Spo10248 (gene)

Overview
NameSpo10248
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGamma-secretase subunit Aph-1, putative
Locationchr3 : 15830311 .. 15839609 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTGTTGACTGTACATTCTCCCCAAAGCATCACCTTCTTCATCTGGGGGGATAGAGAGAGAAAGTAAGAAAGAGAAAGAAGGAGATGACGGTAGCAGCAGGCATTGGGTACGCATTAATAGCATTAGGCCCTTCATTATCACTCTTCATCTCTGTCATCGCCAAAAAACCCTTCTTGATCCTCACTGTTCTCTCCAGGTAAATTTTCACCATTTTTGGTACTTTTGGGCACTTTTCTTTTACACTGCATTTGAGCTCATATTATACGAAATTGAATCCAGAAAATGAATTTGGTAGTTGTCAATTTTATTGGGTATTTTTCAGATTCTTAATTACCCCTAATTTTGTTATTATTGATTGTAATGTCAATTGTATGTGTTATATAGAGGGTTTTCCAATAGAAGAGACTATTCTGTCTTCTTGGTTGTTGTGGTTCCTTAGTTTTCTGTTGCATTGTTGCATTTTTCATCCAGAAGGGTTGTGATTTGTTTGGGTGAAGTTCTTCTTTGTACTGGGTTGTGGTGGTTAGTATTTTACCCCATTTCGGTAGGCCTTAGGGTTTATGTGCTATTTTTCCATGTCTATGAAGTCGATAGTCTATACAGGGAGAAGTGATCTCAATTAGTATAAATTCAAAAAAAACGAAATAAAAAAGCTCAATCTGGCAAACTACCTGAAATATCCTTTTGGGATGAAATGCAATGACTTTGAGACAGTAAGAGTGTAAGAACGAGATGCGAGTACGATGAAACTTATGCTCGATTCTTGACTGCTTGCTGTGAGGTTTTTTTTACCGGATTAAATGGCTAGAGAGGATTTTGTTTGTTCTAGAACGGATCTTATAAGTTATAGCCTTAGCTATTTCTTATGTACACATGACGGAGGATGTATAATTTGTTTGGCTACTGTCTTTTTCGTTGTTATGTTAAGGGCTTTCTTATTTTCCATGTCCTGTTTCGTATTTCTAATTCTTCAAACTTATCATCTACTATTTGTTGGCTAGAGCTAGGATATTACGAACAATCCTAATCTGTTGTAATTGTTCATTGAACTTGATTAAACAGACATTGAGCATGGTCTTGAAATAGTCCTTAGTTTCCCTGCACATTAAGTCACATTGTCCTGTTCAACATAAATTTCAATTAAAACGATTTCACCAAACTTCTGTCTTACTACCAGTTGCTATATTGATTTTCTTCCTACTCACTCAAATATGTTGGGGTATGCTAGGTAATTCAATCATGATCCACTACTCCATACTTCTTTAGGAAAGCAATTTTTTTGTGGATGTCAGGGCATCTAAAAAACAATATATCTAACTATTCTTTCTGCATTTCCTCGAAAGAAAAACAAAAAAGAAATCTACTAATGAATATCCTTAAGGTATTTTGTACTGGAAGTGTGGACCATATGATTTGGATACTTTGTTTTGCCCAATTGACCTCATGTTTAAAAAATTAAAACAAAATATTTTTGCAGCTTTCAATTATTTTACTTCTTCTGTCGCTTATTTTTTTAAAAGCGGGTTTGGCTCGGATATTAAGACTAGCAATAAAGTAGAATAAAATAATTGGATGTCGATAGTGAGAGAGAAAATATAGGAAGTGTTACGGTGGAGAGAGAAGAGTTGAACCCATCTTGATGGTGTTGTTTTTGACACGACCCAAAAAAAAAGCATGAAGAGTATTTTGGGACTACAGGAAAGGAAAAATGGAAGGAGTAAGATGTAAGGGATGAGAGCACATTTATCCAACTTGTGTTAAAAGATGGGTTTTTTTCTTCTAATGTGGTGTTCTGTAAAGATAGTTTGCTTCACTGGTTGAATTTTTCTCCATTATAAAGATTTAATACCAATTCACGATCCCTAGAGGTTTTGTCTTGGTACAACTGAGAGATATCCGGCTGCCTGAGAATTATGGTTTGTTTATGACCTGAATAAAGGATTAAGTCATTGAGCTCTTCATTTCCTTTGGGCATAATATCTTTAGCTAAGTGATAAAATTTGATAGTTGGAACAGAAGCATTCAGTCTTTGGAGCATCTTTTTCGGGGGATAAGGATAACAGGAACTCAAACTTATGTGAAAGAAATTTGCTGACTGAGAAATTTTGTGTAGCCTGCCTAAGGCATTATCTGAGGTATTGAATAACCAACTTAGATCCACTTCTGAGTAACCTTTGATGTGAATAGCCGCCTTAGATTCACTTCTTAGTATACTGAAGAGTGAAGATACACATGGACTTTCCGTTCTTATTGCTTAATGCCATTACTCCAATGTTACTCCAATACCATTCCAGAGGTATTGTATAGCCACCTTATTGCTTATCATGTCATCTGTTCAATGTTTATAAAGAGGTTTCTATGGTGGAATATGTGGGGGAGGGTCAGATACATTGCATCATTACCTGTGCAGCGAAGATGTTCTTTTGGCCTTAACCCTACAATTGTAAATAGGTTTTTGCATTAAAGACCCTTAGGCAATCAACTGACTTATTACTTAATAATAGAAAACATTTAGCGACACATTTGCATTATACCATCGTAATCATTTCCTTTCTTTAAAAAGTCATCTGTGATTCTTTGTCCACTTGACTTGATCTTGAGACGTTTTCTCGCTGTACACAATTATTAGCAATTTCAACTTCATTTTGAAAGCTGCAGAGAACTATCCAAACTAACTGAATCTTTCCATATCTGCGAACTGACCCAAAAAAGTAGTTTTTTTCTTCTTCTAATCCTTGTATTTTATCATGGAAAAACTGAAGTCCTTATAGTCAGGATTTCTGACTATTGCTTAGCAACTTTGTACTGCAACTGGAAAATGGGAATTGCTTTATAGAAGTAGTCTAAAAGTTGGTGGATTGAACACTTAGGATTTTAACTAATGCTTGACATAATGTAGGTAGACCCATTTGATGCAACTTTGAGACATTAGCTTTAGTTCTGGACATGCGTTATCTAGATCTTGCTCTATGATGTAGCATAGTGAGAGTTTCTTTCAAGAAGCACTTTGCTAAAGAGTTTCTCTTAAGTAACTTGGACGAGGACTGATCATTTCCATTTTACAACAGCCATAGCCAAGCTACAGGCGTTGGTTTATTTTTAAATCTGGGGATACTCTGTTCTCTTTCTTGAAAACTGAAGTTACTCTAAGCTTTTAAGGAGTTAGATGGGAATTTTGATGCTCTGACCCTATGCAAATGATTCAAGGTAGAGGCCAATCTTATTACCTGATCAGTTTGATTTTGTCATAATTGTACGTGGTAGAGATTGACTCTAGGAGATGCCATGATGGTGAGCTGTATGAAAGAACCTTTCATATTTACCCTTAGGGTCTGAATTCGCTTTTTAGTCCTTGTCTTGCAGTATTACAATCTCCATTGTCCAGACTAGAAGGTTGTTAGGTTATTTTTTGAGTTCTTGTAAGTAGCTGCGTCGTAGTAGTATTTGGGTTCTGAATCTGATAGGGAAGTGAAGATGCCCTCAGTGGCATCAGTTTTTGTCTCACTTGTCGTTTATTTGAATTGCAGTACACTACTATGGCTGGTGAGTTTGATTATACTTTCAGGGCTTTGGAGGGGTTTCCTTCCTTTCAAGTCTACATCATGGTGGCCGTACGGAATTCTTGTCTTTACATCTGTTTGCTTTCAGGAAGGGCTTCGGATTCTTCTGTGGAAAGCTTACCTGTATGTAACTAAGTTGCCTCTAGTTTTAAATTTCCCTGCTAATGGCTACTTTGTTTTTTTAATTTGTTTTTCATTTTTATTATTATGCACTTACTCTGCCCATGTCACTTGTACATTCTTAGGTATCATGACTATCATCACTGTTTCTAAATTTGTTGAGTTATTTATCTCTTTTGCAAGGGTGAGCACCTATACAACATAGTTTCTGTAATCCTTTGATAGCTCTGAAACTTTTGGCCCATCTTCCAATTCTTCATCAATCACAATATTTTTCTATAAGAAAAGTACGTAACAGAAGAAATGAGAAATCCACATAAAAGAATTGAAGGACATAATTGTACTTGAGTAAATGTTTTGCGTTATGAGGTGACAGAAGGATATATTCGGCAATAATGGTAGTGCATTAGTTGCCTTTGGAGTAAGTCATAAATATGTTTTGCAGTTTGGTCGGAACTCAGCAATTTCTATACCTTAGCACAAGCCTTACTGTGAATGTGTAGTCCAATGACACACTAGTTGTACAGAATTAGATGAAAGTATGCTGTAAATTGGAATGAGAGTTTCCTGGTTGCAGTTAGTGTATAAAAAGGCGCGAAAAAGGCGCGCCTAGGCTCTAAGGCGCAAGGCGTTTGGAGCCATCGCCTTTTATTGTCTGGGCGAGGCGATTTTGATGAGGCGCACCTAAGGCGCACCTCCTGAGGAAAACACCATTTTTTTTTACTTTTTATTAGGGCGCCTCACTTCAATGAGGCGCGCCTAAGGCGCTGGGAACTCTAAATCGCCTTGGTGCGCCTTGAGCCTTTTTATACATTGGTTGCAGTGTGTTTGACGCCCTACAAGGGGTAGCTGCTAGTTTTGATGCAGGGATTTGTCTGTCTTATGATGATTTTGTTGCTGGCAGAAGTAATAATCATTGGTCATTTTCTTTCTTCCTGCAATGTATATGATTTGTGTGAATTTCAAAGAGAATGTTTATTCACGCTGTGTCGCTGTCCACTATTTCTCCCCTATAATAAGTAACTATTATCTTTCGAGACTTAAGTCGGTCTCTCTCTCCCTCTCCAAGGATGAGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGATTTTAATATTTCTAAGATAATACAATATCGACGTCATTACCAATTTACCATATGGGCAAGCTATGTCAACCTCGATCAAAGTAGCTAAGATTAGGAACTTTTTTTCTTTATTTAATTGCAGCTTTGCTTTGTGCTGATATTCCATAACATGTTATATAGATGTCAACAAGAGTAAAAGTTACGTTCCAAGGGTGCCTCCTATGCACCAAGTATGTCTTTGCAATTACTCTTATTTTACCTCTAACAGAGTTTAGTGTGTAAACTGTAAAGAATCTAAAGACTATCATCAAATATTTGAGCCTTCCCTTTTTTTGGTTGGTGGGGGAAGATCTGATGAGAGTAATCGACAGTGGGGAGTTTGATGGACCCGAGAGCGCTATACCGATTTCGTTGTTATAATGATAATTGGATATCATGGGATGAACCAAATCATTTTGGCATGAAACTAGTGTTTTTGAATGCTTTCCGCTACTTAAAAATAGTATAATCACATGTGAAGGCTGTGGCATAGGATTGCAAATAAGCTTTTAGTCCAAACAGTTTTGGGTTACTGACTCTTACTGTGTGATGTACTTTGATTTTGTTTCCGTAAACACCTTTGTGAAATATATTTAAGGTAAAGTTATACCTGATACTTATTGTTGTCTTGAAAATTCTTACATATTATCACTCATCTTCTTCCCTGTAACCTTGCACAGGAGGTTGGAGGACATGTTGGATGCATTTGCTGATAGGCTTTCGAAACCTCGCTTGTTTCTGACAGATAAGATGCAAATTGCTCTAGGTAAGCAGGAAATTTTTGTTATATGGATAAATACCCATCAATGCATTTCTATGATAATCCAATATGAACTTTGGGCTTTGATCTCACAAAAATGTTGTATGGATTTTATTCTCTTATGATTTCTTGTATGTTGTCGGTCTCCGTGTTGTACGTGGTCCTTTTGCAGCTGGTTTTTCCTTGTTTTTGACCTCAGAGTTCACGTTATTAGTTGAAAGTCTTGAGACTCCTCTTCCCTCTTTCTGTTATTCTCTAGAACTGTGTACCTATCTATAGGCCGTCAAAATGCGACCCTATCCGAAAACCGACCCGAACACGACCCAAAAATTTTGGGTCTTGAACAAGAATTTGTGACCCGTAACCCATTTTATCCGAACTCGAGCAGCCCGAAAAGTAATGGGTCAAAATCCGACCAAAACCGTTTTTGACCCAACCGATTGAAAATCATTGTATTTATAGTAATAAATGAGATTATGAGGAATTTTAAGCATAATAAACACGCTGATGTTACTATTGTTGGGTGTAATATGATTTTAATTTGAATTATACGCCATTTAATGGTTGAATTTGACTAAATATAAACTTGTGTAGGAAAATTTGTTAATTTGTGCCCGTATTTTGTATATTTATTACCTAAATTAATGAAAATGTAATACGTGTTTTAAAATCTCTAAACCCGAACCTGAAAGTGATCGATCCGAATTAACCAGAACTCGAAAATAATTTTTTACAAACCGACCCGGCCGACCTGTTTGACAGGTCTACCTATCTACCTGTGAGAGGAGAGGGGGAATTTGTTGTGTTCTTGAACTTTAACTGTTGCAGACCTTGCCTTAGGAATCACTGGTTCTGTGAAGGGAATCTGACTTATGGCTGTCAGAATTGAGGAGACTGTCTTGGGGATGTTGAACAATAGAACCTAGATATTTCACCTGCTGAGTTTTGGAGAAGAAGCCAGTCTATTTCTGATGATCTCGGTTCGTATCTTCTCTGTGGACTCGTGGAGACTTAAGTGCATTCTATAATCCTGCTAAATTATGCTAATTGTCGACAACTGATGGTGGAAAAACTTATTCTCTGGTAGCCAGATAAATGTTTTGATTGATTTTATTTTGTGCCATTGGTGGTTTCTGGCTTTTGTTCCTTGAGATGCTAAAATAAGTGCATTATGGAGATACATCTTGCTGTTTCTATGTATAGACGTCAATTATTCCTTTCCCTCCTGGCAATGGTTCCTTTTTATATATAAATATGATGCAGTCGTCCTTTTTTTTTGTTGTTGAACAGACTATCCTCTCTAATCCGGTTCATCTGTTTTTTCTCAAATCAATTGCAAGCAGCTGGTGGCTTAGGTCATGGTGTGGCTCATGCTGTTTTTTTCTGCCTTAGCCTCTTGACACCTTCATTTGGACCAGCAACTTATTATGCTGATAGATGCACGTGGATGCCTTTCTTTCTTATTTCTGGTGAGTCGGAACTTAATAGATTTCCTTTCAGTTTGTAGATACACCTACTTATGCGTGGAACCTGCTGAAGGCTCTCTAATTATCTCTTTTTGGTGGTTTTGGAAACTGGAAATCACCTGGGGGGTCGGACTTTCCTGTGGATGACCTATAAGACAGTGGTTCTCTCAATATTTAGAAATTAGAAAATGCCTGCAGCTTTCCCCCCTGCCTAAAGAAAACAGAAAAAAGAAAAATTTATCCAACATTTTCAGGTTCGAAGGTTAAACTCACAGATTCAATAAAAAAATCTACTCGTACTTGTATTTTTTTAGTTTAATTTTACTTTGCTTGATGGTGGTAGGGCAGTGTAAAACTTTGAATACTTTGCTATTAGGAAATTCAAGCTCGGAAATACTACTTTTGTCTGTAATGCATCTAAAGAAAATTTTGGATGAAAATCATGATCGTTTTTCCCTGAAATCATATTTCAAGTACTTCTAATATTCTTTTATGACTGATACTTTTTGACTTGGAAAAATACCTTTCTATTCAGTCAAACATCAATATATCTCACCCTGCAACTCCTTATTTCATTCAAGTAAGGGTGTTTATTTGTGTGTCTGTACTGTTGGAATAGGGATAAGTAGCTAACTAGCTATGAGGTGTTAACTTCACATTTGTTTATTTACTTTGGCTATCATCTGAAACACCCATGTGTGTGGTTGGCAGGTTATTGCTTTGGTTGATATATACAATTCCTGATATTTTTCTAAAGGTGAAACTTTTTGCTTTGTACATGGCAGCAATTATTGCTCTAGCATTTGTTACAATTCATACCTTCTCAATGGTCATTGCCTTCAATGGATATGCTGAATCGAAGAGAGTTGATCAGTATTTTGTTCCCGTAGTTCATCTGATTGCCGGAATGCTGGTATACATGCATCCCTCTTCTAAACTTTCAGCATACACTTTTATTTATAGAGATATGACGAATAAAGTGTGCATTTTTCTGCATGACATCTACGTTATTATGCCAATCAGCAAAATATGATCATTTTTCTGTTTTTGAATTTTGAGATCTCCATTATGACTGTTCATTGTAAGCTCTATGCTATGCTAGTTGTTGAGGAGATTACTTGTTATGGGATCCAAAACGTTTGGTCATGGGTTCATCTAATCAGAACGAGTAGAGTTGACGGAGATTAGAGAGAAGGTAAAAGGAGGGGAGTATATTACCTTCATTATGAGGTAGGAATGATGGATATATCTCAGAGAAATCCACTCTCTAGGATACTTAAGAAAATTCATGTCAAAATTCAAATAAAATTAGTTTTTAATATATATACGAAGTATTTATCAAAGCGCCTTTGACTCGCTGAGATGTCTATACTTCTTTCAATTTGACTGAAGGTTTAGACTGTTGACTTTTTTTGGTGTGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGTGCTTGATGAAGAAAATTCCAAGTACATTTGATTGTATCTCAGACTCAGGTGGAGGCACCATTTGATCTTTGAAGTAATAACCATAGACACATATAGGTGCAACTTTCTATTGAGTGCTGTGAATCTGTGATTAATGTCTTCCTCAAAATTAGATTTTATCGTGTTTCAGTTTATTGTGTTTCATTGCAAATTATCTGTTGACATGAACAAAAAACTTGCTGTTTTTTTTTTGCAGACGCTCATTAATTTTGCTCCTGGAGGGTGCATGATTTCCATTCCCTTGCTATATTTTATGGCTGCATTGACACTGATTCATTGTGGGAAGATGGCGTGGCGAAGAATGGTTGATGAACAGCGTAGAGGGATTACTTTGCAGTAGCTGTACGTTGTCTTTCGTGCAAATTCATCTGGTATTACTTTGCCAGTCCCACAATGCTCCTTAATTAAACCATACTCTTCGAGTCCCACTACAGAATCTTCTTCCAATGAATTAGCGAATCTGTATCTTTATACATTGTTCCTCTATTGAGCAACTCGATCTCCAGTTGTTGGCGGGTTAAACGGTCAGATGTTTTAAGGTTCAGGTAGAAGGCTGCTAAATGGGTGCAGTTTATAATAGTAATTTACCTCAGGATGTATACTTTTAACAATTACAGTCAACATGTAAATTTCACAATTAGACGACTAATTTGGTAACATATGTTTCTTACTAATAATACCATGTAAATGTTGTTGTAAACTCCAAATCTTTTAACATGCTCCTATTTTTTGGTTCTCGTATGCAATTTCTTGCGGAGGACTAATTTAGTT

