Spo09445 (gene) | SpinachBase

Overview


Name	Spo09445
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Prenylated RAB acceptor 1.H, putative
Location	chr4 : 90489612 .. 90492843 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATTCTGTGCCGGTCAAATCGGGTCGAGTATTCCGGGACGGAGGGAGTATCTACTGCTACAAAACTACGAGTTATAAACTCCATTTTTCAGTTCTTCACCTCCGCCACCTACTCATCATTTCCCGGGGGAAAAAATATGGCATTCGCAAGCAACCCCTTATCTCTAAGCGTCCCCGAGCAAGCCTTCGAGACATGGCTCCGCGACTCCGGCTACCTCGAAATCCTCGACCACCGCACAACCCAACTCCACAACCTCAATTCCTCCACACCCACCACCGTCAAAACCGCCACCACCACCGCACCAACCTCCACCACAGCAACCACTACCACACCCACAATCACCAACCTCAGAAGAACCCCAACGTCCACAATCACAGCCATAGCTTATGGCCTTACCATGTCTCTCCTTTCTTCTTTTGCCATCATTTTCTCTCTCCTCACTCTAAACCCCTTTGCCAAACTCACCTCCTCTGACTTTTCATCGCAAAATTCACCATCTTGGACTTCTTCTGGGTTTCTGGGTTCTTCTGATTCTTACTCTTTTCCGTCTTCTTCTACCCAGGCAAAGATGCGTGTTCATGAGAATGTTAAGCGTTTTGCCAAGAATTATGCTACTCTATTGATTCTCTTCTTCGCATGTTCTTTGTATGTTTGATTTCTTCTTTTTCTTTTTTCATTGGCTTGTTTTTCTTACGGCGAGCAGAAATGTGGCCGGGATTCGATCTCGGGTCATGGGTATTATCCTGATACTTTATCGACTAACCCAGTTGACATCCCCTAATTGAGTTGCTTTCTAATTTGGTTACTTTAGGGTATAATTTGTTTATGTTTTTACTTTCTGTTGATTTATTCATCTGGGTTTCTTTATAATTCGACTAATTTGCGCTATAATTATTTGAATTGGTATTTTCTGTCATAGCTAGTGGATTTTTTTAATGATAATTTGCACGAAATTCGAACAATTGGGAATGTATAGTTACGTTTTGATGATTGTTGGGCTTAGGGAATTGAGTATAGATCTTGCTGTTGTCCCTTGTTAACACCAAAACCTGTAATTTAATGACATTTCCCAAGTTGTAGGACTTGTGTGAATATGTGGTGTTTAAATGTAATCATTCTACTTGGGGTGGTCGTGTTCTCGATATAATTCACTGTATTAACCAACAGTAGATGAATCTGCTTAGCTTCTGGTTTAGTGGCTTATGACTAGTCCTGGGTTTACTTATCATCATTAGGCCCATGAAGCTAGTTTCCATGTTGTAACTAGTTGATCAAGTAGAATACAGTACTTGCGTTCACATCGGTTGTGCTGTACATGTTTTAGTCTGATGCGACATTTAATTATGAAAAGTTCCTTTATGATTTTTGTTTTCTTATGTTCTTTGTTGCTGGGTGATAGGTATCAAATGCCACTTGCTTTGGTTGGGTTGGTATCATGTTTAGCAATGTGGGAATTGTTCAGGTTTTGTGACAATAGATGGGCACTTGATAGGTTTTCTGCCATTCGTCCAGTTGTGATTCGCATAGCTCAATTTGGTGAGTCTCCTACGGAAAATTTGTTCACTTGTTCATATGATGATTTTTGGCATCAGTCATCAGTTACCAACTCTGTAACTTTTGAGGAATTTGGTATCTGCTGACTTCTGTTTGCATACCATAAAGTTCTAATTTCGTCACATAGCTGAATTCTTGTGGTTCTTGTTATGCCGATATGTCATTACACATGCTTTGCGGTGATTCGTGTTTTCTGATTATTAGTAGCCATAGATTGTTGAAACGAGTTTTAGTTCTTATGACCGACATTTGCAGTTTTAGAGATGGTTTTCCTTGTTAAGATGTTATTGGAGCCTTATGATGGATGGGAAAACTGAAGCTCACTTTCCACTAAAAGACACCTTAAGATGCCAAATAGAACTCTGTAACCCATGCGTCCTCTGATGAATGTCAAAAACAATTCAGCTTTTATGAGTTTTTTCTCTAGTTGTCTCATGACAATATTACACCCTCAGGCCCCATCGGCGACTTTCCTTTCTTGAAAGGAGTAATCACTCTTGTTTGAAGGGTTTTATTCTGCGATGTAGGTAGCATATAGGGGTAATTTCTTTTTCATGCGTGCTTTGATTTTTTGAAATCTTCTGTCTGCATCACTGAATCAGGCTTTGTTATGCCTAGCTCGCTTCATTCACCTCTCATTGTCTTCCTTAATAAATCTCAGCAGTATTTGTTAAAATTTTTGTTGGATATGCTGGTGCTGTTACAGAACTGAAAGCTGTTATTGGCAGATTATGTTTGCATAGATATCAAATGACAAAAAAAAATTATAGACCATTTGGATGATGTCTGCCGCTTATCCTAGGTGCCAGGCCTTGAATAGTTGAATGCATTTGGTGTCAGTGTAAAAGCATTTCCTTTGCCCTTCTACCCCTACAACTCCTCCCTCCTTCTGGGCGCTGAAAGAAAAGGGGAAAGAATAGGTTATGTTTGGTTTTGAGAATGCTACAACCAATTTCTCTATATCTCTATTCTCTCACAAGATAAAGCTGTTTTGCTGGTTCTGTGGAAGTGTGTCAGATATATATATGAATGGGGTAAATTAAGTGGGTAGAAGTGATAATAAGGTGCTGTTTACAAACTTACAAGTCATTTATCATACGCTGAGAGGTCCCTGTGGGAGCTTGATCCATGACATATTTGCTAGTATGCATTGTAATCTTATTAATCTTGGTTTACTAGCTCAACCTACAGTATGTTTGGATAAGAGGAAACGGAGAGAAAGGGAGGGAAGGGAAATTGGAGAGATTTGATGGGAAAATGAAGCTCCACCTTGCCCTCCCCTTCCTTTTTTTTCCTTCTATCTTGCTATCCAAACAAAGTATTGCGGAAGCTGTGTGTGTGAGTGTTGGAATATTACATTCTGGTATTGCTATTTGCCGTCTACTGCAAATGGTGACTTGTAAGTTGTAATGAAGTGCATTCTAAACTTCTTGAAATGCGTTTTCATGTCTTGCAGGTGTTGCAGTCATTTTATTCTGGGCCAATGTTCAGTTGGCTGTCTTCTGCACTCTTGGAGTTGGTTACACAGGTATGTATTAGATCTCTACTTCTGGTGATCCTTAACTTTTTCTGTTATGCTGATTTATTTTATTTTTCTGTGTTCAGCTATGATGTTACATGCTTCTTTTCGCAAGCTCACTCCTGCAAAACAACTTTCCAAAGGAAGAGGGAGATGA

