Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGAGTCAATTTCAAGTAGTTAGATGTGAGAGTACAAGTTGTGTAGCCTGAAACCCAGCTCCCAAAAAACTGAAAAAGCATTCTGACACTCGGCCTCCCTCACTCTCTTTTCAGTCTACAACAATCCATTTTTGCGCACCATTTTAATCCCCCCATTTTTTCTACTAATTCATTCTTCTTAATTACTGTTTCTCTCCCTTAAATATTTTATTGTTAATTGCTACGGAGTAAAACCCTTTGTCCTTTATCATCTTTATTTTCTGCACTTTTCCAAAGAAAAACAGCAATTCACAACCTAAAAGCCCCTATATTGATTCCCAAAACAGCAATTTTTCCCTTTCTTTGTACTTAATTCAACTTTAGAAAACAGTTTTTCTGTGCTAATTTTGCAAATTTCAGATCTGAAGCCTTAAATATTAAAGAACCCTGTTTTCTGTTTCAAGGGTTTTAGCAGCTACTTTTGTAAAGATTGAATTTCATAAAAGAAAAATAAACCTTTTTAAATTGTTAGTTTTTGTTATTTCAATTGGGAAATTTTACCCTTTTTTTTTTGGTTGCCAATTTCATTTTAATGGGTATCTTGAAAAACCCTTCTAAATTCACAAATCATGCAAATCTTGTACAATTTCAAAGGAAACAGCTGATTCTCTAATCTGGGTTTATATAAACTTTGTCCACCTTTCCGCTGGACTTCATTTACATGAAGGCGGATTTCCAAAGAAATTCTCAGAGAAGAAGAAAAAGTGCAAAAGAAGAAGATGATTCAGCTCTTGTTCCTAGTTCTGTGTGTAGAAATTGGGGTGGCATTTCTCTTGCTAGTGAAAGTGGGTCCATTGAGAGAGCTTGTAATGAAGAGCTTGGATCAGGTTAAATTGGGTAAAGGTCCAGCAACAGTGAAGACCATTGCTGGTACAATGTCTGTGATTTTTATGTTCCATCTTATGAATATTTTGAAGATCCAGAATAAGGGAAATAAGCTTGGTACTATGTCACCTATGGATCAAGTTCTATGGAGGACCCACTTGCTTGAGGCTTCTCTTATGGGTATGATCTCCCATTCTGTATGTTGAATTTCTTGTTGGTTTGGTTTGGTTTGTTTCGCCTAGTTTGTTGTTTCGTGCTGTCGATTGCTTTGTTTGTGTTGATGTTATGAGTTGTGATGTGTAGTTAGAATGACCATTGTTTAGGAAATTGTTTAATTTGTGATGCTAGTATGTGGCATTGTGGAGGAGAGTGATTAGTTTTTTTTTTTGTGTGTGGTAATATTGAGAGATCATGTAGTTAGTATTTGGAGAATTCAAGGGTGTGTGTTCTTATTATTTGGGACAAACAAGGGTATTGTGATTTGTGAATAAGGGAATTCCACTGAATTGAATGTTAAATTTTGTGTGAATGATTGGAAATGGCATAACTTCGCGATGAACAATGGGTGTTGGATAGACTTGTTGGTAATAAGCAACTTGGCAGCTAGCATCTAGTGTTAGAACTTTGGTAATGATAGCTTGCAGAATTTGGCTAGTGTTCTGGTGAAGCCTAATATGGTACTTGAAGTATGGAATGGAAATCAATCAAATCTTGAAATAGCCGTTTAGTAGTTTGGAAATTGTCACGATAAAGCCAATATGCTGTTTACAAATGATGGTTCGCAGAAACAGATGGAATTACATGCCATTTTGGTCAAAATGATCCCAATCCAAATAATATCTAAAATGTTGTTTACGTAAAAGCCAATATCTGTGTTTGTTTATAGTGTTAGAATAGTATATGGCTAGCATTTAGAGCATTCGGAGTGTTAATTCCCGGTATCTTGGAAAAAATGAGGAAAAGAGAATTTAGAATATCCCATTGATGAGGTTTTGGTGAATTGTTTGTTACTTAAAAAAAAAGTTATTGTTAATCCATTGTTCCATGCTCCCTTTTGTCCTTAGTGTTTGCCCCAAAAGAGCTCTTCACATTTTTAAGAGCTAGGCAAAGTTGTGCAAGCGGAGTTGTCCTTTTTTGCCTTTATTGGGGCTTGGGGAGTTGGGGTGTTAAGTTGGGAAAGTCAACAAAAAATCTATGGGGCAAATTCGAAGGGACAAACCAAATAGGAAACCTGTGGCAGTCTGAAGGGACGTGGGAAATATGAGTTTGGGTGTCTACAAGGGATCTCCATAACAAGAATGTATTGTATGAAATTTGACCTTTTTTTTTGGACATAGGCTAAAGGTGTAACCTGTAACGTTTAAGGCTCTTATAGTTGTACTGTTGTAGGTTGAGATTAGTAAGAGTAAATTGGAGTTAACATTTGTCGTTTAAGGTGGAAACTGAATAAGGCATTGTTACTTTACCAGTCTCTGTTAAATTACTGTAAGGTTTGAAGGGATGCTTTCTCTGAGTTTTCTCTCTGAAATGTACCAAAGAAATTCAGATGCATATTCTGTTGATGAGATTTTTCTTGGTGCAAGCAAGTCTTGATTGGTTTTTCTGGACTTTTCCTAGTTGAGTGTCTCAAGAAATTATATGTGCATGCTGTTCAACTGCCATGAGCAGCTCCTAAGATTTGCATCTTGTGGTCAGTCTTAGGTGTTAAATGTTGGCGATATTACCATTTGCAATCTCAACATGTTATATCCCAGATGCTTTCTCCTTAGTAAAAAGTCATATGACCTTAATGTAGAATAACAGTTGGTCTGAGATTCCCATATACTTAAACTAGACTATTTCATATTTTCATCTGTACGCCTGGCCGCACCAGTGGTCTTTCTGATAGATTGGGTGACGTTTGAAAAGACTTAACATTGCATTAATAGCATGTTAAGGTATGGTTTTGTATTAAGAATCTATATAGCTCCTTAATGCGAAAATTTGGTGAAAATGAACGTAAAACAATTAGAAGGCAGCTGCTTTCTTGTTTATCACTTGAAATTAGCTGAAAATAGCTGTTCATTTGGAAATTTTTTGGTTGAATTAATCATCTAGTTGTAAAACAGCTTTCTCGAATTTGCTTGCCGTTTACCTTGTGCAAGAACGTGCTTACCTGGACGTCGATGGCTGTTTTTAGAAAGCTGCGTATAACTAATGTGTCGTGCTCAACAGTCCAAGTATCTATAATTGCGTCAATTGGTTGAGGTTAAATGAGGAACCAACCTATGTATTGCTATGTTATTCCTTGGAGCTCCAAACATTAGCACCTAATAGTTAAACTTAATGTGCACCCTGACATCACAGTGCTCTTTTTATCTGGACGTCACCAAATTGATGGGATATTTTTGACTTTTATATAAAAACAATGATTGTACAACACGTACTCCTGTGTTAAAATGACAAGACGGGCTACTACATTCTTAGGGTTTGAACATAGAGTCTTGGCTAAGCTGGAACAACTACCTTACCAGAGTCAAGAATGCGGTGATTCGGTTTGAACATAGTATTTCTGTTTAATTAACTTGTACTAGAAAATTCTTTTCTTCTTTTACTTGCGTAGTACAATTCTTCTTCCTTGCTTGAGGTCGCTCCTGTTATCTGTCAGTATGAAACATATACTTGTTCACTCTTTTGAATTACGAGAACATGGCCATTTGCTGCCTTGAATTAGATTTACTCTCATCTACTTAAATATGGCAGTGACATGTTCTCACCAAAAACGACATCCCTTGTATTTTTGACAGTTTGATTTCTTGCTTTTAACTAGTTTGGGCATCTAACAAAGAAAGCTTAAATTCTTTTACAGGGTTTACTTTATTTCTCGGCTTCTTAATTGAACGTATGCACCATTATCTTCGCAAACTCATTAATATTAGAAGCAAGGTTGGAGCATCAAAAGAGGAGACGGAGAAGCTTGAGAAAGAGAAACAACAACTCAAGGAAAAGGAAGTGAAGGCTTCAAAAGAAATAGCAAAGCTACAAAACGAGCTGTCAAAGCTAACAGATGAAATAAAGAAGGTGAAAGAGGAATCACAAGAGAAAGACAAAACGATTGAGACCGCTGATGGTCATGTAGTTGCCCTTCAGAAACAAGCAGCTGATTTGCTTCTCGAGTATGACCGTCTTTTAGAGGATAACCAACATCTTCAGACCCAACTTCAAAAAAGGTGACAAAACGAACTCGACTAGAATTTTAAGTCAGATACAAACATTTTGAGATTCATATGGTTAAGGCTTTTGTGCCAAAAAAACCTATTTTTTCTCTCTTTTTCAGTTGGACATAAATGATGAATTGTTGTCATTGATGATGGATATCCGATCCCTTCTTTTGGGGCATGGTGTTTGGGGGTTAGAATGAAGGGATTGGAACTCGGTTAATGTAATGGGATCGATGTTCGGGGGTGCTAATTTTTTTTGCAACTTTGATAATTAGTTTTTGTATCCGAAACTTGTGTTCGATCTTTCCATTCATATATGTCTTGGTTTACAGCAACCACATTTTCATACTGGCTAATGATGCCTGGATTAGTTTAACGGCTTTGTATTTGGTGAAAAATTTATGTTTCTGAAGGCTGG