Spo10096 (gene)

Overview
NameSpo10096
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionATP-dependent Clp protease adaptor protein ClpS
Locationchr2 : 40815883 .. 40819258 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCCATAATAAAATCATAATTGTGGACAAAATTGTACCTACCATTATGTGATTCGCAATTTGGCAGCAACTGATAACGTTAAACAACGCAAATTTTCATCCACAAATCAACCAAATCAAACACTCGATCACTTCTCTATATTACTCCGTATAAGTTTATATAACCCACCAACAATTTCACAATATTCAGGGTTTGACACAATTTCACAACTGTTTCTGGGTTTTATCTTTCAGGGTTTTTCTGTGTGTTCAACTCTGCAAGCTGAAAAAATGGCATCTTCATCAATTTCTTTCTTAGCAGGCACAACTACAACAACACCATCAGGCCTACTTTCCCATTTCAAAAGTTCAAAAGCTATGCCTTCTAACCTGAGAATGGAGGGGACAGAAAATGAGGGGTTTAGTGTTGCTTCAATGGCTGTTGGAGTGAAATCAAGATTTGGGTCTCTTCGAGGTGGTGGTGCTGTTTTGGAACGACCCACTTTTGATCAGTCCCAATTTGACCCTTCAACCCAAGTTCAAGAAGGTAGTCTTTCAATTTTGTTTGTGTTTCTTGGTTTTTGCATTTTTTTTCATTTGCTCTTAATTTGGTCCATTTGTTATTTGTGTAATTCACCTCAAATGGGATTCTTATTTGTATAGTTTGGTCCATTTGTTAGTTGAATTCGGGTTTGTCGAATTTAGGTTATTGGGTTTTGTTGAATGTCTTATTACTGCTGCTTCAATTTTGTTTGTGTTCCCTGATTTTTGCATGCACTCTATTTGGTGTGTTTGTTGTATTGCAATGTTCTTCTTGTAATTCACTTCAAATGGGATTCTTCGTGTGACCGTTTGATACAAGAATTTGCTAAATTGTGTAACCGGGTTTGGTTAAATTCAGCTTTTTGGGAGTGGGTTACCGCATTTGGTTGAATGTCTTATGATTAGTTGATTACTGTTTAACTATTAAGAGTAAACTGTTCTGTTTGTGGATAGATAATGATAATTGAATTAATGGTCAGTTTTTTTACTCATTGTTTAATTGATACAATTACAAGGATTCTTTTGTCTTGAATCATGAAATGTTGTTATAGCCTTATATTAGCACTTTAGCAGCGTTTACTAGTTATATATTTTCCTGTATCCGTGTACAAGTTGTAATTCGTACATGGAAGATTGGAAGTGTAGCTATTGGTGAATAACTTGTTTATATTTTGTAGGAGGAGACATTGGACGGGTAAAGGATAAGAGAGGTAACAGAAGTGGAGACAGTTACAGAGTTTTGTTGCTTGATGATGAACGCCACACGGAAAATCTTGGTAAGCAAAAGTTGCATTCTGTACATCGATGAATTCAACATAATTTATGGTGATTATGTCTTTTGAAATTTTTGGTTCTAAGTTGTGCTGTCCTTTTATGTATAGTTTTGAAGGTGTTGCCTCAAGCCGTTCCATCCGTCACTCCAGACGATGCAAGAAGAATCTACAGTGCATCACGGGAAAATGGTGTTGCAGTGGTTATAGTGACAGTGAAGGTATGCTAGTCTCTGTAATCTACACCTTTTGCTTCTCTTCCAGTCGCTCCTTGTTCTTTTTTCTTAAAGTTTCATCAGATAATACAATAGTAATTAAAAATGTTTTCTTGAAAAATACACAATGACATTTTGGTGTCACAATGCTCTAAGCATTTCTTTCAATACCCAAATACTATCTGGCAGTTGGGTTCTGATGTATGTTTCAATCACAATGTGAATGCTTGTATTTGCGACCAAATTTGACCTAAACATGGAAACTGTCTAAAAGTTTTTAATTGTATATAAATGTGGGCATTGGGAACCAGATATGGGTTGTCACAAAGTGTGTACTCCGTATGTCTTTAGGAACTAGTCTTTTCAATCAGTTGTAGAGATTTGATGTTTTGGGGTTTGTTTTGGATAGTTTAAAACCAAGTTTTTCTTTATGTTTGGCCAAAAAAATGCTCTTTTCCGCTACTCCTCTGATAATTTGGTGAAGAAGAGGAAACTCGAACTAGCACAATATTTTGAACATTGCACAGAAATTCAGAGGCAGCATAGAGCTGAACTACTACTTTTTCCTACAAGTTTTCTATAATTTTCAACTTCAAGATTTTATAGAATAGCTTTGTGTTGGAAGAGAATTTTATTTAAAGGTGATGTATAATAACATCGGAGTAAAAGTGAAGTCAAAATGTTTAGAAGTTATCTATTTGTTATTTGACTCTGGGTATAATGTAAAAGTTATCTATTTTCCAGTGATAAAAATTTTCGCTTTAATAAAAATTATCCATTCAAAATCATTCATAGTGTATAAAAGTAACTATGTAACCATTTAAAATGCTTATCCATCAAAAAAAATTATAATATAAAAGTTAATCACGAATTACTTGGGCTTTCTTCTACAATCTGCTGGCAGGTACAAGCTACAGTTTCTCACTACAAGGGTAGCTAAGAGAACCTAGTTCACAAGTTAAAAATTATCTGAAGTTCTGAACCTACGAATCAAGATTGTCTTTCATTTTTTTGCAACTAATTAAAAGTATTGAAAACCCTAGCTTATAAATAATTCAGGATCATGCTGTTCGGAGGTTGCTTCTGTCTTATCTAACTCTATAGTCTGTCAAAAACTTGTAAACTGTGATCTGAATTCTGAAGTTTTCCATAGTATGTGTTAAGCTGTAAATACAACTATTATAGAAGACATCTAGTGTATGCCAAAGCAAGTGAAAACCAAATACTATTGTGTTCATTAAGGTTGTTAATTATGAGATTTTCAGTCATGCTTGACTGTTGAGTGTTGACGTATAGTTGTATAAAAGACATTTGATGTGCAGAGCTCCAGGGAGTAGTGTTGAGGTGTCAAGGAAATTGAGCTCTTGATCCTGATAGAATATTTAAATATTTGTTTACACATCAAGAATGTTAACAATTGGTGAGCTGAAAAGATGCATGCCATACAATTTCAACGAGATGGGAGATGTTAGAGTTTTAGACACCTACTCAAATCATTTAATCACCAATCCATGATCTAAGTACCAACTCAATATTGATAAGATTATGCTTATAGTTTTTCTGGCTTCCTTTTTTATTTCCCCGATGGTGGGAGGGTGGTGGGTGGTTGTGTGTTAGCCAGCTATTCCCTTATTGCTTGAACTATCTGTGGTGTTTTAAACTTTTGGGTTGCAGAATAGTCATGAATACTCTAATGAAGTTTAAAGTACTCTGTAGTGGGTTCTGAGTCTTCTGACTTCCAGTGTCGCACTCTAACTAAAGCGTTATAACACTTGTTTTGGTTGACAGGAGCATGCCGAATTTTACTCTCAAATGATGATCCGGGGGGGTCTACAGTCGTCTATTGAACCAGACTCAAATATTGTTTGA

