Spo09414 (gene) | SpinachBase

Overview


Name	Spo09414
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Mitochondrial import inner membrane translocase subunit tim9
Location	chr5 : 24591719 .. 24596676 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAATTCTAACGTCAACCGGTTAAAAATTTCGTGCAGAGAATCAAACGGCTGATTACTTTTTAGGGTTTAAGGTGGTGAAACAAACACCGAAACAAAGCGAACAACACAACAGAGGTTTTCGGCGAAAGGCAGAGAAAGAGAGGTTTTTGAGATTTATTTACTTGTGGGCGATACTGAAAAAATGGACAAGAACATGCTCGGAGACCTCGACAATCTTCCTGAAGAAGATAAGATGAAAATGGCCGCCATGATCGACCAGCTCCAGATTCGCGACAGGTTCTCTTCCTTCTCTTCCTTACTTCACTGGATATTTCATGACCTCGAAACAAGTCATCTGTTGCATCGAAGCATGTATGATGTGTTGTTGCATTTTTGTTTGCAATTGTTTTTGCTTGCTTGTAGATTTTTAATGTAGTTTGGAAATTGAATTTTTAGTATCCGGTAAATCTGATTTTTATTTGCGGTCTGTGTTCTTCATAAATGGTAGATATTTTATTGGGAAGTTTGTTTTTGAGGTAGTCATGCTTTTAGTTTGAAGATTTTGAGGATGTGAATTGTTGTGAATCTTGTATTTTGGAATAATGGTTTCTCAGCTTTGGGATGCAGAATTAAGCTGGACAATAAATAGTAAATTTGGTGTCGAATTGACTGATGATGAAGTCGAGGATTCCTATGATCACATATCTGATTACTAATGATTTGAAACCATTGGAGCTTATCACCTTTGAATATAAGTTGTAACCAGAAGTTTGCTGACTTGTGGTAGTCTATACATTATTAACATGGTTACATGAGCTGTTCTTCGTGTGAGGTTGATACTAGTAGGTAGAAGGAAATGACTCCGGTGACGTGGCTTTATTTTTTAATTAAAAATAAGGGTCTGTTGTGCCCATATTACAGGAAGCGCAAAAGCACAGAAGCGCTAGGAAGCGCAAAAGCACAGAAGCGCTGTATGTCGCTAGGCTTCGGCTGGCAGAAGCGTTCTTCTGTGAGCTTTTGAGCTTCTGGGGCTTTAAGCGCGCTTAAGTGCGCTTTTTAAAACTACGATCGAAACATGAATTAAAGATGGTAAACATATAGTTTTTTTCAATCCTAATGCTTCGACTATTGGTTAATGATTCTCTCTACCCCAAAAGATTTGTGGACTTGCACTCTGCACAGGAGTTACCGGAGCCCTTTGATTAGATATCCCTCTATGATCTATCCCTTCCCTATGATTCTGAGTTGTCATTTTTCTTTTTATCCAAACCAACATCACCCTGGAATGTATTTCTGGTTTGCATGTTCTGAAATATAATTTGTAGGGGGATAGGGGAAGGGGCTGGGAAATGGTAGGCTAAGTGATATTGGGTTCATTTTAGATTGGTGAATTTGAGGGTCAAGTTGGAATGTTTTCAGTTGACGGTCAGTTAAATATTTTTAGTCAGTCTATGGAGTTGATGAAATAAACTTGATACCTAAAAGTTTGATTCAACTGTTTGGTTGAGGTCATTTGGTGTGAACCTCATTCACTCAGGTATCAAGTGATTCAAGCCCCTTTCCTACCAACTCCTTGAACCTCATACCCAGGACTTGCGGTATCAGATAACTCACCCTCGTCTCTCTGTCTCTGTGGTTCTATGTATCCACAACCCTATGCTGCTGCATCTCGCCTTCTCCACGGATCACCTCCATCCCTTCATTTGCTTCCGTTTCTTTGCCAAAGGATTTTGAAGATTATCCTTCTTTTTTTGGGGGTGGGGGTGGGGGGGGGGGGTTACNGGGGGGGGGGGGGGGGGGGGGGTTAAAGAGGGAATTGCTTTACAGCGTAGGAAGGCCTACTTTGGAATACATGGCAGCCAAACAACACATATAATCATATAATGGCTTCCAGTCCAGTACACTTAGTTATAAGGTTCTCCACCAAACAAGTATGAAGTATAATTAAGTAATGGAATTCCAATCCATACTCCAACTTTCTGATTTTGAAACCATTCTATTCCATTTTGTTAAAACAAAAACAGCTTCTCTTTGCTAATGCAAGATAAATATTGAAAGTTAATTAAAGCATTAAGATTTTATACAAAATTTACTACTTCCTCAGTTCCTTAAATATCGCACCATTTTGATTTTTACACTATACAAACTACGACTTTGGCCGCCTTTTGTGATTCATACGTAAGAAAATTTGTAATCATGGAAGATCACGTTAGAATCGTACCGATACATTTTTTCTAAATATCAATGTTTATAATTTTTACTCATACGTAGTTTGAGATATTAAGAGTCAAATTAGTGCGTTGGAGGAGTATAAGTCAACCATGGTGCAATATTTAAGGAACGGAGGAAGTATATAACATTTTAAAATGATATTGATCACAACTAGTAGAACATACATAAATCTGTCGTCAGGTCACCTTTTGAATGCAAAATGCTCCTAACCTAAGTAAACTGTTTTCATTTAACTCCAGATGTCAAAAATGACCTAAGCATGAGTACCTCACTTGCCCCAAGAATACAAAGTTGTTTTGTTTTGGCTTTTTTTTGGGTTGTGTAGACAAATGTTGTAGGTTTTATTCTCAAGCTGGTCACTGCATGAAATGTCTTAATAAAGTAGTTACAATCAAGTATTTTGAGTGGTAAAAAACTAAGAATCAATGAGATTTCTGTGTATCCTGAAATGCATCGAAGGATCTTTTTTATAATTTTTTAATGGAATGTTCCATAGATTTTGAGAATCTCTATGGACGCCACAGGATGAGAAACTTAGAAAGTCCTCTGTTTAAAAAGTGCAATATTTTATTTTTCATGTGCAAGACACCTTTGGGAAATATTGTTAACTAAATACTCCTTTATCCCACAATAATTTGCATTTCCTTTCAGTGAACTGAATTTTATTACTTCTCTCTCTCTATCCACTATCGGTCTCTCACTCAGTACATTCCAACACTTTCTCTCCTAATCTCTATATCAAATATAACAACAGTTCTAAATTTCGCTGCCAAAAAAACATGCTATTTGTGATACCGAGGGAGTATTGATGGAAACTGTTAAAAGTTAGTCCACATGATAATGTTCTTTTCTTTTACATTAGCAAAAAACACGGCCAAGGTTGATGATACTTTCATTTTGAAAAAGTTAATGTCTCTAATAATTTGGAATCGAGGTAGTACAATTTCTGCAAAAGTGGGTACTGAGGAAGTTTGAAGCAATTTAATTAGTTAAGATAAATTTGTAGGCTTGTAGGATTATTTTTCCTTCTATTTCCAGTAAATTAACAAAAAAGTTACTGGAGACAGCAGATGATTGATATAGCTAGAAAATATGACGTTAAAAGTATCAGCATAAGATGAGAGGTCTCCAATCTGTCATTCGAGGTCCTTTAAATACCAAGGCTCCAAAGCTATATTCATTATTGAGGTTTTTATCTGCTAGAGGTTTTTTGAGCCTTATATTGGTTGTTTATTTATCTCCTCTTTTCATTTAAAGAAATTGTAATATGAAGTATGTGATTGAGTTATTTATGTTTTTAACGACATGTGTATGATTTTGCGCATAAATGACTAGAATGTATTTTTCAATTGGAAGTATGCATGACAAAATGCCTTTTGATGTGCTGTACCTATTTCACATCCCCTACGTTGTTAGAATTTTAGGATTACAAAACAAGTTGGTGATCCCTGTACTGTTGAACTGGTTTACAAAAGTGTGATTTAATTTCTTTGAATTTTTATTTGTTTTCACCGAAATTCTCTCAGAATATTTGCACTGTGCCTAAGTTTTTTTTTTTGTTTTTGCTTTTGATGGTTAAATGATAAATTGACCAATATTGTGAAATTGAATTTCAGTCTAAGGATGTACAATTCTCTGGTGGAGAGATGTTTCACCGACTGTGTTGACTCCTTCAGACGGAAAACTCTTGACAAGCAGGAGGAGACATGTGTGCGACGGTGTGCTGAGAAATTCCTGAAGCACTCAATGCGTGTGGGTCTGAGATTTGCAGAGCTTAACCAGGGCGCTCCTACCCAGGATTGAGCATGATCGATCGTTTTGCATAACCGAATGCTAAGTCCAAAGCCATTTAAATCTTTTAGTATCTTTCAGTATTATCAGTGGGGAATTTAGCCTTTGTTGGACCTCTGATAAGCTGGGTTAGTCCTCTAATACAATTTTGGGGTATTTCCATACTGATGATAGGCTGACTTGATTTGGAAACTGTGGTTACAGCTGAATTTTTAAGCTTTGTAGGGCTGAAAATATGTGCCCAAACTTCTTTATATCTCCTTCTGTATTCAATGGTAATTCCCTGGGATTTCCTCAAATTGTTTTTAAGAAAATGTAGGTCCTGAATTTGATCTTACAGTGGTTGTTATTGTTGCCCCTAGTCTGTTTTTGCCCCTATGAGTCTACAACCGCATTTTCTGCTTATTCTCCTCTGATATAGGCGTAATTAGTAGCTTAATGTAAACATAGAGCAGAATCAATAAAGGAAAAGGAAAAGGAAAAGGAAATTCATATTCCCAAATCGCTTTGTGTCTGTTTGGCTTGCTGTTCAATTTCCCACTTTCCTTTTTGGAATTCTCCATATTCCCTCTACACCAAGTCATTTATCTTACTTCGGACTTTCCTCATTTCCATCTTCCATCCTTGCTCACACCACGTGCCCAACTGCCTACCTAACTGTCTGCTAGCAACAACCCACCGCTCAGTTCAAGCTAGCAACCGATTACAATTAACCTTTGCCGTAGGCAAGCTAATCCAGTTGCAGATTGGCTAGCAAAATATGGTGTTGGGTTATCTCCAAATATGGTCTTACTTGGGCGAACCCGAGGGATATTCGTGTTGTTTTATTGGAGGACTTAAGTGGGGTGACGTTGGCTAGGACGATTCCTGCAGGGACAACCTAGGTATCGACTATTCTGCCGTGACGGTTCTTCGTGATTCTACTCGGTATCAGTTTGCAGACATTTCACAC