GCGAGTCAATTTCAAGTAGTTAGATGTGAGAGTACAAGTTGTGTAGCCTGAAACCCAGCTCCCAAAAAACTGAAAAAGCATTCTGACACTCGGCCTCCCTCACTCTCTTTTCAGTCTACAACAATCCATTTTTGCGCACCATTTTAATCCCCCCATTTTTTCTACTAATTCATTCTTCTTAATTACTGTTTCTCTCCCTTAAATATTTTATTGTTAATTGCTACGGAGTAAAACCCTTTGTCCTTTATCATCTTTATTTTCTGCACTTTTCCAAAGAAAAACAGCAATTCACAACCTAAAAGCCCCTATATTGATTCCCAAAACAGCAATTTTTCCCTTTCTTTGTACTTAATTCAACTTTAGAAAACAGTTTTTCTGTGCTAATTTTGCAAATTTCAGATCTGAAGCCTTAAATATTAAAGAACCCTGTTTTCTGTTTCAAGGGTTTTAGCAGCTACTTTTGTAAAGATTGAATTTCATAAAAGAAAAATAAACCTTTTTAAATTGTTAGTTTTTGTTATTTCAATTGGGAAATTTTACCCTTTTTTTTTTGGTTGCCAATTTCATTTTAATGGGTATCTTGAAAAACCCTTCTAAATTCACAAATCATGCAAATCTTGTACAATTTCAAAGGAAACAGCTGATTCTCTAATCTGGGTTTATATAAACTTTGTCCACCTTTCCGCTGGACTTCATTTACATGAAGGCGGATTTCCAAAGAAATTCTCAGAGAAGAAGAAAAAGTGCAAAAGAAGAAGATGATTCAGCTCTTGTTCCTAGTTCTGTGTGTAGAAATTGGGGTGGCATTTCTCTTGCTAGTGAAAGTGGGTCCATTGAGAGAGCTTGTAATGAAGAGCTTGGATCAGGTTAAATTGGGTAAAGGTCCAGCAACAGTGAAGACCATTGCTGGTACAATGTCTGTGATTTTTATGTTCCATCTTATGAATATTTTGAAGATCCAGAATAAGGGAAATAAGCTTGGTACTATGTCACCTATGGATCAAGTTCTATGGAGGACCCACTTGCTTGAGGCTTCTCTTATGGGGTTTACTTTATTTCTCGGCTTCTTAATTGAACGTATGCACCATTATCTTCGCAAACTCATTAATATTAGAAGCAAGGTTGGAGCATCAAAAGAGGAGACGGAGAAGCTTGAGAAAGAGAAACAACAACTCAAGGAAAAGGAAGTGAAGGCTTCAAAAGAAATAGCAAAGCTACAAAACGAGCTGTCAAAGCTAACAGATGAAATAAAGAAGGTGAAAGAGGAATCACAAGAGAAAGACAAAACGATTGAGACCGCTGATGGTCATGTAGTTGCCCTTCAGAAACAAGCAGCTGATTTGCTTCTCGAGTATGACCGTCTTTTAGAGGATAACCAACATCTTCAGACCCAACTTCAAAAAAGGTGACAAAACGAACTCGACTAGAATTTTAAGTCAGATACAAACATTTTGAGATTCATATGGTTAAGGCTTTTGTGCCAAAAAAACCTATTTTTTCTCTCTTTTTCAGTTGGACATAAATGATGAATTGTTGTCATTGATGATGGATATCCGATCCCTTCTTTTGGGGCATGGTGTTTGGGGGTTAGAATGAAGGGATTGGAACTCGGTTAATGTAATGGGATCGATGTTCGGGGGTGCTAATTTTTTTTGCAACTTTGATAATTAGTTTTTGTATCCGAAACTTGTGTTCGATCTTTCCATTCATATATGTCTTGGTTTACAGCAACCACATTTTCATACTGGCTAATGATGCCTGGATTAGTTTAACGGCTTTGTATTTGGTGAAAAATTTATGTTTCTGAAGGCTGG ATGATTCAGCTCTTGTTCCTAGTTCTGTGTGTAGAAATTGGGGTGGCATTTCTCTTGCTAGTGAAAGTGGGTCCATTGAGAGAGCTTGTAATGAAGAGCTTGGATCAGGTTAAATTGGGTAAAGGTCCAGCAACAGTGAAGACCATTGCTGGTACAATGTCTGTGATTTTTATGTTCCATCTTATGAATATTTTGAAGATCCAGAATAAGGGAAATAAGCTTGGTACTATGTCACCTATGGATCAAGTTCTATGGAGGACCCACTTGCTTGAGGCTTCTCTTATGGGGTTTACTTTATTTCTCGGCTTCTTAATTGAACGTATGCACCATTATCTTCGCAAACTCATTAATATTAGAAGCAAGGTTGGAGCATCAAAAGAGGAGACGGAGAAGCTTGAGAAAGAGAAACAACAACTCAAGGAAAAGGAAGTGAAGGCTTCAAAAGAAATAGCAAAGCTACAAAACGAGCTGTCAAAGCTAACAGATGAAATAAAGAAGGTGAAAGAGGAATCACAAGAGAAAGACAAAACGATTGAGACCGCTGATGGTCATGTAGTTGCCCTTCAGAAACAAGCAGCTGATTTGCTTCTCGAGTATGACCGTCTTTTAGAGGATAACCAACATCTTCAGACCCAACTTCAAAAAAGGTGA