mRNA sequence

TAAATTCTGTGCCGGTCAAATCGGGTCGAGTATTCCGGGACGGAGGGAGTATCTACTGCTACAAAACTACGAGTTATAAACTCCATTTTTCAGTTCTTCACCTCCGCCACCTACTCATCATTTCCCGGGGGAAAAAATATGGCATTCGCAAGCAACCCCTTATCTCTAAGCGTCCCCGAGCAAGCCTTCGAGACATGGCTCCGCGACTCCGGCTACCTCGAAATCCTCGACCACCGCACAACCCAACTCCACAACCTCAATTCCTCCACACCCACCACCGTCAAAACCGCCACCACCACCGCACCAACCTCCACCACAGCAACCACTACCACACCCACAATCACCAACCTCAGAAGAACCCCAACGTCCACAATCACAGCCATAGCTTATGGCCTTACCATGTCTCTCCTTTCTTCTTTTGCCATCATTTTCTCTCTCCTCACTCTAAACCCCTTTGCCAAACTCACCTCCTCTGACTTTTCATCGCAAAATTCACCATCTTGGACTTCTTCTGGGTTTCTGGGTTCTTCTGATTCTTACTCTTTTCCGTCTTCTTCTACCCAGGCAAAGATGCGTGTTCATGAGAATGTTAAGCGTTTTGCCAAGAATTATGCTACTCTATTGATTCTCTTCTTCGCATGTTCTTTGTATCAAATGCCACTTGCTTTGGTTGGGTTGGTATCATGTTTAGCAATGTGGGAATTGTTCAGGTTTTGTGACAATAGATGGGCACTTGATAGGTTTTCTGCCATTCGTCCAGTTGTGATTCGCATAGCTCAATTTGGTGTTGCAGTCATTTTATTCTGGGCCAATGTTCAGTTGGCTGTCTTCTGCACTCTTGGAGTTGGTTACACAGCTATGATGTTACATGCTTCTTTTCGCAAGCTCACTCCTGCAAAACAACTTTCCAAAGGAAGAGGGAGATGA

