Spo10122 (gene) | SpinachBase

Overview


Name	Spo10122
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA pseudouridine synthase
Location	SpoScf_00987 : 58101 .. 74146 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTAGTTATTTTTTATGTATTATGGAAAGTTGAGTAGGTTTGGAATTTCTTCAAAAATACGACTGTAAGACTCGTAAGAGTTTGACTCATTTACTAAACCCCACCGCACTTGAGAAACAGGGAATGGCAGGACCTTCCTTTCTCCGGCAAATTCTCCGTTCTTCAGCAGCCTCCGCCGCCACAAAAACCGAAAATTTGTTCAAACAACCACGCTACCATTTCGCCTCTGCCGCCGTTAAAGAGGAAACTCATGAGTTAACGGAGAAGAACGATAGTGGTGGGAGAGGCAAAGGAAAGTGGGTAACTTTACCGCCGTTTACCTCAACCGTTAACACTGACTCGCTTGGTAGAAGACTAAGCCGCCGGGATATCGAAGAAGCGAATGAGTCCATTAAAACGACGACGTCTGCTCTGAAATGGGTTATTCGTTGCTGTCCTCATCTCCCTCAATCACTTGTCCAGAAACTCTTTCGTCTTAGACAGGTTTGTTTTTCAATCTTTAAAAAATACGGAGTACGAATTAATTGTAAATTAAAGCATTTTTGCTCACAAAAAGTTGATTAATGTTTCCAATAATGTTTGATTTATGTGACTGTGTGAGGTATCCATTATTCTCTTGCTTATTGAATTTAATATAAAAGCAAAATTTGTGCAATGTTATTGGAACAATCAAGCAAATTGACTCTTTTGATAGTGCGGGAAAATGATATGTTATGCTCCATATAGACATATAGTAATGCTTTGGATGTTTTAAGGAAATTATGTAATGTCCCTAATTGTGAGCAGCTATAAGTCTTTGAACTATGTGACGATTATTTCGGGATAGAGGGAGTATTCGAAATTTGTTTTAGGCATAGGGAATACTCCATGATCACCTTAAAAATAAGAACAAGAGCAAGTGTGTGTGAGGGGGTATTATTGGGAATATTATTGCTTCAAAAATATTCACTGTTTGAGGCTGTGGCAGGTTAGAAGAGAATGTTTAGAAGGAGACGTGTACAGCAGCGGTGATGCCCAAGAATTCAGGCTAAAAAGGGTAACTTTAATGAGATAGCTCATGTATTTTGTATAATTGTATGTGCCTTCAATGATTATTGTTGTTAAGTGCCCATCGCAATTTTATTCTGAGGATCAGTTTCAATATTTTTTGGAAGGTGGGAGCTAAGGACTCGATGAATAAAGGAGAGCGTATCTTTCTTCCTATATCTGTACAAGGATCATCACCTGTCAAGAAGCAGCCGAAGTATGAGTGCAGCGAAGCAGAAATGAATTTCATTCGCAGCCTTGAGTTGTATAAGGTGGGAGTTGAATTTGAATTTTGGTTGTTGTATTTTGTGTTTCACTTAGATAACGACTCTTATTACGTTGTCAAATCAGGATTCTGCCATTATTGCCATCAATAAACCCCCGAAACTGCCAGTACAGGTAATGGGCAGGTATACCATGTACATCTTTGTAATTTCTGCTTTGGAATGTAAGAAACTGAGCATCCTTGCTTCATTCTTACTGGGTTCAACATTCTTCAGGGTGGCCTTGGGATCAAAAAGAGTTTAGATGAACTGGCTGCTACAAGTCTCAGATATGACGTTATGGAACCTCCCAGGCTGGTGAGTTATTCATGAAATTCTTTTGTTGTTCTTACTGTGGATTTAAATAATTACATAGTACCTTAAGTGCTGCCATAGGAAGCACAGTGTGCTCCAGGCTTCTAGTAATATAGTCTCTGGTGAAAAAAATCAAATGTAACCGATAGACTATGAAATAGTCAAATGCAAGTATTAGCAAATAATCTAATTATAGCAAGTGTATAATATCCCTTGTGTGCAGCTAATTAGTCCCCTAAATTAACCTAAGATTATGCTGTCAGTTACAATATTAGTTTGTATCTGTCAGTTACAATATTAGTTTGTATCTGTCAGTTACAATATTAGTTTGTATATATTGATGATTACACAATCAATAGAAATCACGGAAAACATTATCTTACATGGTATCAGTTTTGGTTACCTTCCTCTAAACCTCTACCCTAGCCGTCTCCTCCCTCCCTCCCTCCTCTTCTTCTTTCTTCGTGATACCTCCCTCATGGCCGAGAAAGCTGGGTTCCATTCTGCCCTTGCTGTTACTAATGTCAAGTCTCTCATCACTATCACACTTGACCTAGAAACCGGCCAATATCACGAATGGGCAACACTTTTTAAGGTACATGCACTCTGTCCTTGATCACATCATCCCTCCTTGATCACATCATCCCTCCTACGGATGAAAAAGAGCTTGCCGCCTCCGTCGCTGCCAAAGCTGCTGACTTGCCACCTTATGGAAACGACTAGATGTTGTTTTCCTCCAATGGATTTACGCCACCGTCTCTCCGGACATTCTCTCCACCATCCTCGTTCTTGATAATCTTGCTGAAAATGCCCGGAAACGTGTTCATCAGATTTTTCAGGACAACCAGAATTATAGAGCTGCTTTCCTTGAAACCAAATTGACTAACACAAAGATGGTGGAGTTCTCCTCGGTGGTTGTCTACTACAATCGCCTAAAGTGTCTTGCGGACCAATTGGCCAACGTTGGGTCTCCTGGTGCTACGCACTCTTGCGGGACTGTCTAAAGCCTATTCCTATTTTGTCACCAATATACAGAAGAAGAAAACTCTGCCTTCCTTCACGGAGAGTTGTTCTCGGTTAAAGCTACAGGACACCACTGCCAAAGAACGGGCTCGCGACGCCGGGTCCACGACCGTTCTTCTCATGGATGATGATCCTCGTCAGTCGTCACAATCTCCAACTCACAATCATGGAGGTAATTCTAATTCCAATGGTCGTAATTCTCATCATAATAATATTAATAATAATCGTGGCAGGAAGAATAATTATAATCGTGGCAAAGGAAATAATACCAACAACAACAACCGTGGCCGACCAGCCGGCCGCGACGGTGGTCAGACCAGCAACCACCAACGTGCGGTGGTCCATCCAGCCACACCCACCGCGGCACAGTGGCCCTACCCCGCCTGACCAGGCTTGGAGTACCAGCCATGGGCGTTGTCCCCTTGCCCGTATCCAACATCTGCTTGGGCGCAGGGGGCTCAACGACCTCCAAGGCCCAATTCTGGTCCGAGGGTGCTAGGCCCACCTCCAAGGCCTCATCAGACTTATGCAATGCAGGCGCCCCCATTTTATGGTTATGCACCAACCAATATTGAAGCCGCGATGCACACTCTTTCTCTTCACCAACCGGATTATAATTGGTATATGGATACCTATCACATGACCGCAAATCCAGTTATTCTCACGTCTTATTTTAATTTGAGCAAAAATACTGGTATTGTTGTTGGAAATGGTAGCACTATTCCAATTCGTGGCTATGATCATACTTCCCTCACCCCTCCTAACCCCCCTTTGCATCTCAAAAATGTATTACATGCACCTAAACTCATCAAAAACCTTATCTAAACTCATCAAAAACCTTATTTTTGTTCGTAAATTGGCTAATGATAATAATGTTTCTGTTGAGTTTGATCCTCTTGGGTTTTCTGTGAAGAATTTACGGACGAATTTACGGACGGGGAGCCGTCTCATGAGACGTGAGAGCGTCGGGGAACTATATCCACTTACTGCCATCCACAAAGCCACACCACCATCCACCTTCTTAGCTGCTTCTCAAAATTTATGGCATTCTCGACTCGAGCATCCGGGCAATGCCAGTTCTCTTCGGAACAATGATTTGATTAAATGTGATAAAACTCGAACTTCATTATGTCATTCTTGTCCTTTGGGAAAACACATTAATCTGCCATTTCATCACTCTATGTCTTTTACTGCTATGCCATTTGATATAACTCACAGTGATTTGTGGACATCTCCCGTTTTGAGTTCTAATGGGCATCGTTATTATGTTTTTTCTTGGATAATTATAGTAATTATTTGTGGACTTTTCCTATCTCCGCCAAGTCCCAAGTTTACTCAATTTTCCTATCATTTAAGGCATTCATACGAACTCAATTCGAAAGAGATATCAAAAACATTCAATGTGATAATGGGCGGGAATTTGATAATGGACCTTTTCAATCCTTTTGCACGACTAATGGTTTGAATTTTCGTTTTTCAGGTCCACATACCTCCCCTCAAAATGGTAGCGCGGAACGAAAAATTAAATTCATTAACAACATGGTGCGTACAATGCTTGCCCACGCCTCCATGCCTCCCACATTTTGGCATCATGCTCTTCAAATGGCTACCTATTTTCTAAATATTCTCCCCACCAAACTCTTGGGCTTCAAATCTCCAACTCAAATCCTCTATCAAAAGACCCTTTCCTATTCTCATCTACGGGTTTTTGGGTGTTTGTGCTATCCTCTCTTTCCGTCCACAACTATTAATAAGTTACAAGCACGTTCCACACCTTGTTTCTTTTTGGGGTATCTATCCAATTGTAGGGAGTATAAATGTTATGACTTGTCAAGCAAGAAAATAATAATCTCAAAGGCACGCCATATTTGATGAGGAACAATTTCCATTCTCCAAAATTCATACTCCAAATATGAATTTTTGGACAACGAATTATCACCCTACCTCATACAATACTTGACTTCCCCAAATCCAGGCCCAACCCACGCTGAGGCTGCAACTCAGCCCAACACCCTTGCTGCCTAGCAAGCCCAGTCCACTACAACTTCCTCGCCTGGCCAGCCTGCTCTTGGCTTCTCCTCGTCAGTCCAGCCCACAATGCAAGGCCCACTGCCACTCAACACCCCTCCTCCATTCCCAACCCAGCCTATGACTCCCCATGCTATTGGACCACCCACCCCCTTAGCCCAACCAATTCAGCGGCCCACCCGTATGACCACTAGAAGTCTAGAAGCCAACATTGGATTCACAAGCCCAAAATCCCATTTAATTTGAGCACTTCCACCACTTCTATTTCGCATATTCCGCGAAATCCCATAAGTGCTTTAAATGATCCGAATTGGAAGGCTGCCATGGTTGATGAATATGATGCTCTTATTAAAAATAAGCGTGGGAGTTGGTTCCCCGTCCTCATAATGTTAATCTCATTTGTTCTATGTGGATTTTTAGACATAAAAAGAAATCTGACGGTTCTTTTGAGAGGCACAAAGCCCGTCTTGTAGGTGATGGCAGGTCTCAACAGGTTGACATTGATTGTGACGAGACATTTAGTCCGGTTGTCAAACCGGCTACAATTCGGCTGTCTTAAGCATTGCATTATCACATTCTTGGCCCATTCATCAGTTGGATGTGAAAAATGCTTTTCTTCATGGCAATCTTCAAGAGACAGTTTATATGCATCAACCAATGAGATTCAAGGATCCAACTCATCCAGATTATGTTTGTCTCTTGAAAAAGTCGTTGTATGGACTTAAACAAGCCCCACGGGCATGGTACCAACGATTTGCTGAATTTGTTCACACCATTGGTTTCTCTCACAGTCGCTCCGATCGCTCTCTCTTTATTTATTGTCATGGTATTGATATGGCTTATATTCTCCTCTATGTTGATGATATAATTCTTACAGCTTCTTCAGATGCTCTCACATTATCATTCATATCCTTGCTCAGGGCAGAATTTGCAATGAAGGACTTGGGTCATTTGAGCTGTTTTTTGGTATCGGTGTCACCCTCCAGGTGGCATGTTCCTTTCTCAGAAAAACTATGCAGCAGATATAATTGAGCGTGAGTAAGTGCAAACCCAACCACACTCTAGTTGACACAAAAGCCAAGCTTGGCTCCTCGGGTGGGAACTCTTATGATGATCAATCTCATTTCCGTACCCTAGCCGGCGCATTACAATGTCTCACCATCACACGGTCAGACATCTCTTATGCTTTTCAACAGGTGTGCCTCCACATGCACGACCCAAAAGTCGAGCACATGAATGCTCTCAAGCGCATTGTGCGCTATATTCAAGGTACCATTGATTTAGGTCTCCATCTGTATAAGTCTACCATTGCTTCTCTTGTCTCCTATACAGATGCAGATTGGGGTGGATGCCCAGATACTCGACGATCCACCTCCGGTTATTGTGCGTTTCTTGGTGATAACTTACTTTCCTGGTCGTCTAAACGCCAACCTACTCTATCTAAATCAAGTGCTGAAGCTGAATATAGAGGCGTTGCTAATGTAGTATCCGAATCATGTTGGCTCCGAAACCTACTATTGGAACTCCGGTTGTCCTATCTAGAAAGCTACATTAGTTTATTGCGACAATGTAAGTGCTATTTATCTTTTCGGAAATCCAGTTCAACACCAACGCACTAAACATATAGAAATGGATATTCACTTCGTGCTTGAAAAAGTCGCACGTGGAGAAGTTCGTGTTCTTCGTGTCCCGTCCCGTTACCAGATTGCAGATATTTTCACTCGCGTACTTTTTTGATGATTCCAGGGACAATCTAAGCGTACGATAACCTCCCGCTTTGACTGCGGGGGTGTGATAGACTATGAAATAGTCAAATGTAAATATTAGCAAATAATCTAATTATAGCAAGTGATATCCCTTGTGTACAGCTAATTAGTCCCCTAAATTAGCCTAAGATTATGCTATCAGTTACAATATTAGTTTGTATATATTGATGGTTCACAATCAATAGAAATCACGGAAAACATTATCTTACAGTAACTTCAAAAATCACGCGTTTTCTGAGAGGTTACAACTTAGCTATTCACAACAAATTCACGACCTGTTTTGGAGCGGTAATAACCAGTGGGAATGAGAATGAATGTAAGTGTGGTTTGGCAAGGACAATATCATCACAATGTCCGTGATAATGAAATCTCATCCAAAACTTGTGGTTTTCTTCATAAAGTTTCATTCCCACCCAATACCAACCCCAAATGTTAATGGATGGTAATGGAAATTTATGGACAATAGACAACTTGACCATGGAAATGAAAATTGATTTTATTTACATATAAATTAATTTTCATTAACTCCATTTATTACCAGCTACCAAATGGGTTGTCAATGTTAAGGACTTGGAAGTTAGAAGTCTAGGTTGTAGAATTGTGTGCATCTCTAGAGTAGGTCAACAATGCTAGGATGCTCGGACTCGCCCCACCACCCCTCCGTACCGGTGTCGACACGACACGACGCGACGCGGGTACGGACACGGAATCCGGACCGGACTCGCCATGGGGAAAATGGACTCGTCTTTTAGGGTTTTGTAAACCTAGATCCGAAAATAGAAGCCTCGAATCAGGGATATGGAGACCGAGACCTTAGGGCTTTTGGCCGCCTGAGAAATGCGAGCTCACTAGGATATTCGCCGGCTGGGTGATGCTCTTGGATGTTTTGCAGACAGACTCCATGGAAGTCGATAGCTTTAGTTTTTTTTTTAAATAAGGAAGCAGGTGTGGACAACTGTCAGCCACTATCTCCTATTTAAAAGTGAATTAAAATAATAATAACATGGGATAATGGGGTTGCGAACTGTTTTATTTATTTATTTTTATTAACTTTTGAGATTCTTTTTGACTTCTAACCCCATTTTCTTTTGGGAATAGAGATCACGTGTATTAATATTTTACTGGTTTCAACTTTCAAAACATTTTTACTTTTAAAATTCTTTTATAATCTTACAAAAATACGTATTAATATTTATTTATACACGTATTATAAATATTGAAGTAATAAGTAAATTAATATTTTTTTAATAGTTGTTGTGTCCCCGAGTCCGTATCTGAATTTTGGACACTTCTAAAACGTGTCCCCAAGTCCTTAATTATTAAAAAGTTCGGGTCCGACCCTTAGACCCGTACCCGAGTCCAAGCATCCTAGCAACAATGTACTTGTAAACACAAATTTCAAGTGTGCAAAATAAGAGAATCAAAATATGTGAACAAAATATAATGTTATTGATTTTCTGTATTTGGTACAATCTCTAATATTTTCTCCTCTGATTCGATCTCCACTTTGAATTTGACTTAGACTCACGCAATGATTTGATTTGGTTCACGAACTAGTTTGATTTGTACTTGAATGAGGGTCTTCTGCATGGAATTAAAACTCGGCCGTTCCGTTACGTAACGGCCGTTCTGTAACCTATTTTGGATTTTCCGTTACGCGAAAACCCGTTACGTTACGGTTTGACAAAAATCACGTCTTTCTCCCCGCGACGTCCGTTACGTAACGGTGACTTGCCGCGTTAGACGTTTTTTTCTCCGTTACACCGTTCTTTTACATAAATTGACCAAAAATATTTTTGTAATTAGTTATGTATTTTATGAAACATGATATTTCTAGCGCTTATTTGTTCACAGAATATAATAGTCACTCATATTAGGATATATTTGGTTATATTGTCTTGATATAATACTTTTTAGACTAAAAATGTAATAATAAGGCTTAGACATGCTAACGTGGTTTTTTTCAAAAAATTCACACCGCGTTAGCCGCGATCCGTTCTATTCTTCCGTTACAAGCGGTTTCCGCGACAACGCGACCGTTACCGCGAACGCGACCGCATCCGCGTTTTTTTCTATGGTCTTCTGGCTTGATCTCGTTCAAGGATATTGATGTAGAATAGAACGACACGTCAGTTTTGTTGCTTGTTCTTCTTTTATGAATGATTTGATGTTGTTCACGACCCAATTTGCTCTTCTCGAATAAGGGTCTCTGGCTTGATCTTCTAGAATGGAACTGCACGTCAATTTTGATGCTTGATGTTCTTCTTCTAGGGAGAGAGTTGTGACTTGACTTGCAGGGAAAGTATTTGAGAGTTTTTTATGTTTTGCTGTCTGTTTCTCCTCTCCGGAAAATGAGGTAAAATACTCTATTTGTCTGGACTTGGTTGTCATGACCCATTTACAACAGTTTTGACCCACTTTATTGGGTTTTAACCACAAATAAACGGTTTATACTTAAAATGGGCTAAATTATATTTTGTTCATCCAAATTAATTCAATTTAATGGACCGTCAAATATATACTGAGTCAATATTTTGACCTTTGACCCGAATAATATCCAACGTGGCACATTAATAAATTTTCCGTGCCTACAGTACCAAACGTAGTTACTACAGATTTTCTGCTGAATGTCAAAGTTTGTGCTTCATCAGCGGAGATCATACTAGTATACTACTTGGACTCCTTTATTGCATTTACATTTGGAAGATTAGAATGGGAGAGAACACTGTGAGATAAAATTTAGAAGTGAGATGACCTATTTTGTAATTCTGCAGTTATTACTGGTGCTTGCTTCTTCCCATTTCCAACAGCGTTGAAATAGGGAATTTCACAGCTTTAGAGTTAGATAATAATGAAAGAATTTAAATATCTCATTTTCAATTAGTAGGCCTGTCATTTCCTTTCCTATTCTGTCAGAAATATAGATACTACCTCTGTACAAAGTGCGGGGGCAAGGTGTGTACATCAAAACGCCCTTAATTTACCCCGCATTGGTTAGTGGTTAGAAATGATGAGGTAATAGTAATGCCTAAATTGCTGCTTGCTATTGTTCATGGTTAGCTAGAAGAATAGGAGTAGAAGTCTAGAACTTAGTGGAATCTAGTATTTGTTGTTAACTGTGAACTGCCAGTCGAGATCGAAGTCATGGAACTTAATCACTTATTAACTACTACGTACCGTGTTAGATTTGTGACTAGTTGCAAGGTGTAACTAGGGAACTTATATCACTTTCTTTTTCTCTCCTTAAATTATCGTCTCCCTTCCTCCTCTGTCTTTTATGGACACAATTTTTAATATTGTTTATCCAGCGAAAGTTTTGCCAGGAGAGCTATTATTGGTTTAGTAAAGTATTATCTTTTAAGTGGGCTTGCATTTTATTCACATTGGGACTTCCTCGGTTCCAATTTAAATGCCCCACTTCTACAAGGATGTTATGTAAAAAGTAGCTTTCAGGGAAGGATTGACTTAGAATGTATTGTTATTAATGAAAGAAATTGGATCATTTTGTAAGATCTCTATTTAAGTTGTATTAGTTTGAAGTAGTATATATTAAGAGAAAAAATGAACCTACTGAGAATGGTATGACTCCTGAATTCATGATGACATTGTGAATTGTATTTGAAGTTCATCTTGGAATTATGTGTAAGGTTGGATAGAAGCAGACACTGATTCTATATTTGTAGCGGAATCATGTATTAGTTGTAGCAGAAGTCACAACAAAGTTGAATCATCTATTAATTGTCTTGTTTTCATGTGTAAATAAGCTTGTTGCTGAAAGTTTCATGTTTCTTCTAAGGTGCACAGACTCGATAGAGATAGTAGCGGAATCTTGGTGATGGGAAGAACACAAACAAGCACAGCAATCCTTCACTCTGTTTTCCGGGAGAAAACTATTGGTATAACAAAAGATGTGAGTTGTCGTATCTTTCAAAGTCAGTAGCCTTTTCTTGACAGGCATCACATTAAAAATTTAAATTGAGGTGTTCTTTTTGATTTTTTATGTGTGTTACCCTTATTGCTATGAGATTAACCGTGATTAAGAAAAACTAATGAAATTTGATTCTCAGAAGGAGGTTGACTGGGGGAAGAGAATCCTACAGAAGAGATACTTGGCACTTGTCTTTGGGGTTCCCAAACATGTCAAGGGGTTGATTTCAGTACCCCTAGCAAAGGTGCTTGCTCTTGTCATTAATCTCTTACATCAACTATTGATCTTGTATTTGAACTCTTTTTTCTTTATTATTTTTGAACTCTCAACCCATAAATTCTTGACACTAGTTTATTCTTATTGGTTGTACTCAGCCTAAGTGTTGCCGAAGTGTCACCTTCTCTTCAATTTATTATCTTACCTTACGGCGATGCTTTGGAGTAATTTCTAGGAGCATCTCACCTAAAATCAAATATCTGATTTTAAAGTATCAAACAAGTACTTGGAATATTGATTAGTTTCCCAAAAAAATTGCAATTTACCTATTTATTTGCATACAATTCGAGTATTTGTTATCCTTATTATTCATAACTTCGTATTTTTTTCTCTAAGAAGCATGACAATCCGGAAAAATACTTGTTGTGAAGGTTGATAAAAACTTTGTCCTGTTTAGTGTATAGAACTGGATCAAAGATCTACTACCCTTTGCAAGACACCATTCATGACAAAAGATACATTTTTGAACTCATCAGAAAATTACAGCTGTTGGGGGTAGGCTCTCAAATAGTATTTCCTTGTTGCTTAAGGGTCCATATTTGCCATCGGATATAATTGACACCAAAGTCAAAATGCCTAATAATCTATACTTAAAAACTTTAAAATACTGTAATACTCACACTTATAAGGCCTCTTAAGGCCAGGAAATAGGTTAATGAGAATCAGAAGGAAGCTTAGCATTGTGTAATGGCTGAACGGCTAATTAGTCCATATAGGATTCTAGACCTAGGACTTAATTTCCTGAGCAAAAGTCACAAGTCTTATCCAGGATAGTGGTAAAATATCTAGTACAGTAGTACTTTACAAGATTTGGAGGAAAGTCTCTTCAACTTCCAATCACTAGACGAGGGTATTTATTGGCCATCCAACTCATAAACACACCTAAATGGTTGTGGCTTCGCCAACCTTTCGAAGGTTGTAATTCAGTCTGATGAGATTCTTGTGAGGCTCATTGGTAATCAATATCTAAGTGAATATGGGAGACATCTTTGGACACTATTGGAGGGGTTTTGCAGAAACTGAAGGGAATTGTTCCAGACTCTTTGAGTGACTCCTTCCCATAGATAAAAAAAGCGGTATCGTTCACAGTCGCGGGATCGGTCGCGGAGTCTCGGTAACGGAAATGATGCGTCAGTCGCGAACCGTGTCGCGGTTGTCGCGTAGGAATTGGAAATTTGAAAAAGAAGCCCCATGTCAGCCTCACTCACTACCTACCCTAGTCCCCCTCCCCTAAACCATACACGTGACATAATTAAATGAATTTGTTTGTCTACCTTCTCTCTCCTCTCTTGTTTCTAGATCTGAAAATGGAGTTCTCCACTCTATTTTAGTGGAGTTTCTCCATTTTTTTCCCTTTTCCCTTTCTTTTTGTCGAGAACATGGGAAATTCGGCTGAAAACCGAGTAGATGTGAGGTTAATAACGTTTAATGCGGACAAAATTCGTTCGGATCGGTTGAACCGGCCGAGATCTCGCCGTTTTCAAAAACACCTTTACAACTCGGCATATCTCGTATCGCCGGCCTCCAAAACCTAGTTAACTCGGGCGATACGAGTTAACTCGGGCGAGTTTTTACACCATGCTCCTTCCACAGTCACGTGAGGATTACATTGCCGTTGCAAATTTTGAGATATTAAACTTACTTTTATGAGGTTTAATCTTGCTGTGGCCTTCCAGTAACCGAGTATCTCGCATGATACTTGATCAGGATTTATTACCTTTGGGAAAAGTAATAAATCATAGTTGAGAGACTCATTTCGGACTTCAAGAAAAATTCATAAGTCTTAATTGGTATTCAGAACACAGATGATACTAGACTGAATAGATGGATATCATGTCAAAAGCTACAAGATATGAATCTGAGCCTATGTGCAAGGCCTAATCAAGTCCTGGAGAGGGGCATTTTGACTTAATCAGCGTTCATTTTTCAGATATGGAACTCAGAGAGAAGTCTTTCTTCTCCAAATTACCCTTCTTGGATCATCTAGGAATTAGGTTACATATTGGTCATTCTAATAAGATGATGAAACACCAAATTGCTGCAACCGAGCCCCATTTGATGGCTGTATGTTACTCATGCTCCGTGAGACCATTTCGAAGTTCATTGGAATAGTTTACGTGAATCAGGGCAGGGGGGACCTTTGTATGTTGTACTGTTGTTCAATAGCCACCATGTTTCTATGGGACACCAAATGCAAGATTTTAATTCTGCAAAGGCAATAGCCCATAAAGCACGCGTGTGAACCCATTTCGATCTGAAGATCATGACAGGAATTGGAGGAAAGTCTTACAGATTCTAAATAACCTGTAACTGTCCCTTGAGACGCATACTGACCATTTTCTGTATAGGACATTAGATATAAAGCAATTTTGAGAGAACCTTTTTTGGCAGCGGATATTCATGATTTTGCGTACTGTTGGGTGTTGGTAAAATTGGTCAGTAAGTCCTTAGGGATAGTTTGATGGCCCTGGTTTCAATTTATGATGCTAGATTGAACTGAGATCTGTCGTCCTTTCCAAATGTCGGGAAGTGTTGACAAATATGGAGGAAAATTTCCCTGTCTTTCAAGAAAGCTCTAGGATTGACCAATCCATATGGGTAGCCTGGGACTTAAAATGATGCTAGGCTCTGCAAAACTCGTAGGCATTGTTGTTAGAGTAATGATACATGTGACAGAGCTATACAACAACTTTAGCAATTGCAACGGTGAAAATAAATGCTAGTGGGTATACCTGTTGTTCTTCAACTAGAAGAATCTTGATGTTATACTCTACAATAGTGGAAGGTGGTACTTCCTTTTATGTTCTTATGATGAAATGTGGTCTAGATTTCAGCCAAGTAAAAGGTAATTATTCAGGAAAAGGTTTTGAATTTTGTATTTTTTTTTAATATTGTTGAGATTTTGAAGAGACAGTCAATCTTTATTCATCTATCTACTCCCNCCCCCCCCCCCTTGTTGTCAAATGCTCAACAAAATTTCTTTCAATATTGTTTACATTTTCTTCCTATTAAAACCGTCCTATTAACTTTTCCACACATTTATTTTGAGTTAAGAATCGCTCTTATTTCTCCATATTAGCTTTGCTGGATTTTACACCATGCCCAAGTAAGTAGTTGCTTCTAAGGAGTATTTCATAAGTTACCACTCACATCCATCCGATCTTCTCGGCATCAAATTTTGGACATTCTAGAGGTTCTCTTGTCACTAGAGTCCCACTGACCTTTAGAACCAGATATTATATTGTACCTCGAGATGGAATGGATAAGGCTTATTGAATAGGTTATAAGTTGTGATTATGAGGCGAACACGTCCTGTAGAAAGTCTTTATGACTGCTCTATGTGATGTGGAATCAGGTCCCATTTGTGTATAACTCATTTTAAGATGGTCTCGCAACCAAATGTAAACCATTTCTTCGTAACTCTCAATTGTATTGTTTCCCACACAGCAATCTTAGTTTGTAAACCATTTCTTCATAACTCTCAATTGTATTGTTTCCCATACAGCAATCTTAGTTTAGACCTCCTATGTTAATAATTTTCTTTGGTTACACACACGGAAGTTGTGTTAGGGAGCAGGGCATGAAATAGGTGGGATAAATACACAAGTACCACACACTTTCCTATTGTAACATGTTCTATTCTTATTTTGGTGGAGTCACCATTGTAAATATAATAATATTACGATATTGTTAATTGCTTGCTTTTAATCCTGTCACAATGGAGTATACCTGCCTATTAAGCAGGATGAAAATGGAACAAACATACATTTTGCCGTTTCTAACTGTCCAAAGTTTGTGAACTTGTCTAAGCATTGTTTTTGAACTGGAATTAGATGATCAATTCTTCTCTGTCATTGCTTAAAAAAAAAAGGATACATTACCCTAATAATGCTCTTCTTTACTAATACTCACGCCATCCACGTTGGTGGCTCACTTTGTATAATTTTAGTGCTAGTTTAAGAAACATAAACATGGTTCATGAATTCACTTGTTCTGCTTGTATGGTTTAGGTGTTGGTAGATGATGGGAAGTCAGAGCGAATTACAGTTGCAGACAATGCTTCCTCATCTCAGCAGGCTGTGACAGAGTATAGGGTCATCGAGTCTTCTTCTTATGGTATCCTTCACTCTTTGGTATATTGTTTATTACAAAATTATATTATGATGTATGACCAGTTAGCACAAAGGTTCCATTCTGAACAATATTTGTTCCTGATATCTGATCAAAGAGAAGAATTTGGAAATATGGTTCACTGAAGTAGAGCTATTGTCTTGATAATTTTCCAGGGTATACATGGTTAGAACTATCCCCGGTCACTGGAAGGAAACACCAGGTAAACTCCGAGAGACATTTTTGTTGATGAATCCTGGCCTTTCTTTTAATGGATTTTGTTGATGGAAATGGCAATGTCATGTAAAATGCAGCTCCGAGTGCATTGTGCAGAGGTACTCGGTACACCTATTGTAGGAGACTACAAATATGGTTGGCAAGCTCACCGGAGATGGGAACCTTTACCATCAATTCCTGATGAGAAATTTGTTGAAGCAAAAGCGGACCCACTTGGCCTGAATTTAGAGTGTGGAAGCATCTCCGAGAAGCAACCCCACTTACATCTGCACTGTAAACAGATGAATTTGCCCAACATATCTGTCGCTCTTAAGCATGTTTCCCCTGATATGGAATATGACTTCTCTAAGTTGGAGACCATAAACTTGGTAGCCCCCTTGCCATTGCACATGCAGAGGAGTTGGAATCTTCTGAAATTTCTCGCTCAGCAAGATTCCTGAGTCCATAAGTATCCTTCTTTTGCAGATGGTACTCTCTACTTCTCTTTATTCTTTCCATTCATGTTGAGCAAGAGGCATGTTTTCGGCCTACATCATTAAGTTTTCCTTCTCCTTCCAATACGGCTTTGTTATATGGCCTCTGATATGTCGGATTCTTTTCTTGAGTTAGTTGAGTAGGTTTGCAAATGTTAAGGATTGGAGTAACTTTGATTAGAAATTAGTGACATATATAGGTTATATTACAGGAATTTAAGACTTTTTAGGGGATATATAGCATAACCAGGTCAGCGGAGAAGAGCAAAGGATTTCTTTTTCTTTTTTTATCTATAATTTGGCTTCTTGTTTACCAATTTTCCTATTCTATATTTTTATGTGGGATGTAAACAAAGAGCACCTTCGTATAGGTAATGTACCATTTCAAGCTTTACACTAAGTAGATTCTGTTAGCTATAATACACCGTACTGTTTTGAAATATTCGGAAAAAGATGTCAATTTTGGAAATAGGGATCACGGTAAACCCCGATTCAATTGTAGTACCCCATACTCTGTAGTAGAGATGGAAAAGAGAACCATGACCACTTATAGGGTGTTTTAGAAAATTCGTGATTAATTCTTTTTTATTAGGTCAAAAG

