46.76%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09344.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09344.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09344.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo09344.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|