mRNA sequence

AACCCATAATAAAATCATAATTGTGGACAAAATTGTACCTACCATTATGTGATTCGCAATTTGGCAGCAACTGATAACGTTAAACAACGCAAATTTTCATCCACAAATCAACCAAATCAAACACTCGATCACTTCTCTATATTACTCCGTATAAGTTTATATAACCCACCAACAATTTCACAATATTCAGGGTTTGACACAATTTCACAACTGTTTCTGGGTTTTATCTTTCAGGGTTTTTCTGTGTGTTCAACTCTGCAAGCTGAAAAAATGGCATCTTCATCAATTTCTTTCTTAGCAGGCACAACTACAACAACACCATCAGGCCTACTTTCCCATTTCAAAAGTTCAAAAGCTATGCCTTCTAACCTGAGAATGGAGGGGACAGAAAATGAGGGGTTTAGTGTTGCTTCAATGGCTGTTGGAGTGAAATCAAGATTTGGGTCTCTTCGAGGTGGTGGTGCTGTTTTGGAACGACCCACTTTTGATCAGTCCCAATTTGACCCTTCAACCCAAGTTCAAGAAGGAGGAGACATTGGACGGGTAAAGGATAAGAGAGGTAACAGAAGTGGAGACAGTTACAGAGTTTTGTTGCTTGATGATGAACGCCACACGGAAAATCTTGTTTTGAAGGTGTTGCCTCAAGCCGTTCCATCCGTCACTCCAGACGATGCAAGAAGAATCTACAGTGCATCACGGGAAAATGGTGTTGCAGTGGTTATAGTGACAGTGAAGGAGCATGCCGAATTTTACTCTCAAATGATGATCCGGGGGGGTCTACAGTCGTCTATTGAACCAGACTCAAATATTGTTTGA

