Spo10023 (gene)

Overview
NameSpo10023
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRPM1-interacting protein 4
Locationchr1 : 44549200 .. 44552254 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGAAAGAGAGAGAATTGTCAAACATTAAACAGTTGTCTTGCCAAGTCAATGGTCTCATACCAAATTGTAGTATACTAAATTATAATTATAATTATAATAACAACCCCCCCTTTCATTTGCAATTTTATTCAATCTTCAAACCCACCTTCCCTCATTATATTTCTTCTTCAACTCCTTTGCTCAATAATTGTTCTTCATCATTTTCCTTGAAAAACCCACCTAATTTCCTCTTATTTTTCTACCTTAATTCTTCATTAGTTTTCATATAATATCCTCTGTTTTCCCAGGTTTTGATATATTTCTAAGTTTGCTGCTTTAATGGCTGTAAGTTTCTCGTTATCCTCAACAGTTTCTTATTCTTTGACCTTTTCATACTGCTTTTTTTTTTTTGGATTAACTTTGCTAGATTTCTTGTTTGTTTTCTGGGTTTTGATTATTTCTCATTTGATTTTTTGTTTCGATTTTTTGATGGTGTAAGATCAAAGATGTTTAAGCTGCTTTGCTGAGTCTGTTCATTATAGTTTGTTTAACTGATGATTTGGGTTTGAATTTGCAAGAAAGTTTAGTATGTCAATGATTTTGATGAATTGTCTGCAATATTCTTGTAAATTTGGCACTAACGGCTAGCAATATTCAAATTTGGCACTAACAAAGTATGTTTTTAATGTAAGACTGGAAAGATTTCATAGTAGATAGTATTTTACAAGATGGGGGTTCGGGTTTAACCGTTTAAGCATCGGAATTGTTGTGAATCATCAGCCGATGAGTCGATGACCCTTTTATCGGACAATGATGTTTCCAATGCAATATTTACTTCTGTCAAGTCAATTTTAGTTATACAGACAATACGTCCGTGTCAAATGTAACCTTTTTCCTAGGGTGGGGTGATGATAATATTCATGATTGTTTAATATCTTTAATAGCAACAAATCTATGTTGATATAGAACATAGATACAAATCTAATGAACTAGTAGAACTTCCATTATTAACATGTGTTTCTGGATGGCTTTTGGTTATCTGATTTCCTCTATGCATGATTAGCCTGTAAGAAATGATGATCGTGTTGTTTTATCTGATGTGAATGTGTGCTTATGAAAGTATGGCACCGAACTTTTTTCAGTAGTTTTCGTCATGTATTCTAATTTATAAGTAGTTAACATGAAAATCTGGTTAATGTACTTGAAAATTTACAGTAACTAACTGTTAAAGATGAAGCTTGGTGCTGAAAATGAAGTATTAATTTGAACCTCTCTGTGTTTTCTGATATCAGCAGTCTAAAGTACCCAAGTTTGGTGCGTGGGAAGGTGGAGAAAACTACACAGTTTTCTTCGACAATGCACGAAAGAAGAAGACTAATGGACAGATGATAAACCCGAATGACCCTCAAGACATGGCTGATATGTTTCCACAAATCGGAGGTCCACCACCTCAGGCTCCTAAAGCCGAACCCAAAGGACAACAATCCAAAACCCCTGAATTTGGTGCCTGGGACAATGGAGAGAACGTTGGCTATACCGAGTATTTTGAAAGTAAAAGGAAAACCAAGAACGGTGAACCCACAGCGTCAACAAATGAGCCACAGCTGAACCGAGACATGCATCCTCGTAAGGATCCTCCATCTAAACCAGAAGCAGCACGGGCAAAGGTGCCACCGTTTGGTGGTTGGGAGAATGGAGGTGAAGGTGGTTATACCCAAAGCTTTGAAAATGTTAGGAAGAATAATAATAAGAATGGGCGTACTGTTACACCAGAACCTTCTTCTGACGCCCCTCAGTTGAACCGCGATGTAGGTGAGCCAGCTCCAGCTAAAGAGGGCCGTGCTAAGGTGCCTGAGTTTGGTGGTTGGAATGAGGGAGAAAATGGCGCATACACTGCTTATTTTGAAAATGCTCGGAAAAATAAGAACGCAGGGCCTGTGCCAGACCCTGCTGAGGTCAACAATAGAGCTCGGCCTTCTACTGGTGCTGGAACCAAAAATAAGGCAGATGATCCTCAGTTGAGAAATAATACAAGTAGAGGGTCTAACTATTCTGTGGCTACTTCTGAAGCTCCTTCCAGAAATGGAAAGCAGAACACAGGGGGCCAATCACCAATCCAGCAGAAAGCAGGCAGGCTTCAGCAAAAACCCCCAGCTAGCCGAGGAAGTCAAACTGTAAGTTCTCCTTAGTCTTTTCAAAATGTCCTCCCACCAAACGAGCTTTGGTTTCTTCCTCGTAAGGAAAACATATATAGGGCATGTTTGGTATAAATTTGGGAAAGGAAATAAATAAGGAAAAGGGTAATGTTAACTGTTACCATTATAAGTTGTTTGATATACCTTGGGAAATTAATCACTCGTAACAAATAGAGGTTGATGAGGGTAACAATTTTGTTACCACATGGTTGGGAGATGTAACAAATGATGGTAATTGTTACCCTTAGGAATCTAAGTAATAACTTTGTGTTTAAACCTTTGCAGCCAGAGAGAGGGACAGCTATTCCAGCATGGGGTGTCTGGAACACTGATCCTCAGCAAGCTGAGGGTTTTACGGGTGCTTTCACAAGGGCTAAAGAGGAGAGGAACACGCCCCTTAACTCGAATGCTCCACAACGCTATCAACAACAACATCAGAGATCACAAGAGGAAAAGGTAATTGTTACATCACTGTACTGTAATCTGCAGTATAATAGATTTTGTTTATAGTCACTAATATTTATTTTGGTTTCTGGTTTAATTTACAGAAGGGATGTTGCTTTGGTTGGTTTTGATAATGATCTTCATCTAGTTGTTTATCCAATATATACGATGAAAGCCAAAGGCATGGATAGTCAAATTAAAGAGCAAAAAAAGGAGGTTGAAGAACAAGAATGATGATTTTCTGACTGTGGGTGTTACTGTGTGCTTTTTCATTTCTTTTTGGGGGGGAGGGTTGGGTGGTTCATTAGTTACTATTTTTGAGGATCCTATATATGATTAAGATTCTTTGAAGTTGTTGGCAAATGTTTTGAAGTAGACTATGGACTTCCCTTTGTAACAATCTTGTTATACATAAATTTGAAGCAAATTTCTTG