MIQLLFLVLCVEIGVAFLLLVKVGPLRELVMKSLDQVKLGKGPATVKTIAGTMSVIFMFHLMNILKIQNKGNKLGTMSPMDQVLWRTHLLEASLMGFTLFLGFLIERMHHYLRKLINIRSKVGASKEETEKLEKEKQQLKEKEVKASKEIAKLQNELSKLTDEIKKVKEESQEKDKTIETADGHVVALQKQAADLLLEYDRLLEDNQHLQTQLQKR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo09948.1 vs. NCBI nr
Match: gi|902228606|gb|KNA21184.1| (hypothetical protein SOVF_045720 [Spinacia oleracea]) HSP 1 Score: 390.6 bits (1002), Expect = 1.800e-105 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Spo09948.1 vs. NCBI nr
Match: gi|731347563|ref|XP_010685051.1| (PREDICTED: B-cell receptor-associated protein 31-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 328.2 bits (840), Expect = 1.100e-86 Identity = 185/216 (85.65%), Postives = 201/216 (93.06%), Query Frame = 1
BLAST of Spo09948.1 vs. NCBI nr
Match: gi|15239667|ref|NP_199677.1| (B-cell receptor-associated protein 31-like protein [Arabidopsis thaliana]) HSP 1 Score: 293.1 bits (749), Expect = 3.900e-76 Identity = 159/213 (74.65%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Spo09948.1 vs. NCBI nr
Match: gi|590713749|ref|XP_007049723.1| (B-cell receptor-associated protein 31-like [Theobroma cacao]) HSP 1 Score: 292.7 bits (748), Expect = 5.100e-76 Identity = 162/213 (76.06%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Spo09948.1 vs. NCBI nr
Match: gi|502100408|ref|XP_004491710.1| (PREDICTED: uncharacterized protein LOC101494432 [Cicer arietinum]) HSP 1 Score: 292.4 bits (747), Expect = 6.700e-76 Identity = 161/212 (75.94%), Postives = 186/212 (87.74%), Query Frame = 1
BLAST of Spo09948.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQL8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045720 PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 1.300e-105 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Spo09948.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVM8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167930 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 7.700e-87 Identity = 185/216 (85.65%), Postives = 201/216 (93.06%), Query Frame = 1