Coding sequence (CDS)

ATGGCATCTTCATCAATTTCTTTCTTAGCAGGCACAACTACAACAACACCATCAGGCCTACTTTCCCATTTCAAAAGTTCAAAAGCTATGCCTTCTAACCTGAGAATGGAGGGGACAGAAAATGAGGGGTTTAGTGTTGCTTCAATGGCTGTTGGAGTGAAATCAAGATTTGGGTCTCTTCGAGGTGGTGGTGCTGTTTTGGAACGACCCACTTTTGATCAGTCCCAATTTGACCCTTCAACCCAAGTTCAAGAAGGAGGAGACATTGGACGGGTAAAGGATAAGAGAGGTAACAGAAGTGGAGACAGTTACAGAGTTTTGTTGCTTGATGATGAACGCCACACGGAAAATCTTGTTTTGAAGGTGTTGCCTCAAGCCGTTCCATCCGTCACTCCAGACGATGCAAGAAGAATCTACAGTGCATCACGGGAAAATGGTGTTGCAGTGGTTATAGTGACAGTGAAGGAGCATGCCGAATTTTACTCTCAAATGATGATCCGGGGGGGTCTACAGTCGTCTATTGAACCAGACTCAAATATTGTTTGA

Protein sequence

MASSSISFLAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSLRGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVLKVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNIV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10096.1Spo10096.1mRNA


Homology
[Close]
BLAST of Spo10096.1 vs. NCBI nr
Match: gi|902161223|gb|KNA06547.1| (hypothetical protein SOVF_180020 [Spinacia oleracea])

HSP 1 Score: 347.8 bits (891), Expect = 1.100e-92
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MASSSISFLAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSL 60
           MASSSISFLAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSL
Sbjct: 1   MASSSISFLAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSL 60

Query: 61  RGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVL 120
           RGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVL
Sbjct: 61  RGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVL 120

Query: 121 KVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNI 180
           KVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNI
Sbjct: 121 KVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNI 180

Query: 181 V 182
           V
Sbjct: 181 V 181
[Close]
BLAST of Spo10096.1 vs. NCBI nr
Match: gi|731354784|ref|XP_010688785.1| (PREDICTED: uncharacterized protein LOC104902634 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 266.2 bits (679), Expect = 4.300e-68
Identity = 147/192 (76.56%), Postives = 158/192 (82.29%), Query Frame = 1 

		  

Query: 1   MASSSISFLAGTTTTTPSGLL---------SHFKSSKAMPSNLRM--EGTENEGFSVASM 60
           MASS+  FLAGTTT + S  L         S+ K SK  P  L+M  E  ENEGF V+SM
Sbjct: 1   MASSAAPFLAGTTTPSKSNCLGLRHVIVPLSNLKVSKFNPLKLKMKMEERENEGFCVSSM 60

Query: 61  AVGVKSRFGSLRGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLL 120
           +VGVK+RFGSLRGGGAVLERPTFDQSQFDPSTQVQEGGDIGRV+DKR   SGDSYRVLLL
Sbjct: 61  SVGVKARFGSLRGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVRDKRSTGSGDSYRVLLL 120

Query: 121 DDERHTENLVLKVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGG 180
           DDERH+E LVLKVLPQAVPSVTPDDARRI+S SR+NGVAVVIVTVKEHAEFYSQMMIRGG
Sbjct: 121 DDERHSEKLVLKVLPQAVPSVTPDDARRIFSESRQNGVAVVIVTVKEHAEFYSQMMIRGG 180