Coding sequence (CDS)

ATGGCATTCGCAAGCAACCCCTTATCTCTAAGCGTCCCCGAGCAAGCCTTCGAGACATGGCTCCGCGACTCCGGCTACCTCGAAATCCTCGACCACCGCACAACCCAACTCCACAACCTCAATTCCTCCACACCCACCACCGTCAAAACCGCCACCACCACCGCACCAACCTCCACCACAGCAACCACTACCACACCCACAATCACCAACCTCAGAAGAACCCCAACGTCCACAATCACAGCCATAGCTTATGGCCTTACCATGTCTCTCCTTTCTTCTTTTGCCATCATTTTCTCTCTCCTCACTCTAAACCCCTTTGCCAAACTCACCTCCTCTGACTTTTCATCGCAAAATTCACCATCTTGGACTTCTTCTGGGTTTCTGGGTTCTTCTGATTCTTACTCTTTTCCGTCTTCTTCTACCCAGGCAAAGATGCGTGTTCATGAGAATGTTAAGCGTTTTGCCAAGAATTATGCTACTCTATTGATTCTCTTCTTCGCATGTTCTTTGTATCAAATGCCACTTGCTTTGGTTGGGTTGGTATCATGTTTAGCAATGTGGGAATTGTTCAGGTTTTGTGACAATAGATGGGCACTTGATAGGTTTTCTGCCATTCGTCCAGTTGTGATTCGCATAGCTCAATTTGGTGTTGCAGTCATTTTATTCTGGGCCAATGTTCAGTTGGCTGTCTTCTGCACTCTTGGAGTTGGTTACACAGCTATGATGTTACATGCTTCTTTTCGCAAGCTCACTCCTGCAAAACAACTTTCCAAAGGAAGAGGGAGATGA

Protein sequence

MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTTATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSPSWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGLVSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTAMMLHASFRKLTPAKQLSKGRGR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo09445.1	Spo09445.1	mRNA

Homology

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BLAST of Spo09445.1 vs. NCBI nr
Match: gi|902145422|gb|KNA04976.1| (hypothetical protein SOVF_194660 [Spinacia oleracea])

HSP 1 Score: 483.8 bits (1244), Expect = 1.900e-133
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT
Sbjct: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
           ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP
Sbjct: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL
Sbjct: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA
Sbjct: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240

Query: 241 MMLHASFRKLTPAKQLSKGRGR 263
           MMLHASFRKLTPAKQLSKGRGR
Sbjct: 241 MMLHASFRKLTPAKQLSKGRGR 262

[Close]

BLAST of Spo09445.1 vs. NCBI nr
Match: gi|731329249|ref|XP_010675489.1| (PREDICTED: PRA1 family protein H [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 393.7 bits (1010), Expect = 2.600e-106
Identity = 216/262 (82.44%), Postives = 227/262 (86.64%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           MAFASNPLSLSVPEQAFE+WLRDSGYLE+LDHRTTQ+HNLNSS           APTSTT
Sbjct: 1   MAFASNPLSLSVPEQAFESWLRDSGYLEVLDHRTTQVHNLNSS-----------APTSTT 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
            T  T TI   RRT T+TITAIAYGLTMSLLSS   IFSLLTLNPFAKLTSSDFS  NSP
Sbjct: 61  TTAPTRTIPLTRRTTTTTITAIAYGLTMSLLSSLTTIFSLLTLNPFAKLTSSDFSHLNSP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWTSSGFLGS DSYSFPSSSTQAKMRVHENVKRFA+NYA LL++FFACSLYQMPLALVGL
Sbjct: 121 SWTSSGFLGSYDSYSFPSSSTQAKMRVHENVKRFARNYAALLLVFFACSLYQMPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           VSCL +WELFRFCD+RWA  R SAIR V+IRIAQ  VAVILFW NVQ+AVFCTLGVGYT 
Sbjct: 181 VSCLVLWELFRFCDDRWAFHRLSAIREVLIRIAQCAVAVILFWCNVQMAVFCTLGVGYTV 240