BLAST of Spo09948.1 vs. UniProtKB/TrEMBL
Match: Q9FJK4_ARATH (B-cell receptor-associated protein 31-like protein OS=Arabidopsis thaliana GN=At5g48660 PE=2 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 2.700e-76 Identity = 159/213 (74.65%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Spo09948.1 vs. UniProtKB/TrEMBL
Match: A0A061DME9_THECC (B-cell receptor-associated protein 31-like OS=Theobroma cacao GN=TCM_002876 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 3.600e-76 Identity = 162/213 (76.06%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Spo09948.1 vs. UniProtKB/TrEMBL
Match: A9PGI3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s24670g PE=2 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 6.100e-76 Identity = 164/212 (77.36%), Postives = 184/212 (86.79%), Query Frame = 1
BLAST of Spo09948.1 vs. TAIR (Arabidopsis)
Match: AT5G48660.1 (B-cell receptor-associated protein 31-like ) HSP 1 Score: 293.1 bits (749), Expect = 1.400e-79 Identity = 159/213 (74.65%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Spo09948.1 vs. TAIR (Arabidopsis)
Match: AT3G07190.1 (B-cell receptor-associated protein 31-like ) HSP 1 Score: 274.2 bits (700), Expect = 6.700e-74 Identity = 151/213 (70.89%), Postives = 185/213 (86.85%), Query Frame = 1
BLAST of Spo09948.1 vs. TAIR (Arabidopsis)
Match: AT5G42570.1 (B-cell receptor-associated 31-like) HSP 1 Score: 141.0 bits (354), Expect = 8.800e-34 Identity = 87/214 (40.65%), Postives = 134/214 (62.62%), Query Frame = 1
BLAST of Spo09948.1 vs. TAIR (Arabidopsis)
Match: AT1G11905.1 (B-cell receptor-associated protein 31-like ) HSP 1 Score: 115.2 bits (287), Expect = 5.200e-26 Identity = 80/213 (37.56%), Postives = 130/213 (61.03%), Query Frame = 1
BLAST of Spo09948.1 vs. TAIR (Arabidopsis)
Match: AT3G20450.1 (B-cell receptor-associated protein 31-like ) HSP 1 Score: 72.0 bits (175), Expect = 5.000e-13 Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09948.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09948.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09948.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo09948.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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