Query: 181 LQSSIEPDSNIV 182
           L SSIEPDS  V
Sbjct: 181 LLSSIEPDSQTV 192
[Close]
BLAST of Spo10096.1 vs. NCBI nr
Match: gi|590655761|ref|XP_007034078.1| (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein [Theobroma cacao])

HSP 1 Score: 208.0 bits (528), Expect = 1.400e-50
Identity = 111/179 (62.01%), Postives = 138/179 (77.09%), Query Frame = 1 

		  

Query: 6   ISFLAGTTTTTPSGL--LSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSLRGG 65
           ++ +AGT TT+   L  L H  S+     +    G +N G  + S  +GVK++FGS + G
Sbjct: 1   MAVVAGTATTSSFTLVKLQHLPSAPTWRKS--GVGKQNPGGKLGSKFMGVKAKFGSFKSG 60

Query: 66  GA-VLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVLKV 125
           GA VLERP+ DQSQFDPS QV EGGDIGR++DK+G   GDSYRVLL+DD RH+ENLV KV
Sbjct: 61  GAGVLERPSLDQSQFDPSAQVLEGGDIGRLRDKKGTGRGDSYRVLLIDDTRHSENLVAKV 120

Query: 126 LPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNIV 182
           LPQ VPSVTPD AR+++  SRENGVAVVIVTVKEHAEFYSQMM+RGGL+S+IEPDS+++
Sbjct: 121 LPQIVPSVTPDGARKLFHVSRENGVAVVIVTVKEHAEFYSQMMVRGGLRSTIEPDSSVL 177
[Close]
BLAST of Spo10096.1 vs. NCBI nr
Match: gi|470123504|ref|XP_004297765.1| (PREDICTED: uncharacterized protein LOC101299180 [Fragaria vesca subsp. vesca])

HSP 1 Score: 205.7 bits (522), Expect = 6.900e-50
Identity = 114/178 (64.04%), Postives = 133/178 (74.72%), Query Frame = 1 

		  

Query: 2   ASSSISFLAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSLR 61
           AS S++ +AG   ++P+   S   + K           E  G S     + VK+RFGS R
Sbjct: 7   ASFSLTKIAGFPPSSPTRSCSKVLAVK-----------EGRGISGG---MAVKARFGSSR 66

Query: 62  GGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVLK 121
           GG  VLERP FDQ+QFDPSTQ+QEGGDIGR+KDKRG  SGDSYRVLL+DD +HTE LV K
Sbjct: 67  GGAGVLERPKFDQTQFDPSTQLQEGGDIGRLKDKRGIGSGDSYRVLLIDDVQHTEKLVAK 126

Query: 122 VLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSN 180
           VLPQAVPSVTPD AR ++  SRE+GVAVV+VTVKEHAEFYSQMMIRGGL+SSIEPDSN
Sbjct: 127 VLPQAVPSVTPDGARELFHKSREDGVAVVVVTVKEHAEFYSQMMIRGGLRSSIEPDSN 170
[Close]
BLAST of Spo10096.1 vs. NCBI nr
Match: gi|596203460|ref|XP_007223749.1| (hypothetical protein PRUPE_ppa010524mg [Prunus persica])

HSP 1 Score: 203.4 bits (516), Expect = 3.400e-49
Identity = 113/179 (63.13%), Postives = 129/179 (72.07%), Query Frame = 1 

		  

Query: 9   LAGTTTTTPSGLLSHFKSSKAMPSNLRM--------EGTENEGFSVASMAVGVKSRFGSL 68
           L G  TTT S  L+        PS  R         EG E          + VK+RFGS 
Sbjct: 69  LTGGATTTSSFSLTRIVGFPPPPSPSRSCSRILGVKEGQERWR---GGNGMAVKARFGSS 128

Query: 69  RGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVL 128
           +GG  VLERP FDQSQFDP+TQ+++GGDIGR+K+KRG  SGDSYRVLL+DD RHTE LV 
Sbjct: 129 KGGAGVLERPKFDQSQFDPATQLEQGGDIGRLKEKRGIGSGDSYRVLLVDDVRHTEKLVA 188

Query: 129 KVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSN 180
           KV+PQ VPSVTPDDAR ++  SRENGVAVVIVTVKEHAEFYSQMMIRGGL+S+IEPDSN
Sbjct: 189 KVVPQVVPSVTPDDARGLFLKSRENGVAVVIVTVKEHAEFYSQMMIRGGLRSTIEPDSN 244
[Close]
BLAST of Spo10096.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QH27_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180020 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 7.800e-93
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MASSSISFLAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSL 60
           MASSSISFLAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSL
Sbjct: 1   MASSSISFLAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSL 60

