Spo09413 (gene)

Overview
NameSpo09413
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A2 (1.97.1.12) (PSI-B) (PsaB)
LocationSpoScf_67327 : 8 .. 575 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGTTGGTTACACCTACAACCAAAATGGAAACCGAGCGTTTCGTGGTTCAAAAATGCCGAATCCCGTCTCAACCATCACTTGTCAGGACTCTTTGAGTAAGTTCCTTGGCTTGGACAGGACATTTAGTTCATGTCGCTATTCCCGGATCCAGAGGAGAGTACGTTCGATGGAATAATTTCTTAGACGTATTACCACATCCTCAAGGATTAGGTCCCCTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAGCAGTCATTTATTTGGTACCTCCCAAGGGGCGGGAACTGCCATTCTAACCCTTCTTGGGGGATTTCATCCACAAACGCAAAGTTTATGGCTAACTGATATGGCTCATCATCATTTAGCTATTGCATTTGTTTTTCTTGTTGCGGGTCATATGTATAGAACGAACTTTGGGATTGGGCACAGTATGAAAGATCTTTTAGAAGCGCATATTCCCCCAGGGGGACGATTGGGACGCGGACATAAAGGTCTTTATGACACAATCAACAATTCGCTTCATTTTCAATTAGGACTTGCCCTAGCGTCTTTA

mRNA sequence

GGGGTTGGTTACACCTACAACCAAAATGGAAACCGAGCGTTTCGTGGTTCAAAAATGCCGAATCCCGTCTCAACCATCACTTGTCAGGACTCTTTGAGACATTTAGTTCATGTCGCTATTCCCGGATCCAGAGGAGAGTACGTTCGATGGAATAATTTCTTAGACGTATTACCACATCCTCAAGGATTAGGTCCCCTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAGCAGTCATTTATTTGGTACCTCCCAAGGGGCGGGAACTGCCATTCTAACCCTTCTTGGGGGATTTCATCCACAAACGCAAAGTTTATGGCTAACTGATATGGCTCATCATCATTTAGCTATTGCATTTGTTTTTCTTGTTGCGGGTCATATGTATAGAACGAACTTTGGGATTGGGCACAGTATGAAAGATCTTTTAGAAGCGCATATTCCCCCAGGGGGACGATTGGGACGCGGACATAAAGGTCTTTATGACACAATCAACAATTCGCTTCATTTTCAATTAGGACTTGCCCTAGCGTCTTTA

Coding sequence (CDS)

GGGGTTGGTTACACCTACAACCAAAATGGAAACCGAGCGTTTCGTGGTTCAAAAATGCCGAATCCCGTCTCAACCATCACTTGTCAGGACTCTTTGAGACATTTAGTTCATGTCGCTATTCCCGGATCCAGAGGAGAGTACGTTCGATGGAATAATTTCTTAGACGTATTACCACATCCTCAAGGATTAGGTCCCCTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAGCAGTCATTTATTTGGTACCTCCCAAGGGGCGGGAACTGCCATTCTAACCCTTCTTGGGGGATTTCATCCACAAACGCAAAGTTTATGGCTAACTGATATGGCTCATCATCATTTAGCTATTGCATTTGTTTTTCTTGTTGCGGGTCATATGTATAGAACGAACTTTGGGATTGGGCACAGTATGAAAGATCTTTTAGAAGCGCATATTCCCCCAGGGGGACGATTGGGACGCGGACATAAAGGTCTTTATGACACAATCAACAATTCGCTTCATTTTCAATTAGGACTTGCCCTAGCGTCTTTA

Protein sequence

GVGYTYNQNGNRAFRGSKMPNPVSTITCQDSLRHLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGTAILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09413.1Spo09413.1mRNA


Homology
[Close]
BLAST of Spo09413.1 vs. NCBI nr
Match: gi|11497524|ref|NP_054932.1| (photosystem I P700 chlorophyll a apoprotein A2 [Spinacia oleracea])

HSP 1 Score: 320.1 bits (819), Expect = 2.500e-84
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNSLHFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSLHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. NCBI nr
Match: gi|149390267|ref|YP_001294097.1| (photosystem I P700 apoprotein A2 [Chloranthus spicatus])

HSP 1 Score: 318.9 bits (816), Expect = 5.600e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. NCBI nr
Match: gi|953515698|gb|ALO71261.1| (photosystem I P700 chlorophyll a apoprotein A2 (chloroplast) [Ampelopsis glandulosa var. brevipedunculata])

HSP 1 Score: 318.9 bits (816), Expect = 5.600e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. NCBI nr
Match: gi|918020403|ref|YP_009162876.1| (photosystem I P700 chlorophyll a apoprotein A2 (chloroplast) [Rheum palmatum])

