Spo09351 (gene)

Overview
NameSpo09351
Typegene
OrganismSpinacia oleracea (Spinach)
Descriptionfibrillarin 2
LocationSpoScf_03485 : 7411 .. 16537 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGGTACTTAATGTCTGGTAAAAAGATGGCTTATGGAGTTGAAAAATATCACATTAAGAATTGTTGCAGGCTCATTTCCTTTTCTAGAGGAGTATTGATGGTTCTGTTAACCGAATTAGTTGTAGATTGTGCAGTCCAGTAAATCAGATAATAGATGGGTCCAATTCTTGTGAACTGTGAGGTAAATATTAACCTACTTTGTATATAATTTTACAAGACATATAGTCCATGAAAATGCGCAAGGGTACATGTCCTGATCATGTAGGTATGTTTGATCTTGGCTCAATCGGATGTTTTAATCATCTTAGTATGTATTGTTGCATTGATTTCTTGATAGTTATAACGAATTCTATTTTGATTATTTGGGTATCATCTTAGTATTTATAGTTTCATTGGTTAGGTTATTGCATAATCATGGAATGTTAAAAGAATATGGTAAAGCTATAATATGTTAAAAGAATAGGGTAAAGCAACATAATTTAGCAGTCCGTTAATTAATAAACGTTGATTACTCTTCACAACCGTCAACTATAACAGGTGTAGTTTCATGAGCTTATGTGCGTCATGAGCTTGAGTACGTGCTACAAACCGGATCTTGTAAGTAATAGGTGTAGTTTCATGAGATATGCTATAATAGGTGTAGCTTCAACTATAATAGATGTAGTTTCATGAGATATGCTACCCTGTTTCCATTATTAGATTGCTCGCATTTTTGTTGGGCTGTTGCAAAGCTTATAGCTGACTAGGAGTTGGTTGATTTCATTGACTGTTTATGACACTCTTGGGCATATAATTTATATGAGAATAGATTTAGCCATTTAGGTGAAAGGCTGTTCAGAACTGCAAGAATGCCTCAAATAATGTATTAGTTTTTGTGATTTTTTATTGTGTGGGTCAGTCATCAGTGTTGTAGGTGAAATAGAAAGTCTGGATAAAATAGTATGCTTGGTTATTTGGTTCGATGGTTTTTCTACAAGTTTTCGTGTATGAACTTAGTGCCAATGCATACATTATCCGCTGAGTGACCTTCTTAGATGTGATTATACTGTGATATTGAATTACAGATTGGTTCTGGATTTTTAAATAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGGTGTTGATAACATTTGGATTGTAAGTATTTAATGCAAGAGTACTGTTCACACTTTTTTTTTATGTGGGTGTTTGTTATTCCTGACTGGTGTGATCTCATTTTCTGTTTAATTGCAGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGTAAGTTGCATGGGTATTATGGAGTAACTGAGAAATATGAATTCTTATCGTGGAGTTGATTTGATCGATATTCTCTTTGCAGGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGGTATTGTTTCTTTTGTCGAATTTAGCTGGCTTTACATCATGATTTTTAGTTGGATTTTCTTTTGACATCTGTTTTCTTCCTTATTTTAGGGAGTATACATTGTTTTTATCATATGGGTTAGTGTAAAGTTGGGGTGGCTATCTGATACACCAAGCTTGTTTTCAACTTATTTATTATTTATCCGGTCTAATATTTGATATACAATTATATACATGGAAAATGGAAAGGAAATTGCCTTATTTAGCTTATTTAGTTTATTGATAACTTGTCATATCACATGAAACCATTTTCTGCCTTCTTTCATCTGAAGGTTGATGGAAACGTGAAGTAAGACTTGTGGCTTTAAGCATAAAACACTCTAGAGCAACTATTTTCTCCATTCAATATGCTACTTCGTATTTCTCATGCTTGCAATGCTGCTGTAAAGAGTTATAAAGCTTATTTTTTATATTATTGTTTTACATCATGGATTCGTAAAAACTAATTTGGCAGCCTTATACATACATCAACAACAAGAAAAGATAGGCCTGCTTGCAGTAAATTTATTGACGTCCTGATCCGGTTCTCATAAATTCAACAAACCCGTTGATATATAGTTCCTCTTGCAGCTTATGATCGCCAAAGATTTATGCAGCCTGCCTAGCTCAAGCCTTAATCTTCTGTGCTTCATCTCCCGCCATGGCTTGTCTCAGTGCGGAAACGTTGAGCTGTGGCACCCACCTAAGGCACACGATCCCCTTTCCTGATGTCCTATTCACAAAGCCTGGCGGTAAAGCCCATATGAAAGGCAACTGCGCAAGCTCTAGGCCATAAGAAATCTCATAAACTTCATCTTTAGTGAGTTTATACTCACTGCCAAACCCTATATAGATAACTGATCTAGGGCTCTGTTGATCAAGCCATTTGAAGTCTTCAATCCATGTTTCATCTGTGTTTTCTTCTTTCTTTACTTTGGGTGGTGAGAGCAGGCCAACTGGCACCACAGGCTTGTTAATGAGCATCTGATAAAGCTCGATATATTCACCTTCGAACTCTTTGCATCTTCGTACTCCTACTGCATCACCAAACTTGTTTTTAACTTGTTATTTATGTAGTGTTTCTGATTTTTTACTTGACTTGAGAGTTGAGACTTTTTTAATTGTGTTGGACATATTTTTAATTGTATCATATTTACGGAGTAGTATACTTGGTGTTTCTTTTCTTCGTTTTTATTGTGTTTTGATTAGGAGACCAAAATGCATCGCTTTTAGCCTTTTACCGATGGGCATCGCGCGCGGTCCGATCCTAGTTATACTAAAAGAGAGGAAATCAATGTGGTGATGACAAATGTCACTCATTGATTGGCCTCTCTTATAGGTATTACAAAAAATTATAAAATAAAATAAAATAATTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATNGCCTTTTACCGATGGGCATCGCGCGCGGTCCGATCCTAGTTATACTAAAAGAGAGGAAATCAATGTGGTGATGACAAATGCCACTCATTGATTGGCCTCTCTTATAGGTATTACAAAAAATTATAAAATAAAATAAAATAATTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATNTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATTTTAAAAAAAAATCATTCTATAAATAAGGAATATTTTTTAAAATTATATATCTTTTCTATATTTGGTAACAAATATAACCAATATAAGTTTATATTTTTATATAAAAAAAAAATTAATCCATTATACGGAGTACGTAGTAAGATTTTTAGAAAAATTTAAGAGTAGTCTACTTATTTGTATTTCGTATTTACATAATTCAAATACAAATAAATTAGAAAATCAATCAAGTATTAATAAGAGTGNTAATTCAAATACAAATAAATTAGAAAATCAATCAAGTATTAATAAGAGTGTATAAAAAATTACAATAGTACTCTATAATATTTTAACAACTAAATGCGATAATTATAACCGTCATTGATTGTACTATTTTATACGTAATATATTTAGCCACTAAATTTGATATTTATCACCGTCATCGATAGTAATATTTGACTACTTTAAAAAATATTATATAACTTCGTTAAACATGAGAAAAACTTGTGTACTATCTATCTACTACTTTACTACGTAATTCCTAAATTTTTTAGATGCGGCTATTTAATTTTAACACTAGCTGTTATATTCACACATACCTATACCTTTTCTGTTTTTTGGTGATTATTACTACTTTATGATAAACATAGTCATGTCTCCGTAGCATTTTGTTGAATTTGTCTAAATACTTACATGATACTACTTTTTAATAATTTTTACTAATCGATAATTTAATTAAGATATTAATAGTTGAAGTTATTTACTAATAACCGTGAAAATAAAACTGATTTATCCAAAAAAATGGAAGAAGGTGTAAACAAGAAAAATGATGAGCGACTACGTAGTCCTCTCAACTTAAAAAAGCTCCTCTAAATATTTTAGGCTAATCAATTGACTTACTCCATATATTTTAGCCGATTTTTAACAAACGTATGTATACGGAGTACTATACTAAAAGTGAGGCAAATTGATATGGAGATGACAAATACAACTCTTTTTGCCTCTTTTATAATATTGGTAAATAACCTATGATAAAATAATTAATATACTTTGTATATATTTTACCTAAAATCTCTAATTACTTATGGTAATAATCGATTATACTACGAATTACTTATTTACTCATGTTAATAAATTTCTTAATTTTAAATCTATATACTCTGTACTATACTAAAAGAGAGGCAAATGGATGTAGAGATGACAAATGTCTCTCTTTGATTTGCCTTTCTTATAACATAAATGATGACTAATTTGTAAGTACTATCAAGTTTCGTTTAGAAACTGTGTCATATATTGAGTACGAATATGTTCAAACGTTCCTTTGATCGGTTATTATTTGTAATCTAATGAAAAATCTTCGCATACAATTCTTGATAACCGATATGGAAAATCTTATAATAGTTTAACTTGGACTATCAATTATATTATTGTAATACTATCAACTTTTTAAAAATTTGTGTCATATAATGAATACGAATTTCACAACAAAAGTTAACTATTGATTTAATGTATTTAGCAAGGTCGTCTCAAACATTTTATAGGCCCTTTGTTAACTAACAAAATGAGCCCCTAGCCATATACTTTGTTTCGTACGAAACATATACTTAATCTTAAATATCAAAAATAACTTTGCCACATTCTCATTATCGTAATATTTTTATATGGAGCACGGATAATAATTTATTCGTTCATATTATTGAAATGTTAAGAGCATGTTGATTGAAATTTTGATTAATATATCGTAATCAACTATATCCAAAGTCATAAGATCTAGATAATTAAGTTTCCTTATTATTACTCCCTCCGTCCCTTAATACTCGACTTATTTTGACCGGACACATTTGCCAATGCATAACTTTGACCACCAATTTCTTTAACTGCATGTTATAAAATTTATAAGAATATTAATATTTTGAAAATATATATTAATATGAAGCCAACAATATATTATATACTAACATTTGTTTTCATATACTAGAAATAAAACGAGGTCAAAGTGAATTATGTGAATATTGCAAAAAGTCAAAACAGGTCGAGTATTAAGGGACGGAGGTAGTAATATGTTTGCAATAACAAAATACTTTTTATATATTAATGTGAATGATTTCAATATCACTTTAATATTTCGTGCAAAATAAAATTTATATATGTAAATGGTGAATCACATTTGATGATGGGGTGACTTTGGATTTTAGATTGATCTGAGGACAAAGTTAAACGTAGATGATTGACTAATGTTGACTAACAAAAAGAGATTTTGGTGGATGGGTATAAGGATAACATGTACCCACCTTGGTGATGGGGCGAGTTTGAATTGATCGGATTTGAGAATACTCACACAATCCTAATTATGTATGTCACTTTTAAATATTTTTTTCAATATTATAGCTAATACAATCAATTTTGATAGTTTGTAATAAACTTATGTCACTATATTTAAAATTTAGTTGAAAGAATAATTGGATTTTTATGGAACATAGTGATGTCAGAGTGTCAGTTGGCGAGGTTTTGGGAGATCCCCCGGTGCATCCGCCCCAAGTGGGTGGCGATGGAGGAAAGTTTATTGGGTGATGGGGTTAAAAAATATAATTGTCGCGGGTGAAGGGGTGATTTTGGATTTTAGATTGGACCCGCCTAAGTCGTTAATATTTCATCTGATTGATTATGAATATATAAAAAAAATGTACTATTAACGTATAATGTTTTGCTTATTTACTCAGTAACACTAATTAGACAAAGAATTTTCAGATGCTCTATAATAGATTTTAAAATTCAAAACTCTTTTACCAAAAAAAAAAAAAAACGAGTCTAGGGGTGGGTGTGGATACACGGGAAGGGAGGTAATGAAGAGGGGGTGAATTTTATTTTGTACCTCTCGAGACGGGGGATCGGGAGGAGTGGGTATCGTTCCAATCGTAGATGGAGGGGATGAAGATGAGAATTATAGGCGGGTGCGGGTGTGCAGGCTCTGTTCCATCTCAAAGTTATCTCTAACTCAATAAAGGAAATGGTCTAGATAGGTGTTAAGTGATCGGGTAATGAGGTTGACGGGATGACTGTGCGAGTATTAAGTGGGTATTACTATCGAAGTGAAGGGCGGGTGAGATAACATGATGTTAGACACAAATACTGGTGAATGAGAATGAAAATAATTTTATCTATGTACCCTTATTTGTTTTAATTGCTTAAGACACCGAATGAGCAATAACAAATTTATCCATCGTTAATTATTTTTTATTTGGAGAATATCTATAAACTCTATTTTAATGATAATTGTATACCAGATTTCATATAAATTTATATTTAGGTTATAAATCGTGCATCACACGAGTACTATATTAGTCATTTTCTAAATACTAAGTACACCGGGTGAGGTAGAAAGTTAAAACCAGAAACAAAGGCGAAAAGCCGAAGAATCGATCACATGATAAAAACTTCCGTAAGGACAAAATTGGGGCCATGTTATTAGTGAAAAATGGAAATCGAATCTCATAATTATGAATATCAATAGCATATCGTATTATCATGGATATTCATGGACCACTTCATGGCTTTAAGTCCCACAAATTTTAAGTGGCAAAAATCGATCCAATTATAAATTGATACCTTCCAAGATATATAGAAATAAATTAATATGAGCACGTAGATTTGAGATTGAGCCCTTAAAATACAACTCTTTAATTTCGTATGTCTCTGAAGGTGTCTTTTTTGGTTTTTGTTAGAGATAATATTTCATTTTAATTAGACTAAATGCAACTTAAAATACTATCACATCTCAATCTTTAGTTTCGTTATTTAGAGCTTTGGCACAATTTAATTACTAACTAGTTTTTTAGCCCTAGCGATGCCCCGGATTCCTACATTGATAGCATTCACAATTACTTATATATTTTATTTTGTGATAACAATAGTTTAGTGGTAAAAGATTTATTGTTTAAACACAAGGTGTAAGGTTCAAACCTTCACGTTTGACATTTTTTTTTTTTTATGTATGTGAAGATTACATGGAACGAAAGATCCATAAACAGAGCACCATATGTTATGTATATTTTTTTATAGACGCTTTTTAATATATAGTATAGAAGTCCATGCCCTTTGTAAGACCCCCTTCCAAGTTCCTCGCAAGTGCCCCAACCCAAAAGAAAAGAGGGTAAAGGCATTAAATTAGAGTGAGAAAGAATGATAAGAAATGGAGCCAATTTCAACTGTGAAGAAATAGAGGGGCAGCTGCTTACATGACTTGATGACTATACTCAAAAGAAATAAAGTGCCCCAACTCTTTCATTTTCCTATATCAAATTAAGCTTGTCTATCTCAACTAATTCAATTCCCATTTTTAGTTATTGTATGTAAACCCTTGACCTTACAAGGATCAAGTAATGTAGTAAGTTGCACTCCCTGGAGAAGAGGGACGATTGAACATTTTACCTCCAAGATGCTCTCCTATGTCAATATCAGTCGTTAATTTATCACTCACTAGGAGGTCTAGGAGTACGTTTTTACAAATCCTAATTATTATGTAGTATACCACACACTGTACTGAAACCCTTCAAAGTTGATGGATATATCCATGAGTTGATATGTATACTTGGGTCGGGTTGACGGGTATCAAGTGGGGCGGGTACAGATGGGGCGGGACAAGCCGGGATGGGGTGGGTCCAACACACAATCCACACCTGCCCAATCACTCATGACGAGTATAATTTTTATACCCATCCGGGCCATCCCCCCTTCACCCGCCAAACCTCCCCCATCCCAGCCTATTNAATATCAGTCGTTAATTTATCACTCACTAGGAGGTCTAGGAGTACGTTTTTACAAATCCTAATTATTATGTAGTATACCACACACTGTACTGAAACCCTTCAAAGTTGATGGATATATCCATGAGTTGATATGTATACTTGGGTCGGGTTGACGGGTATCAAGTGGGGCGGGTACAGATGGGGCGGGACAAGCCGGGATGGGGTGGGTCCAACACACAATCCACACCTGCCCAATCACTCATGACGAGTATAATTTTTATACCCATCCGGGCCATCCCCCCTTCACCCGCCAAACCTCCCCCATCCCAGCCTATTGAGGCGGATGCGGGACGAGTCTCCCATAAAACGCGCTCCACTGACATCCTTAGTCAACCCACTAATCATAGTATTCTTTAGGTATATTTCCGTCAAAAATAGATACTTGTATGACAAATGATATTAAACAAATCATAACTAAAATAAAAAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