Query: 241 MMLHASFRKLTPAKQLSKGRGR 263
           MMLHASFRKLTPAKQLSKGRGR
Sbjct: 241 MMLHASFRKLTPAKQLSKGRGR 251

[Close]

BLAST of Spo09445.1 vs. NCBI nr
Match: gi|661890448|emb|CDP05945.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 259.6 bits (662), Expect = 5.800e-66
Identity = 145/255 (56.86%), Postives = 189/255 (74.12%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           M F+SNPL+LSVP+ AFE+WLR+ GYLEILD RT+ LH L  ST T+   A  ++P+S++
Sbjct: 1   MVFSSNPLALSVPDPAFESWLRNKGYLEILDQRTSDLHRL--STSTSAAAAVQSSPSSSS 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
           +   T T            T I YGL +SL S    +FSLLTLNPF+KLTS DFS  ++P
Sbjct: 61  SNAATAT------------TTIPYGLFISLFSHLKTLFSLLTLNPFSKLTSDDFSG-DTP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWT++ F+GS +SYSFP+S  QA++R HENVKRFA+NYA+L ILFFACSLYQMPLALVGL
Sbjct: 121 SWTNA-FIGSFNSYSFPTSPAQARLRAHENVKRFARNYASLFILFFACSLYQMPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           ++CLA+W++FR+C +RW LD++   R  ++RIAQ   AVILF++NVQ+ + C L V Y  
Sbjct: 181 IACLALWDVFRYCGDRWQLDQYPVFRQTLVRIAQCTTAVILFFSNVQVTLLCALSVSYAV 239

Query: 241 MMLHASFRKLTPAKQ 256
           ++LHAS RKLTP KQ
Sbjct: 241 LVLHASLRKLTPGKQ 239

[Close]

BLAST of Spo09445.1 vs. NCBI nr
Match: gi|659127406|ref|XP_008463685.1| (PREDICTED: PRA1 family protein H [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 3.200e-64
Identity = 135/254 (53.15%), Postives = 181/254 (71.26%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           M+F+SNPLSLSVP+ AF++WLRDSGYLEILD RT+ LH  +S+ P T  T T  AP +T 
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLAT- 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
                                   G  +SL S  A + S+ TLNPF+KL+++DFS   +P
Sbjct: 61  ------------------------GFFISLFSRIATLLSVFTLNPFSKLSAADFSGP-TP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWTS GF+G  +SYSFPSS  QA++RVHEN KR+A+NYA+L +LFF C+LYQMPLAL+GL
Sbjct: 121 SWTS-GFVGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           +SCLA+W++ +FC +RW LD++  +   ++RIAQ   A+IL ++N Q+A+FC LG+GYT 
Sbjct: 181 ISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTG 227

Query: 241 MMLHASFRKLTPAK 255
           M+LHA+FRKLTP K
Sbjct: 241 MILHAAFRKLTPTK 227

[Close]

BLAST of Spo09445.1 vs. NCBI nr
Match: gi|449456631|ref|XP_004146052.1| (PREDICTED: PRA1 family protein H [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 1.600e-63
Identity = 134/257 (52.14%), Postives = 180/257 (70.04%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           M+F+SNPLSLSVP+ AF++WLRDSGYLEILD RT+ LH  +S+ P    T T  AP +T 
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLAT- 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
                                   G  +SL S  A + S+ TLNPFAKL+++DFS   +P
Sbjct: 61  ------------------------GFFISLFSRIATLLSIFTLNPFAKLSAADFSGP-TP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWT+ GF+G  +SYSFPSS  QA++RVHEN KR+A+NYA+L +LFF C+LYQMPLAL+GL
Sbjct: 121 SWTT-GFVGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           +SCLA+W++ +FC +RW LD++  +   ++RIAQ    +IL ++N Q+A+FC LG+GYT 
Sbjct: 181 ISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTG 230

