Spo09805 (gene)

Overview
NameSpo09805
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionApocytochrome f (Precursor)
LocationSpoScf_41248 : 31 .. 432 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTAACAGGGGAAGGGGTCAAATTTATCCTGACGGAAGCAAGAGTAATAATACAGTTTATAATTCCACAGCAACAGGTATAGTAAAGAAAATTGTACGAAAAGAAAAGGGCGGATACGAAATAAACATAGCGGATGCCTCGGATGGACGTGAAGTGGTTGATATTATCCCTCGAGGACCAAAGCTTCTTGTTTCCGAGGGTGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGGTTTGGTCAGGGAGACGCAGAAGTAGTACTTCTAGACCCACTGCGCATACAAGGTCTTTTGTTTTTCTTTGCGTCTGTTATTTTAGCACAAATCTTTTTGGTTCTTAAAAAGAAACAATTCGAGAAGGTTCAATTGTCCGAAACGAATTTC

mRNA sequence

GGTAACAGGGGAAGGGGTCAAATTTATCCTGACGGAAGCAAGAGTAATAATACAGTTTATAATTCCACAGCAACAGGTATAGTAAAGAAAATTGTACGAAAAGAAAAGGGCGGATACGAAATAAACATAGCGGATGCCTCGGATGGACGTGAAGTGGTTGATATTATCCCTCGAGGACCAAAGCTTCTTGTTTCCGAGGGTGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGGTTTGGTCAGGGAGACGCAGAAGTAGTACTTCTAGACCCACTGCGCATACAAGGTCTTTTGTTTTTCTTTGCGTCTGTTATTTTAGCACAAATCTTTTTGGTTCTTAAAAAGAAACAATTCGAGAAGGTTCAATTGTCCGAAACGAATTTC

Coding sequence (CDS)

GGTAACAGGGGAAGGGGTCAAATTTATCCTGACGGAAGCAAGAGTAATAATACAGTTTATAATTCCACAGCAACAGGTATAGTAAAGAAAATTGTACGAAAAGAAAAGGGCGGATACGAAATAAACATAGCGGATGCCTCGGATGGACGTGAAGTGGTTGATATTATCCCTCGAGGACCAAAGCTTCTTGTTTCCGAGGGTGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGGTTTGGTCAGGGAGACGCAGAAGTAGTACTTCTAGACCCACTGCGCATACAAGGTCTTTTGTTTTTCTTTGCGTCTGTTATTTTAGCACAAATCTTTTTGGTTCTTAAAAAGAAACAATTCGAGAAGGTTCAATTGTCCGAAACGAATTTC

Protein sequence

GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGPKLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLKKKQFEKVQLSETNF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09805.1Spo09805.1mRNA


Homology
[Close]
BLAST of Spo09805.1 vs. NCBI nr
Match: gi|11497541|ref|NP_054949.1| (cytochrome f [Spinacia oleracea])

HSP 1 Score: 255.4 bits (651), Expect = 5.600e-65
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVL DPLRIQGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLQDPLRIQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. NCBI nr
Match: gi|552888|gb|AAA84632.1| (apocytochrome f precursor [Spinacia oleracea])

HSP 1 Score: 252.3 bits (643), Expect = 4.800e-64
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASD REVVDIIPRGP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDRREVVDIIPRGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVL DPLRIQGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLQDPLRIQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. NCBI nr
Match: gi|910354330|ref|YP_009160815.1| (cytochrome f (chloroplast) [Haloxylon ammodendron])

HSP 1 Score: 250.0 bits (637), Expect = 2.400e-63
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYNSTA GIVKKIVRKEKGGYEINIADASDGREVVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNSTAAGIVKKIVRKEKGGYEINIADASDGREVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. NCBI nr
Match: gi|628819120|gb|AHY80553.1| (cytochrome f (plastid) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 246.9 bits (629), Expect = 2.000e-62
Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TA GIV KIVRKEKGGYEINIADASDGREVVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATAAGIVNKIVRKEKGGYEINIADASDGREVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. NCBI nr
Match: gi|916439395|gb|AKZ22402.1| (cytochrome f (plastid) [Silene vulgaris])

