Spo09367 (gene)

Overview
NameSpo09367
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNucleolar protein 12, 25 kDa protein
LocationSpoScf_01466 : 19771 .. 27556 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTACACAAGAATGACAATCGGGCTCTAAGGAAAGCTAGGTCTAGAAGGCCAAAAACCCAAAAGAAAAACCACAAACAAATTTCACTCCTTCCTTCCCCAGTCTCTCTCCTTCTTCTCATTCTTCTGGGAAGGTGGCAATGAAATCGGAGGCGGAAGGCGCGGTGGTGGGGAAGCCGCCGGTGAACAACTCGCAGCATATCAGCAAGAGAGCTCTTCGCAACAAATCTCTCTCCGTCTCTTTCAACGAAAAAGATTTAAGGTAGCCCTCAAATTTTCAATTATATTTGAATTCATGGTTGTTAACTTATGTGTTAATTAAAGTGATTCAATGGTGAATTTTATGAGTTTCTAAACCATATTATTAGTTTTAAGAAGCATAAATTATGCCCGAGATAGCACTTAATTTATTTTTATTAATCACTATTTAGCTCTAAATTGAACTGTGTTGATGAGGTATGATTTGGGTTGGTTTATAAATTTTTGATTACTGGGAGAAATTATTGACAAATGCTGATTTTGTTTCTCGAATTAGGCTAAATACTTAAAAAAATTGATTGTGTTTGCTTAGAATTGTTAGGTTATTGATGAATATTGGGTTATTTGAAGAAAAGTAGTAAGGATTGGAAGAAGGTTAATAGCAATAGCAGTAACTGGAAATGCTAGTGGAAATTACCAAACTGAATGGTGAGGTGAGGAACATGACAATATATTGAAGAATGATAATATCGAAATAAGTATAAATTGATGAAGTAATATTCGGTAACGATGATGGTAAATCATCTCCTCTGCCTTTGGATAACAGGCTCCATCAGCTTGACTCTGGTACCAATATTATTCTTATCTTCTTGAAGGGTTGAAAACTCAAAATACAGCATTGTTCGTAACTTATAGAAAAAGGAGTTGAAGTACATTACAAGTTCTGAAATATAGCTGAAACTGTGGAACTGAACAATCCAACTCAATTTGAGTTTCATGACAGTAACAAAAAGTAGAGTTACATTGAAGATTAATAGCGCGGAGTAAAAAATTAGGAAATAACTGTTGCAGCAGAAAGCTTCTACCTTTCATCTTGTTTTTCAGTCGAAATTCAGTGGATCAAGCTTGGATTTGTAATTAGAGTTTCGTTCTTGAGTAACTACTGCATTCCCCAGGACTAGTAGTCTAGCACTCGTAGCATGGAGCATTGCTTCTCAAAAGTGTTCAAAACTTCAAATCTATCCTGTCTTTAGGATTACATTTCTTCATTCTATTCTTTCTATTATGACCATGAACCCAAAGTAGCTTCTTCAGTTCCTCCATCAGTATCTTGTGGTTTTGTGCACGATTAAGTTTTAACAATATGGATAGCGAATAACCTGTGTGTCTCAGCCTGGGTTCACTTGCTTACCTTTGCTGAAATAAGAAAATTTGGCTCAGGTCTTTAGGCGATATGAATTTAAGGATTTGATGAGCGAAGAACTTGTTGAGGCTTGAGAGATAACTATGGTTTCAATTGGAACAGGGACTATGTAGGTGGATTCCACAAACGAAAGAAGAAGAGGAGAAAGGAAGCTCTAAAGCAGCAAGGAGAAGCAGAAAGACGCAAGCGCCTCGAGAATCGTAAGAAGGTGGATATTTATTCTGTTTAATGTCATTATAACCCTTTTTTTATGTGACTATTGGTGTACTTTGACTGTTCATTTTCCAATTATCATACATTTTGAGTTACTGAGAACAGAATGCTGAAAGGCGTACTTCAGTATAGATTTTTTTGATATTTGTATGGATTTTTAGCCATACTTGAGATACACTCCTTGTTGTTATCTTTGTGTGTGTATTGTAATTGTCACGGAGGCTTCACTATTCAATATATGTAGGAGAGGAAGGGAAAAGACGCACGCGCTCGCAAAACTTGCCTTGGTTCGGGAAAGAGAAAGGAAAATGATAATTAAATGGAAAGATTTGACTCTTTTGGGGTGATAAGTCTCTAGGGAAAAAGGCTTCCACAAGAGGTTAGCTGAGTACAACACCTAGTAATTAGGAACTAGGCTAACCCATGGTCATAACAATATTTTGTTTGATTATAAGCTCACTGGGTATGAGGTTTCAGTGAATGATTTCAGCTATCTTAACTAAGACATTCTTTTGGTTATGCTGTGAAAGGCATCTAGATAATCTTGAGCTATAAGAAATAAAGGGATATGAACTGAAGGAACTAAGGATATAACCAATAGAACTCCACCTCCTCAGGTAATTCCTTCAATGAATCACTGGTTCAGACAACTGGGCGATTAACCTTACTGGAGAAAGCAAACACTCTTAGGGGGCGTTTGGTTCGCAGATTTTCTGGAGAAAGCAAACACTCTTAGGGGGCAAAATCTATACCTTGTGTTTGGTTTAGAAAATGAAAATTTCTAAACCCATACCTCAAACCCACAAGTATGGGTTTCAGAAACCCAATGGGAAGGTGGGTATGACTCATACCACACCTTTAAGTATCAAATAAAACAAAAATATTCATTCCCGTATATACCAAACACATGGAATTGGGAATGAAGTTCCAACTCCATACCACCATTGTTTCATTCCTGATTCTAAACCCATACCACTATGCGAACGAAACGCTCCCTTAAGGGTATGAGTGTATAACTTATGGCAATAAGGTTACTTATTTGACCACCCTAATTTTGATTTTTAGGATTATGATTTCAGAATTCAGTTTCGGAGAACATGTTCGCAACTCTTTTCATATATTCACCTCATCTCACTGAAAAATAATCTTGGGAGTTGAGCTACCAAATCTTCTTGAATCCTTGTGAAGCTCTAATGATATCATCATTTCTTCTTAGTCTGTCCCTTTGTCCCTTCAGGGTTGATTAAAATTCATATTGTGAGCTTCAAAACTCATTCATCATCCTAAAGCGTAACCAAGTTAGATTAGATGAGCATGCTAATCTGGACCTGCATGCTTGAGTTTCATGGGACTGTTTTAACAGTTAACACCTGTTCCATGTTTGTTCTTTCTTTTTTGTAGGAACTGCATCATTTATCTTTTTATCTCCATATTGTCCCATTTCAGATCTGAACTAAGTGTAACTTTTACAACCTCTGTTTCACAATACGTGCATTGTATTTCTTTTTGGGATGTTTCATAACACCTACATTGTTTCCTTTTTTAGTACTTCCTTTGACCCAGAAAGGTGTTTGCACTCACCTTTGCCCATTGTTTTAGTTGTAAGTGGTTGTTTGATTGAACGAGAGAGGTTGTCGAGACCAAACATTTTAGTAGTGGCGAGTAGGAAGATAGAGGTATTAAAATATTGGTGGTGCCGTTCCTAAAATGGAAGTGTAAACAATATTTTGCGACGTTTCAAAAAGGGAAGTTAAAATAATATTTTGGGACGGGAGGGAGTAATTTATTTTGGTGAAATGACCTAACTACCTTCACTTTTCCCTTTATAAAAATACTTGCTTTCTCTCTCCTCCAATCACATGGGCAAAGAAATGGTGCAAGTATTGTGAAATGGTGGTAGTATTTTGTATGCTTGAAATCTTGCTTATTTATGTTGTTGAAAGATTTAAGTTAAAGCTTTGGAGGTGGAATTGTGTGGGGGCAAAGTGATGTCCACCAGAGAAATAAAAAGAAGTTCCTTGAGATTTGTTTGTTTTTTCCGTATTGCTTTGTACTCCGTATTTCACTCTATGAGAAAGTGAATGTATGCCAAATTAAACATGGATGTGTGAAGATCCTTGTGTTTTTAGATGTCTAGTTCCTCCACTACCTAAATGCATTGGAGCACCATACTTTAAGTTTTTGATGTATACAACATCCAGCTCCTATTACGATATCGTGTCTTTAGGATACAGGCTGACTAACACCACGTTTATGAAACTTGAAGTGTAAATTGTGCTCTGCCTTGTCATAAAGCGCAATGTTTAGACCATATGTTGGTGAACTATCGACCTTAGGGAATATTCTTCTTATTCCTTTAGGAGATATAATAGGCATTACAGGAATATTTTTGGAATTTCTGGTAAGTTGGGCAATGGTTTGTCGGCCAAAAGAAGAAGAGGGTCTGGGCTTTGGGAAGGTGGTGTCAAAAAATATCACTCTGGTGGGGAAATGGTTGTGACTCTAAGTCATAAAGAGCAAACATGGCTTGCAACCAAATGGGTTTTGTGCTCAAGTTTTCAGACTTATCTTTCCTTTAGTGAAGTTCAAAGTGGGAATGGTTGTAGTGTCGTTATTGGGAAAATGTTTGGAGGGGAGAGCAACCTTCATGCGTTCAATTTCCTCAATTATTCCGGTTGACGTTTCTACACAACTCACACTCAGTTTCTATGGTGACAACGCATGGGATTTACATTTTTGAAGGCCACCACTTGATAGGGAGTTAGAGGAGCTTCCTTCGCTGCTAGGGGATCTGGATCTACAATTAGCTACAGTAGCGAATGCTAGAGTGGGGATTCATCAGGGTTGTTCTTGCAAATCTTTTCTGGTTCACTTGAATCGACCCCCTAAGTTCCACCTTTTTCTAGTAGCAAATTTCATTTGGAAGGCCAAGGTACCTGCAAAGGTAAGGGCCTTTGTGTGGAGATTGGCGTTAGGTATTATCAACACTAATGACATGCTCCAAAAGCGTAGGCCAGGTTTGGTTATTTCACCGGATATGTGCTTGCTTTGTCGCTCTAATAGTGAGTTATGTTCACATGTTTTCTAACATTGTAAAATGGAAAGTTACCTTTGGAGGAGGTTGTTTGCGCCTCATGAGGAAAATTGGGCTTTCCCTTTCAAATATTCTTCAGGGGGTTTGGTAAGGGTAAGGACAAGAGATTGTTATGGCACAATGCTTTCATGACAATTGTGTGATGTGTGTGGTTGGATAGAAACCCGAAGGTCTTTTCATGTGGCTCGTTACCTTCCGAGTTGTTGTGGAACAAAGTCACTTTTTTAGGCAGGCGCCTTTTAGCATCTTTATGGGCCAAGGCCAGTGGATCTTTCAAAACTTACTCGGTTTGGGAGGTATAAAGAAATTGGGGAAATCTGTAATTTTGCTTTCTTGTTCAGAGGACAGCTTGTCCTCTTACTGTTAATATAATATTATCTCTTTTCTTATATAATTTTTTTTATTACTCGGAATATGTTCTACAAGGTTTCGTTTTTAAAATTGTATATTAGCTTGCAAAATGGGCTTAAATGTTGTATAGCTTTTCCAGTCCTATTTTATGAACAAATGAAAGCTCTGTTAGATAATGGAATTGCCTATCAGTTTTTTTGCTTGATTCAGCTCCTTGCTTGAAGTTAATCCTTTGAGAGATGATGATTTCTAAGCAGATCTAGACCAGCCTTTTATTTTTGGTGTTGTAAGACTTGAAACTTGGTTTCCTCTTTGTCACAGATGAGGGCGGATAAAGAATTTGCACTTTATGGTGGTGCACCTCCTGAAGATGATGCTAAATCTGTTGGTGAAGATCCGGAGCAAAATGATGCAGTGGAGCTGAACCCATTGGTTTCTGGTATTGTCTCATAATCTCTGGTTCTTTAATCTTTCATTATACAAAATTTCTTCATTTTGTGTGCGGCTTTAACGAAAGAAATAACTGATGCCATGTTCCATTAATTGTTTTTGACTCGTATGATTGATTGTAGCTTTTGGTCAATATTTCAGTGAGATGTCTCTTTTAGATGGATCGCTTTAACATCAAAACATGGGAGTGTTGGACACTCAAATGTTAGGGTTTCAAGTTTTAAGGTCTAGTAGAACGATAACATCGGGAAATTGTAGCATACATTAGTAAATAGTACGGAGTATGATTTAAGCATATTTCATCATATAAAATGACAATTTTTAGTTTGAGTATTATTAAAACTGAGTTATTCTGCTTAGGGGTTCCGAAGTATTGAACCACAATCGAGTATCCATGTAACTAGTAGAATTAATGTTCCATTCATCTCTCTATGGTAACGTTGAGAAATAACGCACTTATTGAGGAAACCCATGTGACGAGAGAGGGATGGGAAACTTTTCCCACGTATAGAGACGGACATAGAGAAATCATCTACCAAAAAAGTATGTTAACTCTATTGTGAAACAAACAAAAGACAAAGTTTACTTAAATTAAAAAGACAAATAGAGTATAATGTATGTTTAAGGAATTTGTATGTAATCACATCTATAGTACTCACTGATATTTTTGTGTCCCATTTGCTTATTCGGCTCACATCTGACAGTTAATATCTTTAATTGTTTCAATAAAATTATAAAAAGTTGATAATACACATTAAAACAAACTTAACAAGTCCCAATTTCCACATGATGTTTTTTTTCTCTTCTACATCCAAATAATTGAGGCTGAGGAGTAGGGTGTCGTAGTATTGTCTTTAAGGGAAGGCAATCCAACGCTTCGACTTGGGGAGAAAAGCTTTTTCTTATATAGTTTAAAAGTTTCTTTCCGTTGCTTCTTTTGGTAATATTCCCCATATTTCGAAGTCAGCAATGAATACTTAGATCTTCTTACTGATGACGGTAAACCAATCAACAACGAATACCTAGATCTTCTTACTGATGGCAGTAAACCAGTCAGCAATGAATACTTTGATCTTCTTACTGATGACAGTAAACCAATCAAAGGTACTTGAATGATTCATATATATTTTGTATACTCCAGTCCACCGAACTTTGATGTGTGTCGTCGTTGGCAACCTCGAAAAGAAACTTTTGTTAAAGTTTCAGATGCCAAAGTTGATAGTGACAAGATTCTTATCTAAAAAAGCAGATTATATATCCTTTCAGATGAATGATTTCCTTCAAATTCTCCTAGGATACTCTTGCTGGGATTTTGTGTTTTAACATAACATAGTTGGGGTGCATGTGAGAGATATAAGTCTCCTTTAGCAAAAGTAGATGCCTCAGATTGAGGGATAAAACAAAATCATCTATTATTCCTAGTCTGTGGAGACTTGTGCTTTACACGATTAGATTTTAAATTTAACACCTTTTTTTTGCACTTTCTTTTTTTGTTTAAAGGGACAACATCATATGAAAATGGTGATACGATGGTCACAGTTACTACAAGTGAGATCTCACACAAAGAAGAAGATAATCCAATTGAAAAGTCGGCGCCACTATCAGTGGTGTCTGCTGGAGCAGCGGTTAAAAAGCAAAATATTCCTGTAATCAAGACGAAACCCTTTAAGAAATCGACTAAAGGTAAAACCCGGACAAAGCTAGTTAACAAAAGGGAGAAAAGAAAAGGCAGGATACATGGTAAGAAGAAGAAAAAGCATTAGCTTGTAATCTCTATTTTGTAACTTTAGAATAGTTATTGAAGGCCTACATTTTCTTCATATTTATGCTTGCAAAAATTACCAAGGGAATCAACAAAGTTTGTGTAATGAAAATTTTTCTTTACACAATGTGGTCCATGAAGGATATTGTTGATTTGGTCGACCCATTTGGCAACCATGCCGATGACATTGAGTGGCAATTTGATGTCCGTGTTACACGACTAGGGTTTGGTTTCCCCAGCTTAGGTGGACGACTGGACGGGCATGTAGCTTACGACCTCACCGTGTAGTTGACTGCTCAAAAGGATCTGGCTGCCATTAAAGTTGGGCAACCTGTGTTTAATCTAGACTGTATTTACTTGTTTGACATCGGCGAAACTTACAGAGAACACGTATTTGTAGAAACCAATAGTCGTGAATCGTGATCGTTTTTGAACTAGGTTAAAACTAGTACATCTGATGCTATCCTTTTATCATGACAACAACAACAACAAAAACATGCAAGTAAACCAAATCC