Query: 241 MMLHASFRKLTPAKQLS 258
           M+LHA+FRKLTP K  S
Sbjct: 241 MILHAAFRKLTPTKPTS 230

[Close]

BLAST of Spo09445.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEK0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194660 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.300e-133
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT
Sbjct: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
           ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP
Sbjct: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL
Sbjct: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA
Sbjct: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240

Query: 241 MMLHASFRKLTPAKQLSKGRGR 263
           MMLHASFRKLTPAKQLSKGRGR
Sbjct: 241 MMLHASFRKLTPAKQLSKGRGR 262

[Close]

BLAST of Spo09445.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CM84_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g086800 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.800e-106
Identity = 216/262 (82.44%), Postives = 227/262 (86.64%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           MAFASNPLSLSVPEQAFE+WLRDSGYLE+LDHRTTQ+HNLNSS           APTSTT
Sbjct: 1   MAFASNPLSLSVPEQAFESWLRDSGYLEVLDHRTTQVHNLNSS-----------APTSTT 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
            T  T TI   RRT T+TITAIAYGLTMSLLSS   IFSLLTLNPFAKLTSSDFS  NSP
Sbjct: 61  TTAPTRTIPLTRRTTTTTITAIAYGLTMSLLSSLTTIFSLLTLNPFAKLTSSDFSHLNSP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWTSSGFLGS DSYSFPSSSTQAKMRVHENVKRFA+NYA LL++FFACSLYQMPLALVGL
Sbjct: 121 SWTSSGFLGSYDSYSFPSSSTQAKMRVHENVKRFARNYAALLLVFFACSLYQMPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           VSCL +WELFRFCD+RWA  R SAIR V+IRIAQ  VAVILFW NVQ+AVFCTLGVGYT 
Sbjct: 181 VSCLVLWELFRFCDDRWAFHRLSAIREVLIRIAQCAVAVILFWCNVQMAVFCTLGVGYTV 240

Query: 241 MMLHASFRKLTPAKQLSKGRGR 263
           MMLHASFRKLTPAKQLSKGRGR
Sbjct: 241 MMLHASFRKLTPAKQLSKGRGR 251

[Close]

BLAST of Spo09445.1 vs. UniProtKB/TrEMBL
Match: A0A068UBK6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021270001 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.100e-66
Identity = 145/255 (56.86%), Postives = 189/255 (74.12%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           M F+SNPL+LSVP+ AFE+WLR+ GYLEILD RT+ LH L  ST T+   A  ++P+S++
Sbjct: 1   MVFSSNPLALSVPDPAFESWLRNKGYLEILDQRTSDLHRL--STSTSAAAAVQSSPSSSS 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
           +   T T            T I YGL +SL S    +FSLLTLNPF+KLTS DFS  ++P
Sbjct: 61  SNAATAT------------TTIPYGLFISLFSHLKTLFSLLTLNPFSKLTSDDFSG-DTP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWT++ F+GS +SYSFP+S  QA++R HENVKRFA+NYA+L ILFFACSLYQMPLALVGL
Sbjct: 121 SWTNA-FIGSFNSYSFPTSPAQARLRAHENVKRFARNYASLFILFFACSLYQMPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           ++CLA+W++FR+C +RW LD++   R  ++RIAQ   AVILF++NVQ+ + C L V Y  
Sbjct: 181 IACLALWDVFRYCGDRWQLDQYPVFRQTLVRIAQCTTAVILFFSNVQVTLLCALSVSYAV 239

Query: 241 MMLHASFRKLTPAKQ 256
           ++LHAS RKLTP KQ
Sbjct: 241 LVLHASLRKLTPGKQ 239

[Close]