Query: 61  RGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVL 120
           RGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVL
Sbjct: 61  RGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVL 120

Query: 121 KVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNI 180
           KVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNI
Sbjct: 121 KVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNI 180

Query: 181 V 182
           V
Sbjct: 181 V 181
[Close]
BLAST of Spo10096.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BRR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g203610 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.000e-68
Identity = 147/192 (76.56%), Postives = 158/192 (82.29%), Query Frame = 1 

		  

Query: 1   MASSSISFLAGTTTTTPSGLL---------SHFKSSKAMPSNLRM--EGTENEGFSVASM 60
           MASS+  FLAGTTT + S  L         S+ K SK  P  L+M  E  ENEGF V+SM
Sbjct: 1   MASSAAPFLAGTTTPSKSNCLGLRHVIVPLSNLKVSKFNPLKLKMKMEERENEGFCVSSM 60

Query: 61  AVGVKSRFGSLRGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLL 120
           +VGVK+RFGSLRGGGAVLERPTFDQSQFDPSTQVQEGGDIGRV+DKR   SGDSYRVLLL
Sbjct: 61  SVGVKARFGSLRGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVRDKRSTGSGDSYRVLLL 120

Query: 121 DDERHTENLVLKVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGG 180
           DDERH+E LVLKVLPQAVPSVTPDDARRI+S SR+NGVAVVIVTVKEHAEFYSQMMIRGG
Sbjct: 121 DDERHSEKLVLKVLPQAVPSVTPDDARRIFSESRQNGVAVVIVTVKEHAEFYSQMMIRGG 180

Query: 181 LQSSIEPDSNIV 182
           L SSIEPDS  V
Sbjct: 181 LLSSIEPDSQTV 192
[Close]
BLAST of Spo10096.1 vs. UniProtKB/TrEMBL
Match: A0A061ERQ2_THECC (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein OS=Theobroma cacao GN=TCM_020128 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.700e-51
Identity = 111/179 (62.01%), Postives = 138/179 (77.09%), Query Frame = 1 

		  

Query: 6   ISFLAGTTTTTPSGL--LSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSLRGG 65
           ++ +AGT TT+   L  L H  S+     +    G +N G  + S  +GVK++FGS + G
Sbjct: 1   MAVVAGTATTSSFTLVKLQHLPSAPTWRKS--GVGKQNPGGKLGSKFMGVKAKFGSFKSG 60

Query: 66  GA-VLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVLKV 125
           GA VLERP+ DQSQFDPS QV EGGDIGR++DK+G   GDSYRVLL+DD RH+ENLV KV
Sbjct: 61  GAGVLERPSLDQSQFDPSAQVLEGGDIGRLRDKKGTGRGDSYRVLLIDDTRHSENLVAKV 120

Query: 126 LPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSNIV 182
           LPQ VPSVTPD AR+++  SRENGVAVVIVTVKEHAEFYSQMM+RGGL+S+IEPDS+++
Sbjct: 121 LPQIVPSVTPDGARKLFHVSRENGVAVVIVTVKEHAEFYSQMMVRGGLRSTIEPDSSVL 177
[Close]
BLAST of Spo10096.1 vs. UniProtKB/TrEMBL
Match: M5XTN3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010524mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.400e-49
Identity = 113/179 (63.13%), Postives = 129/179 (72.07%), Query Frame = 1 

		  

Query: 9   LAGTTTTTPSGLLSHFKSSKAMPSNLRM--------EGTENEGFSVASMAVGVKSRFGSL 68
           L G  TTT S  L+        PS  R         EG E          + VK+RFGS 
Sbjct: 69  LTGGATTTSSFSLTRIVGFPPPPSPSRSCSRILGVKEGQERWR---GGNGMAVKARFGSS 128

Query: 69  RGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVL 128
           +GG  VLERP FDQSQFDP+TQ+++GGDIGR+K+KRG  SGDSYRVLL+DD RHTE LV 
Sbjct: 129 KGGAGVLERPKFDQSQFDPATQLEQGGDIGRLKEKRGIGSGDSYRVLLVDDVRHTEKLVA 188

