Spo10214 (gene) | SpinachBase

Overview


Name	Spo10214
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr5 : 34597313 .. 34599010 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGTGTCACTTGTCAAAGGAGAAGAGTTACGTTCTGCAACAGCTCAAACTGAAGATGATCGTGATACAGAAAAGAACAATCAAGGATCGGATAACTTTGAATATCAATATGATGTGAAACTAAAAACTGGGATGCAGACCACTGATTTAGGCAATAATCACGAGAGGGAGAAGAAGAAAAACGGTGCACATATCCTTAATTTAAGTGATGATGAGAGAGTGAAGAAGAGAGTCAGAAGATATGCACCTGTAGAAACAGAACAAAATGAATGGTATTGTATGGGTGCACTTGGAGACATCAGGGGACCCTATAAAATGTCAATGCTCAAGCAATAGAATGAATTAGCTGCTCCATTTGCTAACAAGTTCAAAGTTTGGAAGATAGGCCAGTGTGAAAAAGATAGAGTGCCGTTGCCAGATGCTTGTCGCTTAGTCTCCACAAGTAAGTAATCGTATCTTTCCAATCTGTACAGAGAAAGTAGATAATTGTTCTTGCTGGCTTAACTACTTGATGCAAGTTTTTGCTCTAACTCTAATTTTTTGACCATTCAAAAGTCAGAACATTACAACGTAGGTAAGAAGAAGTCGCCATTCCTTTAAATACCTAATTTATCTAATGAGCTTACTACTCACATAAGGTTATTTTGGATTCTCCTATTTCTTCCGAGATTGTGACTTGTGTGTTCCTTTAGTTACTTTCCTGCGATCAAGTCATGTAAAATCTCTTCAATCAAGTGAAAACAGGTCTAGAGATCCCAAATGAAGTCTCTGTGGTGGCTTTGAGGAAGCCTTCCACCATATACATGAGATTTCTCAAAAGCGAAGGGGCATATCTGTACTTGTTGGCATATCTGTACCTGTTAGCATATCTGTACCTATTAGCATATCTGTACCTGTTGGCATAGTTGTACCTGTTGGCATACCAGCCTATTACTACTCTTTTACACAAGTAGTGCCTGTTGGAAGACCTATTTTCTTTCTTTCTTAAAGTAGAAGAAGTTAGCACTAGCCTGCTTTCTTTCTTTCTTCAAGCAAAGTAGTTAGCACTAGCCTGATTTCTTTCTTTCTTCAAGCAGTTAGCACTAGCCTGCTTTCTCTCTTTCTTCAAGCACAAGAAGTTCGCACTAGCCCTTCTTTCAGAAGCAGAAGCAATTGGCAGAATATGGAGTACATGTATCAAATAGTTTTACTTGGATTACAAAGTATTAGAAATATGGAAGAGGTATGTGTATGTGTATTTTTGTTATTATAGATTTATCTCATTTTTTACTATATATGCGCTATGTTTTATCCAAACTTTACTAATTAATACATTATTTTGTTGATGTACAGATATTTTCTCCAAACCCGTACACTCAAGAGAAGATCGATGATGTTCGAGAAAAATGGCGTAGATACTTTATTAGTAGTTGTTTGTAGTCATTTTCTAGTTTTCAGAGATAAAAATTAAACTATAACAAATTGTAGGTTATTTTTTGGAATACAATTATTTATACTTGTTGAACCAACTTTCTTGTTTGAATTAATACAAATATATTTTCGCAATTCTACAAATCTCAGCTCTATTTATTATTTTTGTGAATTTATTATTTATTTTATTACGTACGTAGAAATAATTTAAATTAGCAAGAACAAAAATAAAAAAAAAATTTAAAACATAACACACACTTTAGGCGTCGCCTCCTATAATTAC