mRNA sequence

AAATAAATTCTAACGTCAACCGGTTAAAAATTTCGTGCAGAGAATCAAACGGCTGATTACTTTTTAGGGTTTAAGGTGGTGAAACAAACACCGAAACAAAGCGAACAACACAACAGAGGTTTTCGGCGAAAGGCAGAGAAAGAGAGGTTTTTGAGATTTATTTACTTGTGGGCGATACTGAAAAAATGGACAAGAACATGCTCGGAGACCTCGACAATCTTCCTGAAGAAGATAAGATGAAAATGGCCGCCATGATCGACCAGCTCCAGATTCGCGACAGTCTAAGGATGTACAATTCTCTGGTGGAGAGATGTTTCACCGACTGTGTTGACTCCTTCAGACGGAAAACTCTTGACAAGCAGGAGGAGACATGTGTGCGACGGTGTGCTGAGAAATTCCTGAAGCACTCAATGCGTGTGGGTCTGAGATTTGCAGAGCTTAACCAGGGCGCTCCTACCCAGGATTGAGCATGATCGATCGTTTTGCATAACCGAATGCTAAGTCCAAAGCCATTTAAATCTTTTAGTATCTTTCAGTATTATCAGTGGGGAATTTAGCCTTTGTTGGACCTCTGATAAGCTGGGTTAGTCCTCTAATACAATTTTGGGGTATTTCCATACTGATGATAGGCTGACTTGATTTGGAAACTGTGGTTACAGCTGAATTTTTAAGCTTTGTAGGGCTGAAAATATGTGCCCAAACTTCTTTATATCTCCTTCTGTATTCAATGGTAATTCCCTGGGATTTCCTCAAATTGTTTTTAAGAAAATGTAGGTCCTGAATTTGATCTTACAGTGGTTGTTATTGTTGCCCCTAGTCTGTTTTTGCCCCTATGAGTCTACAACCGCATTTTCTGCTTATTCTCCTCTGATATAGGCGTAATTAGTAGCTTAATGTAAACATAGAGCAGAATCAATAAAGGAAAAGGAAAAGGAAAAGGAAATTCATATTCCCAAATCGCTTTGTGTCTGTTTGGCTTGCTGTTCAATTTCCCACTTTCCTTTTTGGAATTCTCCATATTCCCTCTACACCAAGTCATTTATCTTACTTCGGACTTTCCTCATTTCCATCTTCCATCCTTGCTCACACCACGTGCCCAACTGCCTACCTAACTGTCTGCTAGCAACAACCCACCGCTCAGTTCAAGCTAGCAACCGATTACAATTAACCTTTGCCGTAGGCAAGCTAATCCAGTTGCAGATTGGCTAGCAAAATATGGTGTTGGGTTATCTCCAAATATGGTCTTACTTGGGCGAACCCGAGGGATATTCGTGTTGTTTTATTGGAGGACTTAAGTGGGGTGACGTTGGCTAGGACGATTCCTGCAGGGACAACCTAGGTATCGACTATTCTGCCGTGACGGTTCTTCGTGATTCTACTCGGTATCAGTTTGCAGACATTTCACAC

Coding sequence (CDS)

ATGGACAAGAACATGCTCGGAGACCTCGACAATCTTCCTGAAGAAGATAAGATGAAAATGGCCGCCATGATCGACCAGCTCCAGATTCGCGACAGTCTAAGGATGTACAATTCTCTGGTGGAGAGATGTTTCACCGACTGTGTTGACTCCTTCAGACGGAAAACTCTTGACAAGCAGGAGGAGACATGTGTGCGACGGTGTGCTGAGAAATTCCTGAAGCACTCAATGCGTGTGGGTCTGAGATTTGCAGAGCTTAACCAGGGCGCTCCTACCCAGGATTGA

Protein sequence

MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQEETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo09414.1	Spo09414.1	mRNA

Homology

[Close]

BLAST of Spo09414.1 vs. NCBI nr
Match: gi|902160928|gb|KNA06494.1| (hypothetical protein SOVF_180190 [Spinacia oleracea])

HSP 1 Score: 189.9 bits (481), Expect = 2.000e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE
Sbjct: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 93

[Close]

BLAST of Spo09414.1 vs. NCBI nr
Match: gi|731334059|ref|XP_010678046.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim9 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 186.4 bits (472), Expect = 2.200e-44
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE
Sbjct: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCV+RCAEKFLKHSMRVGLRFAELNQGAPT D
Sbjct: 61 ETCVKRCAEKFLKHSMRVGLRFAELNQGAPTPD 93

[Close]

BLAST of Spo09414.1 vs. NCBI nr
Match: gi|12230182|sp|Q9XGX8.1|TIM9_MESCR (RecName: Full=Mitochondrial import inner membrane translocase subunit Tim9)