mRNA sequence

ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

Coding sequence (CDS)

ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

Protein sequence

MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSWQLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDDGPVPMEYSPVSLQEHSSGSMVDSTCSYESPAVVSRGKSPLKLALSRKGDRVWKWVKNICPAKRKLSCENGVDRQIGVKNKEGDSCLCCPFLFPLKKKAVLLGFCFGEEKPLCGTWFR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09351.1Spo09351.1mRNA


Homology
[Close]
BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902183174|gb|KNA10070.1| (hypothetical protein SOVF_147810 isoform C [Spinacia oleracea])

HSP 1 Score: 235.0 bits (598), Expect = 1.800e-58
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 1 

		  

Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNN 160
           PITEDARHPAKHRMLVGMVDVIFFDVAQPD QP   +NN
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPD-QPYTYINN 258
[Close]
BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902183173|gb|KNA10069.1| (hypothetical protein SOVF_147810 isoform B [Spinacia oleracea])

HSP 1 Score: 233.0 bits (593), Expect = 6.700e-58
Identity = 123/151 (81.46%), Postives = 126/151 (83.44%), Query Frame = 1 

		  

Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 152
           PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 251
[Close]
BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902236242|gb|KNA24281.1| (hypothetical protein SOVF_016890 [Spinacia oleracea])

HSP 1 Score: 163.3 bits (412), Expect = 6.600e-37
Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           +QPGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 151 IQPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 210

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 211 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 243
[Close]
BLAST of Spo09351.1 vs. NCBI nr
Match: gi|6003681|gb|AAF00542.1| (fibrillarin homolog [Arabidopsis thaliana])

HSP 1 Score: 162.9 bits (411), Expect = 8.600e-37
Identity = 82/106 (77.36%), Postives = 89/106 (83.96%), Query Frame = 1 

		  

Query: 53  GIPSDLSWQLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNM 112
           G+  D  W     ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNM
Sbjct: 135 GVDLDNIW-----IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNM 194

Query: 113 AKKRTNVIPITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           AKKRTNVIPI EDARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 195 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 235
[Close]
BLAST of Spo09351.1 vs. NCBI nr
Match: gi|297792583|ref|XP_002864176.1| (hypothetical protein ARALYDRAFT_495317 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 162.5 bits (410), Expect = 1.100e-36
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 140 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 199

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 200 ARHPAKYRMLVGMVDVIFSDVAQPDQARILGLN 232
[Close]
BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS47_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147810 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.200e-58
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 1 

		  

Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNN 160
           PITEDARHPAKHRMLVGMVDVIFFDVAQPD QP   +NN
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPD-QPYTYINN 258
[Close]
BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS27_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147810 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.700e-58
Identity = 123/151 (81.46%), Postives = 126/151 (83.44%), Query Frame = 1 

		  

Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 152
           PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 251
[Close]
BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016890 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.600e-37
Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           +QPGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 151 IQPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 210

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 211 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 243
[Close]
BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: D7MS52_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495317 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.800e-37
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 140 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 199

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 200 ARHPAKYRMLVGMVDVIFSDVAQPDQARILGLN 232
[Close]
BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: V4P5H1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025746mg PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.300e-36
Identity = 88/127 (69.29%), Postives = 99/127 (77.95%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFL-APRHPPVNVVNNPD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +        +L+ N FL +  H  +++  N  
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARI-------LALNANFFLKSGGHFVISIKANCI 271

Query: 186 DGPVPME 192
           D  VP E
Sbjct: 272 DSTVPAE 271
[Close]
BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: MD36B_ARATH (Probable mediator of RNA polymerase II transcription subunit 36b OS=Arabidopsis thaliana GN=MED36B PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.200e-38
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 141 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 200

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 201 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233
[Close]
BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: MD36A_ARATH (Mediator of RNA polymerase II transcription subunit 36a OS=Arabidopsis thaliana GN=MED36A PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 2.700e-38
Identity = 88/126 (69.84%), Postives = 97/126 (76.98%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  + N S  L   G     H  +++  N  D
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARILAL-NASYFLKSGG-----HFVISIKANCID 271

Query: 186 GPVPME 192
             VP E
Sbjct: 272 STVPAE 271
[Close]
BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_RAT (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus GN=Fbl PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 163 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 222