mRNA sequence

GAAAGAAAGAGAGAGAATTGTCAAACATTAAACAGTTGTCTTGCCAAGTCAATGGTCTCATACCAAATTGTAGTATACTAAATTATAATTATAATTATAATAACAACCCCCCCTTTCATTTGCAATTTTATTCAATCTTCAAACCCACCTTCCCTCATTATATTTCTTCTTCAACTCCTTTGCTCAATAATTGTTCTTCATCATTTTCCTTGAAAAACCCACCTAATTTCCTCTTATTTTTCTACCTTAATTCTTCATTAGTTTTCATATAATATCCTCTGTTTTCCCAGGTTTTGATATATTTCTAAGTTTGCTGCTTTAATGGCTCAGTCTAAAGTACCCAAGTTTGGTGCGTGGGAAGGTGGAGAAAACTACACAGTTTTCTTCGACAATGCACGAAAGAAGAAGACTAATGGACAGATGATAAACCCGAATGACCCTCAAGACATGGCTGATATGTTTCCACAAATCGGAGGTCCACCACCTCAGGCTCCTAAAGCCGAACCCAAAGGACAACAATCCAAAACCCCTGAATTTGGTGCCTGGGACAATGGAGAGAACGTTGGCTATACCGAGTATTTTGAAAGTAAAAGGAAAACCAAGAACGGTGAACCCACAGCGTCAACAAATGAGCCACAGCTGAACCGAGACATGCATCCTCGTAAGGATCCTCCATCTAAACCAGAAGCAGCACGGGCAAAGGTGCCACCGTTTGGTGGTTGGGAGAATGGAGGTGAAGGTGGTTATACCCAAAGCTTTGAAAATGTTAGGAAGAATAATAATAAGAATGGGCGTACTGTTACACCAGAACCTTCTTCTGACGCCCCTCAGTTGAACCGCGATGTAGGTGAGCCAGCTCCAGCTAAAGAGGGCCGTGCTAAGGTGCCTGAGTTTGGTGGTTGGAATGAGGGAGAAAATGGCGCATACACTGCTTATTTTGAAAATGCTCGGAAAAATAAGAACGCAGGGCCTGTGCCAGACCCTGCTGAGGTCAACAATAGAGCTCGGCCTTCTACTGGTGCTGGAACCAAAAATAAGGCAGATGATCCTCAGTTGAGAAATAATACAAGTAGAGGGTCTAACTATTCTGTGGCTACTTCTGAAGCTCCTTCCAGAAATGGAAAGCAGAACACAGGGGGCCAATCACCAATCCAGCAGAAAGCAGGCAGGCTTCAGCAAAAACCCCCAGCTAGCCGAGGAAGTCAAACTCCAGAGAGAGGGACAGCTATTCCAGCATGGGGTGTCTGGAACACTGATCCTCAGCAAGCTGAGGGTTTTACGGGTGCTTTCACAAGGGCTAAAGAGGAGAGGAACACGCCCCTTAACTCGAATGCTCCACAACGCTATCAACAACAACATCAGAGATCACAAGAGGAAAAGAAGGGATGTTGCTTTGGTTGGTTTTGATAATGATCTTCATCTAGTTGTTTATCCAATATATACGATGAAAGCCAAAGGCATGGATAGTCAAATTAAAGAGCAAAAAAAGGAGGTTGAAGAACAAGAATGATGATTTTCTGACTGTGGGTGTTACTGTGTGCTTTTTCATTTCTTTTTGGGGGGGAGGGTTGGGTGGTTCATTAGTTACTATTTTTGAGGATCCTATATATGATTAAGATTCTTTGAAGTTGTTGGCAAATGTTTTGAAGTAGACTATGGACTTCCCTTTGTAACAATCTTGTTATACATAAATTTGAAGCAAATTTCTTG

Coding sequence (CDS)

ATGGCTCAGTCTAAAGTACCCAAGTTTGGTGCGTGGGAAGGTGGAGAAAACTACACAGTTTTCTTCGACAATGCACGAAAGAAGAAGACTAATGGACAGATGATAAACCCGAATGACCCTCAAGACATGGCTGATATGTTTCCACAAATCGGAGGTCCACCACCTCAGGCTCCTAAAGCCGAACCCAAAGGACAACAATCCAAAACCCCTGAATTTGGTGCCTGGGACAATGGAGAGAACGTTGGCTATACCGAGTATTTTGAAAGTAAAAGGAAAACCAAGAACGGTGAACCCACAGCGTCAACAAATGAGCCACAGCTGAACCGAGACATGCATCCTCGTAAGGATCCTCCATCTAAACCAGAAGCAGCACGGGCAAAGGTGCCACCGTTTGGTGGTTGGGAGAATGGAGGTGAAGGTGGTTATACCCAAAGCTTTGAAAATGTTAGGAAGAATAATAATAAGAATGGGCGTACTGTTACACCAGAACCTTCTTCTGACGCCCCTCAGTTGAACCGCGATGTAGGTGAGCCAGCTCCAGCTAAAGAGGGCCGTGCTAAGGTGCCTGAGTTTGGTGGTTGGAATGAGGGAGAAAATGGCGCATACACTGCTTATTTTGAAAATGCTCGGAAAAATAAGAACGCAGGGCCTGTGCCAGACCCTGCTGAGGTCAACAATAGAGCTCGGCCTTCTACTGGTGCTGGAACCAAAAATAAGGCAGATGATCCTCAGTTGAGAAATAATACAAGTAGAGGGTCTAACTATTCTGTGGCTACTTCTGAAGCTCCTTCCAGAAATGGAAAGCAGAACACAGGGGGCCAATCACCAATCCAGCAGAAAGCAGGCAGGCTTCAGCAAAAACCCCCAGCTAGCCGAGGAAGTCAAACTCCAGAGAGAGGGACAGCTATTCCAGCATGGGGTGTCTGGAACACTGATCCTCAGCAAGCTGAGGGTTTTACGGGTGCTTTCACAAGGGCTAAAGAGGAGAGGAACACGCCCCTTAACTCGAATGCTCCACAACGCTATCAACAACAACATCAGAGATCACAAGAGGAAAAGAAGGGATGTTGCTTTGGTTGGTTTTGA