Query: 129 KVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPDSN 180
           KV+PQ VPSVTPDDAR ++  SRENGVAVVIVTVKEHAEFYSQMMIRGGL+S+IEPDSN
Sbjct: 189 KVVPQVVPSVTPDDARGLFLKSRENGVAVVIVTVKEHAEFYSQMMIRGGLRSTIEPDSN 244
[Close]
BLAST of Spo10096.1 vs. UniProtKB/TrEMBL
Match: A9PHW1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s14480g PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.300e-47
Identity = 98/134 (73.13%), Postives = 116/134 (86.57%), Query Frame = 1 

		  

Query: 48  SMAVGVKSRFGSLRGGGAVLERPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVL 107
           +M+ G+  +    +GG  VLERPTFDQSQFDPS+QV EGGDIGR++DKRG  SGDSYRVL
Sbjct: 45  TMSTGLTVKASFTKGGPGVLERPTFDQSQFDPSSQVLEGGDIGRLRDKRGVGSGDSYRVL 104

Query: 108 LLDDERHTENLVLKVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIR 167
           L+DD RH+E+LV KVLP+AVPSVTP+DAR+++  SRENGVAVVIVTVKEHAEFYSQMMIR
Sbjct: 105 LIDDSRHSESLVAKVLPRAVPSVTPEDARKLFHESRENGVAVVIVTVKEHAEFYSQMMIR 164

Query: 168 GGLQSSIEPDSNIV 182
           GGL+S IEPDS+ V
Sbjct: 165 GGLRSVIEPDSSNV 178
[Close]
BLAST of Spo10096.1 vs. ExPASy Swiss-Prot
Match: CLPS_GLOVI (ATP-dependent Clp protease adapter protein ClpS OS=Gloeobacter violaceus (strain PCC 7421) GN=clpS PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.100e-10
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1 

		  

Query: 104 YRVLLLDDERHTENLVLKVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQ 163
           Y+VLL +D+    N V++VL + +P + P  AR+I   +   GVAVVIV   EHAEFYS+
Sbjct: 19  YKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNGGVAVVIVCALEHAEFYSE 78

Query: 164 MMIRGGLQSSIEPD 178
            + R  L S+ EPD
Sbjct: 79  SLNRHNLTSTYEPD 92
[Close]
BLAST of Spo10096.1 vs. ExPASy Swiss-Prot
Match: CLPS_SYNE7 (ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus elongatus (strain PCC 7942) GN=clpS PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.500e-7
Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 1 

		  

Query: 104 YRVLLLDDERHTENLVLKVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQ 163
           YRVLL +D+ +    V+ VL Q VPS+T   A  I   +  NG  +VI    E AEFY +
Sbjct: 21  YRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCDIEPAEFYCE 80

Query: 164 MMIRGGLQSSIEPD 178
            +   GL SSIEPD
Sbjct: 81  QLKSHGLSSSIEPD 94
[Close]
BLAST of Spo10096.1 vs. ExPASy Swiss-Prot
Match: CLPS1_ARATH (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Arabidopsis thaliana GN=CPLS1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.400e-7
Identity = 45/169 (26.63%), Postives = 74/169 (43.79%), Query Frame = 1 

		  

Query: 9   LAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSLRGGGAVLE 68
           + G     PS L +     K + S         +G  V    +   S   +L  GG VL+
Sbjct: 5   ICGRLALAPSSLFNSKSGDKHLVS---------KGPCVNRSILMTLSTSAALGKGGGVLD 64

Query: 69  RPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVLKVLPQAVP 128
           +P  +++           G       ++  +    YRV+L +D  +    V++VL + +P
Sbjct: 65  KPIIEKTT---------PGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMKVIP 124

Query: 129 SVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPD 178
            +T D+A  I   +  NG+AVVIV  +  AE +   +   GL SS+EPD
Sbjct: 125 GMTVDNAVNIMQEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPD 155
[Close]
BLAST of Spo10096.1 vs. ExPASy Swiss-Prot
Match: CLPS_PROM5 (ATP-dependent Clp protease adapter protein ClpS OS=Prochlorococcus marinus (strain MIT 9515) GN=clpS PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.000e-6
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 1 

		  