mRNA sequence

ATTTTTTGTTGACTGTACATTCTCCCCAAAGCATCACCTTCTTCATCTGGGGGGATAGAGAGAGAAAGTAAGAAAGAGAAAGAAGGAGATGACGGTAGCAGCAGGCATTGGGTACGCATTAATAGCATTAGGCCCTTCATTATCACTCTTCATCTCTGTCATCGCCAAAAAACCCTTCTTGATCCTCACTGTTCTCTCCAGTACACTACTATGGCTGGTGAGTTTGATTATACTTTCAGGGCTTTGGAGGGGTTTCCTTCCTTTCAAGTCTACATCATGGTGGCCGTACGGAATTCTTGTCTTTACATCTGTTTGCTTTCAGGAAGGGCTTCGGATTCTTCTGTGGAAAGCTTACCTGAGGTTGGAGGACATGTTGGATGCATTTGCTGATAGGCTTTCGAAACCTCGCTTGTTTCTGACAGATAAGATGCAAATTGCTCTAGCTGGTGGCTTAGGTCATGGTGTGGCTCATGCTGTTTTTTTCTGCCTTAGCCTCTTGACACCTTCATTTGGACCAGCAACTTATTATGCTGATAGATGCACGTGGATGCCTTTCTTTCTTATTTCTGCAATTATTGCTCTAGCATTTGTTACAATTCATACCTTCTCAATGGTCATTGCCTTCAATGGATATGCTGAATCGAAGAGAGTTGATCAGTATTTTGTTCCCGTAGTTCATCTGATTGCCGGAATGCTGACGCTCATTAATTTTGCTCCTGGAGGGTGCATGATTTCCATTCCCTTGCTATATTTTATGGCTGCATTGACACTGATTCATTGTGGGAAGATGGCGTGGCGAAGAATGGTTGATGAACAGCGTAGAGGGATTACTTTGCAGTAGCTGTACGTTGTCTTTCGTGCAAATTCATCTGGTATTACTTTGCCAGTCCCACAATGCTCCTTAATTAAACCATACTCTTCGAGTCCCACTACAGAATCTTCTTCCAATGAATTAGCGAATCTGTATCTTTATACATTGTTCCTCTATTGAGCAACTCGATCTCCAGTTGTTGGCGGGTTAAACGGTCAGATGTTTTAAGGTTCAGGTAGAAGGCTGCTAAATGGGTGCAGTTTATAATAGTAATTTACCTCAGGATGTATACTTTTAACAATTACAGTCAACATGTAAATTTCACAATTAGACGACTAATTTGGTAACATATGTTTCTTACTAATAATACCATGTAAATGTTGTTGTAAACTCCAAATCTTTTAACATGCTCCTATTTTTTGGTTCTCGTATGCAATTTCTTGCGGAGGACTAATTTAGTT

Coding sequence (CDS)

ATGACGGTAGCAGCAGGCATTGGGTACGCATTAATAGCATTAGGCCCTTCATTATCACTCTTCATCTCTGTCATCGCCAAAAAACCCTTCTTGATCCTCACTGTTCTCTCCAGTACACTACTATGGCTGGTGAGTTTGATTATACTTTCAGGGCTTTGGAGGGGTTTCCTTCCTTTCAAGTCTACATCATGGTGGCCGTACGGAATTCTTGTCTTTACATCTGTTTGCTTTCAGGAAGGGCTTCGGATTCTTCTGTGGAAAGCTTACCTGAGGTTGGAGGACATGTTGGATGCATTTGCTGATAGGCTTTCGAAACCTCGCTTGTTTCTGACAGATAAGATGCAAATTGCTCTAGCTGGTGGCTTAGGTCATGGTGTGGCTCATGCTGTTTTTTTCTGCCTTAGCCTCTTGACACCTTCATTTGGACCAGCAACTTATTATGCTGATAGATGCACGTGGATGCCTTTCTTTCTTATTTCTGCAATTATTGCTCTAGCATTTGTTACAATTCATACCTTCTCAATGGTCATTGCCTTCAATGGATATGCTGAATCGAAGAGAGTTGATCAGTATTTTGTTCCCGTAGTTCATCTGATTGCCGGAATGCTGACGCTCATTAATTTTGCTCCTGGAGGGTGCATGATTTCCATTCCCTTGCTATATTTTATGGCTGCATTGACACTGATTCATTGTGGGAAGATGGCGTGGCGAAGAATGGTTGATGAACAGCGTAGAGGGATTACTTTGCAGTAG

