Spo09924 (gene) | SpinachBase

Overview


Name	Spo09924
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Complex 1 LYR-like protein
Location	chr1 : 44193398 .. 44196126 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGTAGTAAATAGCCAATGCCATTGCCTTGTCGAAAGTGGAGAGCAAGTGTTGTGGATTATTCAGCTTATGTCTGCATTTGGTGTTTTGGAGATTGTGTTGTATTCCGAAATCATTGGAAGGAGCTTATCATGTTTTGAATAGTTGAGATTTTTGAGAGCGGGATGTAATGAAGTAAAACACCCTGTTTAGTAGTTGGTAATAAATGGTAGTATTGGGAGTGAAATTGTATTTTAAATTTGTAACATAAGTCAAATACCAATGCCTGTATAGTAAAGAAATTTACTTTGAGTATCTCATTTTCTTCATAAATCTGCATTATCATCCATAAACACTTACACTTTGTTTGGATAAGAGAAAATGGAGAGAAAGGGAGGGAAGGGAAAGGAAGGAAGGAAGGAAGGGGTGGGAGAGGGAGAACTCATTTTCCCTCCCTCTCTAGTGAGCACCACCCCTTTAAAATTGGAGAGATTTTGAGAGAAAATTGAGTTCACCTTCCCTTCCCCTTTCTCCTCCTTACCTGCCATTCCTTTCCTTTATGTTTTGCTATCCAAACATGCCTTTAGCCATTTAGGAGGAGATATTGGAAATTCATGAAGAAAAACACAAGTTTAGATGATATTGCATTACAATGGACAACATTATGGTGTTACTTTTTCTAGCCAAATTACACTTTGATTAATCCCATTGCTACCATTTATTACCAATTACCAAACGGGCCGTGATTATTATGAACAAGTGATTCCAATATTTGATTTTGATACATATCAATATGTCATGGTGAAGAAGATGACTTTGTAAATCAACTACCGCCTATATGTGGCTTCTTTTGAGAAAAATGTACACCAATGTTGGAATCAAGTTGCATTTAAGAACTAATATGAACACATGGAACCCCTCCCGAACATCACTTGTATCCACCAATGATATCCAAACTCGTCCTATTTCTGTCGTGTTGTCCTTAGGAAGATTTTTGTTCTTCTGACTTGCATACTACTGTCTTTACTAAAAGCTGACTTGTTCATTCGGTACCCTTGTGCCAGAAAGGAAGGAAGCAAGAACGCATTTAGCATTAAGAAGGGAGAAAGAGAAGGAATGGGGTCAGAAGGTCTACATGCTGTGAAAGTTTGTAGGCACCTTCTCAAATCCGTGAAGAAACACATTGGTCAGGAGGACTACAAGCGACACTTCAGTGATTTTATAATGGAAGAGTTTAAGAAGAACCGGGGACTGTTGGATCCATCATCTTTGCAGAACAAACTGAAGCTTGCTCGTGATTACACTTTCTTGCTTAATAGTGTCCATCATCACCAGGTATTTTGTTCTTTAGCCTTGCTATTTGTGCAGTGAAGTTTCATTTATAGACAATTAGACATACATAGAAGAAGAAGCCATAACTTGTTTCTTTCATGTTCTTTTTATGTATAGTTTCCCTTGAAAAAATGTATGCTTTCTATTTCTTTGTTGAAATCTTCTGCCCTCTCATACTCTTGTTCATTATGGGATGTTTTGATTTTGCCGGAGTCCCTCAGTTTTTATTTAAGAGTATTGGGTTTTGCTACCAAATAATTTGCATGATACTCGAGTGCATCTTTTCAGTTAGTTTTCTGATGCTGTTTGTAAGCTGTCTATTTATCATTTATGTGTTAAATCCATCTGTTTTTTTTTTCTTTTCTTGGGAGCTCTTTGATTTGTTCTTTCTAAGTACTTGATAGCGGAAATGAACATTAAGTAGAATTGAACTGTTGGCCCTGTTTCAATGCCCGGTTTCAATGCTGAAGAAACTCGAGAAAGTATTTAAAGTTTGTGGATATCAACAATGCATCATCTGAATCTTATACGAAGTATTTGTTTTAGGACCATACTGTAATGTTTTTGCCAAGTATTTATGCTCATCTGCTACAAAATCTATGTCAATTGGTGCACTGGTGTCTTTATTTAATAAATGATCTTGGAACCTTTTTCTTTCTTAGGAGCTGCTATTCTCGTACAATATTGCTGTGGACAGAACAGATGAGATGAAAAGGATACTTGGAAAATCAGCTGCCAGTGTAGGCCTTCAGCTTCCAGAGGTTTATCAGTCTTGACACTAGTAAACCACCTAATGTACCTCTTTGCCTTCCTTTTCATAGCCTCATAATAAGCAGACTAGTACAATAATTAAGCTCGGCACAATTTTGACAATTTTCGGAAAGAAATGGATTAGGTATTGACTATTTGATATGCAAGCACTTGTCCGTCCGATTGTAATGTAAATGTATTGAGCAATGTATGAGAAATAGCACACATGAACGATGTTTGTTCCAGCAGTAGATATCCGACTCTTTTTTGAAAATTTCAGTTTTAAGTTTTAACATCCCAATATCAAGTACTCTGTGAGTGAAATTATTCAGGTATTCAAATCGAAAGACTGGTCAATTTTATATGATTCGGAACAGGCCAGTGTCCGTCCCAGTTGGAGCTTCTCATCAACGGGTACCATTGTTGTGCTATCAAGGCTCCTGGCAGTCCTGCTGCATCTACCCTTTTACCCAGATATTATGATTTATAATAAGCAATTGTAATTTAATAGAGCATATCACATCACACCACACATGTCATGATTATTTTATTTTGGACGACCACATTTGCGAAATCAGATCTAAAAAAAGTGATTTGCTGGTGGTACAACTTGTCATATTGACTATTTCTGTTGTCTCTTTGGACGGACGAATAATGCCATA