mRNA sequence

ATGGCATCGTATGATCGTGATACAGAAAAGAACAATCAAGGATCGGATAACTTTGAATATCAATATGATGTGAAACTAAAAACTGGGATGCAGACCACTGATTTAGGCAATAATCACGAGAGGGAGAAGAAGAAAAACGGTGCACATATCCTTAATTTAAGTGATGATGAGAGAGTGAAGAAGAGAGTCAGAAGATATGCACCTGTAGAAACAGAACAAAATGAATGGTATTGTATGGGTGCACTTGGAGACATCAGGGGACCCTATAAAATAGTGCCGTTGCCAGATGCTTGTCGCTTAGTCTCCACAATTAGCACTAGCCTGCTTTCTCTCTTTCTTCAAGCACAAGAAGTTCGCACTAGCCCTTCTTTCAGAAGCAGAAGCAATTGGCAGAATATGGAGTACATGTATCAAATAGTTTTACTTGGATTACAAAGTATTAGAAATATGGAAGAGATATTTTCTCCAAACCCGTACACTCAAGAGAAGATCGATGATGTTCGAGAAAAATGGCGTAGATACTTTATTAGTAGTTGTTTGTAGTCATTTTCTAGTTTTCAGAGATAAAAATTAAACTATAACAAATTGTAGGTTATTTTTTGGAATACAATTATTTATACTTGTTGAACCAACTTTCTTGTTTGAATTAATACAAATATATTTTCGCAATTCTACAAATCTCAGCTCTATTTATTATTTTTGTGAATTTATTATTTATTTTATTACGTACGTAGAAATAATTTAAATTAGCAAGAACAAAAATAAAAAAAAAATTTAAAACATAACACACACTTTAGGCGTCGCCTCCTATAATTAC

Coding sequence (CDS)

ATGGCATCGTATGATCGTGATACAGAAAAGAACAATCAAGGATCGGATAACTTTGAATATCAATATGATGTGAAACTAAAAACTGGGATGCAGACCACTGATTTAGGCAATAATCACGAGAGGGAGAAGAAGAAAAACGGTGCACATATCCTTAATTTAAGTGATGATGAGAGAGTGAAGAAGAGAGTCAGAAGATATGCACCTGTAGAAACAGAACAAAATGAATGGTATTGTATGGGTGCACTTGGAGACATCAGGGGACCCTATAAAATAGTGCCGTTGCCAGATGCTTGTCGCTTAGTCTCCACAATTAGCACTAGCCTGCTTTCTCTCTTTCTTCAAGCACAAGAAGTTCGCACTAGCCCTTCTTTCAGAAGCAGAAGCAATTGGCAGAATATGGAGTACATGTATCAAATAGTTTTACTTGGATTACAAAGTATTAGAAATATGGAAGAGATATTTTCTCCAAACCCGTACACTCAAGAGAAGATCGATGATGTTCGAGAAAAATGGCGTAGATACTTTATTAGTAGTTGTTTGTAG

Protein sequence

MASYDRDTEKNNQGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKKNGAHILNLSDDERVKKRVRRYAPVETEQNEWYCMGALGDIRGPYKIVPLPDACRLVSTISTSLLSLFLQAQEVRTSPSFRSRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKIDDVREKWRRYFISSCL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo10214.1	Spo10214.1	mRNA

Homology

[Close]

BLAST of Spo10214.1 vs. NCBI nr
Match: gi|902233884|gb|KNA23237.1| (hypothetical protein SOVF_025930, partial [Spinacia oleracea])

HSP 1 Score: 167.9 bits (424), Expect = 1.600e-38
Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 1

		  
Query: 5   DRDTEKNNQGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKKNGAHILNLSDDERVKKRVR 64
           DRDTEK +QGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKK GAHILNLSDDERVKKR+R
Sbjct: 26  DRDTEKESQGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKKIGAHILNLSDDERVKKRIR 85

Query: 65  RYAPVETEQNEWYCMGALGDIRGPYKI 92
           RYA VETEQNEWYCMG LGDIRGPYK+
Sbjct: 86  RYASVETEQNEWYCMGPLGDIRGPYKM 112

[Close]

BLAST of Spo10214.1 vs. NCBI nr
Match: gi|902150993|gb|KNA05474.1| (hypothetical protein SOVF_190000, partial [Spinacia oleracea])

HSP 1 Score: 156.0 bits (393), Expect = 6.200e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

		  
Query: 105 STSLLSLFLQAQEVRTSPSFRSRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKI 164
           STSLLSLFLQAQEVRTSPSFRSRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKI
Sbjct: 1   STSLLSLFLQAQEVRTSPSFRSRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKI 60

Query: 165 DDVREKWRRYFISSCL 181
           DDVREKWRRYFISSCL
Sbjct: 61  DDVREKWRRYFISSCL 76

[Close]

BLAST of Spo10214.1 vs. NCBI nr
Match: gi|902185526|gb|KNA10512.1| (hypothetical protein SOVF_143830, partial [Spinacia oleracea])