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 223 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 255
[Close]
BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_MOUSE (rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus GN=Fbl PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 163 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 222

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 223 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 255
[Close]
BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_HUMAN (rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens GN=FBL PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 157 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 216

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 217 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 249
[Close]
BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT5G52470.1 (fibrillarin 1)

HSP 1 Score: 161.8 bits (408), Expect = 6.700e-40
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 141 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 200

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 201 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233
[Close]
BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT4G25630.1 (fibrillarin 2)

HSP 1 Score: 160.6 bits (405), Expect = 1.500e-39
Identity = 88/126 (69.84%), Postives = 97/126 (76.98%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  + N S  L   G     H  +++  N  D
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARILAL-NASYFLKSGG-----HFVISIKANCID 271

Query: 186 GPVPME 192
             VP E
Sbjct: 272 STVPAE 271
[Close]
BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT5G52490.1 (Fibrillarin family protein)

HSP 1 Score: 132.1 bits (331), Expect = 5.700e-31
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 1 

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PG KVLYLGA+SG  VS VSD+VGPEGC+YAVE S   G+ L+NMA+KRTNVIPI ED
Sbjct: 131 IKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIED 190

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVD+IF DV  P+Q  + ++N
Sbjct: 191 ARHPAKYRMLVGMVDIIFSDVNHPEQANILSLN 223
The following BLAST results are available for this feature:
BLAST of Spo09351.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902183174|gb|KNA10070.1|1.8e-5879.2hypothetical protein SOVF_1478... [more]
gi|902183173|gb|KNA10069.1|6.7e-5881.4hypothetical protein SOVF_1478... [more]
gi|902236242|gb|KNA24281.1|6.6e-3786.0hypothetical protein SOVF_0168... [more]
gi|6003681|gb|AAF00542.1|8.6e-3777.3fibrillarin homolog [Arabidops... [more]
gi|297792583|ref|XP_002864176.1|1.1e-3684.9hypothetical protein ARALYDRAF... [more]
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BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QS47_SPIOL1.2e-5879.2Uncharacterized protein OS=Spi... [more]
A0A0K9QS27_SPIOL4.7e-5881.4Uncharacterized protein OS=Spi... [more]
A0A0K9RXN3_SPIOL4.6e-3786.0Uncharacterized protein OS=Spi... [more]
D7MS52_ARALL7.8e-3784.9Putative uncharacterized prote... [more]
V4P5H1_EUTSA1.3e-3669.2Uncharacterized protein OS=Eut... [more]
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BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
MD36B_ARATH1.2e-3884.9Probable mediator of RNA polym... [more]
MD36A_ARATH2.7e-3869.8Mediator of RNA polymerase II ... [more]
FBRL_RAT1.0e-3474.1rRNA 2'-O-methyltransferase fi... [more]
FBRL_MOUSE1.0e-3474.1rRNA 2'-O-methyltransferase fi... [more]
FBRL_HUMAN1.0e-3474.1rRNA 2'-O-methyltransferase fi... [more]
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BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G52470.16.7e-4084.9fibrillarin 1[more]
AT4G25630.11.5e-3969.8fibrillarin 2[more]
AT5G52490.15.7e-3167.7Fibrillarin family protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000692FibrillarinPRINTSPR00052FIBRILLARINcoord: 69..90
score: 1.1E-33coord: 119..148
score: 1.1E-33coord: 94..111
score: 1.1
IPR000692FibrillarinPFAMPF01269Fibrillarincoord: 64..158
score: 1.8
IPR000692FibrillarinSMARTSM01206Fibrillarin_2coord: 44..175
score: 2.1
NoneNo IPR availablePANTHERPTHR10335RRNA 2-O-METHYLTRANSFERASE FIBRILLARINcoord: 67..151
score: 1.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0016310 phosphorylation
biological_process GO:0006486 protein glycosylation
biological_process GO:0030433 ubiquitin-dependent ERAD pathway
biological_process GO:0016571 histone methylation
biological_process GO:0006325 chromatin organization
biological_process GO:0006281 DNA repair
biological_process GO:0009909 regulation of flower development
biological_process GO:0009637 response to blue light
biological_process GO:0007165 signal transduction
biological_process GO:0008643 carbohydrate transport