Protein sequence

MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFKSTSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFNGYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMVDEQRRGITLQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10248.1Spo10248.1mRNA


Homology
[Close]
BLAST of Spo10248.1 vs. NCBI nr
Match: gi|902157617|gb|KNA06140.1| (hypothetical protein SOVF_183830 [Spinacia oleracea])

HSP 1 Score: 491.9 bits (1265), Expect = 6.700e-136
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK
Sbjct: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG
Sbjct: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV
Sbjct: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240

Query: 241 DEQRRGITLQ 251
           DEQRRGITLQ
Sbjct: 241 DEQRRGITLQ 250
[Close]
BLAST of Spo10248.1 vs. NCBI nr
Match: gi|731322328|ref|XP_010671828.1| (PREDICTED: gamma-secretase subunit APH1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 466.1 bits (1198), Expect = 3.900e-128
Identity = 232/250 (92.80%), Postives = 244/250 (97.60%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAG+GYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK
Sbjct: 1   MTVAAGVGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           ST+WWPY ILVFTSVCFQEGLRILLWKAY RLE MLDAFADRLSKPRLF+TDKMQIALAG
Sbjct: 61  STAWWPYAILVFTSVCFQEGLRILLWKAYKRLEGMLDAFADRLSKPRLFMTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHG+AHAVFFCLSLLTP+FGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGLAHAVFFCLSLLTPAFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAESKR+DQYFVP +HLIAGMLTLINFAPGGC+ISIPLLYF+AALTL+HCGKM WRR+V
Sbjct: 181 GYAESKRLDQYFVPTIHLIAGMLTLINFAPGGCIISIPLLYFVAALTLMHCGKMVWRRLV 240

Query: 241 DEQRRGITLQ 251
           DE+R GITLQ
Sbjct: 241 DERRTGITLQ 250
[Close]
BLAST of Spo10248.1 vs. NCBI nr
Match: gi|694372756|ref|XP_009363655.1| (PREDICTED: gamma-secretase subunit APH1-like [Pyrus x bretschneideri])

HSP 1 Score: 406.8 bits (1044), Expect = 2.800e-110
Identity = 194/245 (79.18%), Postives = 226/245 (92.24%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+AAGIGYAL+ALGPSLSLF+SVI+KKPFL+LTVLSSTLLWL+SLI+LSGLWR FLP K
Sbjct: 1   MTIAAGIGYALLALGPSLSLFVSVISKKPFLVLTVLSSTLLWLISLIVLSGLWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           S++WWPYGIL+FTSV FQEGLR+L WK Y +LED LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  SSAWWPYGILIFTSVVFQEGLRVLFWKVYKKLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++ DRC+ +PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDRCSKIPFFLLSALIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVPVVHL+AGM+TL+NFA GGC+I IPLL+F+A LTL+HCGKM WRR+ 
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGMVTLVNFASGGCIIGIPLLFFIAILTLLHCGKMVWRRLT 240

Query: 241 DEQRR 246
           + + R
Sbjct: 241 ENRHR 245
[Close]
BLAST of Spo10248.1 vs. NCBI nr
Match: gi|657960986|ref|XP_008372075.1| (PREDICTED: gamma-secretase subunit APH1-like [Malus domestica])

