Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTAGATCAAGAATCTTATTTTATGTAACGCAATGTATTTAAACCTAAGTTAATTCGGAATAATAATAATATAATTGTATAAATACTTCATCAAATTGCAGCACACCAGACAACTAAAACAAAACCTCCCCTTTCTCTCTCCTCTCTTTCTCTATCGGGGAGTGGGCGGGTGTAGTTTTTTCAATCTTAATCCTAAACAAAATAACAAATTTGTATTACCTTTTATCAATTTTCCATTCTAATTATTTTTTTTTGAAAATTTACTCATTTTTTCTTTTGATTGTTGCGCAAAATTACGATTTTGAAATATACCTCTTTGAAATCAATTAATTGGTTTTGCTGCAAAGCCTCCGTTATTAAAAGAAAAACCCTAGCAAATTTTGTTATTTTTTTCTGTGATTTTACTATATGGAGTGGGATAAATTGAAAGTTTGTAATGGGAATGAAAATGGGTTTTTAACGAATTGCAATCTGGGGCTTCAATGGAGTATGCCAGAAGAGAATTCTAATTATAAAAGAGGATTGTTTGCAAATGTAGGGCAGGTGGGGTTTAGTGGTGGGGTATCTCCAAATCCTTCAAATCCAAAGGACAATGAAGGGGGTTTTAAGCTTCCATGTATGGATTTGTATGTAAAGTATGTTTCATCTCCAGAAGGGTTCAAAATTGTTGGGATTCCTGAGAATGAGAAAACCGCTAAGAAGAAGAAAAGTAGTCTTAAATTGAAGATTAAGGTTGCTAACCCTTCATTGAGGAGGCTGATTAGCGGGGCGATTGCCGGGGCGGTTTCGAGGACGGCTGTGGCACCACTGGAGACTATTAGGACTCATTTGATGGTTGGGAGTAGTGGACATTCTTCTACTGAAGTGTTCAAAGAAATTATGAAGACTGATGGTTGGACTGGATTGTTTTGTGGGAATTTGATTAATGTTATTCGGGTGGCTCCTAGTAAGGCTATTGAGGTATAACAAACCTTTCATTCTATTCAATCTTTTTTATGTTTTTTTTTAAATATTTTTGCTCTTAACATTGTTTTTTGGCCTAGTTGAAATAACAATGCAGTTTGTCTGCCTTGTTTTGGTTATTGGATGTTTTTTTGTTTAGGGGTTGATGCATGTGTTATTTGGGTAAATTCTTGTGAATGATTATGAGTTATGGGAAAGGTCATACAATTACAATTGAGGAATGCATTAGCGTGCAACTATTAGCCGATTTTAGCTAGTTAAATCTTTATCTATACTTGATTGCCTATCCTTCTATTGCAATCAGTATGATTCTTGTCTCTTGATGTGTACATCGAACTTACTCATTACTTACCTTTGACGATGAAGCGCGGTGGTTGTGGGGTTAGATTAAACTTTGCTGTCTTTTGCTGACCGACACTGCTCATTTTTTGGTGATATTACATCAGGACATCTTGCCCCTTGTTATGATATCAGTTTAAATGTATCAACTTTAAGTAAAGTGAACATCCTGATGAAGCTGTACATGTCATTGCTTTTAAACATTGCCATTGTGGTTTACTCAGCGGGAACAGATTGCTCTCCGCTTTCTTGCTAGTAAGAGTAGTAACCATTAAGTTTACATTGGTTGTGGTTCCCTATGCACTTCTCCCCTGAATAAGTTTCAAACCTTTACTATGTGAATGTTGAAAGATAATTCTCAACAATGAGGGAGAAGGAAAAGCTAGTTAAAGAATTATGGATGGTTATATTTTAGTTACTAAAAGACTGGAACATCGTGAAAAGTAGTATAAACTAACAAATTTTCTCTCGTTACTGTTTGAGGGATTGTTGAGGTGGATCCTTCATGGAGTATAAGTGCCGAAAGCAATATCATCCTTGAGCATTGTGTGAGACCACTAATCATAATTAACAGCTAGATTTTAACCTTTGTATTGCTTCTTTGCAAGGGTTTCCTCTAGTTGTCACATTGTGTGGAGTTGTGAAAATGTGGTGGATAATTCTGCTGCAGGTCAACAGTCGGGTTTTTGAGAGACATGGTGCTTGTACCAAACATTGAAGCAAAAAGTATGTTGTTTGCAAATCTCTATTTGACGAAGTTATCACCTAATGAATCGAGTAGCATTTCATTTTATTAACGGTTGGTTTTATGCATTTCTTAGGATTAATTTAGTTTCATAAATATTCACTTGAGCTATTGATAAATGTTATTAATTGCTAAATAATGGGAGATACTTTTCAGTAATTGTGGTTGATGATAGTGTTGATTTGATTTTCTAATTTAGTGAAGCGATTCTATGATTTTGCTTGAGTTTCTCGGCTTTCTCTTATTTTATTCCTGTTTTTGTTGTCAAATGATGATGAGTTACAGAATGCTGTAAAGTTTTGTGGTGAAATCCTTTTGAAAGCTGTCTGCTTGCTCTAAACATCTAATACGGGAAGAGGAGTGCTCTTCTATTATGCTAGCAAAACGTCCCGCTGACATCATAAAACTTTCATTGTTTCTTACTGTAATGCTCTCCTCGTTTCTGTTTATTGAGAATTTATTAGTCCTGCTAACATTGGTGATTTGTGAGTTAGTTTGAGCTCACATGAAGCTTGTTTGCTATAATGACTTTTTATAAATCATAACATGATATCAATATTGGTATAATATATGAGATGATCCATGAATGTACGCTCATAGTTCTCTCTATTTTTTGTATAGCTTCTTACATATGATACAGTGAATAAATTGTTGTCAACAAAGCAAGGAGAACAACCTAAAGTCCCTATCCCACCTTCACTTATTGCGGGGGCCTGTGCTGGGGTCTCTTCTACCATTTTGACATATCCTCTCGAGTTGGTGAAGACCCGATTAACCATACAGGTGCGTCCATCTTCTTATTACATTTATTCTTCTAGAAATATTATCCCACTTATGATTTGTATCATCATATCCTATGTGCTAAAATTAATTTACAGAGGGGTGTATACAACGGTATAGTTGATGCTTTTGTGAAGATTATACGCGAAGAAGGCGCTTCTGAGCTATACAGAGGCCTTGCCCCGAGCTTAATTGGAGTGATTCCATATGCTGCAACCAATTACTGTGCGTATGACACGCTGCGGAAAGCATATCGAAAATTCTTCAAGCAAGAGAAGATTGGCAACATAGAAACCCTGCTGATTGGTTCTTTGGCAGGTGCCATCTCCAGTACTGCAACTTTTCCTCTTGAGGTAGCAAGGAAGCATATGCAAGCAGGGGCTGTTAGTGGAAAGGTATACAAAAACGTGTTGCATGCTTTGGCTACTATCCTAGAGCAGGAAGGAGTACAAGGTCTTTATAGAGGTCTCGGCCCTAGTTGTGTCAAGTTGATGCCAGCTGCTGGGATTTCGTTTATGTGCTACGAAGCGTGCAAGAGGATACTGGTGGAAGATGAAGATGAGGCATAGGAGAGTTTTACCAATTGGAGTTTTTGTACGGCGATTTTACCTTCTGCAACTTTTGTTTTGTCACAAGGCCTTTGCTTGGACTTTGATTCAAATGGCCACTCTATAGGAGTTGATGCTTTTTTCTAGAGATATCACAGTTTTCTTTTTTTTCTTTTTTGGTTATGAAATGAAGTGAATAACATGCAGAAGGTTTAATTTTGGCTGGTGTTGATTAGTGAAATTTTGAGCAGTTTTGTTTACATGAATGGCAATTCAAGTAGCTGCATTGAAACATTTTTAACGGTGACTTGAATCTGTCGAATTGACCATTTTGTACATCACAGTGTCATCTTTGAAAGCTCCTTCTTAACCCAGAGTCCCA AGTAGATCAAGAATCTTATTTTATGTAACGCAATGTATTTAAACCTAAGTTAATTCGGAATAATAATAATATAATTGTATAAATACTTCATCAAATTGCAGCACACCAGACAACTAAAACAAAACCTCCCCTTTCTCTCTCCTCTCTTTCTCTATCGGGGAGTGGGCGGGTGTAGTTTTTTCAATCTTAATCCTAAACAAAATAACAAATTTGTATTACCTTTTATCAATTTTCCATTCTAATTATTTTTTTTTGAAAATTTACTCATTTTTTCTTTTGATTGTTGCGCAAAATTACGATTTTGAAATATACCTCTTTGAAATCAATTAATTGGTTTTGCTGCAAAGCCTCCGTTATTAAAAGAAAAACCCTAGCAAATTTTGTTATTTTTTTCTGTGATTTTACTATATGGAGTGGGATAAATTGAAAGTTTGTAATGGGAATGAAAATGGGTTTTTAACGAATTGCAATCTGGGGCTTCAATGGAGTATGCCAGAAGAGAATTCTAATTATAAAAGAGGATTGTTTGCAAATGTAGGGCAGGTGGGGTTTAGTGGTGGGGTATCTCCAAATCCTTCAAATCCAAAGGACAATGAAGGGGGTTTTAAGCTTCCATGTATGGATTTGTATGTAAAGTATGTTTCATCTCCAGAAGGGTTCAAAATTGTTGGGATTCCTGAGAATGAGAAAACCGCTAAGAAGAAGAAAAGTAGTCTTAAATTGAAGATTAAGGTTGCTAACCCTTCATTGAGGAGGCTGATTAGCGGGGCGATTGCCGGGGCGGTTTCGAGGACGGCTGTGGCACCACTGGAGACTATTAGGACTCATTTGATGGTTGGGAGTAGTGGACATTCTTCTACTGAAGTGTTCAAAGAAATTATGAAGACTGATGGTTGGACTGGATTGTTTTGTGGGAATTTGATTAATGTTATTCGGGTGGCTCCTAGTAAGGCTATTGAGCTTCTTACATATGATACAGTGAATAAATTGTTGTCAACAAAGCAAGGAGAACAACCTAAAGTCCCTATCCCACCTTCACTTATTGCGGGGGCCTGTGCTGGGGTCTCTTCTACCATTTTGACATATCCTCTCGAGTTGGTGAAGACCCGATTAACCATACAGAGGGGTGTATACAACGGTATAGTTGATGCTTTTGTGAAGATTATACGCGAAGAAGGCGCTTCTGAGCTATACAGAGGCCTTGCCCCGAGCTTAATTGGAGTGATTCCATATGCTGCAACCAATTACTGTGCGTATGACACGCTGCGGAAAGCATATCGAAAATTCTTCAAGCAAGAGAAGATTGGCAACATAGAAACCCTGCTGATTGGTTCTTTGGCAGGTGCCATCTCCAGTACTGCAACTTTTCCTCTTGAGGTAGCAAGGAAGCATATGCAAGCAGGGGCTGTTAGTGGAAAGGTATACAAAAACGTGTTGCATGCTTTGGCTACTATCCTAGAGCAGGAAGGAGTACAAGGTCTTTATAGAGGTCTCGGCCCTAGTTGTGTCAAGTTGATGCCAGCTGCTGGGATTTCGTTTATGTGCTACGAAGCGTGCAAGAGGATACTGGTGGAAGATGAAGATGAGGCATAGGAGAGTTTTACCAATTGGAGTTTTTGTACGGCGATTTTACCTTCTGCAACTTTTGTTTTGTCACAAGGCCTTTGCTTGGACTTTGATTCAAATGGCCACTCTATAGGAGTTGATGCTTTTTTCTAGAGATATCACAGTTTTCTTTTTTTTCTTTTTTGGTTATGAAATGAAGTGAATAACATGCAGAAGGTTTAATTTTGGCTGGTGTTGATTAGTGAAATTTTGAGCAGTTTTGTTTACATGAATGGCAATTCAAGTAGCTGCATTGAAACATTTTTAACGGTGACTTGAATCTGTCGAATTGACCATTTTGTACATCACAGTGTCATCTTTGAAAGCTCCTTCTTAACCCAGAGTCCCA ATGGAGTGGGATAAATTGAAAGTTTGTAATGGGAATGAAAATGGGTTTTTAACGAATTGCAATCTGGGGCTTCAATGGAGTATGCCAGAAGAGAATTCTAATTATAAAAGAGGATTGTTTGCAAATGTAGGGCAGGTGGGGTTTAGTGGTGGGGTATCTCCAAATCCTTCAAATCCAAAGGACAATGAAGGGGGTTTTAAGCTTCCATGTATGGATTTGTATGTAAAGTATGTTTCATCTCCAGAAGGGTTCAAAATTGTTGGGATTCCTGAGAATGAGAAAACCGCTAAGAAGAAGAAAAGTAGTCTTAAATTGAAGATTAAGGTTGCTAACCCTTCATTGAGGAGGCTGATTAGCGGGGCGATTGCCGGGGCGGTTTCGAGGACGGCTGTGGCACCACTGGAGACTATTAGGACTCATTTGATGGTTGGGAGTAGTGGACATTCTTCTACTGAAGTGTTCAAAGAAATTATGAAGACTGATGGTTGGACTGGATTGTTTTGTGGGAATTTGATTAATGTTATTCGGGTGGCTCCTAGTAAGGCTATTGAGCTTCTTACATATGATACAGTGAATAAATTGTTGTCAACAAAGCAAGGAGAACAACCTAAAGTCCCTATCCCACCTTCACTTATTGCGGGGGCCTGTGCTGGGGTCTCTTCTACCATTTTGACATATCCTCTCGAGTTGGTGAAGACCCGATTAACCATACAGAGGGGTGTATACAACGGTATAGTTGATGCTTTTGTGAAGATTATACGCGAAGAAGGCGCTTCTGAGCTATACAGAGGCCTTGCCCCGAGCTTAATTGGAGTGATTCCATATGCTGCAACCAATTACTGTGCGTATGACACGCTGCGGAAAGCATATCGAAAATTCTTCAAGCAAGAGAAGATTGGCAACATAGAAACCCTGCTGATTGGTTCTTTGGCAGGTGCCATCTCCAGTACTGCAACTTTTCCTCTTGAGGTAGCAAGGAAGCATATGCAAGCAGGGGCTGTTAGTGGAAAGGTATACAAAAACGTGTTGCATGCTTTGGCTACTATCCTAGAGCAGGAAGGAGTACAAGGTCTTTATAGAGGTCTCGGCCCTAGTTGTGTCAAGTTGATGCCAGCTGCTGGGATTTCGTTTATGTGCTACGAAGCGTGCAAGAGGATACTGGTGGAAGATGAAGATGAGGCATAG MEWDKLKVCNGNENGFLTNCNLGLQWSMPEENSNYKRGLFANVGQVGFSGGVSPNPSNPKDNEGGFKLPCMDLYVKYVSSPEGFKIVGIPENEKTAKKKKSSLKLKIKVANPSLRRLISGAIAGAVSRTAVAPLETIRTHLMVGSSGHSSTEVFKEIMKTDGWTGLFCGNLINVIRVAPSKAIELLTYDTVNKLLSTKQGEQPKVPIPPSLIAGACAGVSSTILTYPLELVKTRLTIQRGVYNGIVDAFVKIIREEGASELYRGLAPSLIGVIPYAATNYCAYDTLRKAYRKFFKQEKIGNIETLLIGSLAGAISSTATFPLEVARKHMQAGAVSGKVYKNVLHALATILEQEGVQGLYRGLGPSCVKLMPAAGISFMCYEACKRILVEDEDEA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10136.1 vs. NCBI nr
Match: gi|902189028|gb|KNA11278.1| (hypothetical protein SOVF_136720 [Spinacia oleracea]) HSP 1 Score: 785.4 bits (2027), Expect = 4.600e-224 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1
BLAST of Spo10136.1 vs. NCBI nr