mRNA sequence

CATTAGTTATTTTTTATGTATTATGGAAAGTTGAGTAGGTTTGGAATTTCTTCAAAAATACGACTGTAAGACTCGTAAGAGTTTGACTCATTTACTAAACCCCACCGCACTTGAGAAACAGGGAATGGCAGGACCTTCCTTTCTCCGGCAAATTCTCCGTTCTTCAGCAGCCTCCGCCGCCACAAAAACCGAAAATTTGTTCAAACAACCACGCTACCATTTCGCCTCTGCCGCCGTTAAAGAGGAAACTCATGAGTTAACGGAGAAGAACGATAGTGGTGGGAGAGGCAAAGGAAAGTGGGTAACTTTACCGCCGTTTACCTCAACCGTTAACACTGACTCGCTTGGTAGAAGACTAAGCCGCCGGGATATCGAAGAAGCGAATGAGTCCATTAAAACGACGACGTCTGCTCTGAAATGGGTTATTCGTTGCTGTCCTCATCTCCCTCAATCACTTGTCCAGAAACTCTTTCGTCTTAGACAGGTTAGAAGAGAATGTTTAGAAGGAGACGTGTACAGCAGCGGTGATGCCCAAGAATTCAGGCTAAAAAGGGTGGGAGCTAAGGACTCGATGAATAAAGGAGAGCGTATCTTTCTTCCTATATCTGTACAAGGATCATCACCTGTCAAGAAGCAGCCGAAGTATGAGTGCAGCGAAGCAGAAATGAATTTCATTCGCAGCCTTGAGTTGTATAAGGATTCTGCCATTATTGCCATCAATAAACCCCCGAAACTGCCAGTACAGGGTGGCCTTGGGATCAAAAAGAGTTTAGATGAACTGGCTGCTACAAGTCTCAGATATGACGTTATGGAACCTCCCAGGCTGGTGCACAGACTCGATAGAGATAGTAGCGGAATCTTGGTGATGGGAAGAACACAAACAAGCACAGCAATCCTTCACTCTGTTTTCCGGGAGAAAACTATTGGTATAACAAAAGATAAGGAGGTTGACTGGGGGAAGAGAATCCTACAGAAGAGATACTTGGCACTTGTCTTTGGGGTTCCCAAACATGTCAAGGGGTTGATTTCAGTACCCCTAGCAAAGGTGTTGGTAGATGATGGGAAGTCAGAGCGAATTACAGTTGCAGACAATGCTTCCTCATCTCAGCAGGCTGTGACAGAGTATAGGGTCATCGAGTCTTCTTCTTATGGGTATACATGGTTAGAACTATCCCCGGTCACTGGAAGGAAACACCAGCTCCGAGTGCATTGTGCAGAGGTACTCGGTACACCTATTGTAGGAGACTACAAATATGGTTGGCAAGCTCACCGGAGATGGGAACCTTTACCATCAATTCCTGATGAGAAATTTGTTGAAGCAAAAGCGGACCCACTTGGCCTGAATTTAGAGTGTGGAAGCATCTCCGAGAAGCAACCCCACTTACATCTGCACTGTAAACAGATGAATTTGCCCAACATATCTGTCGCTCTTAAGCATGTTTCCCCTGATATGGAATATGACTTCTCTAAGTTGGAGACCATAAACTTGGTAGCCCCCTTGCCATTGCACATGCAGAGGAGTTGGAATCTTCTGAAATTTCTCGCTCAGCAAGATTCCTGAGTCCATAAGTATCCTTCTTTTGCAGATGGTACTCTCTACTTCTCTTTATTCTTTCCATTCATGTTGAGCAAGAGGCATGTTTTCGGCCTACATCATTAAGTTTTCCTTCTCCTTCCAATACGGCTTTGTTATATGGCCTCTGATATGTCGGATTCTTTTCTTGAGTTAGTTGAGTAGGTTTGCAAATGTTAAGGATTGGAGTAACTTTGATTAGAAATTAGTGACATATATAGGTTATATTACAGGAATTTAAGACTTTTTAGGGGATATATAGCATAACCAGGTCAGCGGAGAAGAGCAAAGGATTTCTTTTTCTTTTTTTATCTATAATTTGGCTTCTTGTTTACCAATTTTCCTATTCTATATTTTTATGTGGGATGTAAACAAAGAGCACCTTCGTATAGGTAATGTACCATTTCAAGCTTTACACTAAGTAGATTCTGTTAGCTATAATACACCGTACTGTTTTGAAATATTCGGAAAAAGATGTCAATTTTGGAAATAGGGATCACGGTAAACCCCGATTCAATTGTAGTACCCCATACTCTGTAGTAGAGATGGAAAAGAGAACCATGACCACTTATAGGGTGTTTTAGAAAATTCGTGATTAATTCTTTTTTATTAGGTCAAAAG

Coding sequence (CDS)

ATGGCAGGACCTTCCTTTCTCCGGCAAATTCTCCGTTCTTCAGCAGCCTCCGCCGCCACAAAAACCGAAAATTTGTTCAAACAACCACGCTACCATTTCGCCTCTGCCGCCGTTAAAGAGGAAACTCATGAGTTAACGGAGAAGAACGATAGTGGTGGGAGAGGCAAAGGAAAGTGGGTAACTTTACCGCCGTTTACCTCAACCGTTAACACTGACTCGCTTGGTAGAAGACTAAGCCGCCGGGATATCGAAGAAGCGAATGAGTCCATTAAAACGACGACGTCTGCTCTGAAATGGGTTATTCGTTGCTGTCCTCATCTCCCTCAATCACTTGTCCAGAAACTCTTTCGTCTTAGACAGGTTAGAAGAGAATGTTTAGAAGGAGACGTGTACAGCAGCGGTGATGCCCAAGAATTCAGGCTAAAAAGGGTGGGAGCTAAGGACTCGATGAATAAAGGAGAGCGTATCTTTCTTCCTATATCTGTACAAGGATCATCACCTGTCAAGAAGCAGCCGAAGTATGAGTGCAGCGAAGCAGAAATGAATTTCATTCGCAGCCTTGAGTTGTATAAGGATTCTGCCATTATTGCCATCAATAAACCCCCGAAACTGCCAGTACAGGGTGGCCTTGGGATCAAAAAGAGTTTAGATGAACTGGCTGCTACAAGTCTCAGATATGACGTTATGGAACCTCCCAGGCTGGTGCACAGACTCGATAGAGATAGTAGCGGAATCTTGGTGATGGGAAGAACACAAACAAGCACAGCAATCCTTCACTCTGTTTTCCGGGAGAAAACTATTGGTATAACAAAAGATAAGGAGGTTGACTGGGGGAAGAGAATCCTACAGAAGAGATACTTGGCACTTGTCTTTGGGGTTCCCAAACATGTCAAGGGGTTGATTTCAGTACCCCTAGCAAAGGTGTTGGTAGATGATGGGAAGTCAGAGCGAATTACAGTTGCAGACAATGCTTCCTCATCTCAGCAGGCTGTGACAGAGTATAGGGTCATCGAGTCTTCTTCTTATGGGTATACATGGTTAGAACTATCCCCGGTCACTGGAAGGAAACACCAGCTCCGAGTGCATTGTGCAGAGGTACTCGGTACACCTATTGTAGGAGACTACAAATATGGTTGGCAAGCTCACCGGAGATGGGAACCTTTACCATCAATTCCTGATGAGAAATTTGTTGAAGCAAAAGCGGACCCACTTGGCCTGAATTTAGAGTGTGGAAGCATCTCCGAGAAGCAACCCCACTTACATCTGCACTGTAAACAGATGAATTTGCCCAACATATCTGTCGCTCTTAAGCATGTTTCCCCTGATATGGAATATGACTTCTCTAAGTTGGAGACCATAAACTTGGTAGCCCCCTTGCCATTGCACATGCAGAGGAGTTGGAATCTTCTGAAATTTCTCGCTCAGCAAGATTCCTGA

Protein sequence

MAGPSFLRQILRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWVTLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQVRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGLISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQPHLHLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo10122.1	Spo10122.1	mRNA

Homology

[Close]

BLAST of Spo10122.1 vs. NCBI nr
Match: gi|902169920|gb|KNA07729.1| (hypothetical protein SOVF_168390 [Spinacia oleracea])

HSP 1 Score: 961.4 bits (2484), Expect = 5.700e-277
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 1

		  
Query: 1   MAGPSFLRQILRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWV 60
           MAGPSFLRQILRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWV
Sbjct: 1   MAGPSFLRQILRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWV 60

Query: 61  TLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQ 120
           TLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQ
Sbjct: 61  TLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQ 120

Query: 121 VRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAE 180
           VRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAE
Sbjct: 121 VRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAE 180

Query: 181 MNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDR 240
           MNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDR
Sbjct: 181 MNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDR 240

Query: 241 DSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGL 300
           DSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGL
Sbjct: 241 DSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGL 300

Query: 301 ISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLR 360
           ISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLR
Sbjct: 301 ISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLR 360

Query: 361 VHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQPHL 420
           VHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQPHL
Sbjct: 361 VHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQPHL 420

Query: 421 HLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS 479
           HLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS
Sbjct: 421 HLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS 478

[Close]

BLAST of Spo10122.1 vs. NCBI nr
Match: gi|731360178|ref|XP_010691670.1| (PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 716.8 bits (1849), Expect = 2.400e-203
Identity = 361/480 (75.21%), Postives = 403/480 (83.96%), Query Frame = 1

		  
Query: 1   MAGPSFLRQILRSSAA-SAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGG-RGKGK 60
           M  P   RQ+LRS AA + A + E  FKQ  Y F SAAVK E HE  EKN  G  R KGK
Sbjct: 1   MGKPFLFRQLLRSPAADTVAAQIETFFKQQCYRFTSAAVKVEAHESPEKNVGGSERNKGK 60

Query: 61  WVTLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRL 120
           WVTL PF  TVN  SLGRR+SRR+IEE NE I+TTT ALKWV+RCCPHLPQSLVQKLFRL
Sbjct: 61  WVTLTPFIPTVNAPSLGRRISRRNIEEGNEIIETTTCALKWVLRCCPHLPQSLVQKLFRL 120

Query: 121 RQVRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSE 180
           RQVRREC+E DV  S DA+E RL+RVGAKD M KGERIFLPI+VQGS PVKK+ +Y+CS+
Sbjct: 121 RQVRRECMEEDVDCSADAKERRLRRVGAKDLMKKGERIFLPITVQGS-PVKKR-EYKCSD 180

Query: 181 AEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRL 240
            E++FIR LELYKDSAIIAINKPPKLPVQGG+GIKKSLDELAAT L+YD  +PPRLVHRL
Sbjct: 181 EELDFIRGLELYKDSAIIAINKPPKLPVQGGIGIKKSLDELAATCLKYDFKDPPRLVHRL 240

Query: 241 DRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVK 300
           D DSSG+LVMGRTQTS  ILHS+FREKTIGI++D+E+DWGK+ILQKRYLALVFGVPK  K
Sbjct: 241 DSDSSGVLVMGRTQTSATILHSIFREKTIGISEDREIDWGKKILQKRYLALVFGVPKQSK 300

Query: 301 GLISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQ 360
           GLISVPLAKV+++DGKSERIT++D+ASSSQ AVTEYRVI +S YGYTWLEL PVTGRKHQ
Sbjct: 301 GLISVPLAKVVLNDGKSERITISDSASSSQHAVTEYRVIATSVYGYTWLELCPVTGRKHQ 360

Query: 361 LRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQP 420
           LRVHCAEVL TPIVGDYKYGWQAHRRWEPL   P+E+  E K  PLG+  ECGSISEKQP
Sbjct: 361 LRVHCAEVLRTPIVGDYKYGWQAHRRWEPLQPSPNEQSGETKLHPLGIGPECGSISEKQP 420

Query: 421 HLHLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS 479
           HLHLHCKQM LPNIS  L+ +S D EYDFSKLE++NLVAPLP HMQRSWNLL  LAQ+ S
Sbjct: 421 HLHLHCKQMVLPNISTILEQISLDSEYDFSKLESLNLVAPLPSHMQRSWNLLNSLAQRSS 478

[Close]

BLAST of Spo10122.1 vs. NCBI nr
Match: gi|225428918|ref|XP_002282614.1| (PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1 [Vitis vinifera])

HSP 1 Score: 533.5 bits (1373), Expect = 3.800e-148
Identity = 276/452 (61.06%), Postives = 331/452 (73.23%), Query Frame = 1

		  
Query: 33  FASAAVKEETHELTEKNDSGGRG----KGKWVTLPPFTSTVNTDSLGRRLS--RRDIEEA 92
           F  +A+ ++       ND+        KGKW TLP FT  V+  SLG+ LS  R D+   
Sbjct: 26  FCISALDQQRSCFATSNDAVSEAHKSKKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTG 85

Query: 93  NESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQVRRECLEGDVYSSG-DAQEFRLKRVG 152
           N +   +T+ALKWV+RCCP LP+SLVQKLFRLRQVRRE         G   QE RLKRV 
Sbjct: 86  NTTAGASTTALKWVVRCCPQLPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVA 145

Query: 153 AKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAEMNFIRSLELYKDSAIIAINKPPKLP 212
           AKD MN G++I LPI+V+   P +K  +Y C++ E+NF+ +LELYKD AII +NKPP LP
Sbjct: 146 AKDLMNLGDQILLPITVE-EFPSEKH-EYHCNDEEINFVHNLELYKDPAIIVVNKPPGLP 205

Query: 213 VQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREK 272
           VQGG+GIK+SLDELAAT LRYD  EPPRLVHRLDRDSSGIL+MGRTQTS  ILHS+FREK
Sbjct: 206 VQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSIFREK 265

Query: 273 TIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGLISVPLAKVLVDDGKSERITVADNAS 332
           T G   + ++D  KRILQ+RY ALV G P+  +GLIS PL KV+VDDGKSERIT+ DN  
Sbjct: 266 TFG-ASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVDNVQ 325

Query: 333 --SSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 392
             SSQ A+TEYRVI+SS +GYTWLELSP+TGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR
Sbjct: 326 TMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 385

Query: 393 RWEPL-----PSIPDEKFVEAKADPLGLNLECGSISEKQPHLHLHCKQMNLPNISVALKH 452
           +W+ L         DE     K  P GL+LE GSI +KQPHLHLHCKQM LPN+S+AL++
Sbjct: 386 KWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQN 445

Query: 453 VSPDMEYDFSKLETINLVAPLPLHMQRSWNLL 471
           +    E D S+LE++  VAPLP HMQRSW++L
Sbjct: 446 LQLSAECDLSELESLEFVAPLPSHMQRSWDIL 474

[Close]

BLAST of Spo10122.1 vs. NCBI nr
Match: gi|719970391|ref|XP_010271251.1| (PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform X1 [Nelumbo nucifera])

HSP 1 Score: 530.8 bits (1366), Expect = 2.500e-147
Identity = 286/453 (63.13%), Postives = 342/453 (75.50%), Query Frame = 1

		  
Query: 31  YHFASAAVKEETHELTEKNDSGGRGKGKWVTLPPFTSTVNTDSLGRRLSRRDIEEANESI 90
           Y+ A+AA KEE  + TEK        G+W+ LPP +S+++  S+ + LS R  +   E+ 
Sbjct: 35  YNTAAAASKEEKQKKTEK--------GRWLILPPVSSSIDAVSVVKALSSRPSDLKGETT 94

Query: 91  KTTTS--ALKWVIRCCPHLPQSLVQKLFRLRQVRRECLEGDVYSSGD----AQEFRLKRV 150
            TTTS  ALKWV+RCCPHLP+SLVQKLFRLRQVRRE    D  SS D    AQE RLKRV
Sbjct: 95  NTTTSTTALKWVLRCCPHLPRSLVQKLFRLRQVRRESC--DSMSSLDIGNHAQEHRLKRV 154

Query: 151 GAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAEMNFIRSLELYKDSAIIAINKPPKL 210
            AK+ MN G+RIFLPI+VQ   P + Q  Y C+E E+++I SLELYKD AIIA+NKP  +
Sbjct: 155 TAKEVMNLGDRIFLPITVQ-ELPSETQEHY-CNEDEISYICSLELYKDPAIIAVNKPHGM 214

Query: 211 PVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFRE 270
           PVQGG+GIKKSLDELAAT LRYD  EPPRLVHRLDRDSSGILVMGRTQTS  ILHS+FRE
Sbjct: 215 PVQGGIGIKKSLDELAATYLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATILHSIFRE 274

Query: 271 KTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGLISVPLAKVLVDDGKSERITV--AD 330
           KT G + +   D  K ILQ+RY ALV G PK   GLIS PL KV++DDGKSER+TV    
Sbjct: 275 KTFGASIN---DNDKMILQRRYWALVIGTPKRANGLISAPLGKVVLDDGKSERMTVDTNG 334

Query: 331 NASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH 390
           NA SSQ AVT+Y+V++SS++GYTWLEL P+TGRKHQLRVHCAEVLGTPIVGDYKYGWQAH
Sbjct: 335 NAISSQHAVTKYQVMKSSAHGYTWLELCPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH 394

Query: 391 RRWEPLP-SIP--DEKFVEAKADPLGLNLECGSISEKQPHLHLHCKQMNLPNISVALKHV 450
           R+W+PL  S P  ++K   +K  P GL+ E GSI+EKQPHLHLHC+QM  PNI++AL+H+
Sbjct: 395 RKWKPLSWSNPQKNKKLPRSKESPFGLDSEGGSIAEKQPHLHLHCRQMIFPNIALALQHL 454

Query: 451 SPDMEYDFSKLETINLVAPLPLHMQRSWNLLKF 473
                 D S+LE++NLVAPLP HMQRSW +L F
Sbjct: 455 QSSSNCDLSELESLNLVAPLPPHMQRSWGILCF 472

[Close]

BLAST of Spo10122.1 vs. NCBI nr
Match: gi|590686974|ref|XP_007042534.1| (Ribosomal pseudouridine synthase, putative [Theobroma cacao])

HSP 1 Score: 520.8 bits (1340), Expect = 2.600e-144
Identity = 277/482 (57.47%), Postives = 347/482 (71.99%), Query Frame = 1

		  
Query: 1   MAGPSFLRQILRSSAASAATKTENL----FKQPRYHFASAAVKEETHELTEKNDSGGRGK 60
           + GP+ LR++LRSS   A      L    F Q RYH+++       H L +  +S  + K
Sbjct: 2   LVGPNLLRRLLRSSRPPATHGGNGLIVSAFHQLRYHYSTTNELSAEH-LKDDGNSEKKKK 61

Query: 61  GKWVTLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLF 120
            KW TLPPFT TVN   LG +LS +   +A       T+A+KWV+RCCP LP+SLVQKLF
Sbjct: 62  NKWFTLPPFTKTVNASVLGAKLSGKPHSKAANE----TTAVKWVMRCCPELPRSLVQKLF 121

Query: 121 RLRQVRRECLEGDVYSSG-DAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYE 180
           RLRQVRRE    +V   G   Q  +LKRVGAKD++N G+RIFLP SV+     K++    
Sbjct: 122 RLRQVRRESHVLEVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSVREFREEKQESG-- 181

Query: 181 CSEAEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLV 240
           C+E E+NFIR LELYKD AII +NKPP +PVQGG+GIK SLD+LAA  L +D  EPPRLV
Sbjct: 182 CTEEELNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEPPRLV 241

Query: 241 HRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPK 300
           HRLDRDSSGILVMGRTQ S  ILHSVFRE+T   +KD +VD  KRILQKRY ALV G P+
Sbjct: 242 HRLDRDSSGILVMGRTQMSATILHSVFREETNDASKD-DVDNEKRILQKRYWALVIGSPR 301

Query: 301 HVKGLISVPLAKVLVDDGKSERITVADNAS--SSQQAVTEYRVIESSSYGYTWLELSPVT 360
             KG+I  PL KV+VDDGKS+RITV DN+   SSQ+A TEY+VI+++S+GYTWLELSP+T
Sbjct: 302 RPKGMIVAPLRKVVVDDGKSDRITVFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSPLT 361

Query: 361 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLP-----SIPDEKFVEAKADPLGLNL 420
           GRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRW+ LP        ++K  E    P GLN+
Sbjct: 362 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWQHLPESDLKKSSNDKCPEENMLPFGLNM 421

Query: 421 ECGSISEKQPHLHLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWN 471
           + GSIS K+P LHLHC++M  PN+S AL+++    ++D SKL+++ +VAPLP +MQ+SW+
Sbjct: 422 DSGSISAKRPRLHLHCREMIFPNVSQALQNLQLSTDHDLSKLKSLEVVAPLPSYMQKSWD 475

[Close]

BLAST of Spo10122.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKG1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_168390 PE=4 SV=1)

HSP 1 Score: 961.4 bits (2484), Expect = 4.000e-277
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 1

		  
Query: 1   MAGPSFLRQILRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWV 60
           MAGPSFLRQILRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWV
Sbjct: 1   MAGPSFLRQILRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWV 60

Query: 61  TLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQ 120
           TLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQ
Sbjct: 61  TLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQ 120

Query: 121 VRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAE 180
           VRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAE
Sbjct: 121 VRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAE 180

Query: 181 MNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDR 240
           MNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDR
Sbjct: 181 MNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDR 240

Query: 241 DSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGL 300
           DSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGL
Sbjct: 241 DSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGL 300

Query: 301 ISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLR 360
           ISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLR
Sbjct: 301 ISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLR 360

Query: 361 VHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQPHL 420
           VHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQPHL
Sbjct: 361 VHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQPHL 420

Query: 421 HLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS 479
           HLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS
Sbjct: 421 HLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS 478

[Close]

BLAST of Spo10122.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJF6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223790 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 1.700e-203
Identity = 361/480 (75.21%), Postives = 403/480 (83.96%), Query Frame = 1

		  
Query: 1   MAGPSFLRQILRSSAA-SAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGG-RGKGK 60
           M  P   RQ+LRS AA + A + E  FKQ  Y F SAAVK E HE  EKN  G  R KGK
Sbjct: 1   MGKPFLFRQLLRSPAADTVAAQIETFFKQQCYRFTSAAVKVEAHESPEKNVGGSERNKGK 60

Query: 61  WVTLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRL 120
           WVTL PF  TVN  SLGRR+SRR+IEE NE I+TTT ALKWV+RCCPHLPQSLVQKLFRL
Sbjct: 61  WVTLTPFIPTVNAPSLGRRISRRNIEEGNEIIETTTCALKWVLRCCPHLPQSLVQKLFRL 120

Query: 121 RQVRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSE 180
           RQVRREC+E DV  S DA+E RL+RVGAKD M KGERIFLPI+VQGS PVKK+ +Y+CS+
Sbjct: 121 RQVRRECMEEDVDCSADAKERRLRRVGAKDLMKKGERIFLPITVQGS-PVKKR-EYKCSD 180