biological_process GO:0009932 cell tip growth
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0097502 mannosylation
biological_process GO:0048653 anther development
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0009926 auxin polar transport
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0007389 pattern specification process
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0008361 regulation of cell size
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0048767 root hair elongation
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006490 oligosaccharide-lipid intermediate biosynthetic process
biological_process GO:0006397 mRNA processing
biological_process GO:0048856 anatomical structure development
biological_process GO:0001510 RNA methylation
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0008033 tRNA processing
biological_process GO:0016567 protein ubiquitination
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016579 protein deubiquitination
biological_process GO:0000338 protein deneddylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0033043 regulation of organelle organization
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009640 photomorphogenesis
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
cellular_component GO:0016592 mediator complex
cellular_component GO:0016020 membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0005829 cytosol
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0005768 endosome
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000136 alpha-1,6-mannosyltransferase complex
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0005802 trans-Golgi network
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008374 O-acyltransferase activity
molecular_function GO:0004620 phospholipase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0017069 snRNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0052926 dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
molecular_function GO:0052918 dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0000035 acyl binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003913 DNA photolyase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0009881 photoreceptor activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0030515 snoRNA binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0004377 GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo085460.74Barchart | Table
Spo237510.74Barchart | Table
Spo121620.73Barchart | Table
Spo112960.72Barchart | Table
Spo197220.72Barchart | Table
Spo003460.71Barchart | Table
Spo119670.71Barchart | Table
Spo267380.71Barchart | Table
Spo236640.71Barchart | Table
Spo126230.71Barchart | Table
Spo300230.71Barchart | Table
Spo044480.70Barchart | Table
Spo148490.70Barchart | Table
Spo037160.70Barchart | Table
Spo002490.70Barchart | Table
Spo190890.70Barchart | Table
Spo229060.69Barchart | Table
Spo268330.69Barchart | Table
Spo196370.69Barchart | Table
Spo196350.69Barchart | Table
Spo117440.69Barchart | Table
Spo104270.69Barchart | Table
Spo021070.69Barchart | Table
Spo179590.69Barchart | Table
Spo074260.68Barchart | Table
Spo004730.68Barchart | Table
Spo025250.68Barchart | Table
Spo026470.68Barchart | Table
Spo036620.68Barchart | Table
Spo048650.68Barchart | Table
Spo051270.68Barchart | Table
Spo085400.68Barchart | Table
Spo110950.68Barchart | Table
Spo112660.68Barchart | Table
Spo160730.68Barchart | Table
Spo200110.68Barchart | Table
Spo247130.68Barchart | Table
Spo249980.68Barchart | Table
Spo252920.68Barchart | Table
Spo268140.68Barchart | Table
Spo101560.67Barchart | Table
Spo184510.67Barchart | Table
Spo135160.67Barchart | Table
Spo261900.67Barchart | Table
Spo082720.67Barchart | Table
Spo106730.67Barchart | Table
Spo161390.67Barchart | Table
Spo228180.67Barchart | Table
Spo018730.67Barchart | Table
Spo058740.67Barchart | Table
Spo223860.67Barchart | Table
Spo227610.67Barchart | Table
Spo121560.66Barchart | Table
Spo141730.66Barchart | Table
Spo144380.66Barchart | Table
Spo148560.66Barchart | Table
Spo157620.66Barchart | Table
Spo159110.66Barchart | Table
Spo099490.66Barchart | Table
Spo185190.66Barchart | Table
Spo187110.66Barchart | Table
Spo068160.66Barchart | Table
Spo066810.66Barchart | Table
Spo213510.66Barchart | Table
Spo237940.66Barchart | Table
Spo013990.66Barchart | Table
Spo257630.66Barchart | Table
Spo135790.66Barchart | Table
Spo121550.66Barchart | Table
Spo121760.66Barchart | Table
Spo123400.66Barchart | Table
Spo055570.66Barchart | Table
Spo237270.66Barchart | Table
Spo029600.66Barchart | Table
Spo060410.65Barchart | Table
Spo177790.65Barchart | Table
Spo268060.65Barchart | Table
Spo011840.65Barchart | Table
Spo160820.65Barchart | Table
Spo142750.65Barchart | Table
Spo241050.65Barchart | Table