HSP 1 Score: 318.9 bits (816), Expect = 5.600e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. NCBI nr
Match: gi|569533424|gb|AHE41516.1| (photosystem I P700 apoprotein A2 (chloroplast) [Ribes fasciculatum var. chinense])

HSP 1 Score: 318.9 bits (816), Expect = 5.600e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. UniProtKB/TrEMBL
Match: M9UW64_9MAGN (Photosystem I P700 chlorophyll a apoprotein A2 OS=Tetracentron sinense GN=psaB PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.900e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. UniProtKB/TrEMBL
Match: V9ZA23_9MAGN (Photosystem I P700 chlorophyll a apoprotein A2 OS=Ribes fasciculatum var. chinense GN=psaB PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.900e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. UniProtKB/TrEMBL
Match: A0A0U2EZH7_RHEPA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Rheum palmatum GN=psaB PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.900e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. UniProtKB/TrEMBL
Match: A0A0S2M9B0_AMPGB (Photosystem I P700 chlorophyll a apoprotein A2 OS=Ampelopsis glandulosa var. brevipedunculata GN=psaB PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.900e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. UniProtKB/TrEMBL
Match: A0A0C5BK13_CHLJA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Chloranthus japonicus GN=psaB PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.900e-84
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. ExPASy Swiss-Prot
Match: PSAB_SPIOL (Photosystem I P700 chlorophyll a apoprotein A2 OS=Spinacia oleracea GN=psaB PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 1.600e-86
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNSLHFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSLHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. ExPASy Swiss-Prot
Match: PSAB_CHLSC (Photosystem I P700 chlorophyll a apoprotein A2 OS=Chloranthus spicatus GN=psaB PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.500e-86
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. ExPASy Swiss-Prot
Match: PSAB_NANDO (Photosystem I P700 chlorophyll a apoprotein A2 OS=Nandina domestica GN=psaB PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.000e-85
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDS SHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSGSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. ExPASy Swiss-Prot
Match: PSAB_VITVI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera GN=psaB PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.000e-85
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTD+AHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. ExPASy Swiss-Prot
Match: PSAB_BUXMI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Buxus microphylla GN=psaB PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.000e-85
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT
Sbjct: 193 HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTD+AHHHLAIAF+FLVAGHMYRTNFGIGHSMKDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. TAIR (Arabidopsis)
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 308.5 bits (789), Expect = 2.700e-84
Identity = 141/149 (94.63%), Postives = 147/149 (98.66%), Query Frame = 1 

		  

Query: 34  HLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGT 93
           HLVHVAIP SRGEYVRWNNFL+VLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQG+GT
Sbjct: 193 HLVHVAIPASRGEYVRWNNFLNVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGSGT 252

Query: 94  AILTLLGGFHPQTQSLWLTDMAHHHLAIAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPG 153
           AILTLLGGFHPQTQSLWLTDMAHHHLAIA +FL+AGHMYRTNFGIGHS+KDLLEAHIPPG
Sbjct: 253 AILTLLGGFHPQTQSLWLTDMAHHHLAIAILFLIAGHMYRTNFGIGHSIKDLLEAHIPPG 312

Query: 154 GRLGRGHKGLYDTINNSLHFQLGLALASL 183
           GRLGRGHKGLYDTINNS+HFQLGLALASL
Sbjct: 313 GRLGRGHKGLYDTINNSIHFQLGLALASL 341
[Close]
BLAST of Spo09413.1 vs. TAIR (Arabidopsis)
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 119.0 bits (297), Expect = 3.000e-27
Identity = 61/122 (50.00%), Postives = 74/122 (60.66%), Query Frame = 1 

		  

Query: 61  QGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGTAILTLLGGFHPQTQSLWLTDMAHHHLA 120
           +G  P FT  W+ Y++                   LT  GG  P T  LWLTD+AHHHLA
Sbjct: 256 EGATPFFTLNWSKYSE------------------FLTFRGGLDPVTGGLWLTDIAHHHLA 315

Query: 121 IAFVFLVAGHMYRTNFGIGHSMKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALA 180
           IA +FL+AGHMYRTN+GIGH +KD+LEAH   G   G+GHKGLY+ +  S H QL L LA
Sbjct: 316 IAILFLIAGHMYRTNWGIGHGIKDILEAH--KGPFTGQGHKGLYEILTTSWHAQLSLNLA 357