Match: gi|731320144|ref|XP_010670648.1| (PREDICTED: adenine nucleotide transporter BT1, chloroplastic/mitochondrial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 667.2 bits (1720), Expect = 1.800e-188 Identity = 345/403 (85.61%), Postives = 364/403 (90.32%), Query Frame = 1
BLAST of Spo10136.1 vs. NCBI nr
Match: gi|661882902|emb|CDP13493.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 591.7 bits (1524), Expect = 9.700e-166 Identity = 303/394 (76.90%), Postives = 339/394 (86.04%), Query Frame = 1
BLAST of Spo10136.1 vs. NCBI nr
Match: gi|225430247|ref|XP_002285050.1| (PREDICTED: adenine nucleotide transporter BT1, chloroplastic/mitochondrial [Vitis vinifera]) HSP 1 Score: 585.5 bits (1508), Expect = 7.000e-164 Identity = 299/393 (76.08%), Postives = 339/393 (86.26%), Query Frame = 1
BLAST of Spo10136.1 vs. NCBI nr
Match: gi|147772995|emb|CAN73822.1| (hypothetical protein VITISV_005135 [Vitis vinifera]) HSP 1 Score: 585.1 bits (1507), Expect = 9.100e-164 Identity = 299/393 (76.08%), Postives = 338/393 (86.01%), Query Frame = 1
BLAST of Spo10136.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QX55_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136720 PE=3 SV=1) HSP 1 Score: 785.4 bits (2027), Expect = 3.200e-224 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1
BLAST of Spo10136.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FLL1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042830 PE=3 SV=1) HSP 1 Score: 667.2 bits (1720), Expect = 1.300e-188 Identity = 345/403 (85.61%), Postives = 364/403 (90.32%), Query Frame = 1
BLAST of Spo10136.1 vs. UniProtKB/TrEMBL
Match: A0A068V0S1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038452001 PE=3 SV=1) HSP 1 Score: 591.7 bits (1524), Expect = 6.800e-166 Identity = 303/394 (76.90%), Postives = 339/394 (86.04%), Query Frame = 1
BLAST of Spo10136.1 vs. UniProtKB/TrEMBL
Match: F6H312_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05240 PE=3 SV=1) HSP 1 Score: 585.5 bits (1508), Expect = 4.900e-164 Identity = 299/393 (76.08%), Postives = 339/393 (86.26%), Query Frame = 1
BLAST of Spo10136.1 vs. UniProtKB/TrEMBL
Match: A5AV90_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005135 PE=3 SV=1) HSP 1 Score: 585.1 bits (1507), Expect = 6.400e-164 Identity = 299/393 (76.08%), Postives = 338/393 (86.01%), Query Frame = 1
BLAST of Spo10136.1 vs. ExPASy Swiss-Prot
Match: BRT1_ARATH (Adenine nucleotide transporter BT1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 4.900e-141 Identity = 261/390 (66.92%), Postives = 309/390 (79.23%), Query Frame = 1