Query: 181 AEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRL 240
            E++FIR LELYKDSAIIAINKPPKLPVQGG+GIKKSLDELAAT L+YD  +PPRLVHRL
Sbjct: 181 EELDFIRGLELYKDSAIIAINKPPKLPVQGGIGIKKSLDELAATCLKYDFKDPPRLVHRL 240

Query: 241 DRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVK 300
           D DSSG+LVMGRTQTS  ILHS+FREKTIGI++D+E+DWGK+ILQKRYLALVFGVPK  K
Sbjct: 241 DSDSSGVLVMGRTQTSATILHSIFREKTIGISEDREIDWGKKILQKRYLALVFGVPKQSK 300

Query: 301 GLISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQ 360
           GLISVPLAKV+++DGKSERIT++D+ASSSQ AVTEYRVI +S YGYTWLEL PVTGRKHQ
Sbjct: 301 GLISVPLAKVVLNDGKSERITISDSASSSQHAVTEYRVIATSVYGYTWLELCPVTGRKHQ 360

Query: 361 LRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQP 420
           LRVHCAEVL TPIVGDYKYGWQAHRRWEPL   P+E+  E K  PLG+  ECGSISEKQP
Sbjct: 361 LRVHCAEVLRTPIVGDYKYGWQAHRRWEPLQPSPNEQSGETKLHPLGIGPECGSISEKQP 420

Query: 421 HLHLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLKFLAQQDS 479
           HLHLHCKQM LPNIS  L+ +S D EYDFSKLE++NLVAPLP HMQRSWNLL  LAQ+ S
Sbjct: 421 HLHLHCKQMVLPNISTILEQISLDSEYDFSKLESLNLVAPLPSHMQRSWNLLNSLAQRSS 478

[Close]

BLAST of Spo10122.1 vs. UniProtKB/TrEMBL
Match: D7UBZ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0180g00270 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 2.700e-148
Identity = 276/452 (61.06%), Postives = 331/452 (73.23%), Query Frame = 1

		  
Query: 33  FASAAVKEETHELTEKNDSGGRG----KGKWVTLPPFTSTVNTDSLGRRLS--RRDIEEA 92
           F  +A+ ++       ND+        KGKW TLP FT  V+  SLG+ LS  R D+   
Sbjct: 26  FCISALDQQRSCFATSNDAVSEAHKSKKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTG 85

Query: 93  NESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQVRRECLEGDVYSSG-DAQEFRLKRVG 152
           N +   +T+ALKWV+RCCP LP+SLVQKLFRLRQVRRE         G   QE RLKRV 
Sbjct: 86  NTTAGASTTALKWVVRCCPQLPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVA 145

Query: 153 AKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAEMNFIRSLELYKDSAIIAINKPPKLP 212
           AKD MN G++I LPI+V+   P +K  +Y C++ E+NF+ +LELYKD AII +NKPP LP
Sbjct: 146 AKDLMNLGDQILLPITVE-EFPSEKH-EYHCNDEEINFVHNLELYKDPAIIVVNKPPGLP 205

Query: 213 VQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREK 272
           VQGG+GIK+SLDELAAT LRYD  EPPRLVHRLDRDSSGIL+MGRTQTS  ILHS+FREK
Sbjct: 206 VQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSIFREK 265

Query: 273 TIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGLISVPLAKVLVDDGKSERITVADNAS 332
           T G   + ++D  KRILQ+RY ALV G P+  +GLIS PL KV+VDDGKSERIT+ DN  
Sbjct: 266 TFG-ASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVDNVQ 325

Query: 333 --SSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 392
             SSQ A+TEYRVI+SS +GYTWLELSP+TGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR
Sbjct: 326 TMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 385

Query: 393 RWEPL-----PSIPDEKFVEAKADPLGLNLECGSISEKQPHLHLHCKQMNLPNISVALKH 452
           +W+ L         DE     K  P GL+LE GSI +KQPHLHLHCKQM LPN+S+AL++
Sbjct: 386 KWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQN 445

Query: 453 VSPDMEYDFSKLETINLVAPLPLHMQRSWNLL 471
           +    E D S+LE++  VAPLP HMQRSW++L
Sbjct: 446 LQLSAECDLSELESLEFVAPLPSHMQRSWDIL 474

[Close]

BLAST of Spo10122.1 vs. UniProtKB/TrEMBL
Match: A0A061E066_THECC (Ribosomal pseudouridine synthase, putative OS=Theobroma cacao GN=TCM_007143 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 1.800e-144
Identity = 277/482 (57.47%), Postives = 347/482 (71.99%), Query Frame = 1

		  
Query: 1   MAGPSFLRQILRSSAASAATKTENL----FKQPRYHFASAAVKEETHELTEKNDSGGRGK 60
           + GP+ LR++LRSS   A      L    F Q RYH+++       H L +  +S  + K
Sbjct: 2   LVGPNLLRRLLRSSRPPATHGGNGLIVSAFHQLRYHYSTTNELSAEH-LKDDGNSEKKKK 61

Query: 61  GKWVTLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLF 120
            KW TLPPFT TVN   LG +LS +   +A       T+A+KWV+RCCP LP+SLVQKLF
Sbjct: 62  NKWFTLPPFTKTVNASVLGAKLSGKPHSKAANE----TTAVKWVMRCCPELPRSLVQKLF 121

Query: 121 RLRQVRRECLEGDVYSSG-DAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYE 180
           RLRQVRRE    +V   G   Q  +LKRVGAKD++N G+RIFLP SV+     K++    
Sbjct: 122 RLRQVRRESHVLEVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSVREFREEKQESG-- 181

Query: 181 CSEAEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLV 240
           C+E E+NFIR LELYKD AII +NKPP +PVQGG+GIK SLD+LAA  L +D  EPPRLV
Sbjct: 182 CTEEELNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEPPRLV 241

Query: 241 HRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPK 300
           HRLDRDSSGILVMGRTQ S  ILHSVFRE+T   +KD +VD  KRILQKRY ALV G P+
Sbjct: 242 HRLDRDSSGILVMGRTQMSATILHSVFREETNDASKD-DVDNEKRILQKRYWALVIGSPR 301

Query: 301 HVKGLISVPLAKVLVDDGKSERITVADNAS--SSQQAVTEYRVIESSSYGYTWLELSPVT 360
             KG+I  PL KV+VDDGKS+RITV DN+   SSQ+A TEY+VI+++S+GYTWLELSP+T
Sbjct: 302 RPKGMIVAPLRKVVVDDGKSDRITVFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSPLT 361

Query: 361 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLP-----SIPDEKFVEAKADPLGLNL 420
           GRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRW+ LP        ++K  E    P GLN+
Sbjct: 362 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWQHLPESDLKKSSNDKCPEENMLPFGLNM 421

Query: 421 ECGSISEKQPHLHLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWN 471
           + GSIS K+P LHLHC++M  PN+S AL+++    ++D SKL+++ +VAPLP +MQ+SW+
Sbjct: 422 DSGSISAKRPRLHLHCREMIFPNVSQALQNLQLSTDHDLSKLKSLEVVAPLPSYMQKSWD 475

[Close]

BLAST of Spo10122.1 vs. UniProtKB/TrEMBL
Match: M5VIW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004969mg PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 3.400e-143
Identity = 285/491 (58.04%), Postives = 344/491 (70.06%), Query Frame = 1

		  
Query: 1   MAGPSFLRQILRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWV 60
           M GP  LR++L     S+   T  L     +++ S A  E  HE  EK     RG+ KW 
Sbjct: 1   MMGPILLRRLLLRPPPSS---TARLCISAFHNWRSYATTETFHEDREK-----RGE-KWF 60

Query: 61  TLPPFTSTVNTDSLGRRLSR-----RDI---EEANESIKTTTSALKWVIRCCPHLPQSLV 120
           TLPPFT+T+N  +LG+ LSR     RD+        +  TTT+ALKWV RCCP LP+SLV
Sbjct: 61  TLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLV 120

Query: 121 QKLFRLRQVRRECLEGDVYSSG-DAQEFRLKRVGAKDSMNKGERIFLPISVQG------S 180
           QKLFRLRQVRRE  + +    G +A E  LKRV AKDSMN G+RI LP+SVQ        
Sbjct: 121 QKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPNDKQE 180

Query: 181 SPVKKQPKYECSEAEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLR 240
            P  K+  Y CSE E+ FIRSLELYKD AII INKPP +PVQGG+GIK+SLDELAA  L 
Sbjct: 181 LPNDKKECY-CSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAAACLS 240

Query: 241 YDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKR 300
           YD  EPPRLVHRLDRDSSGILVMGRTQTS  +LHS+FREKT G + D E+D  KRILQ+R
Sbjct: 241 YDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASND-EIDDAKRILQRR 300

Query: 301 YLALVFGVPKHVKGLISVPLAKVLVDDGKSERITVADNASS--SQQAVTEYRVIESSSYG 360
           Y ALV G P+  KGLIS PL KV+VD+GKS+RIT+ +++ +  SQ A+T+Y+VI S   G
Sbjct: 301 YWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVIGSPCPG 360

Query: 361 YTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPL-----PSIPDEKFVE 420
           YTWLEL+P+TGRKHQLRVHCAEVL TPIVGDYKYGWQ HR W+PL         DE+F +
Sbjct: 361 YTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAWSNNECHSDEEFPK 420

Query: 421 AKADPLGLNLECGSISEKQPHLHLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAP 470
            K  P  LN+E GS+SEK P LHLHCKQM LPN+++AL++V    + D S+LE++ LVA 
Sbjct: 421 RKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHSDSDLSELESLELVAA 480

[Close]

BLAST of Spo10122.1 vs. ExPASy Swiss-Prot
Match: PUS4_ARATH (RNA pseudouridine synthase 4, mitochondrial OS=Arabidopsis thaliana GN=At3g19440 PE=2 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.300e-127
Identity = 246/474 (51.90%), Postives = 328/474 (69.20%), Query Frame = 1

		  
Query: 7   LRQILRSSAASAATKTENLFKQPRYHFASAAVKE-ETHELTEKNDSGGRGKGKWVTLPPF 66
           LR+ L+SS+ + +T     FK P    ++AA +   ++  T+ +DS    +GKW+TLPPF
Sbjct: 11  LRRQLQSSSPTIST-----FKNPTKALSAAAHQSTRSYSTTQTDDS----RGKWLTLPPF 70

Query: 67  TSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQVRREC 126
           + T++  ++G+ L        + +  + T+AL+W++RC P LP++LVQKLFRLRQVRRE 
Sbjct: 71  SPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRREM 130

Query: 127 ---LEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVK---KQPKYECSEA 186
              ++GD     + Q  +LKRV AK+S+N G+RI+LP+SV   +P     K+  ++CS+ 
Sbjct: 131 SMSVDGD-----ELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDE 190

Query: 187 EMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLD 246
           E  F+ SL LYKD AII +NKP  L VQGG GIK S+DELAA+ L++D  E PRLVHRLD
Sbjct: 191 ERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLVHRLD 250

Query: 247 RDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKG 306
           RD SG+LV+ RTQT+  +LHS+FREKT G +    V    + L+++Y+ALV G P   +G
Sbjct: 251 RDCSGLLVLARTQTAATVLHSIFREKTTGASA-YGVKKNVKSLKRKYMALVIGCPPRQRG 310

