Spo09753 (gene) | SpinachBase

Overview


Name	Spo09753
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	ATP synthase subunit epsilon, mitochondrial
Location	chr6 : 42990441 .. 43001495 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCGAAGGTGGAAGGAAGACGAAGAAGAATAAGAAGTGTGTGCAAAAAGGATGAGAGAGAAAGTTAGGGTTAGGGTTTGGTGGAAGGAGAATAATAAAATTGGGGAAGATGAAAAGAGAGGAGGATGGTGGTGGTGGTGTGAGACGTCATGAGAACTGAGGGAAAGCGTGAGCGTGAGTGGGGTTGGATTTGTGTGAGCTCGATGAAATTGAGGTGAGGTTGGTCATGCGATACTCACGTGCTCAAAGCCATTTTTTGTTTGTACTTTTTTTTGTTAAAATTTCTAATTTATTTTTGAATTAAAATAATCGAGTGTCACGTAGATAATTAATTAGGTTTTACATAGATATTTTAATTAATTACGGAGTAATTATTAATATATACAACACCATCCAAAATTAATCAGGCACTCTAATAATTAAAACATAAATCTAAAATAAAATTGAATCCAAAATCAAACACTAATCTAAAATAAAATTCAAATCCAAAATCAAAAACTAATCTAAAATAAAAATCCAACATCAAACAATAATCCAATATTATAGCGCCATGTAGGAAATCTAATGGTTTTGACGAATGAAAAATAAGATTTCAAAATTATTTATGAATTAAAAAAGTCGAGTGCCACGTAGATAAATAATTATGTGACATGTAGATTATTAATTACGAATATTACGTATATAGAATTCCATCCAAAATCAACCACTCTAACAATTAAAAAAATAAATCTAAAATAAATTCAATCCAACATCAAACACTTATCTAAAATAAAATATATAACAGTTTTATTTTAACTTAACAATTTAATAGAATTCGTGTATCGCACGGGCTAAATTCTAGTAATAAGAATACGAGATTTTACCCTAAACTTATAAGTTATCACCTTGTAAAACAACCGTAACTCATAAGAGAGGATATCCATAAGCATACAGTTTACAATCTTCTGGTCTCAAGAGAACAAACTTAGAATTGAGTAGATTTTATAGAACAAAATTATAAGTGACTAGATCGATTTTGTCACTACTAAGCTAGGCCTTACTACGTACTCCCTCGGTTTTTTTTTGTTCTTTAAATTTTCCTTTTTAATTAGGTGTTTCAAAATATTTTTTACACTTCCTTTTATATTATCACATAAATATTTTAATATTCTATCAAAATTTATGTCCAATGATTATTTTAACCAATTAAATTCATTGAATCATTTAATCTTTCACACTTTTCTATTGAGACATTAATTTTTTTTCATTTTCCCAGACTTTTGATAAAAGTGAAAACATTATAAATAAACGTAATTTGCCTTTTTTTTTAAAAAAAAAAAGAGAAATCTTAATGTACATTAATTAGTCGTTAATAAACGCGTAAAAAGCCAAACGTAACGAACAAAAAAAAACGGAGGGAATAGTTGGTAAGAGTTTTTTTTGGAGAAAATAGAGATTTTTAATTATGCAATTTGATTAGCTTGTTGACTTATTTCAAAGCTTTTTTAAAAGTTTTTTGTGAGTTAAGCTAATAAATGGGGTCTAACCTTTTGAACTTTTCACCGTTTAGGACCTATATTTTTTTTTTTCACCGTTTGAGACCTCATTCCCCTTTTCCGGCCAAATTTAACTAGAGTACATTAAAAGGTTAGGTCCTTTGGTTAAAAGGTTAAAGTAAATCAAAAGTTTGAGAACTAACCTTTTCGTTTTTTCACCTTTCAGGACCTGAACTTTCTTTTTTCACCATTTGAGACCTCATTCAAGTTTTCATGTAATTCCAATTCAATTATTAAAGTTTCTAACCATTAACATATAATAAGCTCAAATTAAAATAATATGTAACGTAATTCATAAACTGAGCTCATATATAAATTGATTTGGGTATCAAATAATCTAATGAATAAAGAAGCAAATAATTATTTACAAGCTAATCATATTTTATATATTCGGTTATGGTGTCCAATGACAATAGAAGAATTAAGCAATTTATATAGTAGAGTACGATATTAATACAATTATACTCAAAGGTTTACGGGGATGGTGGAACTTAAAATACACTACGGAATTTTCCGCCCGGGACCCAAGTTGTTAGGAAGATCTGCCATTGATGGTATATCCTCACAATTGTTTGTGGTTTGTTTGAAGAATATTAATAATGTCCACAGAAAAACGTAAAATTAATAAAAAAAAAGGTTAATTTTAAACGAATTTTGATTTTGATCACAAGTTAATATATCATACTAGTTCTTGATTGTTTTATGAGAGTAAAGACAATTGGTTTATTGATGCTCATATTTGATGAGGTACTTAAATGATTCATGCTTAACTCGATCAAAATTAATTAGCAATCTCCGAATTAAAATTTACGACCTCAAATTTTCTATAAACATATTCAAATAAGTTGTTATTGGATTACGTAAATTAAGTTTCAACAATTAAAGGTCTTATGAATGAGTAAAGTTTATCTACGATGTTTGGAGAAGAGTACTATGTAGTTTTAATTGTATGATGGGGTTTGGGAAAGATGAATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTAAATATATTAATAACAATTACTGTATTGCATAAAAATTAATAACAATAAAAATATTAATAACTATTATTATAATTATTAATTTGAGCGCTAACTTCTTCTTTTTTTTTTGGCATTTTCTGATTTTTTTTTTAAGTAAATAACGTTGGTATACAAAAAATGGATATGAGGTCCCAAAAGGTGAAAAAAAATATTCGGGTCCTAAACGGTGAAAAAATTAAAAAGTTGGACCCTAACCTTTGTCTTAATTTATTATTTGAGTGATAGTATGGTTAACGGTGAGTTAAACTACGGTTAACTGGCCGGAAAATGAATATGAGTCCCCAAAAGGTGAAAAAAAAAGGTTGAGGTCCTTAAGGGTGAAAAATCCAAAAGGTTAGACCCCAACCTTTAGCTTAACTCAGTTTTTTGTGGTCCAAAACGTTCTCCGAGATAAAGCACATACGAGGAGCTTCTTTGAAAGAGTTGACTAAAGCAACAATAATAATTTACCACACACTTTTCCGCAAACATCTAAATTACTACGTAAAACCTCGTTAACCAAACCAAATAATGCAATACATTAGTCAAACCAGTTAATACAACCAACTAACATATACACCTACATACTTAACCAAACATATACTTTCTATAATAACTCAATCTCCTTATCCTTATATAGGGCCTGGAAATGTCCCTTGTTCCACTTGCTCGTTCCATCTTTGTATCTGCAAATGCACAAACACAACTCAAATGATTCAATTCTTAGTAAATAGAAAATAGAAAATAGAAAATAGAAAAGTAGGAAGCAGTAAAGGCCCGTGCGACACCGTTTTTTTTATTTCCAGTTTATTTATTTATTTAGAAAACTAAAAACAAAAACATAAAAAACACAAAAGACAGCTCCCAATTTTTATTGCAAGTTTTGAAAATCAATATGCTTACTCTAGATATTACTTTTTGTTACTTCAAGATTCAAACTAAAGAAATTGAGCGATTTCCTTCAATATTGCATAAAGATCCAACAATTCCCTAAATACGTTACTTTTTAAGTTATTTCCCACCATACCGTCCACGTAAGCAAGGGAGAAAGAGAAGTAATTTTTTTTTTCCGGTTCAGCATTAAACCGCTATATGAGATAGCGGTTTCGTTTTAAAGCAAACCGCCATCTCAGATGGCGGTTCAATGTTATAAACCGCTATCTCAGATAGCGGTTTGTATTAAAACAAAACCGTTATCTCAGATGGCGGTTTACTTAATTGTAAATTATTTTTAACATGAATTACAGTTTAAATAGAAATATAATTTAGAAGTAACCTCTTATGACATCAATTGTGTCTGTAGCTCAGTGGATAGAGTTGTGTTGTTTCTACGCAGGAGGTCGTGGGTTCGAATCCTACCTGATGTGTTTATTTCTTTTTAACCATTTATTAATATTAATTATAAACATTTCTAAATTTAACTTATCAACATTAGTGTCTGTAGCTCAGCGGATAGAGTGTTTATTTCCTAACCAAAAGGTCGTGGGTTCGACCCCTAGCTGATGCAGTTTTTTTTTTTAACCATTTATAAATAGTACTACCTACGTGATTATAAACCGCTATCTCAGGTAGCGGTTGACTTCAACCGCTACCTGAGATAGCGGTTTAGTGTCGCTTCGTTAAAAAACAAAAGGACCGGTTTTAATGCTGACGTGGACGGTATGGTGGGAATTAAGTTAAAAAGTGGCGCATTTTGGGAATTTGACGTTTTTTAAACAATATTGAAGGAAATCTGACAGTAATACCGATCAAACCCTTAGAAATTTAGATCATGTGCTCTTTACGTACCCATTCAAGAGGACATAACGATCTGTAATATCTAGCAAACTTCTCACATGCTGGATCATCTTTCCCCTTCTCTTTGATGCACCTGAATCAATACTTAACTTTAGTTATTATTTTGATCAACTCGTGATTTTGTTGTACATTTTTATATTAATTTAGAAAATACACTATTAATGCCTGTGATATTCGAGATAACGAGTGTAACAATGTCGTGTTTGGTTTTGAACTGGGAACCTCCAATCTCCTGGAGCGGTCTTTAGTTCAATCTCCACCTAAATTAAACTCATAATATCAGTCAAGAACCCCTAATAAAAATACAAATTAAACAAAATAGTAAGGAAAATAATATATTTTCTCCGTTCCGAAAATATCGCACCATGGTTGTCTTTTACTCCTCCAACCATTATTTTGACTCTTAATATCTCCAATCGTGCGCAATTGAAAATTATAAATAAATTAATATTTAGAAAATATACACTGATACGATAAATTTCCTTACGTACGAATCACAAAAATGGCCAAAGGCGTAGTGTGAATAGTGTAAAAAAAATGGTGCGATTTTTTCACGGAGGAAGTATTAGCAATACCTAAATACTCACTCCGTTCCATAAAGATTTTCTAATTTATACTTTTCACGTTTGCACAATTTGTATTATCTATATCTCTAATTATATATTAGATTTTGATATTATTAAAGTATTTATGGAGACAAATCAAACAAGACTACGGGCGTGTTCGGCGGTAGCTTTTGAGGTAGCGGGTAGCGTTTTGACCGAGTCAAGACGCTACTTGTAAAATTTGTAAGTATTTGGCGAGGTAGCGATTTAGGTAGCGGTTAGCGGTAGAGGTAGCGGTTGAGTAGCTTTTATCAAACGTTAAAATTAGTAGCGTTTAAGGTAGCGGGTAGCGTTTGACAAATTTATAATAAAGTTTTAAATAATATTTCACCTTTTATTTTATTTTATAATATCAACCGCTACTTTTACCGAACACTCATATCAGTTACCCGCTACCTTTGACCCGCTACTATTGACCGCTACCCGCTACTCCAACCGTTACCCGCTACTGAACCGCTACTGAACCGCTACCCGCTACTGAACCGCTACTTTTGCCGAACAGGGCCTACATATAAATATTTTTTAAAATATGTATTTGAAATAATTTAAAAATTTCTTCAATGGTGAATAATGCCAAAATTTTAAATCAAAATCATTACTCCCCTGTCCCTTAATACTCGCACCGTTTTGACTTTTTGCAATATTCACATAATTCATTTTGGCCCTATTTTATTTCTATTATATGAAAACAAATGCTAGTATATACTCAGTAATATATGGTTGGCTTCATCTTAATATATATTTTCAAAATATTAATATTTTTATAAGTTTTTATAATCTGTAATTAAAGATATTGGTAGTCAAAGTCGTAAATTGGCAAGCATATTCAGTCAAAATGATGTGAATATTAAGGAACAAAGGGAGTATTATGGAATAGAAAGACTGAGTGCATAATACTCCCTCCAGTTTTTTTTCCAAACTTTAATTTTATGGTCAAACTTCATAAACTTTCATCATAATTCTCTTTATTTTTATTTTTTTTTGGTGTTAGCACCCTGTTAACCCTTAGGGCTAATCCGAATTCGAGGCGAGTTCTGGGTGGGTAGGTTTCGGTCCCCTCCCAATTGTTGTTGGGGGGATCGAACACGAGTTTTCCATATCAAGTCCAGTCTCAATCACCACTGAACCAATAGACAATTGATCGATATAATTCTCCTTATTATAAATATCAATATAATATGTTTGTGATATTTGTTGGATTTCGATCCATATGTATTTTCAAAATATCAATTTTTTACAAAAAAAAAATTTCACAGTAATATATAAATGCATATATCAATGATCAAACGTGTAATTGAAGACTAAGGTGTAAGTGTGTAACCATAAAAAAAGACAAAGAGGGTACGTAGATAACTAACATTAGGTTGAGGGACCTCATCCTCGTTACGGTAGGATTGATCAGGAGAAGAAGGAGGCGGTGAAACGGTGCCGTATTCATGAGCAGGATCAGGAGCTTGTTTACCGGTGATGACTTCTGATAATGTTAAGTTATCGCCTTGTACTACGTCGTTTTGATTCATCTCTCTTACAACCTACCTACAAGAGAAACCAAGTTAAGTATGAATGAATATATGTGCAGTGATAATTAAGTGATATGAGTAATATGAATTTATGTATGCAGTATGCGTCACCATGTGTGATGTAATAAGGTGTAGGAGAAAGGCAGGTGGAAGGCAAAGGGCAGACACTTGTCCACCTTAAGGAGGGTTTTGGGTATGTTGAAGTCGAACAAGGTTAGTCCACGTTTATTCTTTATAAAAAAAAAAGAAAAAAAAGATATACTCCGTACTAGATATCAATGAATAAGATGCGTGCTTTGATTTTAAAAGTATGTGCAATAATTAACTATTTTAAATTCTGAAAAAGTAAGCATATTGTAGATATTTTAAGTAAACACTATGAGTTGACTTATATTCTGTAAGTATAGACAAATACTCTATCTGTTCATTATAGTCATACCAGACTACTATTCATATATGTTTAGTACGTACAAAGTATTTCGTAATGTTTCCCACTCAAAAACTCTAATCCCGATCTAATATTTCTCATACATGTGTCTAAATATGGTTAAAGTCGCGCAAATGTTCTTAGCCTGTCCCATGGAGATCTTACTGCATGGCGCAAAAGGATAGTCCACACAAAACCCGAACCCATGTGTCCCCTTTGCGTTTCTTGTCATGCTTATGTACCTTAGCCGCCTTATTTCACCTAATGTACCGTGCATTGTCATATTGAGTCATGTTGTGCTTTTCTATAAAAAAAAATGCGGCTTTCCTTCAAAAAAAAAAATGCGGCTCAAGCATGTCTAACGACCTTCGTCTTGATGCCTGGGCCGTGTTTTTTCCTCATGTCATGCCGTGCCTTACTTTTTGTTGTGCCACAAGCGGACTCGTTATGGTGCCATCTTTACCATCCTCATTTTTGTTTGTTTGTATCGTACCCGTATCCATATCCGTACCCGCAACCAAAAGTAAAAGATTTCAATAGAGCCTTGATACAATTCTTAAACCCATCTTTCTTAGTTGGGCCGTGTATCAGTATTTCAAGGTGAGAAGTCCAACTATTAGGAAACACAAAAACAAAACCATCATAAAATTATCAACACCAATTTGCATCTACCAGAAAAAAATCTAGGTCTTTTTGCACAGAGCTCCCATTTCCAGAAAAACGAACACGAGAAAGAAGAGAGAGAAGAATCGAAGATGAGTAGCAGCGCAGCAGTACCATTCTGGAGGGCAGCTGGTATGACATACATTAGCTACTCTAACATCTGCGCTAATCTGGTCAGAAATTGTCTCAAGGAGCCCTTCAAATCTGAAGCTATTGCTAGGGAGAAGGTTCATTACTCTTTGGCCAAATTCGAGAATGGAAAATCCCTCAAACCAAGTATTCTTTCTTTCCTTTCCGTTTTTCGGGTTCTTTTAATTCCTTATTTGTTGTTCTTGATTTCCCCCAATTTTATTGGGGCCATCTGATTTTGATTCAATTGATCGAGATCTAGGTTTTCTGGGTTTTTGATTTTTTGGTTTAATATGGTTTAATATGGTTTACATTATGCTTCATATGGTTGTCTCCAACGATATGCGGTCAACTTACCCTTTTTGCCCATTTTCAACAAAGTACTCCGATTTGTTTATTTTTTATAGGATTGTTTGATCATTGCAGTGGGTTTCTCAAACTCCTATAATTGATCTAGTATCGATCTGTATGAACTTGTTTTGTTGATTGTTGGTTATATTGAGAAATGGTGTTCACATTGTTGCCCCCTTTCCTGGGAAATCATAGCTTTGATGCATATTAGGTCATAGTTGATCTATTTTCATGTGAATCGAATACCCCTTTCCTCGTTCACACTGCTCCTCAATACATGGTTTTTAAGACTTGTCAATCATAAATTGTAACTGATTGTAAAACCATTTGTTAATCAGAAAAACATTCGTGTAGAGAGAATGAATTCATTATTTAGGGGGCGTTTGGTTCATCTTAGGTATGAGGTATGGGGTTAGATATCAAACCCATGGGTTTGGAATGAGTTATACCTGGAAACCCATACCTTGATTCATGTGTTTGGTTGCCAAAGCCGAAAGTAAAACTATTTATTTAACAGTAAAAGAAATTAAAATACTCCTCCATCCCTCGAGTCTGCTAATCTGCTATCTTCTTCGAAGTTGAAGAATGGACACCAAAGTTCCTGCCCACATCATAATAATTAATGAAAGCAAAATTCTCAGAATTCATTGACAATGTAACATAGGATTTCGTAATTCTTCAATTAATACTCAAATTTTAGTTGTAATTTGTTTGATTTTATCCACTGGATTTCTTAATCTGGAACTTTAATGGCACAAAAGAATAATTTAATATCTACAGTATACGTAAAGTTTAAAGAAAAAGATAAGAAAAATCTTTGTTTTTTTTTCTTGTTCGGGAGTTGCTGGCTTGAGATAATGGTGGTGTCGATTGGTTGTCTGGACTATGGAGACGATCGGGTTTGGTGTTGGAGATGAAGGAATGGTGAACTGGCACACACTCTCATAGAGTCGCAGTAATGGTATACGTGAAAAACTGAAAAACATATGGTGCAGTGTTATTTTTTTTTTGTTGATGATTCCAGAAGTGGGGGTTTCCTCCAAACCCACCCCTCCTGGATATGAGAACCCGATACCTTGGGGGTATGAAAGGTGGGACCCATGGGTATGAAAATTAAAAAATATATGAACCAAACATAGGGTATTGGTATGGATGATTACAAACCTATACCAAACCCATACCTTGCAGCGAACCAAACACCCCCTTGTTAGCTTAGTACATATATAAGGAAGAAGCAGAAAATTGAAAGATTTTGTGTGGATTAGAGGCAAGTATATTGGGGTAGTTGGGTATCAGTTTAATCCATCTAGCAAAGAATTGGACTGCATTGCAGGAGTATAAGAAGTTTATAGTGACCTAGAGTTTTGTGATTGGTTGGTGGGTTTGAAGTGTAATTGTGTAAAGCTGGGATATCTTATTTAAAGAACTATATTATTTGGAACCTTGGAAGGATATAGGATGAATCAGCATACTTCACAACTTGGGGATGGTGATGACTTTCTCTTTTGGTGGTATTGCCTGAACAGGATTTGATCTAATTTCATGTGCATCAACTGTTGATGTTCTAGATTTCCCGTTCGGAGGCGTCTAGATGAAGTATTTGGAGCTGGAGGGATGAAGGAAAGCATTGGGATGAGGCTTAATTTGATTAGACTTGCTATTGATTAGTCATTTAAGTTTCTGCCTTGTAGGCTCCTCTATCCTTTCTTGTCATTTGTCATAGATTTTACTAATGCAGGCAATAATAGAAAATTTAAGAGGTGCTTACTAGTTGAGGTACCTTTCATTTGTTTGGCTGATAATTTGAATATTTGATGTTTAGCAGCAGAGACTGAGGTGCTGGTATTGTTGCACTTGCCGTCTCTGGCTAAACTTTACCTTTGTAGGGTTTCGTGTCTGTTGTATTATGTAGGGGTGTGTAGCTAATTGGTTAGTGGAGTGCCTATTTACTGAGAGGTTGCTATTGTGCTAGTTCATAGTGGCAGGTGTAATTATTTAAGGGGTAATGAAGGCTATAATAACTTATTAAGAGGTGATGACGGGGTTGAGGTTGTGGTGGTTAAGGGAGGAGTAAAAGACGAGGGACCTATACCTATTACCCTCATCTTTGGGGTGATAGGGGGGAATGGAGGAAATTTTACCCTCGTTTGAAATGTAACATTCACCCAACTCCTTCCTCAACTTTTAATCACCACCACTTCTCTCTTTTCTTATTATCACTCCTATTAACCACTTCTCTATTCTCTTATTATCACTCCTATTAACCTCCATTTCTCTCTTTTCTTATTATCACTCCTGTTAACCTCCACTTCTCTAGTTCTCTCTTTTCTTACTATGACTCCTATTAAATTCATCCCTATCTTTCCAAGCAATCCTCTATTAACATACTTTATTTACTTGTCTTGACCAAATGATCAGTTTAAAACGAATTTTGGCTCCAGATACCTACCTTGTGTATCGTCTGATTCTTGTGTTTGAATTCTCTTGTCTCTTGTATGCTTTCCCAAATTTTGCCTTGGATGTCGACACATAATACAATGCTGTTACAATGTTTTTGAGTATAGACTAAATAATTAGGTCTCTTATGTTGCTTCTTACTAATATGCAGTATTTGCTATGCTCACTAATTGTTGTTCTCTTTTGTCTGGCAGCCGTCCGATCTAATGATCAGGAATAAGGAGGTCTTAACCATGAAGCCTTCTGATACTTCCACCATAATCATGCTCTCCAAATGTCATTCTATTTTTTGCTAGTGTTATACATTGAGGTTGTAATGCCCAGATAATGTGATAACTGCATTGTGAGCTTTGGTTGTTATGATAATAATGTTTTAACTTTCAATCATCTTGAAAAATGACAAATTGACAAGTCAATTTCAGATAATCTTTTCCCAGCTTGGTGTTTGTCTATATTAATATTAATGTTTGGCATGATTATGAATACTATTAGCAATGTTTCAAGCTTTGTGCTATATGCACCGCTTCAAA