mRNA sequence

ATGGAAGGAGTAGTAAATAGCCAATGCCATTGCCTTGTCGAAAGTGGAGAGCAAGTGTTGTGGATTATTCAGCTTATGTCTGCATTTGGTGTTTTGGAGATTGTGTTAAAGGAAGGAAGCAAGAACGCATTTAGCATTAAGAAGGGAGAAAGAGAAGGAATGGGGTCAGAAGGTCTACATGCTGTGAAAGTTTGTAGGCACCTTCTCAAATCCGTGAAGAAACACATTGGTCAGGAGGACTACAAGCGACACTTCAGTGATTTTATAATGGAAGAGTTTAAGAAGAACCGGGGACTGTTGGATCCATCATCTTTGCAGAACAAACTGAAGCTTGCTCGTGATTACACTTTCTTGCTTAATAGTGTCCATCATCACCAGGAGCTGCTATTCTCGTACAATATTGCTGTGGACAGAACAGATGAGATGAAAAGGATACTTGGAAAATCAGCTGCCAGTGTAGGCCTTCAGCTTCCAGAGGTTTATCAGTCTTGACACTAGTAAACCACCTAATGTACCTCTTTGCCTTCCTTTTCATAGCCTCATAATAAGCAGACTAGTACAATAATTAAGCTCGGCACAATTTTGACAATTTTCGGAAAGAAATGGATTAGGTATTGACTATTTGATATGCAAGCACTTGTCCGTCCGATTGTAATGTAAATGTATTGAGCAATGTATGAGAAATAGCACACATGAACGATGTTTGTTCCAGCAGTAGATATCCGACTCTTTTTTGAAAATTTCAGTTTTAAGTTTTAACATCCCAATATCAAGTACTCTGTGAGTGAAATTATTCAGGTATTCAAATCGAAAGACTGGTCAATTTTATATGATTCGGAACAGGCCAGTGTCCGTCCCAGTTGGAGCTTCTCATCAACGGGTACCATTGTTGTGCTATCAAGGCTCCTGGCAGTCCTGCTGCATCTACCCTTTTACCCAGATATTATGATTTATAATAAGCAATTGTAATTTAATAGAGCATATCACATCACACCACACATGTCATGATTATTTTATTTTGGACGACCACATTTGCGAAATCAGATCTAAAAAAAGTGATTTGCTGGTGGTACAACTTGTCATATTGACTATTTCTGTTGTCTCTTTGGACGGACGAATAATGCCATA