mRNA sequence

TTTTACACAAGAATGACAATCGGGCTCTAAGGAAAGCTAGGTCTAGAAGGCCAAAAACCCAAAAGAAAAACCACAAACAAATTTCACTCCTTCCTTCCCCAGTCTCTCTCCTTCTTCTCATTCTTCTGGGAAGGTGGCAATGAAATCGGAGGCGGAAGGCGCGGTGGTGGGGAAGCCGCCGGTGAACAACTCGCAGCATATCAGCAAGAGAGCTCTTCGCAACAAATCTCTCTCCGTCTCTTTCAACGAAAAAGATTTAAGGGACTATGTAGGTGGATTCCACAAACGAAAGAAGAAGAGGAGAAAGGAAGCTCTAAAGCAGCAAGGAGAAGCAGAAAGACGCAAGCGCCTCGAGAATCGTAAGAAGATGAGGGCGGATAAAGAATTTGCACTTTATGGTGGTGCACCTCCTGAAGATGATGCTAAATCTGTTGGTGAAGATCCGGAGCAAAATGATGCAGTGGAGCTGAACCCATTGGTTTCTGGGACAACATCATATGAAAATGGTGATACGATGGTCACAGTTACTACAAGTGAGATCTCACACAAAGAAGAAGATAATCCAATTGAAAAGTCGGCGCCACTATCAGTGGTGTCTGCTGGAGCAGCGGTTAAAAAGCAAAATATTCCTGTAATCAAGACGAAACCCTTTAAGAAATCGACTAAAGGTAAAACCCGGACAAAGCTAGTTAACAAAAGGGAGAAAAGAAAAGGCAGGATACATGGATATTGTTGATTTGGTCGACCCATTTGGCAACCATGCCGATGACATTGAGTGGCAATTTGATGTCCGTGTTACACGACTAGGGTTTGGTTTCCCCAGCTTAGGTGGACGACTGGACGGGCATGTAGCTTACGACCTCACCGTGTAGTTGACTGCTCAAAAGGATCTGGCTGCCATTAAAGTTGGGCAACCTGTGTTTAATCTAGACTGTATTTACTTGTTTGACATCGGCGAAACTTACAGAGAACACGTATTTGTAGAAACCAATAGTCGTGAATCGTGATCGTTTTTGAACTAGGTTAAAACTAGTACATCTGATGCTATCCTTTTATCATGACAACAACAACAACAAAAACATGCAAGTAAACCAAATCC