mRNA sequence

ATGGGAATCGAAGGTGGAAGGAAGACGAAGAAGAATAAGAAGTGAGAAAGGCAGGTGGAAGGCAAAGGGCAGACACTTGTCCACCTTAAGGAGGGTTTTGGGTATGTTGAAGTCGAACAAGAAAAAAATCTAGGTCTTTTTGCACAGAGCTCCCATTTCCAGAAAAACGAACACGAGAAAGAAGAGAGAGAAGAATCGAAGATGAGTAGCAGCGCAGCAGTACCATTCTGGAGGGCAGCTGGTATGACATACATTAGCTACTCTAACATCTGCGCTAATCTGGTCAGAAATTGTCTCAAGGAGCCCTTCAAATCTGAAGCTATTGCTAGGGAGAAGGTTCATTACTCTTTGGCCAAATTCGAGAATGGAAAATCCCTCAAACCAACCGTCCGATCTAATGATCAGGAATAAGGAGGTCTTAACCATGAAGCCTTCTGATACTTCCACCATAATCATGCTCTCCAAATGTCATTCTATTTTTTGCTAGTGTTATACATTGAGGTTGTAATGCCCAGATAATGTGATAACTGCATTGTGAGCTTTGGTTGTTATGATAATAATGTTTTAACTTTCAATCATCTTGAAAAATGACAAATTGACAAGTCAATTTCAGATAATCTTTTCCCAGCTTGGTGTTTGTCTATATTAATATTAATGTTTGGCATGATTATGAATACTATTAGCAATGTTTCAAGCTTTGTGCTATATGCACCGCTTCAAA

Coding sequence (CDS)

ATGAGTAGCAGCGCAGCAGTACCATTCTGGAGGGCAGCTGGTATGACATACATTAGCTACTCTAACATCTGCGCTAATCTGGTCAGAAATTGTCTCAAGGAGCCCTTCAAATCTGAAGCTATTGCTAGGGAGAAGGTTCATTACTCTTTGGCCAAATTCGAGAATGGAAAATCCCTCAAACCAACCGTCCGATCTAATGATCAGGAATAA

Protein sequence

MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLKPTVRSNDQE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo09753.1	Spo09753.1	mRNA

Homology

[Close]

BLAST of Spo09753.1 vs. NCBI nr
Match: gi|902230324|gb|KNA21812.1| (hypothetical protein SOVF_039850 [Spinacia oleracea])

HSP 1 Score: 140.6 bits (353), Expect = 1.000e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK
Sbjct: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60

Query: 61 PTVRSNDQE 70
          PTVRSNDQE
Sbjct: 61 PTVRSNDQE 69

[Close]

BLAST of Spo09753.1 vs. NCBI nr
Match: gi|731332454|ref|XP_010677215.1| (PREDICTED: ATP synthase subunit epsilon, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 127.9 bits (320), Expect = 7.000e-27
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEA+AREKVHYS++KFENGK  K
Sbjct: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEALAREKVHYSISKFENGKPQK 60

Query: 61 PTVRSNDQE 70
          PT+RS+D +
Sbjct: 61 PTIRSDDAQ 69

[Close]

BLAST of Spo09753.1 vs. NCBI nr
Match: gi|802639536|ref|XP_012078426.1| (PREDICTED: ATP synthase subunit epsilon, mitochondrial [Jatropha curcas])

HSP 1 Score: 112.5 bits (280), Expect = 3.000e-22
Identity = 51/69 (73.91%), Postives = 63/69 (91.30%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          M+S+AAVPFWRAAGMTYI+YSNICANLVRNCLKEP+KSE +AREKVH+S++K+ +GK  K
Sbjct: 1  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKSEVLAREKVHFSISKWTDGKPQK 60

Query: 61 PTVRSNDQE 70
          PT+RS+  E
Sbjct: 61 PTIRSDTPE 69

[Close]

BLAST of Spo09753.1 vs. NCBI nr
Match: gi|568878061|ref|XP_006492024.1| (PREDICTED: ATP synthase subunit epsilon, mitochondrial [Citrus sinensis])

HSP 1 Score: 112.5 bits (280), Expect = 3.000e-22
Identity = 51/69 (73.91%), Postives = 63/69 (91.30%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          M+S+AAVPFWRAAGMTYISYSNICANLVRNCLKEP+K+EA+ REKVH+S++K+ +GK  K
Sbjct: 1  MASNAAVPFWRAAGMTYISYSNICANLVRNCLKEPYKTEALTREKVHFSISKWTDGKPQK 60

Query: 61 PTVRSNDQE 70
          PT+RS+  E
Sbjct: 61 PTIRSDTPE 69

[Close]

BLAST of Spo09753.1 vs. NCBI nr
Match: gi|225443282|ref|XP_002274249.1| (PREDICTED: ATP synthase subunit epsilon, mitochondrial [Vitis vinifera])

HSP 1 Score: 112.1 bits (279), Expect = 4.000e-22
Identity = 51/69 (73.91%), Postives = 61/69 (88.41%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          + S AAVPFWRAAGMTYISYSNICAN+VRNCLKEPFKSEA+ REKVH+S++K++NG   K
Sbjct: 5  VGSGAAVPFWRAAGMTYISYSNICANMVRNCLKEPFKSEALTREKVHFSISKWDNGVPQK 64

Query: 61 PTVRSNDQE 70
          PT+RS+  E
Sbjct: 65 PTIRSDTPE 73

[Close]

BLAST of Spo09753.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSM6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_039850 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 7.200e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK
Sbjct: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60

Query: 61 PTVRSNDQE 70
          PTVRSNDQE
Sbjct: 61 PTVRSNDQE 69

[Close]

BLAST of Spo09753.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CI46_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g105720 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.900e-27
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEA+AREKVHYS++KFENGK  K
Sbjct: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEALAREKVHYSISKFENGKPQK 60

Query: 61 PTVRSNDQE 70
          PT+RS+D +
Sbjct: 61 PTIRSDDAQ 69

[Close]

BLAST of Spo09753.1 vs. UniProtKB/TrEMBL
Match: A0A067E3V1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035233mg PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.100e-22
Identity = 51/69 (73.91%), Postives = 63/69 (91.30%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          M+S+AAVPFWRAAGMTYISYSNICANLVRNCLKEP+K+EA+ REKVH+S++K+ +GK  K
Sbjct: 1  MASNAAVPFWRAAGMTYISYSNICANLVRNCLKEPYKTEALTREKVHFSISKWTDGKPQK 60

Query: 61 PTVRSNDQE 70
          PT+RS+  E
Sbjct: 61 PTIRSDTPE 69

[Close]

BLAST of Spo09753.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QMF8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G063900 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.600e-22
Identity = 50/69 (72.46%), Postives = 64/69 (92.75%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          M+S+AAVPFWRAAGMTYI+YSNICANLVRNCLKEP+K+EA++REKVH+S++K+ +GK  K
Sbjct: 1  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEALSREKVHFSISKWTDGKPEK 60

Query: 61 PTVRSNDQE 70
          PT+RS+  E
Sbjct: 61 PTIRSDSPE 69

[Close]

BLAST of Spo09753.1 vs. UniProtKB/TrEMBL
Match: C6GFP6_GOSHI (ATP synthase epsilon subunit 1 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.600e-22
Identity = 50/69 (72.46%), Postives = 64/69 (92.75%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          M+S+AAVPFWRAAGMTYI+YSNICANLVRNCLKEP+K+EA++REKVH+S++K+ +GK  K
Sbjct: 1  MTSNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEALSREKVHFSISKWTDGKPEK 60

Query: 61 PTVRSNDQE 70
          PT+RS+  E
Sbjct: 61 PTIRSDSPE 69

[Close]

BLAST of Spo09753.1 vs. ExPASy Swiss-Prot
Match: ATP5E_ARATH (ATP synthase subunit epsilon, mitochondrial OS=Arabidopsis thaliana GN=At1g51650 PE=1 SV=3)

HSP 1 Score: 108.2 bits (269), Expect = 3.600e-23
Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          M+S+AAVPFWRAAGMTYISYSNICAN+VRNCLKEP K+EA+ REKVH+SL+K+ +GK  K
Sbjct: 1  MASNAAVPFWRAAGMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKWADGKPQK 60

Query: 61 PTVRSNDQE 70
          P +RS+  E
Sbjct: 61 PVLRSDTPE 69

[Close]

BLAST of Spo09753.1 vs. ExPASy Swiss-Prot
Match: ATP5E_IPOBA (ATP synthase subunit epsilon, mitochondrial OS=Ipomoea batatas PE=1 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 2.300e-22
Identity = 46/69 (66.67%), Postives = 62/69 (89.86%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          M+S+AAVPFWRAAGMTYI+YSN+CAN+VRNCLKEP+++EA++REKVH+S +K+ +GK  K
Sbjct: 1  MASNAAVPFWRAAGMTYITYSNLCANMVRNCLKEPYRAEALSREKVHFSFSKWVDGKPQK 60

Query: 61 PTVRSNDQE 70
          P +RS+  E
Sbjct: 61 PAIRSDTGE 69

[Close]

BLAST of Spo09753.1 vs. ExPASy Swiss-Prot
Match: ATP5E_MAIZE (ATP synthase subunit epsilon, mitochondrial OS=Zea mays PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.000e-22
Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 1


		  
Query: 2  SSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLKP 61
          +++AAVPFWRAAGMTYI YSNICA LVRNCLKEPFKSEA +REKVH+S++K+ +GK  KP
Sbjct: 3  ATTAAVPFWRAAGMTYIGYSNICAALVRNCLKEPFKSEAASREKVHFSISKWTDGKQEKP 62

