Spo09700 (gene)

Overview
NameSpo09700
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 85936466 .. 85938013 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGAGGAGCACATGTAAGATCGGATATCTCTCTTCCAATTTCCTTGCTTGAAATTTATATCCCAACCCATATTTTTCTGGTATTTTCCTTAATCTTCTCGAACTTTTAATCGAAAGTAAAATCCCTTGTATTTCCCCTCTTTCTCCGTCTTTCAAATATTAATTTTCTAGGGTTTTAGGTAGTTGTCTCAGGTTGATTTTAGTTGTTTCATATTCTAGGTTTAGGTGTTTGTAATTTTTGTTTACGTTACTTATTGGGTAAATTCACTACTCAAAGGAATCACATGGTAAAGATCTGCAAGTTCAAAACGGTTATGTGAGTTTGTTATAGAGAAGGTGTTTAATAAAGTGAGTTTAAGATTATTTGATAAGTAGATTAATTGTCATGTTTGGTATGAAGTTATTAGCTTTCTTAAATGATAGCGTGTTTGATAATACTTTGGTTAGGGTATCTTTGGGCTTATTAGACTGATGGTGTGTTTATCTTGGAATATTTTGGGTTAGGATATATCTGGTTGTACAAGAGTTTGACAGCGTATTGATATTATGATTTAGTTTCTTGGTTTACTGGTAAAGTTAGGAATACTACCTCTATTTCATCTATAGTGTTGTTGTTCTAGTATGGTTTATAAGCTACTTTTTAGTTTTAGGATGTTGCTTCAGATGAGGTGCATGTTTGATATGCCTCTTGTCTATATATTTGTCTATCTGATTATGTTTCTATGTATGTTCGATATGCTAATCTTTTCACCAGTAGTTGATTTAAATTGGTTTCGGATTTGTTTGATTATGTTTTAGTTTATTCATACTCAAGACAATATATTTGTCCTGTGTCTTCAAAATGGGTAGTGTAGAAAGTTCTTTCAATTTTATTTTCTGGCCAGACACTATGCTGCAACGGCAATTGTACTGAGATAGTGATGATCTGGCTTTGTAGCTTATAGTTATTGTAATCGCGTTGTCTATCATTTTCAGTCTACAATAAGGTTTATGACACCTCCATTTTCACCTAGTGCAATCAAATTGTTTTTTTAGTGATCATATCTAGCTTCTACTCACCCTTGCTGATTAGGAAAATAATTCACTACATGTATGTTTATCAAGTTAGTCATCCATGGTTTGAAGATTTAATCTTTTAGTAGTAGCCATGAATCCCTGCTCTTTATCTTGTGCTTTTAACAGGGCAATAGTTTTTGTTACACCCATCATATAGAAAATAGCATTTTGCAAGATATTATACCCTGATATTTTATTTTGTGCTTTTAACATGGCTTTTTTTTTTGTTATTTATTTCAAGTATGCACAAATCAGTGTTGGTTCCAGAGAGTACTTCAGCTAGCATTCTACCATGTTTGTTATAATTTTACGGGGTCATTTGGAATCACATAAATGAGGTTCTGTTTAGAAATGTTGCTGCAAACCCAGCTAGTGTCTTGCGGAAAATTGATGGCTACATAACTGCGAATGAGGAAAGCTTGACAACCTCGTACCAACTTTGGAAGTATCTAAGAGGTAGGAATTTTCAACGTCAGGCTTATGAATGA

mRNA sequence

ATGGGTGGAGGAGCACATGTAAGATCGGATATCTCTCTTCCAATTTCCTTGCTTGAAATTTATATCCCAACCCATATTTTTCTGGTTCTGTTTAGAAATGTTGCTGCAAACCCAGCTAGTGTCTTGCGGAAAATTGATGGCTACATAACTGCGAATGAGGAAAGCTTGACAACCTCGTACCAACTTTGGAAGTATCTAAGAGGTAGGAATTTTCAACGTCAGGCTTATGAATGA

Coding sequence (CDS)

ATGGGTGGAGGAGCACATGTAAGATCGGATATCTCTCTTCCAATTTCCTTGCTTGAAATTTATATCCCAACCCATATTTTTCTGGTTCTGTTTAGAAATGTTGCTGCAAACCCAGCTAGTGTCTTGCGGAAAATTGATGGCTACATAACTGCGAATGAGGAAAGCTTGACAACCTCGTACCAACTTTGGAAGTATCTAAGAGGTAGGAATTTTCAACGTCAGGCTTATGAATGA

Protein sequence

MGGGAHVRSDISLPISLLEIYIPTHIFLVLFRNVAANPASVLRKIDGYITANEESLTTSYQLWKYLRGRNFQRQAYE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09700.1Spo09700.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo09700.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09700.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09700.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09700.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006474 N-terminal protein amino acid acetylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0031248 protein acetyltransferase complex
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo096990.73Barchart | Table
Spo056210.68Barchart | Table