Query: 307 LISVPLAKVLVDDGKSERITVADNAS--SSQQAVTEYRVIESSSYGYTWLELSPVTGRKH 366
            IS PL KV+VDDGKSERITV DN    S+Q A+TEYRVIESS +GYTWLEL P+TGRKH
Sbjct: 311 QISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRKH 370

Query: 367 QLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQ 426
           QLRVHCAEVLGTPIVGDYKYGWQAH+  EP  S  +    +  + P GL+L+ G +S KQ
Sbjct: 371 QLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVS-SENNPTKQSSSPFGLDLDGGDVSSKQ 430

Query: 427 PHLHLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLK 472
           PHLHLH KQ++LPNIS  L+ +    + D S L+++   APLP HMQ S+NLLK
Sbjct: 431 PHLHLHSKQIDLPNISQLLEKMQVSSDSDISDLDSLKFDAPLPSHMQLSFNLLK 468

[Close]

BLAST of Spo10122.1 vs. ExPASy Swiss-Prot
Match: PUS3_ORYSJ (RNA pseudouridine synthase 3, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0520100 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.100e-82
Identity = 174/429 (40.56%), Postives = 249/429 (58.04%), Query Frame = 1

		  
Query: 60  VTLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLR 119
           ++LPPF    + D L  R +         +     +A+ WV      +PQ +VQ  F  R
Sbjct: 54  LSLPPFPGGGDGDPLPGRKA---------AAPRRVTAVSWVKHYLADVPQEVVQAHFNKR 113

Query: 120 QVRRECLEGDV-YSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYEC-- 179
            V  EC + +V   +  +Q+  LK++   D M  G RI LP+SV     +KK  +YE   
Sbjct: 114 LVYSECSDHEVSVETIKSQKHHLKKIKHNDVMEPGMRIHLPVSV-AEGEIKK--RYETIP 173

Query: 180 ------SEAEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVME 239
                 ++ E+ ++R L ++KDSAI+ +NKPPK+P++G L +  S+D LAA +L Y   E
Sbjct: 174 TATLHPNKDEIEYLRRLVIHKDSAILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEE 233

Query: 240 PPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALV 299
            P+LVHRLDR+SSG+L+ GRT+ S   LH +F    +  T  +  +       +RY ALV
Sbjct: 234 GPKLVHRLDRESSGLLLFGRTKESFTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALV 293

Query: 300 FGVPKHVKGLISVPLAKVLVDDGKSERITVA--DNASSSQQAVTEYRVIESSSYGYTWLE 359
            G PK  +G+IS PL+KVL+DDGK+ER+ +A       +Q+AVT YRV+  + +G +W+E
Sbjct: 294 IGTPKEREGIISAPLSKVLLDDGKAERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIE 353

Query: 360 LSPVTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAK---ADPLG 419
           L P+TGRKHQLRVHCAE LGTPIVGDYKYGW  H+RW+  P    E F         P G
Sbjct: 354 LRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEG 413

Query: 420 LNLECGSISEKQPHLHLHCKQMNLPNISVALKHVSPDME----YDFSKLETINLVAPLPL 471
           L ++ GS+  K P LHLHC++M +PNI+  L       E    +   K   +  +AP+P 
Sbjct: 414 LEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSSNGEWHENGAPWSKEKPNLLRFIAPMPA 470

[Close]

BLAST of Spo10122.1 vs. ExPASy Swiss-Prot
Match: PUS4_ORYSJ (RNA pseudouridine synthase 4, mitochondrial OS=Oryza sativa subsp. japonica GN=Os09g0103500 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.800e-82
Identity = 172/351 (49.00%), Postives = 239/351 (68.09%), Query Frame = 1

		  
Query: 11  LRSSAASAATKTENLFKQPRYHFASAAVKEETHELTEKNDSGGRGKGKWVTLPPFTSTVN 70
           LR  AA+AA     +  +P++  A+AA +       +  ++G RGK  W+ LPPF + ++
Sbjct: 7   LRRRAAAAALA--GVAPKPQW-LATAARRGALVSGDDGGETGERGKSPWLQLPPF-APLD 66

Query: 71  TDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQVRRECLEGDV 130
             +  R +SR   E  +     T  A+KWV RCCP LP SLVQKLFRLR+V++  +  ++
Sbjct: 67  AAAAARAISRGGGEGGDGEQGAT--AIKWVRRCCPDLPTSLVQKLFRLRKVKKNVVTAEI 126

Query: 131 YSS-GDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPKYECSEAEMNFIRSLEL 190
            S+   A++ RL+RV AKD +  G+ +FLP++++ SS  +K  K++ +  E+NF+R LE+
Sbjct: 127 SSADASAEQHRLRRVSAKDQLMPGDILFLPVNLKESSVAEKTKKFD-NRNEINFLRGLEI 186

Query: 191 YKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLDRDSSGILVMG 250
           YKD AII +NKPP +PVQGG+GIK S+D L A+    +  E PRLVHRLDRD SGILV+G
Sbjct: 187 YKDEAIIVVNKPPGMPVQGGVGIKNSIDVL-ASMFEENSSEAPRLVHRLDRDCSGILVLG 246

Query: 251 RTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGLISVPLAKVL 310
           R Q ST++LH++FREK    T D   D  + +LQ++Y+ALV G P+H KGL+S PLAK+L
Sbjct: 247 RNQLSTSMLHAIFREK----TADALADGTQHVLQRKYVALVIGTPRHPKGLLSAPLAKIL 306

Query: 311 VDDGKSERITV--ADNASSSQQAVTEYRVIESSSYGYTWLELSPVTGRKHQ 359
           + DGKSER+T+  + NA+S Q A+TEYRVIES   GYTWLEL P TGRKHQ
Sbjct: 307 LQDGKSERLTIRASSNAASVQDALTEYRVIESCPQGYTWLELFPRTGRKHQ 345

[Close]

BLAST of Spo10122.1 vs. ExPASy Swiss-Prot
Match: PUS3_ARATH (RNA pseudouridine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 6.600e-76
Identity = 161/385 (41.82%), Postives = 233/385 (60.52%), Query Frame = 1

		  
Query: 106 HLPQSLVQKLFR-LRQVRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQG 165
           H  + LVQ  FR  R   RE  +G +          ++++   + M  G++I+LP+S+  
Sbjct: 102 HFTKGLVQMEFRGRRDASREKEDGAI---------PMRKIKHNEVMQIGDKIWLPVSI-- 161

Query: 166 SSPVKKQPKYECSEA--------EMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSL 225
            + ++   +Y+   +        E+ +++ L  +KDSAII +NKPPKLPV+G + I  S+
Sbjct: 162 -AEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSM 221

Query: 226 DELAATSLRYDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVD 285
           D LAA +L +   E PRLVHRLDR++SG+LVMGRT+ S   LHSVF +     +  K  +
Sbjct: 222 DALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWN 281

Query: 286 WGKRILQKRYLALVFGVPKHVKGLISVPLAKVLVDDGKSERITVADNA--SSSQQAVTEY 345
                + ++Y ALV G PK  +GLIS PL+KVL+DDGK++R+ +A  +   +SQ A+TEY
Sbjct: 282 KACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEY 341

Query: 346 RVIESSSYGYTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDE 405
           +V+     G +W+EL P+T RKHQLRVHCAE LGTPIVGDYKYGW  H+RW+ +P +  E
Sbjct: 342 KVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIE 401

Query: 406 KFVEAK---ADPLGLNLECGSISEKQPHLHLHCKQMNLPNISVALKHVSPDMEYD----- 465
                      P GL+++ GS+  K P LHLHC++M LPNI+  L HV    E +     
Sbjct: 402 PTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFL-HVMNQQETEPLHTG 461

Query: 466 -FSKLETINLVAPLPLHMQRSWNLL 471
              K + +  VA +P HM+ SWNL+
Sbjct: 462 IIDKPDLLRFVASMPSHMKISWNLM 473

[Close]

BLAST of Spo10122.1 vs. ExPASy Swiss-Prot
Match: RLUC_RICTY (Ribosomal large subunit pseudouridine synthase C OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=rluC PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.700e-26
Identity = 87/285 (30.53%), Postives = 145/285 (50.88%), Query Frame = 1

		  
Query: 98  KWVIRCCPHLPQSLVQKLFRLRQVRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIF 157
           K++ R  P L Q +++K  R +QV                    ++  A   + +G+ IF
Sbjct: 15  KYLKRLYPSLTQGVIEKALRQKQVT----------------VNFQKAEANLRVKEGDTIF 74

Query: 158 LPISVQGSSPVKKQPKYECSEAEMNFIRSLE----LYKDSAIIAINKPPKLPVQGGLGIK 217
             I+   + PV +      ++AE+   + +     +Y+D  +IAINKP  L  QGG  I 
Sbjct: 75  --INDYFNLPVTQHETLVFADAEIKLAKKILTDYLIYEDDHLIAINKPASLATQGGSKIN 134

Query: 218 KSLDELAATSLRYDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDK 277
            S+D  A   L Y   +  +LVHRLD+++SG+L++ +   S+  LH  F+EK        
Sbjct: 135 LSIDS-ALKYLNYQGADF-KLVHRLDKETSGLLLIAKNYLSSVKLHDAFKEK-------- 194

Query: 278 EVDWGKRILQKRYLALVFGVPKHVKGLISVPLAKVLVDDGKSERITVADNASSSQQAVTE 337
                  ++ K+Y A+ +G P    G++   + K     G+  +IT  D + + + A+T 
Sbjct: 195 -------LVIKKYFAITYGRPVKNVGIVKSNIGK---SKGRMFKITDID-SDNGKLAITY 254

Query: 338 YRVIESSSYGYTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYG 379
           Y++++S +     +E  PVTGR HQLR+H A++LG PI+GD KYG
Sbjct: 255 YKLLKSLNNNLFLIEFMPVTGRMHQLRLH-AQLLGCPILGDDKYG 259

[Close]

BLAST of Spo10122.1 vs. TAIR (Arabidopsis)
Match: AT3G19440.1 (Pseudouridine synthase family protein)

HSP 1 Score: 458.0 bits (1177), Expect = 7.200e-129
Identity = 246/474 (51.90%), Postives = 328/474 (69.20%), Query Frame = 1

		  
Query: 7   LRQILRSSAASAATKTENLFKQPRYHFASAAVKE-ETHELTEKNDSGGRGKGKWVTLPPF 66
           LR+ L+SS+ + +T     FK P    ++AA +   ++  T+ +DS    +GKW+TLPPF
Sbjct: 11  LRRQLQSSSPTIST-----FKNPTKALSAAAHQSTRSYSTTQTDDS----RGKWLTLPPF 70

Query: 67  TSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFRLRQVRREC 126
           + T++  ++G+ L        + +  + T+AL+W++RC P LP++LVQKLFRLRQVRRE 
Sbjct: 71  SPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRREM 130

Query: 127 ---LEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVK---KQPKYECSEA 186
              ++GD     + Q  +LKRV AK+S+N G+RI+LP+SV   +P     K+  ++CS+ 
Sbjct: 131 SMSVDGD-----ELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDE 190

Query: 187 EMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLVHRLD 246
           E  F+ SL LYKD AII +NKP  L VQGG GIK S+DELAA+ L++D  E PRLVHRLD
Sbjct: 191 ERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLVHRLD 250

Query: 247 RDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKG 306
           RD SG+LV+ RTQT+  +LHS+FREKT G +    V    + L+++Y+ALV G P   +G
Sbjct: 251 RDCSGLLVLARTQTAATVLHSIFREKTTGASA-YGVKKNVKSLKRKYMALVIGCPPRQRG 310

