Spo09625 (gene)

Overview
NameSpo09625
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 5522391 .. 5523291 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTGGGAAGACATATACGCTCAAGCTCAAAGTCAACAAGAAAGGATACATACAAGAGCTGAGATACTAAAAGAAATAAAAAAGGAGGGCCAGTCAAACAAAAAATACAAAATCAATAGGTAATGACCTTATCAAAACCCAAATCAAATAGACATTAAAAAAACATATACAGTGTCAATATTACGCATGTACTATTTGAGAATTGTTATACTAACATGTTACAACAATACAGTTATACAACAACACCATCACAACAACAAAGGATATACCCACAACAAGCACAACCCCAACTACAAACCAAGACCCAACCCAGCTAACGGACGACGGACCAAACTCCTGAAATATGAGCCAACTTGGTCTTGTGCATTACATGGGTTCTTCCTATAAAGGGGATACTACTCCGTACTTTTTTATATTTTAAAACAATGTTAAGAGGTGTACATTTATGTGTTTTGTGTTCTGTTTTTCCCTTTTGGGATATTGATCTGTAAAGAAAACAAAGAAATAAAATAACAGTTGACACTTTCAATCAAAAAGATTGCAGTTCCATAGAAGTTCAGAATTTTTAATAAAGATTGACTTTCAGGGGATATGATGAACGCAAATCTCGGGGGATACAAAAAAAATCGTTAAAGACAAGTTAATCAAAGTGTTTACTACTATTAATGACATCCTTATGTAAGCCAGAATTCAAGATATGCTGATGCTAAGATATACGCTACAATAACACAGTGGTCAGTTGCACTTCATCAATTAACAAAAAGGATTGAAATTGCTGTAGGTTTAAGCGAATACGGAAATCAGTATCATTTGTTTCATCTAACCGTATTTAAGGATTAAAATGTACACCCAGCCCAAAAAAAACATAACAGTCACCAACCACCCAAATAATAAAAAG

mRNA sequence

ATGCATTGGGAAGACATATACGCTCAAGCTCAAAGTCAACAAGAAAGGATACATACAAGAGCTGAGATACTAAAAGAAATAAAAAAGGAGGGCCAGTCAAACAAAAAATACAAAATCAATAGTTATACAACAACACCATCACAACAACAAAGGATATACCCACAACAAGCACAACCCCAACTACAAACCAAGACCCAACCCAGCTAACGGACGACGGACCAAACTCCTGAAATATGAGCCAACTTGGTCTTGTGCATTACATGGGTTCTTCCTATAAAGGGGATACTACTCCGTACTTTTTTATATTTTAAAACAATGTTAAGAGGTGTACATTTATGTGTTTTGTGTTCTGTTTTTCCCTTTTGGGATATTGATCTGTAAAGAAAACAAAGAAATAAAATAACAGTTGACACTTTCAATCAAAAAGATTGCAGTTCCATAGAAGTTCAGAATTTTTAATAAAGATTGACTTTCAGGGGATATGATGAACGCAAATCTCGGGGGATACAAAAAAAATCGTTAAAGACAAGTTAATCAAAGTGTTTACTACTATTAATGACATCCTTATGTAAGCCAGAATTCAAGATATGCTGATGCTAAGATATACGCTACAATAACACAGTGGTCAGTTGCACTTCATCAATTAACAAAAAGGATTGAAATTGCTGTAGGTTTAAGCGAATACGGAAATCAGTATCATTTGTTTCATCTAACCGTATTTAAGGATTAAAATGTACACCCAGCCCAAAAAAAACATAACAGTCACCAACCACCCAAATAATAAAAAG

Coding sequence (CDS)

ATGCATTGGGAAGACATATACGCTCAAGCTCAAAGTCAACAAGAAAGGATACATACAAGAGCTGAGATACTAAAAGAAATAAAAAAGGAGGGCCAGTCAAACAAAAAATACAAAATCAATAGTTATACAACAACACCATCACAACAACAAAGGATATACCCACAACAAGCACAACCCCAACTACAAACCAAGACCCAACCCAGCTAA

Protein sequence

MHWEDIYAQAQSQQERIHTRAEILKEIKKEGQSNKKYKINSYTTTPSQQQRIYPQQAQPQLQTKTQPS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09625.1Spo09625.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo09625.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09625.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09625.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09625.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0042742 defense response to bacterium
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0042793 plastid transcription
biological_process GO:0006364 rRNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009414 response to water deprivation
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009407 toxin catabolic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006457 protein folding
biological_process GO:0009658 chloroplast organization
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009987 cellular process
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005634 nucleus
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005840 ribosome
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005622 intracellular
cellular_component GO:0005768 endosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005802 trans-Golgi network
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0043621 protein self-association
molecular_function GO:0004602 glutathione peroxidase activity
RNA-Seq Expression