HSP 1 Score: 156.0 bits (393), Expect = 6.200e-35
Identity = 81/128 (63.28%), Postives = 90/128 (70.31%), Query Frame = 1

		  
Query: 5   DRDTEKNNQGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKKNGAHILNLSDDERVKKRVR 64
           D DTEK NQGS +FEYQ DVKLKTGMQTTDLG++HEREKKK G HI++LSD+ERVKK +R
Sbjct: 183 DPDTEKENQGSGHFEYQNDVKLKTGMQTTDLGDDHEREKKKIGVHIIDLSDNERVKKTMR 242

Query: 65  RYAPVETEQNEWYCMGALGDIRGPYKI-----------------------------VPLP 104
           RYAP ETEQNEWYCMG LGD+RGPYK+                             VPLP
Sbjct: 243 RYAPAETEQNEWYCMGPLGDVRGPYKMSMLKQWNELAAPFANKFKVWKIGQCEKDRVPLP 302

[Close]

BLAST of Spo10214.1 vs. NCBI nr
Match: gi|902228689|gb|KNA21218.1| (hypothetical protein SOVF_045340 isoform B [Spinacia oleracea])

HSP 1 Score: 82.0 bits (201), Expect = 1.100e-12
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 1

		  
Query: 126 SRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKIDDVREKWRRYF 176
           S   +  M+YMYQIVLLGLQSI N+EEIFSPNPYTQE+I+DVREKW RYF
Sbjct: 116 SECGYYVMKYMYQIVLLGLQSISNVEEIFSPNPYTQEEINDVREKWSRYF 165

[Close]

BLAST of Spo10214.1 vs. NCBI nr
Match: gi|902228688|gb|KNA21217.1| (hypothetical protein SOVF_045340 isoform A [Spinacia oleracea])

HSP 1 Score: 76.3 bits (186), Expect = 6.300e-11
Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 1

		  
Query: 126 SRSNWQNMEYMYQIVLLGLQSIRNMEE----IFSPNPYTQEKIDDVREKWRRYF 176
           S   +  M+YMYQIVLLGLQSI N+EE    IFSPNPYTQE+I+DVREKW RYF
Sbjct: 116 SECGYYVMKYMYQIVLLGLQSISNVEEVRVHIFSPNPYTQEEINDVREKWSRYF 169

[Close]

BLAST of Spo10214.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWL9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_025930 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.100e-38
Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 1

		  
Query: 5   DRDTEKNNQGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKKNGAHILNLSDDERVKKRVR 64
           DRDTEK +QGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKK GAHILNLSDDERVKKR+R
Sbjct: 26  DRDTEKESQGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKKIGAHILNLSDDERVKKRIR 85

Query: 65  RYAPVETEQNEWYCMGALGDIRGPYKI 92
           RYA VETEQNEWYCMG LGDIRGPYK+
Sbjct: 86  RYASVETEQNEWYCMGPLGDIRGPYKM 112

[Close]

BLAST of Spo10214.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDX8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_190000 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.300e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

		  
Query: 105 STSLLSLFLQAQEVRTSPSFRSRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKI 164
           STSLLSLFLQAQEVRTSPSFRSRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKI
Sbjct: 1   STSLLSLFLQAQEVRTSPSFRSRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKI 60

Query: 165 DDVREKWRRYFISSCL 181
           DDVREKWRRYFISSCL
Sbjct: 61  DDVREKWRRYFISSCL 76

[Close]

BLAST of Spo10214.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QT92_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_143830 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.300e-35
Identity = 81/128 (63.28%), Postives = 90/128 (70.31%), Query Frame = 1

		  
Query: 5   DRDTEKNNQGSDNFEYQYDVKLKTGMQTTDLGNNHEREKKKNGAHILNLSDDERVKKRVR 64
           D DTEK NQGS +FEYQ DVKLKTGMQTTDLG++HEREKKK G HI++LSD+ERVKK +R
Sbjct: 183 DPDTEKENQGSGHFEYQNDVKLKTGMQTTDLGDDHEREKKKIGVHIIDLSDNERVKKTMR 242

Query: 65  RYAPVETEQNEWYCMGALGDIRGPYKI-----------------------------VPLP 104
           RYAP ETEQNEWYCMG LGD+RGPYK+                             VPLP
Sbjct: 243 RYAPAETEQNEWYCMGPLGDVRGPYKMSMLKQWNELAAPFANKFKVWKIGQCEKDRVPLP 302