Query: 62 TVRSNDQE 70
          TVR+   +
Sbjct: 63 TVRTESDD 70

[Close]

BLAST of Spo09753.1 vs. ExPASy Swiss-Prot
Match: ATP5E_DICDI (ATP synthase subunit epsilon, mitochondrial OS=Dictyostelium discoideum GN=atp5e PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.000e-9
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 1


		  
Query: 9  FWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLKPTVRSND 68
          +WRAAG+TY+ Y+NIC   VRNCLKEPF++ A  RE    +   ++NGK     + +++
Sbjct: 5  YWRAAGITYLQYANICGTHVRNCLKEPFRAAAKNREGFISNTVMYQNGKESSTIILNSE 63

[Close]

BLAST of Spo09753.1 vs. TAIR (Arabidopsis)
Match: AT1G51650.1 (ATP synthase epsilon chain, mitochondrial)

HSP 1 Score: 108.2 bits (269), Expect = 2.000e-24
Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = 1


		  
Query: 1  MSSSAAVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSLK 60
          M+S+AAVPFWRAAGMTYISYSNICAN+VRNCLKEP K+EA+ REKVH+SL+K+ +GK  K
Sbjct: 1  MASNAAVPFWRAAGMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKWADGKPQK 60

Query: 61 PTVRSNDQE 70
          P +RS+  E
Sbjct: 61 PVLRSDTPE 69

The following BLAST results are available for this feature:

BLAST of Spo09753.1 vs. NCBI nr
BLAST of Spo09753.1 vs. UniProtKB/TrEMBL
BLAST of Spo09753.1 vs. ExPASy Swiss-Prot
BLAST of Spo09753.1 vs. TAIR (Arabidopsis)

BLAST of Spo09753.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230324\|gb\|KNA21812.1\|	1.0e-30	100.	hypothetical protein SOVF_0398...	[more]
gi\|731332454\|ref\|XP_010677215.1\|	7.0e-27	86.9	PREDICTED: ATP synthase subuni...	[more]
gi\|802639536\|ref\|XP_012078426.1\|	3.0e-22	73.9	PREDICTED: ATP synthase subuni...	[more]
gi\|568878061\|ref\|XP_006492024.1\|	3.0e-22	73.9	PREDICTED: ATP synthase subuni...	[more]
gi\|225443282\|ref\|XP_002274249.1\|	4.0e-22	73.9	PREDICTED: ATP synthase subuni...	[more]

BLAST of Spo09753.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RSM6_SPIOL	7.2e-31	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CI46_BETVU	4.9e-27	86.9	Uncharacterized protein OS=Bet...	[more]
A0A067E3V1_CITSI	2.1e-22	73.9	Uncharacterized protein OS=Cit...	[more]
A0A0D2QMF8_GOSRA	3.6e-22	72.4	Uncharacterized protein OS=Gos...	[more]
C6GFP6_GOSHI	3.6e-22	72.4	ATP synthase epsilon subunit 1...	[more]

BLAST of Spo09753.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4


Match Name	E-value	Identity	Description
ATP5E_ARATH	3.6e-23	72.4	ATP synthase subunit epsilon, ...	[more]
ATP5E_IPOBA	2.3e-22	66.6	ATP synthase subunit epsilon, ...	[more]
ATP5E_MAIZE	4.0e-22	70.5	ATP synthase subunit epsilon, ...	[more]
ATP5E_DICDI	5.0e-9	44.0	ATP synthase subunit epsilon, ...	[more]

BLAST of Spo09753.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G51650.1	2.0e-24	72.4	ATP synthase epsilon chain, mi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006721	ATPase, F1 complex, epsilon subunit, mitochondrial	GENE3D	1.10.1620.20		coord: 7..56 score: 5.1
IPR006721	ATPase, F1 complex, epsilon subunit, mitochondrial	PANTHER	PTHR12448	ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIAL	coord: 2..69 score: 9.3
IPR006721	ATPase, F1 complex, epsilon subunit, mitochondrial	PFAM	PF04627	ATP-synt_Eps	coord: 9..56 score: 4.3
IPR006721	ATPase, F1 complex, epsilon subunit, mitochondrial	unknown	SSF48690	Epsilon subunit of mitochondrial F1F0-ATP synthase	coord: 7..52 score: 8.37
None	No IPR available	PANTHER	PTHR12448:SF0	ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL	coord: 2..69 score: 9.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0006833	water transport
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0009853	photorespiration
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0006096	glycolytic process
biological_process	GO:0009060	aerobic respiration
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004427	inorganic diphosphatase activity
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo20489	0.71	Barchart \| Table
Spo07922	0.70	Barchart \| Table
Spo09713	0.69	Barchart \| Table
Spo19658	0.67	Barchart \| Table
Spo24237	0.66	Barchart \| Table