Protein sequence

MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKAEPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSKPEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAPAKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKADDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERGTAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGWF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10023.1Spo10023.1mRNA


Homology
BLAST of Spo10023.1 vs. NCBI nr
Match: gi|902228608|gb|KNA21186.1| (hypothetical protein SOVF_045740 [Spinacia oleracea])

HSP 1 Score: 731.5 bits (1887), Expect = 7.200e-208
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 1

		  

Query: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60
           MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA
Sbjct: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60

Query: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK 120
           EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK
Sbjct: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK 120

Query: 121 PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP 180
           PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP
Sbjct: 121 PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP 180

Query: 181 AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA 240
           AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA
Sbjct: 181 AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA 240

Query: 241 DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG 300
           DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG
Sbjct: 241 DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG 300

Query: 301 TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW 360
           TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW
Sbjct: 301 TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW 360

Query: 361 F 362
           F
Sbjct: 361 F 361

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|731347565|ref|XP_010685052.1| (PREDICTED: RPM1-interacting protein 4-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 520.0 bits (1338), Expect = 3.300e-144
Identity = 280/378 (74.07%), Postives = 306/378 (80.95%), Query Frame = 1

		  

Query: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60
           MA SKVPKFGAWEGGENYTV+FDNARKKKTNGQMINPNDP++  +MF Q GGP  QA +A
Sbjct: 1   MATSKVPKFGAWEGGENYTVYFDNARKKKTNGQMINPNDPEENPEMFQQNGGPA-QALRA 60

Query: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPS- 120
           +PKGQQ+K P+FGAW+NGENVGYT YFE+KRK KNGEPTAS NEP++NRDM PRKDPP+ 
Sbjct: 61  DPKGQQAKAPQFGAWENGENVGYTAYFENKRKGKNGEPTASQNEPKMNRDMQPRKDPPAQ 120

Query: 121 ------KPEA---ARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQ 180
                 KPE    AR+KVP FG WE  GE GYTQSFENVRKN  KNGRTVTPEPS DAPQ
Sbjct: 121 ARPAPAKPEPQQEARSKVPQFGAWEGAGEAGYTQSFENVRKN--KNGRTVTPEPS-DAPQ 180

Query: 181 LNRDVGEPAPAKEGRAKVPEFGGWNEGENGA-YTAYFENARKNKNAGPVPDPAE------ 240
           LNRDV +P P KEGR KVP+FG W EG+NG  YTAYFENARKNKNAGPV DP +      
Sbjct: 181 LNRDVNDP-PTKEGRQKVPQFGAWEEGDNGGVYTAYFENARKNKNAGPVLDPVDPQLNRD 240

Query: 241 VNNRARPSTGAGTKNKADDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGR 300
           VNNRA+P + AGTKNK DD QLRN  SRGS  SVA S+  SR GKQN GG SPI QKAG+
Sbjct: 241 VNNRAQPPSAAGTKNKVDDHQLRN-ASRGSAPSVAVSDTSSRYGKQNPGGHSPIHQKAGK 300