Query: 104 YRVLLLDDERHTENLVLKVLPQAVPSVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQ 163
           Y+VLL +D  ++   +   L + VP ++  DA  I   +  NGV +VIV   E AEFYS+
Sbjct: 31  YKVLLHNDPVNSMEYITIALREVVPQLSEQDAIAIMLEAHNNGVGLVIVCDLEPAEFYSE 90

Query: 164 MMIRGGLQSSIEPD 178
            +   G+ SSIE D
Sbjct: 91  SLKSKGISSSIEKD 104
[Close]
BLAST of Spo10096.1 vs. TAIR (Arabidopsis)
Match: AT1G68660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein)

HSP 1 Score: 55.1 bits (131), Expect = 5.300e-8
Identity = 45/169 (26.63%), Postives = 74/169 (43.79%), Query Frame = 1 

		  

Query: 9   LAGTTTTTPSGLLSHFKSSKAMPSNLRMEGTENEGFSVASMAVGVKSRFGSLRGGGAVLE 68
           + G     PS L +     K + S         +G  V    +   S   +L  GG VL+
Sbjct: 5   ICGRLALAPSSLFNSKSGDKHLVS---------KGPCVNRSILMTLSTSAALGKGGGVLD 64

Query: 69  RPTFDQSQFDPSTQVQEGGDIGRVKDKRGNRSGDSYRVLLLDDERHTENLVLKVLPQAVP 128
           +P  +++           G       ++  +    YRV+L +D  +    V++VL + +P
Sbjct: 65  KPIIEKTT---------PGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMKVIP 124

Query: 129 SVTPDDARRIYSASRENGVAVVIVTVKEHAEFYSQMMIRGGLQSSIEPD 178
            +T D+A  I   +  NG+AVVIV  +  AE +   +   GL SS+EPD
Sbjct: 125 GMTVDNAVNIMQEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPD 155
The following BLAST results are available for this feature:
BLAST of Spo10096.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902161223|gb|KNA06547.1|1.1e-92100.hypothetical protein SOVF_1800... [more]
gi|731354784|ref|XP_010688785.1|4.3e-6876.5PREDICTED: uncharacterized pro... [more]
gi|590655761|ref|XP_007034078.1|1.4e-5062.0Ribosomal protein L12/ ATP-dep... [more]
gi|470123504|ref|XP_004297765.1|6.9e-5064.0PREDICTED: uncharacterized pro... [more]
gi|596203460|ref|XP_007223749.1|3.4e-4963.1hypothetical protein PRUPE_ppa... [more]
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BLAST of Spo10096.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QH27_SPIOL7.8e-93100.Uncharacterized protein OS=Spi... [more]
A0A0J8BRR4_BETVU3.0e-6876.5Uncharacterized protein OS=Bet... [more]
A0A061ERQ2_THECC9.7e-5162.0Ribosomal protein L12/ ATP-dep... [more]
M5XTN3_PRUPE2.4e-4963.1Uncharacterized protein OS=Pru... [more]
A9PHW1_POPTR1.3e-4773.1Uncharacterized protein OS=Pop... [more]
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BLAST of Spo10096.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CLPS_GLOVI1.1e-1045.9ATP-dependent Clp protease ada... [more]
CLPS_SYNE72.5e-744.5ATP-dependent Clp protease ada... [more]
CLPS1_ARATH9.4e-726.6ATP-dependent Clp protease ada... [more]
CLPS_PROM58.0e-639.1ATP-dependent Clp protease ada... [more]
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BLAST of Spo10096.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G68660.15.3e-826.6Ribosomal protein L12/ ATP-dep... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 102..165
score: 1.
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 95..177
score: 4.3
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeunknownSSF54736ClpS-likecoord: 100..176
score: 7.85
NoneNo IPR availablePANTHERPTHR33473FAMILY NOT NAMEDcoord: 59..181
score: 8.1
NoneNo IPR availablePANTHERPTHR33473:SF1ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPScoord: 59..181
score: 8.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030163 protein catabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0009058 biosynthetic process
biological_process GO:0016049 cell growth
biological_process GO:0016043 cellular component organization
biological_process GO:0048869 cellular developmental process
biological_process GO:0060560 developmental growth involved in morphogenesis
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0010015 root morphogenesis
biological_process GO:0008152 metabolic process
cellular_component GO:0009536 plastid
cellular_component GO:0005840 ribosome
molecular_function GO:0008233 peptidase activity
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
RNA-Seq Expression