BLAST of Spo09445.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L4P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G630550 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.100e-63
Identity = 134/257 (52.14%), Postives = 180/257 (70.04%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           M+F+SNPLSLSVP+ AF++WLRDSGYLEILD RT+ LH  +S+ P    T T  AP +T 
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLAT- 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
                                   G  +SL S  A + S+ TLNPFAKL+++DFS   +P
Sbjct: 61  ------------------------GFFISLFSRIATLLSIFTLNPFAKLSAADFSGP-TP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWT+ GF+G  +SYSFPSS  QA++RVHEN KR+A+NYA+L +LFF C+LYQMPLAL+GL
Sbjct: 121 SWTT-GFVGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           +SCLA+W++ +FC +RW LD++  +   ++RIAQ    +IL ++N Q+A+FC LG+GYT 
Sbjct: 181 ISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTG 230

Query: 241 MMLHASFRKLTPAKQLS 258
           M+LHA+FRKLTP K  S
Sbjct: 241 MILHAAFRKLTPTKPTS 230

[Close]

BLAST of Spo09445.1 vs. UniProtKB/TrEMBL
Match: A0A061FF31_THECC (Prenylated RAB acceptor 1.H, putative OS=Theobroma cacao GN=TCM_031603 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.200e-63
Identity = 145/260 (55.77%), Postives = 181/260 (69.62%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           M F+SNPLSLSVP+  FETWLRDSGYL+++D   +               AT  A T T 
Sbjct: 1   MVFSSNPLSLSVPDPTFETWLRDSGYLDVIDDHQS------------AAAATDPASTITE 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
           +TTT P            IT I +G  +SL S   I+ SL TLNPF+KLT++DFS + +P
Sbjct: 61  STTTIP------------ITGILWGYLVSLFSHLWILLSLFTLNPFSKLTTNDFSGE-TP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
           SWT  GF G   SYSFP++ +QA++RVHENVKR+A+NYA+L ILFFACSLYQ+PLALVGL
Sbjct: 121 SWTK-GFFGDCGSYSFPAAVSQARLRVHENVKRYARNYASLFILFFACSLYQLPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           +S LA+W+LFRF  ++W LD F A + V+IRIAQ   AVIL W NVQ+A+ C LGV Y  
Sbjct: 181 ISSLALWDLFRFFSDKWELDGFPATQQVLIRIAQCATAVILVWLNVQMALCCALGVSYIV 234

Query: 241 MMLHASFRKLTPAKQLSKGR 261
           M+LHA+FRKLTP KQ S+GR
Sbjct: 241 MILHAAFRKLTPVKQPSRGR 234

[Close]

BLAST of Spo09445.1 vs. ExPASy Swiss-Prot
Match: PRA1H_ARATH (PRA1 family protein H OS=Arabidopsis thaliana GN=PRA1H PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.700e-62
Identity = 136/260 (52.31%), Postives = 186/260 (71.54%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           MAF+ NPLSLSVP+ AFE+WLRDSGYLE+LDHRT+               A+++A  S++
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTS----------AAAAAASSSASVSSS 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
           A  T+    ++       +++I  G   SLLS    + SLLT+NPF+KL++ DFS   +P
Sbjct: 61  AAATSAASDDV-------VSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
            WT+ GF+G+ DSYSFPSSS QA+MRVHEN+KRFA+NYATL I+FFAC+LYQMPLALVGL
Sbjct: 121 -WTT-GFIGNCDSYSFPSSSQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           +  LA+WELF++C ++W  DR  ++R + I I Q   AV+L + NVQ+A+F  L + Y+ 
Sbjct: 181 LGSLALWELFKYCSDKWKFDRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSV 240

Query: 241 MMLHASFRKLTPAKQLSKGR 261
           M+LHA FRKLTP+K+ ++GR
Sbjct: 241 MILHAGFRKLTPSKKPTRGR 241

[Close]

BLAST of Spo09445.1 vs. TAIR (Arabidopsis)
Match: AT4G27540.1 (prenylated RAB acceptor 1.H)

HSP 1 Score: 238.8 bits (608), Expect = 3.800e-63
Identity = 136/260 (52.31%), Postives = 186/260 (71.54%), Query Frame = 1

		  
Query: 1   MAFASNPLSLSVPEQAFETWLRDSGYLEILDHRTTQLHNLNSSTPTTVKTATTTAPTSTT 60
           MAF+ NPLSLSVP+ AFE+WLRDSGYLE+LDHRT+               A+++A  S++
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTS----------AAAAAASSSASVSSS 60