Coding sequence (CDS)

ATGAAATCGGAGGCGGAAGGCGCGGTGGTGGGGAAGCCGCCGGTGAACAACTCGCAGCATATCAGCAAGAGAGCTCTTCGCAACAAATCTCTCTCCGTCTCTTTCAACGAAAAAGATTTAAGGGACTATGTAGGTGGATTCCACAAACGAAAGAAGAAGAGGAGAAAGGAAGCTCTAAAGCAGCAAGGAGAAGCAGAAAGACGCAAGCGCCTCGAGAATCGTAAGAAGATGAGGGCGGATAAAGAATTTGCACTTTATGGTGGTGCACCTCCTGAAGATGATGCTAAATCTGTTGGTGAAGATCCGGAGCAAAATGATGCAGTGGAGCTGAACCCATTGGTTTCTGGGACAACATCATATGAAAATGGTGATACGATGGTCACAGTTACTACAAGTGAGATCTCACACAAAGAAGAAGATAATCCAATTGAAAAGTCGGCGCCACTATCAGTGGTGTCTGCTGGAGCAGCGGTTAAAAAGCAAAATATTCCTGTAATCAAGACGAAACCCTTTAAGAAATCGACTAAAGGTAAAACCCGGACAAAGCTAGTTAACAAAAGGGAGAAAAGAAAAGGCAGGATACATGGATATTGTTGA

Protein sequence

MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALKQQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSYENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTRTKLVNKREKRKGRIHGYC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09367.1Spo09367.1mRNA


Homology
[Close]
BLAST of Spo09367.1 vs. NCBI nr
Match: gi|902184821|gb|KNA10375.1| (hypothetical protein SOVF_144780 [Spinacia oleracea])

HSP 1 Score: 364.8 bits (935), Expect = 9.700e-98
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1 

		  

Query: 1   MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALK 60
           MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALK
Sbjct: 1   MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALK 60

Query: 61  QQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSY 120
           QQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSY
Sbjct: 61  QQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSY 120

Query: 121 ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR 180
           ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR
Sbjct: 121 ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR 180

Query: 181 TKLVNKREKRKGRIHG 197
           TKLVNKREKRKGRIHG
Sbjct: 181 TKLVNKREKRKGRIHG 196
[Close]
BLAST of Spo09367.1 vs. NCBI nr
Match: gi|731369632|ref|XP_010696619.1| (PREDICTED: uncharacterized protein LOC104909116 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 248.8 bits (634), Expect = 7.800e-63
Identity = 141/196 (71.94%), Postives = 161/196 (82.14%), Query Frame = 1 

		  

Query: 1   MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALK 60
           M++E E   VG    +   HISKRALRNKSLSV+FNEKDLRDYVGGFHKRKKKRRKEALK
Sbjct: 1   MEAEQETMDVG----SRGNHISKRALRNKSLSVTFNEKDLRDYVGGFHKRKKKRRKEALK 60

Query: 61  QQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSY 120
           QQGEAERRKRL++RKK R +KE+ALYGGAPP +D K    D E ND +ELNP VSGTTSY
Sbjct: 61  QQGEAERRKRLDDRKKRRKEKEYALYGGAPPPEDVK----DLEPNDQMELNPSVSGTTSY 120

Query: 121 ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR 180
           ENGD  V VTTSEI+H+EE+NPIEKSAPL  VS G A KK N+PV K K FKKSTKG++R
Sbjct: 121 ENGDMKVIVTTSEIAHEEEENPIEKSAPLPAVSIGVAEKKHNLPVSKKKAFKKSTKGRSR 180

Query: 181 TKLVNKREKRKGRIHG 197
           TKLV+KRE+RKG+I+G
Sbjct: 181 TKLVSKRERRKGKING 188
[Close]
BLAST of Spo09367.1 vs. NCBI nr
Match: gi|1009109058|ref|XP_015888029.1| (PREDICTED: ribosomal RNA-processing protein 17 [Ziziphus jujuba])

HSP 1 Score: 173.3 bits (438), Expect = 4.200e-40
Identity = 106/191 (55.50%), Postives = 140/191 (73.30%), Query Frame = 1 

		  

Query: 2   KSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALKQ 61
           + E E  +VG+      +HI KRAL+NK+LSV+F+EKDLR+YV GFHKRKKKRRKEA K+
Sbjct: 4   EGEEEQPIVGQQA--RGRHIKKRALKNKALSVTFDEKDLRNYVTGFHKRKKKRRKEAQKK 63