HSP 1 Score: 245.4 bits (625), Expect = 5.800e-62
Identity = 124/134 (92.54%), Postives = 130/134 (97.01%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TATGIVKKI+RKEKGGYEI+IADA DGREVVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATATGIVKKILRKEKGGYEISIADALDGREVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K8E7_9CARY (Cytochrome f OS=Haloxylon persicum GN=petA PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.600e-63
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYNSTA GIVKKIVRKEKGGYEINIADASDGREVVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNSTAAGIVKKIVRKEKGGYEINIADASDGREVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K867_9CARY (Cytochrome f OS=Haloxylon ammodendron GN=petA PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.600e-63
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYNSTA GIVKKIVRKEKGGYEINIADASDGREVVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNSTAAGIVKKIVRKEKGGYEINIADASDGREVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. UniProtKB/TrEMBL
Match: A0A023ZPT1_BETVU (Cytochrome f OS=Beta vulgaris subsp. vulgaris GN=petA PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.400e-62
Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TA GIV KIVRKEKGGYEINIADASDGREVVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATAAGIVNKIVRKEKGGYEINIADASDGREVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. UniProtKB/TrEMBL
Match: B0LNQ0_SILLA (Cytochrome f OS=Silene latifolia GN=petA PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.100e-62
Identity = 124/134 (92.54%), Postives = 130/134 (97.01%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TATGIVKKI+RKEKGGYEI+IADA DGREVVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATATGIVKKILRKEKGGYEISIADALDGREVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. UniProtKB/TrEMBL
Match: B0LNK8_9CARY (Cytochrome f OS=Silene integripetala GN=petA PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.100e-62
Identity = 124/134 (92.54%), Postives = 130/134 (97.01%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TATGIVKKI+RKEKGGYEI+IADA DGREVVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATATGIVKKILRKEKGGYEISIADALDGREVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. ExPASy Swiss-Prot
Match: CYF_SPIOL (Cytochrome f OS=Spinacia oleracea GN=petA PE=3 SV=3)

HSP 1 Score: 255.4 bits (651), Expect = 3.500e-67
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVL DPLRIQGLLFFFASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLQDPLRIQGLLFFFASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. ExPASy Swiss-Prot
Match: CYF_HELAN (Cytochrome f OS=Helianthus annuus GN=petA PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.300e-63
Identity = 121/134 (90.30%), Postives = 129/134 (96.27%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TA+GIV KI+RKEKGGYEI IADASDGR+VVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATASGIVSKILRKEKGGYEITIADASDGRQVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFA+VILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFAAVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. ExPASy Swiss-Prot
Match: CYF_SORBI (Cytochrome f OS=Sorghum bicolor GN=petA PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.000e-63
Identity = 119/134 (88.81%), Postives = 129/134 (96.27%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+T+TGIVKKI+RKEKGGYEI+I DASDGR+V+DIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATSTGIVKKILRKEKGGYEISIVDASDGRQVIDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFFFASVILAQ+FLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQVFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQL E NF
Sbjct: 307 KKQFEKVQLYEMNF 320
[Close]
BLAST of Spo09805.1 vs. ExPASy Swiss-Prot
Match: CYF_CALFG (Cytochrome f OS=Calycanthus floridus var. glaucus GN=petA PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.200e-62
Identity = 121/134 (90.30%), Postives = 128/134 (95.52%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TA GIV +IVRKEKGGYEI+IADASDGR+VVDIIP GP
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATAAGIVSRIVRKEKGGYEISIADASDGRQVVDIIPPGP 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFF ASVILAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFLASVILAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
[Close]
BLAST of Spo09805.1 vs. ExPASy Swiss-Prot
Match: CYF_OENPA (Cytochrome f OS=Oenothera parviflora GN=petA PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.500e-62
Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TA GIV KI+RKEKGGYEI I DASDGR+VVDIIP GP
Sbjct: 185 GNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEKGGYEITITDASDGRQVVDIIPSGP 244

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVL DPLR+QGLLFF ASVILAQIFLVLK
Sbjct: 245 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLQDPLRVQGLLFFLASVILAQIFLVLK 304

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 305 KKQFEKVQLSEMNF 318
[Close]
BLAST of Spo09805.1 vs. TAIR (Arabidopsis)
Match: ATCG00540.1 (photosynthetic electron transfer A)

HSP 1 Score: 233.0 bits (593), Expect = 1.100e-61
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 1 

		  

Query: 1   GNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGP 60
           GNRGRGQIYPDGSKSNNTVYN+TA GI+ KI+RKEKGGYEI I DAS+GREV+DIIPRG 
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATAGGIISKILRKEKGGYEITIVDASNGREVIDIIPRGL 246

Query: 61  KLLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLLDPLRIQGLLFFFASVILAQIFLVLK 120
           +LLVSEGESIKLDQPLTSNPNVGGFGQGDAE+VL DPLR+QGLLFF  SV+LAQIFLVLK
Sbjct: 247 ELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFLGSVVLAQIFLVLK 306

Query: 121 KKQFEKVQLSETNF 135
           KKQFEKVQLSE NF
Sbjct: 307 KKQFEKVQLSEMNF 320
The following BLAST results are available for this feature:
BLAST of Spo09805.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|11497541|ref|NP_054949.1|5.6e-6597.7cytochrome f [Spinacia olerace... [more]
gi|552888|gb|AAA84632.1|4.8e-6497.0apocytochrome f precursor [Spi... [more]
gi|910354330|ref|YP_009160815.1|2.4e-6394.7cytochrome f (chloroplast) [Ha... [more]
gi|628819120|gb|AHY80553.1|2.0e-6293.2cytochrome f (plastid) [Beta v... [more]
gi|916439395|gb|AKZ22402.1|5.8e-6292.5cytochrome f (plastid) [Silene... [more]
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BLAST of Spo09805.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K0K8E7_9CARY1.6e-6394.7Cytochrome f OS=Haloxylon pers... [more]
A0A0K0K867_9CARY1.6e-6394.7Cytochrome f OS=Haloxylon ammo... [more]
A0A023ZPT1_BETVU1.4e-6293.2Cytochrome f OS=Beta vulgaris ... [more]
B0LNQ0_SILLA4.1e-6292.5Cytochrome f OS=Silene latifol... [more]
B0LNK8_9CARY4.1e-6292.5Cytochrome f OS=Silene integri... [more]
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BLAST of Spo09805.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CYF_SPIOL3.5e-6797.7Cytochrome f OS=Spinacia olera... [more]
CYF_HELAN5.3e-6390.3Cytochrome f OS=Helianthus ann... [more]
CYF_SORBI9.0e-6388.8Cytochrome f OS=Sorghum bicolo... [more]
CYF_CALFG1.2e-6290.3Cytochrome f OS=Calycanthus fl... [more]
CYF_OENPA1.5e-6290.3Cytochrome f OS=Oenothera parv... [more]
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BLAST of Spo09805.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
ATCG00540.11.1e-6186.5photosynthetic electron transf... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002325Cytochrome fPRINTSPR00610CYTOCHROMEFcoord: 3..26
score: 8.9E-64coord: 115..132
score: 8.9E-64coord: 94..114
score: 8.9E-64coord: 52..72
score: 8.9E-64coord: 73..93
score: 8.9
IPR002325Cytochrome fPFAMPF01333Apocytochr_F_Ccoord: 16..134
score: 5.8
IPR002325Cytochrome fPROFILEPS51010CYTFcoord: 1..134
score: 4
IPR011054Rudiment single hybrid motifunknownSSF51246Rudiment single hybrid motifcoord: 17..79
score: 2.54
IPR024058Cytochrome f transmembrane anchorGENE3D1.20.5.700coord: 100..134
score: 5.3
IPR024058Cytochrome f transmembrane anchorunknownSSF103431Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchorcoord: 96..134
score: 3.79
IPR024094Cytochrome f large domainGENE3D2.60.40.830coord: 1..16
score: 4.4E-17coord: 78..99
score: 4.4
IPR024094Cytochrome f large domainunknownSSF49441Cytochrome f, large domaincoord: 79..99
score: 4.84E-13coord: 1..16
score: 4.84
NoneNo IPR availableGENE3D2.40.50.100coord: 20..77
score: 1.3
NoneNo IPR availablePANTHERPTHR33288FAMILY NOT NAMEDcoord: 1..134
score: 1.1
NoneNo IPR availablePANTHERPTHR33288:SF3APOCYTOCHROME Fcoord: 1..134
score: 1.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015979 photosynthesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0031361 integral component of thylakoid membrane
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo168950.79Barchart | Table
Spo105500.70Barchart | Table
Spo135140.66Barchart | Table