Query: 61  ATTTTPTITNLRRTPTSTITAIAYGLTMSLLSSFAIIFSLLTLNPFAKLTSSDFSSQNSP 120
           A  T+    ++       +++I  G   SLLS    + SLLT+NPF+KL++ DFS   +P
Sbjct: 61  AAATSAASDDV-------VSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTP 120

Query: 121 SWTSSGFLGSSDSYSFPSSSTQAKMRVHENVKRFAKNYATLLILFFACSLYQMPLALVGL 180
            WT+ GF+G+ DSYSFPSSS QA+MRVHEN+KRFA+NYATL I+FFAC+LYQMPLALVGL
Sbjct: 121 -WTT-GFIGNCDSYSFPSSSQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGL 180

Query: 181 VSCLAMWELFRFCDNRWALDRFSAIRPVVIRIAQFGVAVILFWANVQLAVFCTLGVGYTA 240
           +  LA+WELF++C ++W  DR  ++R + I I Q   AV+L + NVQ+A+F  L + Y+ 
Sbjct: 181 LGSLALWELFKYCSDKWKFDRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSV 240

Query: 241 MMLHASFRKLTPAKQLSKGR 261
           M+LHA FRKLTP+K+ ++GR
Sbjct: 241 MILHAGFRKLTPSKKPTRGR 241

The following BLAST results are available for this feature:

BLAST of Spo09445.1 vs. NCBI nr
BLAST of Spo09445.1 vs. UniProtKB/TrEMBL
BLAST of Spo09445.1 vs. ExPASy Swiss-Prot
BLAST of Spo09445.1 vs. TAIR (Arabidopsis)

BLAST of Spo09445.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902145422\|gb\|KNA04976.1\|	1.9e-133	100.	hypothetical protein SOVF_1946...	[more]
gi\|731329249\|ref\|XP_010675489.1\|	2.6e-106	82.4	PREDICTED: PRA1 family protein...	[more]
gi\|661890448\|emb\|CDP05945.1\|	5.8e-66	56.8	unnamed protein product [Coffe...	[more]
gi\|659127406\|ref\|XP_008463685.1\|	3.2e-64	53.1	PREDICTED: PRA1 family protein...	[more]
gi\|449456631\|ref\|XP_004146052.1\|	1.6e-63	52.1	PREDICTED: PRA1 family protein...	[more]

BLAST of Spo09445.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QEK0_SPIOL	1.3e-133	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CM84_BETVU	1.8e-106	82.4	Uncharacterized protein OS=Bet...	[more]
A0A068UBK6_COFCA	4.1e-66	56.8	Uncharacterized protein OS=Cof...	[more]
A0A0A0L4P4_CUCSA	1.1e-63	52.1	Uncharacterized protein OS=Cuc...	[more]
A0A061FF31_THECC	4.2e-63	55.7	Prenylated RAB acceptor 1.H, p...	[more]

BLAST of Spo09445.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
PRA1H_ARATH	6.7e-62	52.3	PRA1 family protein H OS=Arabi...	[more]

BLAST of Spo09445.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT4G27540.1	3.8e-63	52.3	prenylated RAB acceptor 1.H	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 125..249 score: 1.9
None	No IPR available	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 7..61 score: 4.2E-82coord: 85..255 score: 4.2
None	No IPR available	PANTHER	PTHR19317:SF1	PRA1 FAMILY PROTEIN 2	coord: 7..61 score: 4.2E-82coord: 85..255 score: 4.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0009853	photorespiration
biological_process	GO:0006754	ATP biosynthetic process
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0016573	histone acetylation
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0080129	proteasome core complex assembly
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:0005778	peroxisomal membrane
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004402	histone acetyltransferase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0051536	iron-sulfur cluster binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo00918	0.73	Barchart \| Table
Spo25340	0.72	Barchart \| Table
Spo25304	0.72	Barchart \| Table
Spo16436	0.70	Barchart \| Table
Spo25990	0.68	Barchart \| Table
Spo11336	0.68	Barchart \| Table
Spo01224	0.67	Barchart \| Table
Spo25655	0.66	Barchart \| Table
Spo13906	0.66	Barchart \| Table
Spo01066	0.65	Barchart \| Table
Spo02159	0.65	Barchart \| Table
Spo23152	0.65	Barchart \| Table
Spo14368	0.65	Barchart \| Table