Query: 62  QGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGED-PEQNDAVELNPLVSGTTSY 121
           Q EA+RRKR+E+RKK + ++E  +YGGAPP + + S G D PE+++  E    +SGTT+Y
Sbjct: 64  QEEAQRRKRIEDRKKRKLERELVIYGGAPPANGSASDGSDVPEEDEDGEPLASISGTTTY 123

Query: 122 ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR 181
           +NGDT VTV TSEISH+EE  P EK+   +V     AV++ N+PV K KPFK+ TK K+R
Sbjct: 124 DNGDTKVTVMTSEISHEEEIYPNEKTGTTTVPKLIGAVREHNLPV-KKKPFKRVTKHKSR 183

Query: 182 TKLVNKREKRK 192
            K  +KREKRK
Sbjct: 184 PKPQSKREKRK 191
[Close]
BLAST of Spo09367.1 vs. NCBI nr
Match: gi|848858972|ref|XP_012830399.1| (PREDICTED: ribosomal RNA-processing protein 17 [Erythranthe guttata])

HSP 1 Score: 170.6 bits (431), Expect = 2.700e-39
Identity = 101/181 (55.80%), Postives = 131/181 (72.38%), Query Frame = 1 

		  

Query: 18  SQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALKQQGEAERRKRLENRKKM 77
           + HI KRALRNK+L++SF+EKDL+DYV GFHKRKKKRRKEA++QQ EAERRKR+E RKK+
Sbjct: 18  AHHIKKRALRNKTLALSFSEKDLKDYVTGFHKRKKKRRKEAVQQQEEAERRKRIERRKKI 77

Query: 78  RADKEFALYGGAPPEDD--AKSVGEDPEQNDAVELNPLVSGTTSYENGDTMVTVTTSEIS 137
           + D++F +YGGAPPE    A  V E+ E ++ +E  P VSG   Y+NGD  VTV TSEI+
Sbjct: 78  KLDRDFVIYGGAPPEAGAVAAEVDEESEHDEDIEPAPSVSGMMKYDNGDVQVTVVTSEIA 137

Query: 138 HKEEDNPIEKS--APLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTRTKLVNKREKRKGR 195
            +EED+P++KS          G    KQNIPVIK K  KK+ K ++R K   KR+KRKG+
Sbjct: 138 -REEDDPVDKSEMGRSQTTGEGFEKSKQNIPVIKKKLLKKAPKQRSRPKQQTKRDKRKGK 197
[Close]
BLAST of Spo09367.1 vs. NCBI nr
Match: gi|645236869|ref|XP_008224943.1| (PREDICTED: ribosomal RNA-processing protein 17 [Prunus mume])

HSP 1 Score: 165.6 bits (418), Expect = 8.700e-38
Identity = 105/181 (58.01%), Postives = 124/181 (68.51%), Query Frame = 1 

		  

Query: 14  PVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALKQQGEAERRKRLEN 73
           P    +HI KRAL+NK+L+V+FNEKDL D+V GFHKRKKKRRKEA K+QGEA RRKRLE 
Sbjct: 13  PNPRGRHIKKRALKNKALAVTFNEKDLSDFVSGFHKRKKKRRKEAEKKQGEALRRKRLEL 72

Query: 74  RKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPL--VSGTTSYENGDTMVTVTT 133
           RKK R +KE AL G APP  D  +   D    D     P   VSGTT+Y+NGD  VTVTT
Sbjct: 73  RKKRRLEKELALNGDAPPATDTAADESDEYDEDDESSEPALPVSGTTTYDNGDMKVTVTT 132

Query: 134 SEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTRTKLVNKREKRK 193
           SEIS +EE +  EK+      S GA+ KK ++PV KTKP KK  K K+R KL  KR+KRK
Sbjct: 133 SEISREEESDSDEKTDAAIPQSVGAS-KKHSVPVSKTKPLKKVAKRKSRPKLQRKRDKRK 192
[Close]
BLAST of Spo09367.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSZ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_144780 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.800e-98
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1 

		  

Query: 1   MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALK 60
           MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALK
Sbjct: 1   MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALK 60

Query: 61  QQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSY 120
           QQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSY
Sbjct: 61  QQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSY 120

Query: 121 ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR 180
           ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR
Sbjct: 121 ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR 180

Query: 181 TKLVNKREKRKGRIHG 197
           TKLVNKREKRKGRIHG
Sbjct: 181 TKLVNKREKRKGRIHG 196
[Close]
BLAST of Spo09367.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6B1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g199820 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.400e-63
Identity = 141/196 (71.94%), Postives = 161/196 (82.14%), Query Frame = 1 

		  

Query: 1   MKSEAEGAVVGKPPVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALK 60
           M++E E   VG    +   HISKRALRNKSLSV+FNEKDLRDYVGGFHKRKKKRRKEALK
Sbjct: 1   MEAEQETMDVG----SRGNHISKRALRNKSLSVTFNEKDLRDYVGGFHKRKKKRRKEALK 60