HSP 1 Score: 178.3 bits (451), Expect = 6.100e-42
Identity = 86/93 (92.47%), Postives = 91/93 (97.85%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDKNMLGDLDNLPEEDK+KMA+MI+QLQIRDSLRMYN+LVERCFTDCVDSFRRKTLDKQE
Sbjct: 1  MDKNMLGDLDNLPEEDKLKMASMIEQLQIRDSLRMYNNLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCV+RCAEKFLKHSMRVGLRFAELNQGA T D
Sbjct: 61 ETCVKRCAEKFLKHSMRVGLRFAELNQGAATTD 93

[Close]

BLAST of Spo09414.1 vs. NCBI nr
Match: gi|848911139|ref|XP_012854051.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim9-like [Erythranthe guttata])

HSP 1 Score: 177.6 bits (449), Expect = 1.000e-41
Identity = 84/93 (90.32%), Postives = 92/93 (98.92%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDK+MLGDLD+LPEEDK++M+AMIDQLQ+RDSLRMYNSLVERCFTDCV+SFRRKTLDKQE
Sbjct: 1  MDKSMLGDLDSLPEEDKLRMSAMIDQLQVRDSLRMYNSLVERCFTDCVESFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCVRRCAEKFLKHSMRVG+RFAELNQGAPT D
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAPTPD 93

[Close]

BLAST of Spo09414.1 vs. NCBI nr
Match: gi|527204485|gb|EPS70642.1| (hypothetical protein M569_04120 [Genlisea aurea])

HSP 1 Score: 177.2 bits (448), Expect = 1.400e-41
Identity = 84/93 (90.32%), Postives = 92/93 (98.92%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDK+MLGDLD+L EEDK++M+AMIDQLQIRDSLRMYN+LVERCFTDCVDSFRRKTLDKQE
Sbjct: 1  MDKSMLGDLDSLAEEDKLRMSAMIDQLQIRDSLRMYNTLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETC+RRCAEKFLKHSMRVG+RFAELNQGAPTQD
Sbjct: 61 ETCIRRCAEKFLKHSMRVGMRFAELNQGAPTQD 93

[Close]

BLAST of Spo09414.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGR1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180190 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.400e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE
Sbjct: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 93

[Close]

BLAST of Spo09414.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CG74_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g111190 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.600e-44
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE
Sbjct: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCV+RCAEKFLKHSMRVGLRFAELNQGAPT D
Sbjct: 61 ETCVKRCAEKFLKHSMRVGLRFAELNQGAPTPD 93

[Close]

BLAST of Spo09414.1 vs. UniProtKB/TrEMBL
Match: A0A022Q8Q6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017113mg PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.200e-42
Identity = 84/93 (90.32%), Postives = 92/93 (98.92%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDK+MLGDLD+LPEEDK++M+AMIDQLQ+RDSLRMYNSLVERCFTDCV+SFRRKTLDKQE
Sbjct: 1  MDKSMLGDLDSLPEEDKLRMSAMIDQLQVRDSLRMYNSLVERCFTDCVESFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCVRRCAEKFLKHSMRVG+RFAELNQGAPT D
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAPTPD 93

[Close]

BLAST of Spo09414.1 vs. UniProtKB/TrEMBL
Match: S8EDL1_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_04120 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.400e-42
Identity = 84/93 (90.32%), Postives = 92/93 (98.92%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDK+MLGDLD+L EEDK++M+AMIDQLQIRDSLRMYN+LVERCFTDCVDSFRRKTLDKQE
Sbjct: 1  MDKSMLGDLDSLAEEDKLRMSAMIDQLQIRDSLRMYNTLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETC+RRCAEKFLKHSMRVG+RFAELNQGAPTQD
Sbjct: 61 ETCIRRCAEKFLKHSMRVGMRFAELNQGAPTQD 93

[Close]

BLAST of Spo09414.1 vs. UniProtKB/TrEMBL
Match: M1BNQ0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019201 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.600e-41
Identity = 83/93 (89.25%), Postives = 91/93 (97.85%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDK+M+GDLD+LPE DK++MAAMI+QLQ+RDSLRMYNSLVERCFTDCVDSF+RKTLDKQE
Sbjct: 1  MDKSMIGDLDSLPEADKLRMAAMIEQLQVRDSLRMYNSLVERCFTDCVDSFKRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCVRRCAEKFLKHSMRVGLRFAELNQGAPT D
Sbjct: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTPD 93

[Close]

BLAST of Spo09414.1 vs. ExPASy Swiss-Prot
Match: TIM9_MESCR (Mitochondrial import inner membrane translocase subunit Tim9 OS=Mesembryanthemum crystallinum GN=TIM9 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.800e-44
Identity = 86/93 (92.47%), Postives = 91/93 (97.85%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDKNMLGDLDNLPEEDK+KMA+MI+QLQIRDSLRMYN+LVERCFTDCVDSFRRKTLDKQE
Sbjct: 1  MDKNMLGDLDNLPEEDKLKMASMIEQLQIRDSLRMYNNLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCV+RCAEKFLKHSMRVGLRFAELNQGA T D
Sbjct: 61 ETCVKRCAEKFLKHSMRVGLRFAELNQGAATTD 93

[Close]

BLAST of Spo09414.1 vs. ExPASy Swiss-Prot
Match: TIM9_ORYSJ (Mitochondrial import inner membrane translocase subunit Tim9 OS=Oryza sativa subsp. japonica GN=TIM9 PE=3 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 9.400e-43
Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MDK+MLGDLD LPEEDKM+MAAM+DQLQIRDSLRMYNSLVERCFTDCVD+FRRKTLDKQE
Sbjct: 1  MDKSMLGDLDGLPEEDKMRMAAMVDQLQIRDSLRMYNSLVERCFTDCVDTFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          E+CVRRCAEKFLKHSMRVG+RFAELNQG  T D
Sbjct: 61 ESCVRRCAEKFLKHSMRVGMRFAELNQGVATPD 93

[Close]

BLAST of Spo09414.1 vs. ExPASy Swiss-Prot
Match: TIM9_ARATH (Mitochondrial import inner membrane translocase subunit TIM9 OS=Arabidopsis thaliana GN=TIM9 PE=1 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 3.100e-38
Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MD +M+  LD LPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DCVDSF RK+L KQE
Sbjct: 1  MDASMMAGLDGLPEEDKAKMASMIDQLQLRDSLRMYNSLVERCFVDCVDSFTRKSLQKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCV RCAEKFLKH+MRVG+RFAELNQ APTQD
Sbjct: 61 ETCVMRCAEKFLKHTMRVGMRFAELNQNAPTQD 93

[Close]

BLAST of Spo09414.1 vs. ExPASy Swiss-Prot
Match: TIM9_ZYGBA (Mitochondrial import inner membrane translocase subunit Tim9 OS=Zygosaccharomyces bailii GN=TIM9 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.800e-17
Identity = 39/78 (50.00%), Postives = 58/78 (74.36%), Query Frame = 1


		  
Query: 9  LDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQEETCVRRCA 68
          +D+L   ++ + + +I+  Q++D +R+Y++LVERCFTDCV+ F    L  +E+TC+ RC+
Sbjct: 1  MDSLNPREQQEFSKLIEHKQMKDFMRLYSNLVERCFTDCVNDFTSSKLTSKEQTCISRCS 60

Query: 69 EKFLKHSMRVGLRFAELN 87
          EKFLKHS RVGLRF E N
Sbjct: 61 EKFLKHSERVGLRFQEQN 78

[Close]

BLAST of Spo09414.1 vs. ExPASy Swiss-Prot
Match: TIM9_YARLI (Mitochondrial import inner membrane translocase subunit TIM9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TIM9 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.000e-17
Identity = 38/78 (48.72%), Postives = 57/78 (73.08%), Query Frame = 1


		  
Query: 9  LDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQEETCVRRCA 68
          +D L   ++ +   +++Q Q++D +R+Y+SLV+RCFTDCV+ F  K L  +EE+C+ +C+
Sbjct: 1  MDQLNNREQQEFQQLVEQKQMKDFMRLYSSLVQRCFTDCVNDFTSKALSSREESCLEKCS 60