Query: 301 LQQKPPASRGSQTPERGTAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQ 360
           LQQ+PPA+RGSQTPERG AIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLN N P RYQ
Sbjct: 301 LQQRPPANRGSQTPERGAAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNPNVPPRYQ 360

Query: 361 QQHQRSQEEKKGCCFGWF 362
           QQ +  +  KKGCCFGWF
Sbjct: 361 QQSE--EAGKKGCCFGWF 370

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|870853806|gb|KMT05673.1| (hypothetical protein BVRB_7g168030 isoform C [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 243.4 bits (620), Expect = 6.000e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  

Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|731347567|ref|XP_010685053.1| (PREDICTED: uncharacterized protein LOC104899541 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 243.4 bits (620), Expect = 6.000e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  

Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|870853805|gb|KMT05672.1| (hypothetical protein BVRB_7g168030 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 243.4 bits (620), Expect = 6.000e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  

Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNT7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045740 PE=4 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 5.000e-208
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 1

		  

Query: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60
           MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA
Sbjct: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60

Query: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK 120
           EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK
Sbjct: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK 120

Query: 121 PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP 180
           PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP
Sbjct: 121 PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP 180

Query: 181 AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA 240
           AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA
Sbjct: 181 AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA 240

Query: 241 DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG 300
           DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG
Sbjct: 241 DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG 300

Query: 301 TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW 360
           TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW
Sbjct: 301 TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW 360

Query: 361 F 362
           F
Sbjct: 361 F 361

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C033_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167970 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 2.300e-144
Identity = 280/378 (74.07%), Postives = 306/378 (80.95%), Query Frame = 1

		  

Query: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60
           MA SKVPKFGAWEGGENYTV+FDNARKKKTNGQMINPNDP++  +MF Q GGP  QA +A
Sbjct: 1   MATSKVPKFGAWEGGENYTVYFDNARKKKTNGQMINPNDPEENPEMFQQNGGPA-QALRA 60

Query: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPS- 120
           +PKGQQ+K P+FGAW+NGENVGYT YFE+KRK KNGEPTAS NEP++NRDM PRKDPP+ 
Sbjct: 61  DPKGQQAKAPQFGAWENGENVGYTAYFENKRKGKNGEPTASQNEPKMNRDMQPRKDPPAQ 120

Query: 121 ------KPEA---ARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQ 180
                 KPE    AR+KVP FG WE  GE GYTQSFENVRKN  KNGRTVTPEPS DAPQ
Sbjct: 121 ARPAPAKPEPQQEARSKVPQFGAWEGAGEAGYTQSFENVRKN--KNGRTVTPEPS-DAPQ 180

Query: 181 LNRDVGEPAPAKEGRAKVPEFGGWNEGENGA-YTAYFENARKNKNAGPVPDPAE------ 240
           LNRDV +P P KEGR KVP+FG W EG+NG  YTAYFENARKNKNAGPV DP +      
Sbjct: 181 LNRDVNDP-PTKEGRQKVPQFGAWEEGDNGGVYTAYFENARKNKNAGPVLDPVDPQLNRD 240

Query: 241 VNNRARPSTGAGTKNKADDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGR 300
           VNNRA+P + AGTKNK DD QLRN  SRGS  SVA S+  SR GKQN GG SPI QKAG+
Sbjct: 241 VNNRAQPPSAAGTKNKVDDHQLRN-ASRGSAPSVAVSDTSSRYGKQNPGGHSPIHQKAGK 300

Query: 301 LQQKPPASRGSQTPERGTAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQ 360
           LQQ+PPA+RGSQTPERG AIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLN N P RYQ
Sbjct: 301 LQQRPPANRGSQTPERGAAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNPNVPPRYQ 360

Query: 361 QQHQRSQEEKKGCCFGWF 362
           QQ +  +  KKGCCFGWF
Sbjct: 361 QQSE--EAGKKGCCFGWF 370

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0G9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168030 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.200e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  

Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ERG5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168030 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.200e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  

Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWW1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168030 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.200e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  

Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

BLAST of Spo10023.1 vs. ExPASy Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.000e-8
Identity = 54/206 (26.21%), Postives = 96/206 (46.60%), Query Frame = 1

		  

Query: 185 RAKVPEFGGWNEGENGAYTAYFENARKNKNAGPV---PDPAEVNNRAR---PSTGAGTKN 244
           R+ VP+FG W   EN  YTAYF+ ARK +  G     P+  E N+ ++   P     ++ 
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRT 62

Query: 245 K----------------ADDPQLRNNTSRGSNYSVATSEAPSRNGKQNT-GGQSPIQQKA 304
           K                 ++ +L+     G + + A ++   R  + N+   +SP+ + +
Sbjct: 63  KPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNS 122

Query: 305 ----GRLQQKPPASRGSQTPERGTAIPAWGVWN-TDPQQAEGFTGAFTRAKEERNTPLNS 361
               G+ + KP   R  ++PE+ T +P +G W+  +P  A+G+T  F + +EER++  N 
Sbjct: 123 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 182

BLAST of Spo10023.1 vs. TAIR (Arabidopsis)
Match: AT3G25070.1 (RPM1 interacting protein 4)

HSP 1 Score: 61.6 bits (148), Expect = 1.100e-9
Identity = 54/206 (26.21%), Postives = 96/206 (46.60%), Query Frame = 1

		  

Query: 185 RAKVPEFGGWNEGENGAYTAYFENARKNKNAGPV---PDPAEVNNRAR---PSTGAGTKN 244
           R+ VP+FG W   EN  YTAYF+ ARK +  G     P+  E N+ ++   P     ++ 
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRT 62

Query: 245 K----------------ADDPQLRNNTSRGSNYSVATSEAPSRNGKQNT-GGQSPIQQKA 304
           K                 ++ +L+     G + + A ++   R  + N+   +SP+ + +
Sbjct: 63  KPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNS 122

Query: 305 ----GRLQQKPPASRGSQTPERGTAIPAWGVWN-TDPQQAEGFTGAFTRAKEERNTPLNS 361
               G+ + KP   R  ++PE+ T +P +G W+  +P  A+G+T  F + +EER++  N 
Sbjct: 123 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 182

The following BLAST results are available for this feature:
BLAST of Spo10023.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902228608|gb|KNA21186.1|7.2e-208100.hypothetical protein SOVF_0457... [more]
gi|731347565|ref|XP_010685052.1|3.3e-14474.0PREDICTED: RPM1-interacting pr... [more]
gi|870853806|gb|KMT05673.1|6.0e-6159.9hypothetical protein BVRB_7g16... [more]
gi|731347567|ref|XP_010685053.1|6.0e-6159.9PREDICTED: uncharacterized pro... [more]
gi|870853805|gb|KMT05672.1|6.0e-6159.9hypothetical protein BVRB_7g16... [more]
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BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RNT7_SPIOL5.0e-208100.Uncharacterized protein OS=Spi... [more]
A0A0J8C033_BETVU2.3e-14474.0Uncharacterized protein OS=Bet... [more]
A0A0J8C0G9_BETVU4.2e-6159.9Uncharacterized protein OS=Bet... [more]
A0A0J8ERG5_BETVU4.2e-6159.9Uncharacterized protein OS=Bet... [more]
A0A0J8BWW1_BETVU4.2e-6159.9Uncharacterized protein OS=Bet... [more]
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BLAST of Spo10023.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RIN4_ARATH2.0e-826.2RPM1-interacting protein 4 OS=... [more]
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BLAST of Spo10023.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G25070.11.1e-926.2RPM1 interacting protein 4[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 3..29
score: 1.4E-5coord: 297..332
score: 2.6
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 1..66
score: 2.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050896 response to stimulus
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0016310 phosphorylation
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0050832 defense response to fungus
biological_process GO:0006629 lipid metabolic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0002213 defense response to insect
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0016020 membrane
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0016301 kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0005524 ATP binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0004601 peroxidase activity
RNA-Seq Expression