Query: 61  QQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSY 120
           QQGEAERRKRL++RKK R +KE+ALYGGAPP +D K    D E ND +ELNP VSGTTSY
Sbjct: 61  QQGEAERRKRLDDRKKRRKEKEYALYGGAPPPEDVK----DLEPNDQMELNPSVSGTTSY 120

Query: 121 ENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTR 180
           ENGD  V VTTSEI+H+EE+NPIEKSAPL  VS G A KK N+PV K K FKKSTKG++R
Sbjct: 121 ENGDMKVIVTTSEIAHEEEENPIEKSAPLPAVSIGVAEKKHNLPVSKKKAFKKSTKGRSR 180

Query: 181 TKLVNKREKRKGRIHG 197
           TKLV+KRE+RKG+I+G
Sbjct: 181 TKLVSKRERRKGKING 188
[Close]
BLAST of Spo09367.1 vs. UniProtKB/TrEMBL
Match: A0A022RTT3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014056mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.900e-39
Identity = 101/181 (55.80%), Postives = 131/181 (72.38%), Query Frame = 1 

		  

Query: 18  SQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALKQQGEAERRKRLENRKKM 77
           + HI KRALRNK+L++SF+EKDL+DYV GFHKRKKKRRKEA++QQ EAERRKR+E RKK+
Sbjct: 18  AHHIKKRALRNKTLALSFSEKDLKDYVTGFHKRKKKRRKEAVQQQEEAERRKRIERRKKI 77

Query: 78  RADKEFALYGGAPPEDD--AKSVGEDPEQNDAVELNPLVSGTTSYENGDTMVTVTTSEIS 137
           + D++F +YGGAPPE    A  V E+ E ++ +E  P VSG   Y+NGD  VTV TSEI+
Sbjct: 78  KLDRDFVIYGGAPPEAGAVAAEVDEESEHDEDIEPAPSVSGMMKYDNGDVQVTVVTSEIA 137

Query: 138 HKEEDNPIEKS--APLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTRTKLVNKREKRKGR 195
            +EED+P++KS          G    KQNIPVIK K  KK+ K ++R K   KR+KRKG+
Sbjct: 138 -REEDDPVDKSEMGRSQTTGEGFEKSKQNIPVIKKKLLKKAPKQRSRPKQQTKRDKRKGK 197
[Close]
BLAST of Spo09367.1 vs. UniProtKB/TrEMBL
Match: M5X2I3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011686mg PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.900e-37
Identity = 104/181 (57.46%), Postives = 122/181 (67.40%), Query Frame = 1 

		  

Query: 14  PVNNSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALKQQGEAERRKRLEN 73
           P    +HI KRAL+NK+L+V+FNEKDL D+V GFHKRKKKRRKEA K+Q EA RRKRLE 
Sbjct: 13  PNPRGRHIKKRALKNKALAVTFNEKDLSDFVSGFHKRKKKRRKEAEKKQEEALRRKRLEL 72

Query: 74  RKKMRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPL--VSGTTSYENGDTMVTVTT 133
           RKK R +KE AL   APP  D  +   D    D     P   VSGTT+Y+NGD  VTVTT
Sbjct: 73  RKKRRLEKELALNDDAPPATDTAADESDEHDEDDESSEPALPVSGTTTYDNGDMKVTVTT 132

Query: 134 SEISHKEEDNPIEKSAPLSVVSAGAAVKKQNIPVIKTKPFKKSTKGKTRTKLVNKREKRK 193
           SEIS +EE +  EK+      S GA+ KK N+PV KTKP KK  K K+R KL  KR+KRK
Sbjct: 133 SEISREEESDSDEKTEAAIPQSVGAS-KKHNVPVSKTKPLKKVAKRKSRPKLQRKRDKRK 192
[Close]
BLAST of Spo09367.1 vs. UniProtKB/TrEMBL
Match: K4CY96_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.700e-37
Identity = 104/201 (51.74%), Postives = 143/201 (71.14%), Query Frame = 1 

		  

Query: 2   KSEAEGAVVGKPPVN---NSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEA 61
           ++EAE AV+G    N     +HI KRAL+NK+L+VSF+EKDL+D+V GFHKRKKKRRK+A
Sbjct: 3   EAEAE-AVLGDGGQNLRIRGRHIKKRALKNKALTVSFDEKDLKDFVTGFHKRKKKRRKDA 62

Query: 62  LKQQGEAERRKRLENRKKMRADKEFALYGGAPPEDDAKSVGEDPEQN----DAVELNPLV 121
             Q  +A RRKR+E RKK + ++EFA++GGA P  D+ +V ++P+++    +  E N  V
Sbjct: 63  QVQLEQALRRKRIEARKKRKEEREFAIFGGAAP--DSAAVTDEPDEDLDVEEENEPNATV 122