Coding sequence (CDS)

ATGGAAGGAGTAGTAAATAGCCAATGCCATTGCCTTGTCGAAAGTGGAGAGCAAGTGTTGTGGATTATTCAGCTTATGTCTGCATTTGGTGTTTTGGAGATTGTGTTAAAGGAAGGAAGCAAGAACGCATTTAGCATTAAGAAGGGAGAAAGAGAAGGAATGGGGTCAGAAGGTCTACATGCTGTGAAAGTTTGTAGGCACCTTCTCAAATCCGTGAAGAAACACATTGGTCAGGAGGACTACAAGCGACACTTCAGTGATTTTATAATGGAAGAGTTTAAGAAGAACCGGGGACTGTTGGATCCATCATCTTTGCAGAACAAACTGAAGCTTGCTCGTGATTACACTTTCTTGCTTAATAGTGTCCATCATCACCAGGAGCTGCTATTCTCGTACAATATTGCTGTGGACAGAACAGATGAGATGAAAAGGATACTTGGAAAATCAGCTGCCAGTGTAGGCCTTCAGCTTCCAGAGGTTTATCAGTCTTGA

Protein sequence

MEGVVNSQCHCLVESGEQVLWIIQLMSAFGVLEIVLKEGSKNAFSIKKGEREGMGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLARDYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo09924.1	Spo09924.1	mRNA

Homology

[Close]

BLAST of Spo09924.1 vs. NCBI nr
Match: gi|902227476|gb|KNA20713.1| (hypothetical protein SOVF_050020 [Spinacia oleracea])

HSP 1 Score: 222.6 bits (566), Expect = 4.900e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR
Sbjct: 1   MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 164
           DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS
Sbjct: 61  DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 110

[Close]

BLAST of Spo09924.1 vs. NCBI nr
Match: gi|731349141|ref|XP_010685845.1| (PREDICTED: uncharacterized protein LOC104900181 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 197.6 bits (501), Expect = 1.700e-47
Identity = 97/110 (88.18%), Postives = 104/110 (94.55%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           MGSE LHAVKVC+HLLKSVKKHIGQEDYKRHF+DFI EEF+KN  L DPSS+QNKLKLAR
Sbjct: 1   MGSETLHAVKVCKHLLKSVKKHIGQEDYKRHFTDFIKEEFQKNDKLSDPSSVQNKLKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 164
           DYTFLLNS+HH +ELLFSYNIAVDRT+EMKRILGKSAASVGLQLPEVYQS
Sbjct: 61  DYTFLLNSIHHQKELLFSYNIAVDRTEEMKRILGKSAASVGLQLPEVYQS 110

[Close]

BLAST of Spo09924.1 vs. NCBI nr
Match: gi|731323092|ref|XP_010672244.1| (PREDICTED: uncharacterized protein LOC104888844 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 196.4 bits (498), Expect = 3.800e-47
Identity = 96/110 (87.27%), Postives = 103/110 (93.64%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           MGSE +HAVKVC+HLLKSVKKHIGQEDYKRHF+DFI EEFKKN  L DPSS+QNKLKLAR
Sbjct: 1   MGSETIHAVKVCKHLLKSVKKHIGQEDYKRHFTDFIKEEFKKNDKLSDPSSVQNKLKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 164
           DYTFLLNS+HH +ELLFSYNIAVDRT+EMKR LGKSAASVGLQLPEVYQS
Sbjct: 61  DYTFLLNSIHHQKELLFSYNIAVDRTEEMKRTLGKSAASVGLQLPEVYQS 110

[Close]