Query: 307 LISVPLAKVLVDDGKSERITVADNAS--SSQQAVTEYRVIESSSYGYTWLELSPVTGRKH 366
            IS PL KV+VDDGKSERITV DN    S+Q A+TEYRVIESS +GYTWLEL P+TGRKH
Sbjct: 311 QISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRKH 370

Query: 367 QLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQ 426
           QLRVHCAEVLGTPIVGDYKYGWQAH+  EP  S  +    +  + P GL+L+ G +S KQ
Sbjct: 371 QLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVS-SENNPTKQSSSPFGLDLDGGDVSSKQ 430

Query: 427 PHLHLHCKQMNLPNISVALKHVSPDMEYDFSKLETINLVAPLPLHMQRSWNLLK 472
           PHLHLH KQ++LPNIS  L+ +    + D S L+++   APLP HMQ S+NLLK
Sbjct: 431 PHLHLHSKQIDLPNISQLLEKMQVSSDSDISDLDSLKFDAPLPSHMQLSFNLLK 468

[Close]

BLAST of Spo10122.1 vs. TAIR (Arabidopsis)
Match: AT1G78910.1 (Pseudouridine synthase family protein)

HSP 1 Score: 286.2 bits (731), Expect = 3.700e-77
Identity = 161/385 (41.82%), Postives = 233/385 (60.52%), Query Frame = 1

		  
Query: 106 HLPQSLVQKLFR-LRQVRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQG 165
           H  + LVQ  FR  R   RE  +G +          ++++   + M  G++I+LP+S+  
Sbjct: 102 HFTKGLVQMEFRGRRDASREKEDGAI---------PMRKIKHNEVMQIGDKIWLPVSI-- 161

Query: 166 SSPVKKQPKYECSEA--------EMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSL 225
            + ++   +Y+   +        E+ +++ L  +KDSAII +NKPPKLPV+G + I  S+
Sbjct: 162 -AEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSM 221

Query: 226 DELAATSLRYDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVD 285
           D LAA +L +   E PRLVHRLDR++SG+LVMGRT+ S   LHSVF +     +  K  +
Sbjct: 222 DALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWN 281

Query: 286 WGKRILQKRYLALVFGVPKHVKGLISVPLAKVLVDDGKSERITVADNA--SSSQQAVTEY 345
                + ++Y ALV G PK  +GLIS PL+KVL+DDGK++R+ +A  +   +SQ A+TEY
Sbjct: 282 KACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEY 341

Query: 346 RVIESSSYGYTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLPSIPDE 405
           +V+     G +W+EL P+T RKHQLRVHCAE LGTPIVGDYKYGW  H+RW+ +P +  E
Sbjct: 342 KVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIE 401

Query: 406 KFVEAK---ADPLGLNLECGSISEKQPHLHLHCKQMNLPNISVALKHVSPDMEYD----- 465
                      P GL+++ GS+  K P LHLHC++M LPNI+  L HV    E +     
Sbjct: 402 PTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFL-HVMNQQETEPLHTG 461

Query: 466 -FSKLETINLVAPLPLHMQRSWNLL 471
              K + +  VA +P HM+ SWNL+
Sbjct: 462 IIDKPDLLRFVASMPSHMKISWNLM 473

[Close]

BLAST of Spo10122.1 vs. TAIR (Arabidopsis)
Match: AT1G76050.2 (Pseudouridine synthase family protein)

HSP 1 Score: 72.4 bits (176), Expect = 8.500e-13
Identity = 47/163 (28.83%), Postives = 81/163 (49.69%), Query Frame = 1

		  
Query: 217 DELAATSLRYDVMEPPRLVHRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVD 276
           +E+  +   Y     P +VHRLD+ ++G+LV+ + + S A L   F+  TI         
Sbjct: 212 EEMTTSPSSYAASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHTI--------- 271

Query: 277 WGKRILQKRYLALVFGVPKHVKGLISVPLAKVLVDDGKSERITVADNASSSQQAVTEYRV 336
                 ++ Y++L  GVP   +G I +P+ +   +  +   I        ++ A + Y+V
Sbjct: 272 ------ERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGGRARHAASRYKV 331

Query: 337 IES-SSYGYTWLELSPVTGRKHQLRVHCAEVLGTPIVGDYKYG 379
           IE+ +  G   +E    TGR HQ+R H A+ +G P++GD  YG
Sbjct: 332 IETFAGGGSALVEWRLETGRTHQIRAH-AKYMGVPLLGDEVYG 358

[Close]

BLAST of Spo10122.1 vs. TAIR (Arabidopsis)
Match: AT5G51140.2 (Pseudouridine synthase family protein)

HSP 1 Score: 55.8 bits (133), Expect = 8.200e-8
Identity = 55/202 (27.23%), Postives = 90/202 (44.55%), Query Frame = 1

		  
Query: 189 LYKDSAIIAINKPPKLPVQG-GLGIKKSLDELAATSLRYDVMEPPRLVHRLDRDSSGILV 248
           L+++  ++ + KP  +PV   G   K ++  +         + P   +HRLDR  SG+L+
Sbjct: 139 LHQEPDVVTVCKPASVPVHPCGQYRKNTIVGILDAEHDLGTLFP---IHRLDRLVSGLLI 198

Query: 249 MGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPKHVKGLISVPLAK 308
           + RT          FR++  G            +++KRY+A V GV          P  +
Sbjct: 199 IARTAAKA----DFFRQQIEG-----------GMVKKRYIAKVIGV---------FPEDE 258

Query: 309 VLVD-----DGKSERITVADNASSSQQ-------AVTEYRVIESSSYGYTWLELSPVTGR 368
           ++VD     +G   R T  D  SS          A T++  I+++   ++ +   PVTGR
Sbjct: 259 MIVDANINYNGSEGRSTAEDANSSGDDKKVKGKPACTKFTRIDTNGT-HSLVSCEPVTGR 311

Query: 369 KHQLRVHCAEVLGTPIVGDYKY 378
            HQ+RVH  +  G PI  D  Y
Sbjct: 319 THQIRVH-LQYTGHPIANDPLY 311

The following BLAST results are available for this feature:

BLAST of Spo10122.1 vs. NCBI nr
BLAST of Spo10122.1 vs. UniProtKB/TrEMBL
BLAST of Spo10122.1 vs. ExPASy Swiss-Prot
BLAST of Spo10122.1 vs. TAIR (Arabidopsis)

BLAST of Spo10122.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902169920\|gb\|KNA07729.1\|	5.7e-277	100.	hypothetical protein SOVF_1683...	[more]
gi\|731360178\|ref\|XP_010691670.1\|	2.4e-203	75.2	PREDICTED: RNA pseudouridine s...	[more]
gi\|225428918\|ref\|XP_002282614.1\|	3.8e-148	61.0	PREDICTED: RNA pseudouridine s...	[more]
gi\|719970391\|ref\|XP_010271251.1\|	2.5e-147	63.1	PREDICTED: RNA pseudouridine s...	[more]
gi\|590686974\|ref\|XP_007042534.1\|	2.6e-144	57.4	Ribosomal pseudouridine syntha...	[more]

BLAST of Spo10122.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QKG1_SPIOL	4.0e-277	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BJF6_BETVU	1.7e-203	75.2	Uncharacterized protein OS=Bet...	[more]
D7UBZ2_VITVI	2.7e-148	61.0	Putative uncharacterized prote...	[more]
A0A061E066_THECC	1.8e-144	57.4	Ribosomal pseudouridine syntha...	[more]
M5VIW4_PRUPE	3.4e-143	58.0	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo10122.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
PUS4_ARATH	1.3e-127	51.9	RNA pseudouridine synthase 4, ...	[more]
PUS3_ORYSJ	2.1e-82	40.5	RNA pseudouridine synthase 3, ...	[more]
PUS4_ORYSJ	2.8e-82	49.0	RNA pseudouridine synthase 4, ...	[more]
PUS3_ARATH	6.6e-76	41.8	RNA pseudouridine synthase 3, ...	[more]
RLUC_RICTY	3.7e-26	30.5	Ribosomal large subunit pseudo...	[more]

BLAST of Spo10122.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G19440.1	7.2e-129	51.9	Pseudouridine synthase family ...	[more]
AT1G78910.1	3.7e-77	41.8	Pseudouridine synthase family ...	[more]
AT1G76050.2	8.5e-13	28.8	Pseudouridine synthase family ...	[more]
AT5G51140.2	8.2e-8	27.2	Pseudouridine synthase family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006145	Pseudouridine synthase, RsuA/RluB/C/D/E/F	PFAM	PF00849	PseudoU_synth_2	coord: 195..364 score: 2.8
IPR020103	Pseudouridine synthase, catalytic domain	unknown	SSF55120	Pseudouridine synthase	coord: 188..387 score: 1.4E-41coord: 420..430 score: 1.4
None	No IPR available	PANTHER	PTHR11079	CYTOSINE DEAMINASE	coord: 177..266 score: 3.8E-143coord: 282..431 score: 3.8E-143coord: 447..471 score: 3.8E
None	No IPR available	PANTHER	PTHR11079:SF58	RNA PSEUDOURIDINE SYNTHASE 4, MITOCHONDRIAL	coord: 177..266 score: 3.8E-143coord: 282..431 score: 3.8E-143coord: 447..471 score: 3.8E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0009451	RNA modification
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006810	transport
biological_process	GO:0030001	metal ion transport
biological_process	GO:0033043	regulation of organelle organization
biological_process	GO:0006996	organelle organization
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0051276	chromosome organization
biological_process	GO:0022402	cell cycle process
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0006396	RNA processing
biological_process	GO:0009816	defense response to bacterium, incompatible interaction
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005622	intracellular
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016020	membrane
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004630	phospholipase D activity
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds
molecular_function	GO:0070290	N-acylphosphatidylethanolamine-specific phospholipase D activity
molecular_function	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06497	0.74	Barchart \| Table
Spo16378	0.74	Barchart \| Table
Spo18784	0.72	Barchart \| Table
Spo10211	0.71	Barchart \| Table
Spo12699	0.71	Barchart \| Table
Spo23092	0.71	Barchart \| Table
Spo00444	0.71	Barchart \| Table
Spo24936	0.70	Barchart \| Table
Spo06929	0.70	Barchart \| Table
Spo24916	0.70	Barchart \| Table
Spo01128	0.70	Barchart \| Table
Spo03008	0.70	Barchart \| Table
Spo00908	0.69	Barchart \| Table
Spo13487	0.69	Barchart \| Table
Spo24937	0.69	Barchart \| Table
Spo24416	0.69	Barchart \| Table
Spo25661	0.68	Barchart \| Table
Spo02105	0.68	Barchart \| Table
Spo02470	0.68	Barchart \| Table
Spo02993	0.68	Barchart \| Table
Spo06711	0.68	Barchart \| Table
Spo09307	0.68	Barchart \| Table
Spo23298	0.67	Barchart \| Table
Spo01478	0.67	Barchart \| Table
Spo06341	0.67	Barchart \| Table
Spo20235	0.67	Barchart \| Table
Spo04114	0.67	Barchart \| Table
Spo21818	0.66	Barchart \| Table
Spo15934	0.66	Barchart \| Table
Spo24064	0.66	Barchart \| Table
Spo00418	0.65	Barchart \| Table
Spo22275	0.65	Barchart \| Table
Spo07969	0.65	Barchart \| Table
Spo16463	0.65	Barchart \| Table