Query: 122 SGTTSYENGDTMVTVTTSEISHKEEDNPIEKSAPLSVVSAGAAVK--KQNIPVIKTKPFK 181
           SGTT+Y+NGD  V VTTSEIS +EE++P +   P ++V      K  KQNIPV K KPFK
Sbjct: 123 SGTTTYDNGDVQVIVTTSEISREEEESPAQVPPPSAIVKHAIESKNSKQNIPVSKKKPFK 182

Query: 182 KSTKGKTRTKLVNKREKRKGR 194
           KS K ++R K  +KR+KRKG+
Sbjct: 183 KSAKKRSRPKPQSKRDKRKGK 200
[Close]
BLAST of Spo09367.1 vs. TAIR (Arabidopsis)
Match: AT1G11240.1 (Nucleolar protein 12 (InterPro:IPR019186))

HSP 1 Score: 127.9 bits (320), Expect = 7.100e-30
Identity = 87/177 (49.15%), Postives = 116/177 (65.54%), Query Frame = 1 

		  

Query: 17  NSQHISKRALRNKSLSVSFNEKDLRDYVGGFHKRKKKRRKEALKQQGEAERRKRLENRKK 76
           +++HI KRA +NKSL+VSF+EKDL+D+V GFHKRKKKRRKEA KQQ EA RRKR+E RK 
Sbjct: 18  SARHIGKRARKNKSLTVSFDEKDLKDFVTGFHKRKKKRRKEAQKQQEEAFRRKRIEARKN 77

Query: 77  MRADKEFALYGGAPPEDDAKSVGEDPEQNDAVELNPLVSGTTSYENGDTMVTVTTSEISH 136
            + + E  + G     +D ++  E   +++  E +   S TT Y+ G+  VTVTTSEIS 
Sbjct: 78  RKLE-ELMVAGNGEDNEDGEAEDEVDAEDEEAEPDASTSATTMYDTGELKVTVTTSEIS- 137

Query: 137 KEEDNPIEKSAPLSVVSAGA--AVKKQNIPVIKTKPFKKSTKGKTRTKLVNKREKRK 192
           +EE+ PI K    S  S     A  KQ +PV KTKP K+S +  T TK + KR+K+K
Sbjct: 138 REEEEPIRKEKTQSTESGSTAKASTKQPVPVRKTKPMKQSRRRST-TKTMKKRDKKK 191
The following BLAST results are available for this feature:
BLAST of Spo09367.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902184821|gb|KNA10375.1|9.7e-98100.hypothetical protein SOVF_1447... [more]
gi|731369632|ref|XP_010696619.1|7.8e-6371.9PREDICTED: uncharacterized pro... [more]
gi|1009109058|ref|XP_015888029.1|4.2e-4055.5PREDICTED: ribosomal RNA-proce... [more]
gi|848858972|ref|XP_012830399.1|2.7e-3955.8PREDICTED: ribosomal RNA-proce... [more]
gi|645236869|ref|XP_008224943.1|8.7e-3858.0PREDICTED: ribosomal RNA-proce... [more]
back to top
BLAST of Spo09367.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSZ7_SPIOL6.8e-98100.Uncharacterized protein OS=Spi... [more]
A0A0J8B6B1_BETVU5.4e-6371.9Uncharacterized protein OS=Bet... [more]
A0A022RTT3_ERYGU1.9e-3955.8Uncharacterized protein OS=Ery... [more]
M5X2I3_PRUPE3.9e-3757.4Uncharacterized protein OS=Pru... [more]
K4CY96_SOLLC8.7e-3751.7Uncharacterized protein OS=Sol... [more]
back to top
BLAST of Spo09367.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo09367.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G11240.17.1e-3049.1Nucleolar protein 12 (InterPro... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019186Nucleolar protein 12PANTHERPTHR14577UNCHARACTERIZEDcoord: 1..194
score: 7.6
IPR019186Nucleolar protein 12PFAMPF09805Nop25coord: 23..85
score: 3.9
NoneNo IPR availableunknownCoilCoilcoord: 49..69
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007059 chromosome segregation
biological_process GO:0016310 phosphorylation
biological_process GO:0006259 DNA metabolic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006769 nicotinamide metabolic process
biological_process GO:0046497 nicotinate nucleotide metabolic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:0061025 membrane fusion
biological_process GO:0007031 peroxisome organization
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0007127 meiosis I
biological_process GO:0008152 metabolic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0046838 phosphorylated carbohydrate dephosphorylation
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0005983 starch catabolic process
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0005773 vacuole
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005778 peroxisomal membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0044446 intracellular organelle part
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
molecular_function GO:0005525 GTP binding
molecular_function GO:0019003 GDP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0003951 NAD+ kinase activity
molecular_function GO:0004143 diacylglycerol kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0050308 sugar-phosphatase activity
molecular_function GO:2001070 starch binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0046983 protein dimerization activity
RNA-Seq Expression