BLAST of Spo10136.1 vs. ExPASy Swiss-Prot
Match: BT1_MAIZE (Adenine nucleotide transporter BT1, chloroplastic/amyloplastic/mitochondrial OS=Zea mays GN=BT1 PE=1 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.400e-102 Identity = 190/287 (66.20%), Postives = 231/287 (80.49%), Query Frame = 1
BLAST of Spo10136.1 vs. ExPASy Swiss-Prot
Match: BRTL1_ARATH (Probable mitochondrial adenine nucleotide transporter BTL1 OS=Arabidopsis thaliana GN=At3g20240 PE=2 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.200e-59 Identity = 117/291 (40.21%), Postives = 187/291 (64.26%), Query Frame = 1
BLAST of Spo10136.1 vs. ExPASy Swiss-Prot
Match: S2542_XENLA (Mitochondrial coenzyme A transporter SLC25A42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.500e-49 Identity = 107/280 (38.21%), Postives = 173/280 (61.79%), Query Frame = 1
BLAST of Spo10136.1 vs. ExPASy Swiss-Prot
Match: S2542_DANRE (Mitochondrial coenzyme A transporter SLC25A42 OS=Danio rerio GN=slc25a42 PE=2 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.300e-49 Identity = 109/280 (38.93%), Postives = 172/280 (61.43%), Query Frame = 1
BLAST of Spo10136.1 vs. TAIR (Arabidopsis)
Match: AT4G32400.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 502.3 bits (1292), Expect = 2.700e-142 Identity = 261/390 (66.92%), Postives = 309/390 (79.23%), Query Frame = 1
BLAST of Spo10136.1 vs. TAIR (Arabidopsis)
Match: AT3G20240.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 231.9 bits (590), Expect = 6.900e-61 Identity = 117/291 (40.21%), Postives = 187/291 (64.26%), Query Frame = 1
BLAST of Spo10136.1 vs. TAIR (Arabidopsis)
Match: AT5G01500.1 (thylakoid ATP/ADP carrier) HSP 1 Score: 176.0 bits (445), Expect = 4.500e-44 Identity = 99/284 (34.86%), Postives = 162/284 (57.04%), Query Frame = 1
BLAST of Spo10136.1 vs. TAIR (Arabidopsis)
Match: AT3G51870.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 171.8 bits (434), Expect = 8.500e-43 Identity = 96/284 (33.80%), Postives = 166/284 (58.45%), Query Frame = 1
BLAST of Spo10136.1 vs. TAIR (Arabidopsis)
Match: AT5G51050.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 169.1 bits (427), Expect = 5.500e-42 Identity = 103/279 (36.92%), Postives = 153/279 (54.84%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10136.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo10136.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo10136.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo10136.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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