Query: 69 EKFLKHSMRVGLRFAELN 87
          EKFLKHS RVG RF E N
Sbjct: 61 EKFLKHSERVGQRFQEQN 78

[Close]

BLAST of Spo09414.1 vs. TAIR (Arabidopsis)
Match: AT3G46560.1 (Tim10/DDP family zinc finger protein)

HSP 1 Score: 158.7 bits (400), Expect = 1.800e-39
Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 1


		  
Query: 1  MDKNMLGDLDNLPEEDKMKMAAMIDQLQIRDSLRMYNSLVERCFTDCVDSFRRKTLDKQE 60
          MD +M+  LD LPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DCVDSF RK+L KQE
Sbjct: 1  MDASMMAGLDGLPEEDKAKMASMIDQLQLRDSLRMYNSLVERCFVDCVDSFTRKSLQKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGLRFAELNQGAPTQD 94
          ETCV RCAEKFLKH+MRVG+RFAELNQ APTQD
Sbjct: 61 ETCVMRCAEKFLKHTMRVGMRFAELNQNAPTQD 93

The following BLAST results are available for this feature:

BLAST of Spo09414.1 vs. NCBI nr
BLAST of Spo09414.1 vs. UniProtKB/TrEMBL
BLAST of Spo09414.1 vs. ExPASy Swiss-Prot
BLAST of Spo09414.1 vs. TAIR (Arabidopsis)

BLAST of Spo09414.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902160928\|gb\|KNA06494.1\|	2.0e-45	100.	hypothetical protein SOVF_1801...	[more]
gi\|731334059\|ref\|XP_010678046.1\|	2.2e-44	97.8	PREDICTED: mitochondrial impor...	[more]
gi\|12230182\|sp\|Q9XGX8.1\|TIM9_MESCR	6.1e-42	92.4	RecName: Full=Mitochondrial im...	[more]
gi\|848911139\|ref\|XP_012854051.1\|	1.0e-41	90.3	PREDICTED: mitochondrial impor...	[more]
gi\|527204485\|gb\|EPS70642.1\|	1.4e-41	90.3	hypothetical protein M569_0412...	[more]

BLAST of Spo09414.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QGR1_SPIOL	1.4e-45	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CG74_BETVU	1.6e-44	97.8	Uncharacterized protein OS=Bet...	[more]
A0A022Q8Q6_ERYGU	7.2e-42	90.3	Uncharacterized protein OS=Ery...	[more]
S8EDL1_9LAMI	9.4e-42	90.3	Uncharacterized protein OS=Gen...	[more]
M1BNQ0_SOLTU	3.6e-41	89.2	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo09414.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TIM9_MESCR	3.8e-44	92.4	Mitochondrial import inner mem...	[more]
TIM9_ORYSJ	9.4e-43	89.2	Mitochondrial import inner mem...	[more]
TIM9_ARATH	3.1e-38	81.7	Mitochondrial import inner mem...	[more]
TIM9_ZYGBA	1.8e-17	50.0	Mitochondrial import inner mem...	[more]
TIM9_YARLI	3.0e-17	48.7	Mitochondrial import inner mem...	[more]