Query: 181 SL 183
            L
Sbjct: 376 ML 357
The following BLAST results are available for this feature:
BLAST of Spo09413.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|11497524|ref|NP_054932.1|2.5e-84100.photosystem I P700 chlorophyll... [more]
gi|149390267|ref|YP_001294097.1|5.6e-8498.6photosystem I P700 apoprotein ... [more]
gi|953515698|gb|ALO71261.1|5.6e-8498.6photosystem I P700 chlorophyll... [more]
gi|918020403|ref|YP_009162876.1|5.6e-8498.6photosystem I P700 chlorophyll... [more]
gi|569533424|gb|AHE41516.1|5.6e-8498.6photosystem I P700 apoprotein ... [more]
back to top
BLAST of Spo09413.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
M9UW64_9MAGN3.9e-8498.6Photosystem I P700 chlorophyll... [more]
V9ZA23_9MAGN3.9e-8498.6Photosystem I P700 chlorophyll... [more]
A0A0U2EZH7_RHEPA3.9e-8498.6Photosystem I P700 chlorophyll... [more]
A0A0S2M9B0_AMPGB3.9e-8498.6Photosystem I P700 chlorophyll... [more]
A0A0C5BK13_CHLJA3.9e-8498.6Photosystem I P700 chlorophyll... [more]
back to top
BLAST of Spo09413.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PSAB_SPIOL1.6e-86100.Photosystem I P700 chlorophyll... [more]
PSAB_CHLSC3.5e-8698.6Photosystem I P700 chlorophyll... [more]
PSAB_NANDO1.0e-8597.9Photosystem I P700 chlorophyll... [more]
PSAB_VITVI1.0e-8597.9Photosystem I P700 chlorophyll... [more]
PSAB_BUXMI1.0e-8597.9Photosystem I P700 chlorophyll... [more]
back to top
BLAST of Spo09413.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
ATCG00340.12.7e-8494.6Photosystem I, PsaA/PsaB prote... [more]
ATCG00350.13.0e-2750.0Photosystem I, PsaA/PsaB prote... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBPRINTSPR00257PHOTSYSPSAABcoord: 171..182
score: 5.3E-12coord: 114..132
score: 5.3
IPR001280Photosystem I PsaA/PsaBGENE3D1.20.1130.10coord: 34..182
score: 1.1
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 34..182
score: 5.9
IPR001280Photosystem I PsaA/PsaBunknownSSF81558Photosystem I subunits PsaA/PsaBcoord: 34..181
score: 1.11
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 34..182
score: 2.5
NoneNo IPR availablePANTHERPTHR30128:SF4PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2coord: 34..182
score: 2.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0008152 metabolic process
biological_process GO:0051301 cell division
biological_process GO:0015979 photosynthesis
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0018298 protein-chromophore linkage
cellular_component GO:0009579 thylakoid
cellular_component GO:0005739 mitochondrion
cellular_component GO:0030076 light-harvesting complex
cellular_component GO:0005840 ribosome
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0009523 photosystem II
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0009055 electron transfer activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo250040.99Barchart | Table
Spo084400.99Barchart | Table
Spo261270.98Barchart | Table
Spo255370.96Barchart | Table
Spo062010.91Barchart | Table
Spo255550.91Barchart | Table
Spo042770.91Barchart | Table
Spo028510.91Barchart | Table
Spo058750.90Barchart | Table
Spo247070.87Barchart | Table
Spo255380.87Barchart | Table
Spo179230.85Barchart | Table
Spo164900.83Barchart | Table
Spo062000.83Barchart | Table
Spo139590.82Barchart | Table
Spo247080.82Barchart | Table
Spo119040.81Barchart | Table
Spo006260.80Barchart | Table
Spo164850.79Barchart | Table
Spo042780.79Barchart | Table
Spo054120.79Barchart | Table
Spo179240.78Barchart | Table
Spo141040.78Barchart | Table
Spo170100.78Barchart | Table
Spo195610.77Barchart | Table
Spo261260.77Barchart | Table
Spo180440.76Barchart | Table
Spo172510.76Barchart | Table
Spo106270.75Barchart | Table
Spo247180.75Barchart | Table
Spo017480.75Barchart | Table
Spo195600.74Barchart | Table
Spo164840.74Barchart | Table
Spo148150.74Barchart | Table
Spo164860.73Barchart | Table
Spo179250.71Barchart | Table
Spo148160.71Barchart | Table
Spo247190.70Barchart | Table
Spo190640.70Barchart | Table
Spo247170.70Barchart | Table
Spo136500.69Barchart | Table
Spo052840.68Barchart | Table
Spo123620.68Barchart | Table
Spo152030.68Barchart | Table
Spo219460.68Barchart | Table
Spo118710.67Barchart | Table
Spo224450.67Barchart | Table
Spo300360.66Barchart | Table
Spo096750.66Barchart | Table
Spo179320.65Barchart | Table
Spo225720.65Barchart | Table
Spo047880.65Barchart | Table
Spo148050.65Barchart | Table