BLAST of Spo09924.1 vs. NCBI nr
Match: gi|731343964|ref|XP_010683159.1| (PREDICTED: uncharacterized protein LOC104897890 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 181.0 bits (458), Expect = 1.600e-42
Identity = 90/110 (81.82%), Postives = 99/110 (90.00%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           MGSE LHAVKV R LLK VKKHIGQEDYKRHF+DFI EEFKKN  +  PSS++NKLKLA+
Sbjct: 1   MGSETLHAVKVYRQLLKFVKKHIGQEDYKRHFTDFIKEEFKKNDQVSYPSSVRNKLKLAK 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 164
           DYTFLLNS+HH +ELLFSYN+AVDRT+EMKR LGKSAASVGLQLPEVYQS
Sbjct: 61  DYTFLLNSIHHQKELLFSYNVAVDRTEEMKRTLGKSAASVGLQLPEVYQS 110

[Close]

BLAST of Spo09924.1 vs. NCBI nr
Match: gi|255565822|ref|XP_002523900.1| (PREDICTED: uncharacterized protein LOC8263366 [Ricinus communis])

HSP 1 Score: 177.9 bits (450), Expect = 1.400e-41
Identity = 85/109 (77.98%), Postives = 98/109 (89.91%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           M  E LHAVKV RHLLK++KKHIGQEDYK+HF +F+M EF+KN  L D S++Q K+KLAR
Sbjct: 1   MSFEALHAVKVYRHLLKAIKKHIGQEDYKKHFGEFVMLEFRKNTNLSDHSAIQQKIKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQ 163
           +YTFLLNSVHHH++LLFSYNIAVDR+DEMKRILGKSAASVGLQLPEVYQ
Sbjct: 61  NYTFLLNSVHHHKDLLFSYNIAVDRSDEMKRILGKSAASVGLQLPEVYQ 109

[Close]

BLAST of Spo09924.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMK3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_050020 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.400e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR
Sbjct: 1   MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 164
           DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS
Sbjct: 61  DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 110

[Close]

BLAST of Spo09924.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZ87_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174640 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.200e-47
Identity = 97/110 (88.18%), Postives = 104/110 (94.55%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           MGSE LHAVKVC+HLLKSVKKHIGQEDYKRHF+DFI EEF+KN  L DPSS+QNKLKLAR
Sbjct: 1   MGSETLHAVKVCKHLLKSVKKHIGQEDYKRHFTDFIKEEFQKNDKLSDPSSVQNKLKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 164
           DYTFLLNS+HH +ELLFSYNIAVDRT+EMKRILGKSAASVGLQLPEVYQS
Sbjct: 61  DYTFLLNSIHHQKELLFSYNIAVDRTEEMKRILGKSAASVGLQLPEVYQS 110

[Close]

BLAST of Spo09924.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQE0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057680 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.600e-47
Identity = 96/110 (87.27%), Postives = 103/110 (93.64%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           MGSE +HAVKVC+HLLKSVKKHIGQEDYKRHF+DFI EEFKKN  L DPSS+QNKLKLAR
Sbjct: 1   MGSETIHAVKVCKHLLKSVKKHIGQEDYKRHFTDFIKEEFKKNDKLSDPSSVQNKLKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQS 164
           DYTFLLNS+HH +ELLFSYNIAVDRT+EMKR LGKSAASVGLQLPEVYQS
Sbjct: 61  DYTFLLNSIHHQKELLFSYNIAVDRTEEMKRTLGKSAASVGLQLPEVYQS 110

[Close]

BLAST of Spo09924.1 vs. UniProtKB/TrEMBL
Match: B9SD31_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1068300 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 9.700e-42
Identity = 85/109 (77.98%), Postives = 98/109 (89.91%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           M  E LHAVKV RHLLK++KKHIGQEDYK+HF +F+M EF+KN  L D S++Q K+KLAR
Sbjct: 1   MSFEALHAVKVYRHLLKAIKKHIGQEDYKKHFGEFVMLEFRKNTNLSDHSAIQQKIKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQ 163
           +YTFLLNSVHHH++LLFSYNIAVDR+DEMKRILGKSAASVGLQLPEVYQ
Sbjct: 61  NYTFLLNSVHHHKDLLFSYNIAVDRSDEMKRILGKSAASVGLQLPEVYQ 109

[Close]

BLAST of Spo09924.1 vs. UniProtKB/TrEMBL
Match: A0A067LNV6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06670 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.200e-41
Identity = 84/109 (77.06%), Postives = 99/109 (90.83%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           M SE LHAVKV R L+K+VKKHIG+EDYK+HF +F+++EF+KN  L D SS+Q K+KLAR
Sbjct: 1   MSSEALHAVKVYRQLIKAVKKHIGKEDYKKHFGEFLIQEFRKNSNLSDNSSIQQKIKLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQ 163
           DYTFLLNSVHHH+ELLFSYNIAVDR+DEMKRILGKSA+SVGLQLPEVY+
Sbjct: 61  DYTFLLNSVHHHKELLFSYNIAVDRSDEMKRILGKSASSVGLQLPEVYR 109

[Close]

BLAST of Spo09924.1 vs. TAIR (Arabidopsis)
Match: AT5G51960.1 (Complex 1 LYR protein (InterPro:IPR008011))

HSP 1 Score: 132.5 bits (332), Expect = 2.400e-31
Identity = 65/109 (59.63%), Postives = 84/109 (77.06%), Query Frame = 1


		  
Query: 54  MGSEGLHAVKVCRHLLKSVKKHIGQEDYKRHFSDFIMEEFKKNRGLLDPSSLQNKLKLAR 113
           M  E + A +V R LLK+V KH+G+ED+K HF DF+ +EF+KN           K+ LAR
Sbjct: 1   MSGEVVLAARVYRDLLKAVVKHVGKEDHKSHFLDFVKQEFRKNAN-------SEKINLAR 60

Query: 114 DYTFLLNSVHHHQELLFSYNIAVDRTDEMKRILGKSAASVGLQLPEVYQ 163
           +YT+LLNS+H H++LLFSYNIAVDRT+EMKR+L KSAASVGL+LPEVY+
Sbjct: 61  NYTYLLNSIHSHKDLLFSYNIAVDRTEEMKRVLNKSAASVGLRLPEVYE 102

The following BLAST results are available for this feature:

BLAST of Spo09924.1 vs. NCBI nr
BLAST of Spo09924.1 vs. UniProtKB/TrEMBL
BLAST of Spo09924.1 vs. ExPASy Swiss-Prot
BLAST of Spo09924.1 vs. TAIR (Arabidopsis)

BLAST of Spo09924.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902227476\|gb\|KNA20713.1\|	4.9e-55	100.	hypothetical protein SOVF_0500...	[more]
gi\|731349141\|ref\|XP_010685845.1\|	1.7e-47	88.1	PREDICTED: uncharacterized pro...	[more]
gi\|731323092\|ref\|XP_010672244.1\|	3.8e-47	87.2	PREDICTED: uncharacterized pro...	[more]
gi\|731343964\|ref\|XP_010683159.1\|	1.6e-42	81.8	PREDICTED: uncharacterized pro...	[more]
gi\|255565822\|ref\|XP_002523900.1\|	1.4e-41	77.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo09924.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RMK3_SPIOL	3.4e-55	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BZ87_BETVU	1.2e-47	88.1	Uncharacterized protein OS=Bet...	[more]
A0A0J8CQE0_BETVU	2.6e-47	87.2	Uncharacterized protein OS=Bet...	[more]
B9SD31_RICCO	9.7e-42	77.9	Putative uncharacterized prote...	[more]
A0A067LNV6_JATCU	2.2e-41	77.0	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo09924.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo09924.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G51960.1	2.4e-31	59.6	Complex 1 LYR protein (InterPr...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 65..115 score: 1.
None	No IPR available	PANTHER	PTHR35763	FAMILY NOT NAMED	coord: 31..162 score: 2.2
None	No IPR available	PANTHER	PTHR35763:SF1	SUBFAMILY NOT NAMED	coord: 31..162 score: 2.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0006810	transport
biological_process	GO:0034969	histone arginine methylation
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005850	eukaryotic translation initiation factor 2 complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008469	histone-arginine N-methyltransferase activity
molecular_function	GO:0003743	translation initiation factor activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo00504	0.71	Barchart \| Table
Spo12071	0.70	Barchart \| Table
Spo18598	0.70	Barchart \| Table
Spo25481	0.69	Barchart \| Table
Spo20295	0.69	Barchart \| Table
Spo00616	0.67	Barchart \| Table
Spo05137	0.66	Barchart \| Table
Spo06851	0.65	Barchart \| Table