BLAST of Spo09414.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G46560.1	1.8e-39	81.7	Tim10/DDP family zinc finger p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004217	Tim10/DDP family zinc finger	GENE3D	1.10.287.810		coord: 25..85 score: 1.3
IPR004217	Tim10/DDP family zinc finger	PFAM	PF02953	zf-Tim10_DDP	coord: 25..84 score: 1.4
IPR004217	Tim10/DDP family zinc finger	unknown	SSF144122	Tim10-like	coord: 28..88 score: 7.19
None	No IPR available	PANTHER	PTHR10898	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9	coord: 1..93 score: 1.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0015031	protein transport
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0042545	cell wall modification
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0010389	regulation of G2/M transition of mitotic cell cycle
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0022414	reproductive process
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0032776	DNA methylation on cytosine
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0042176	regulation of protein catabolic process
biological_process	GO:0006268	DNA unwinding involved in DNA replication
biological_process	GO:0008033	tRNA processing
biological_process	GO:0006270	DNA replication initiation
biological_process	GO:0071702	organic substance transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0009987	cellular process
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006306	DNA methylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
biological_process	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process
biological_process	GO:0009186	deoxyribonucleoside diphosphate metabolic process
biological_process	GO:0008283	cell proliferation
biological_process	GO:0007049	cell cycle
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0016571	histone methylation
biological_process	GO:0001510	RNA methylation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006269	DNA replication, synthesis of RNA primer
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0051604	protein maturation
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0006164	purine nucleotide biosynthetic process
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0016020	membrane
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005971	ribonucleoside-diphosphate reductase complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0046809	replication compartment
cellular_component	GO:0042555	MCM complex
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005657	replication fork
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000785	chromatin
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity
molecular_function	GO:0003688	DNA replication origin binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003896	DNA primase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0005488	binding
molecular_function	GO:0030234	enzyme regulator activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003746	translation elongation factor activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25954	0.73	Barchart \| Table
Spo16627	0.72	Barchart \| Table
Spo00525	0.72	Barchart \| Table
Spo22394	0.71	Barchart \| Table
Spo23241	0.71	Barchart \| Table
Spo13481	0.70	Barchart \| Table
Spo09563	0.70	Barchart \| Table
Spo27223	0.70	Barchart \| Table
Spo02380	0.70	Barchart \| Table
Spo04381	0.70	Barchart \| Table
Spo04454	0.70	Barchart \| Table
Spo22410	0.70	Barchart \| Table
Spo18647	0.70	Barchart \| Table
Spo16097	0.70	Barchart \| Table
Spo06501	0.70	Barchart \| Table
Spo07432	0.70	Barchart \| Table
Spo05589	0.69	Barchart \| Table
Spo25669	0.69	Barchart \| Table
Spo07402	0.69	Barchart \| Table
Spo15751	0.69	Barchart \| Table
Spo00689	0.69	Barchart \| Table
Spo03046	0.69	Barchart \| Table
Spo11943	0.69	Barchart \| Table
Spo02189	0.69	Barchart \| Table
Spo03105	0.68	Barchart \| Table
Spo07075	0.68	Barchart \| Table
Spo07920	0.68	Barchart \| Table
Spo23681	0.68	Barchart \| Table
Spo25181	0.68	Barchart \| Table
Spo26318	0.68	Barchart \| Table
Spo22310	0.67	Barchart \| Table
Spo12311	0.67	Barchart \| Table
Spo11026	0.67	Barchart \| Table
Spo10599	0.67	Barchart \| Table
Spo03473	0.67	Barchart \| Table
Spo02218	0.67	Barchart \| Table
Spo09353	0.67	Barchart \| Table
Spo02838	0.67	Barchart \| Table
Spo12598	0.67	Barchart \| Table
Spo00170	0.67	Barchart \| Table
Spo09833	0.67	Barchart \| Table
Spo04531	0.66	Barchart \| Table
Spo22740	0.66	Barchart \| Table
Spo24414	0.66	Barchart \| Table
Spo24703	0.66	Barchart \| Table
Spo25635	0.66	Barchart \| Table
Spo04667	0.66	Barchart \| Table
Spo12593	0.66	Barchart \| Table
Spo13279	0.66	Barchart \| Table
Spo05632	0.66	Barchart \| Table
Spo05461	0.66	Barchart \| Table
Spo17780	0.66	Barchart \| Table
Spo18434	0.66	Barchart \| Table
Spo18449	0.66	Barchart \| Table
Spo18532	0.66	Barchart \| Table
Spo04945	0.66	Barchart \| Table
Spo11850	0.66	Barchart \| Table
Spo26636	0.66	Barchart \| Table
Spo24475	0.65	Barchart \| Table
Spo26735	0.65	Barchart \| Table
Spo08816	0.65	Barchart \| Table
Spo20647	0.65	Barchart \| Table
Spo05783	0.65	Barchart \| Table
Spo26851	0.65	Barchart \| Table