[Close]

BLAST of Spo10214.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RP18_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045340 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.000e-13
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 1

		  
Query: 126 SRSNWQNMEYMYQIVLLGLQSIRNMEEIFSPNPYTQEKIDDVREKWRRYF 176
           S   +  M+YMYQIVLLGLQSI N+EEIFSPNPYTQE+I+DVREKW RYF
Sbjct: 116 SECGYYVMKYMYQIVLLGLQSISNVEEIFSPNPYTQEEINDVREKWSRYF 165

[Close]

BLAST of Spo10214.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQW3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045340 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.400e-11
Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 1

		  
Query: 126 SRSNWQNMEYMYQIVLLGLQSIRNMEE----IFSPNPYTQEKIDDVREKWRRYF 176
           S   +  M+YMYQIVLLGLQSI N+EE    IFSPNPYTQE+I+DVREKW RYF
Sbjct: 116 SECGYYVMKYMYQIVLLGLQSISNVEEVRVHIFSPNPYTQEEINDVREKWSRYF 169

The following BLAST results are available for this feature:

BLAST of Spo10214.1 vs. NCBI nr
BLAST of Spo10214.1 vs. UniProtKB/TrEMBL
BLAST of Spo10214.1 vs. ExPASy Swiss-Prot
BLAST of Spo10214.1 vs. TAIR (Arabidopsis)

BLAST of Spo10214.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902233884\|gb\|KNA23237.1\|	1.6e-38	91.9	hypothetical protein SOVF_0259...	[more]
gi\|902150993\|gb\|KNA05474.1\|	6.2e-35	100.	hypothetical protein SOVF_1900...	[more]
gi\|902185526\|gb\|KNA10512.1\|	6.2e-35	63.2	hypothetical protein SOVF_1438...	[more]
gi\|902228689\|gb\|KNA21218.1\|	1.1e-12	76.0	hypothetical protein SOVF_0453...	[more]
gi\|902228688\|gb\|KNA21217.1\|	6.3e-11	70.3	hypothetical protein SOVF_0453...	[more]

BLAST of Spo10214.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RWL9_SPIOL	1.1e-38	91.9	Uncharacterized protein (Fragm...	[more]
A0A0K9QDX8_SPIOL	4.3e-35	100.	Uncharacterized protein (Fragm...	[more]
A0A0K9QT92_SPIOL	4.3e-35	63.2	Uncharacterized protein (Fragm...	[more]
A0A0K9RP18_SPIOL	8.0e-13	76.0	Uncharacterized protein OS=Spi...	[more]
A0A0K9RQW3_SPIOL	4.4e-11	70.3	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo10214.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo10214.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004722	protein serine/threonine phosphatase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15089	0.71	Barchart \| Table
Spo07488	0.70	Barchart \| Table
Spo23771	0.70	Barchart \| Table
Spo17225	0.70	Barchart \| Table
Spo11673	0.69	Barchart \| Table
Spo21422	0.69	Barchart \| Table
Spo02230	0.68	Barchart \| Table
Spo06241	0.68	Barchart \| Table
Spo06825	0.68	Barchart \| Table
Spo08150	0.68	Barchart \| Table
Spo18116	0.68	Barchart \| Table
Spo20788	0.68	Barchart \| Table
Spo26995	0.68	Barchart \| Table
Spo14240	0.67	Barchart \| Table
Spo15404	0.67	Barchart \| Table
Spo15705	0.67	Barchart \| Table
Spo15874	0.67	Barchart \| Table
Spo18637	0.67	Barchart \| Table
Spo19609	0.67	Barchart \| Table
Spo20045	0.67	Barchart \| Table
Spo20858	0.67	Barchart \| Table
Spo15947	0.66	Barchart \| Table
Spo17779	0.66	Barchart \| Table
Spo23611	0.66	Barchart \| Table
Spo22929	0.66	Barchart \| Table
Spo10215	0.66	Barchart \| Table
Spo14099	0.66	Barchart \| Table
Spo08541	0.66	Barchart \| Table
Spo15410	0.66	Barchart \| Table
Spo07035	0.66	Barchart \| Table
Spo21732	0.65	Barchart \| Table
Spo02818	0.65	Barchart \| Table
Spo02749	0.65	Barchart \| Table
Spo15842	0.65	Barchart \| Table
Spo14319	0.65	Barchart \| Table