HSP 1 Score: 405.6 bits (1041), Expect = 6.300e-110
Identity = 193/245 (78.78%), Postives = 226/245 (92.24%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+AAGIGYAL+ALGPSLSLF+SVI+KKPFL+LTVLSSTLLWL+SLI+LSGLWR FLP K
Sbjct: 1   MTIAAGIGYALLALGPSLSLFVSVISKKPFLVLTVLSSTLLWLISLIVLSGLWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           S++WWPYGIL+FTSV FQEGLR+L WK Y +LED LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  SSAWWPYGILIFTSVVFQEGLRVLFWKVYKKLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++ DRC+ +PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDRCSKIPFFLLSALIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVPVVHL+AG++TL+NFA GGC+I IPLL+F+A LTL+HCGKM WRR+ 
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGLVTLVNFASGGCIIGIPLLFFIAILTLLHCGKMVWRRLT 240

Query: 241 DEQRR 246
           + + R
Sbjct: 241 ENRHR 245
[Close]
BLAST of Spo10248.1 vs. NCBI nr
Match: gi|694434301|ref|XP_009344376.1| (PREDICTED: gamma-secretase subunit APH1-like [Pyrus x bretschneideri])

HSP 1 Score: 405.2 bits (1040), Expect = 8.200e-110
Identity = 193/245 (78.78%), Postives = 226/245 (92.24%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+AAGIGYAL+ALGPSLSLF+SVI+KKPFL+LTVLSSTLLWL+SLI+LSGLWR FLP K
Sbjct: 1   MTIAAGIGYALVALGPSLSLFVSVISKKPFLVLTVLSSTLLWLISLIVLSGLWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           S++WWPYGIL+FTSV FQEGLR+L WK Y +LED LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  SSAWWPYGILIFTSVVFQEGLRVLFWKVYKKLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++ DRC+ +PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDRCSKIPFFLLSALIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVPVVHL+AGM+TL++FA GGC+I IPLL+F+A LTL+HCGKM WRR+ 
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGMVTLVDFASGGCIIGIPLLFFIAILTLLHCGKMVWRRLT 240

Query: 241 DEQRR 246
           + + R
Sbjct: 241 ENRHR 245
[Close]
BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFX4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_183830 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 4.600e-136
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK
Sbjct: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG
Sbjct: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV
Sbjct: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240

Query: 241 DEQRRGITLQ 251
           DEQRRGITLQ
Sbjct: 241 DEQRRGITLQ 250
[Close]
BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CW85_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g054960 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 2.700e-128
Identity = 232/250 (92.80%), Postives = 244/250 (97.60%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAG+GYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK
Sbjct: 1   MTVAAGVGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           ST+WWPY ILVFTSVCFQEGLRILLWKAY RLE MLDAFADRLSKPRLF+TDKMQIALAG
Sbjct: 61  STAWWPYAILVFTSVCFQEGLRILLWKAYKRLEGMLDAFADRLSKPRLFMTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHG+AHAVFFCLSLLTP+FGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGLAHAVFFCLSLLTPAFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAESKR+DQYFVP +HLIAGMLTLINFAPGGC+ISIPLLYF+AALTL+HCGKM WRR+V
Sbjct: 181 GYAESKRLDQYFVPTIHLIAGMLTLINFAPGGCIISIPLLYFVAALTLMHCGKMVWRRLV 240

Query: 241 DEQRRGITLQ 251
           DE+R GITLQ
Sbjct: 241 DERRTGITLQ 250
[Close]
BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: M5XTL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010446mg PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.300e-109
Identity = 191/245 (77.96%), Postives = 223/245 (91.02%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+AAGIGYAL+ALGPSLSLF+SVI+KKPFL+LTVLSSTLLWL SLI+LSG+WR FLP K
Sbjct: 1   MTIAAGIGYALLALGPSLSLFVSVISKKPFLVLTVLSSTLLWLTSLIVLSGIWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           S++WWPY IL+FTSV FQEGLR+L WK Y RLED LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  SSTWWPYSILIFTSVAFQEGLRVLFWKVYKRLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFC+SLLTP+FGP T++ DRC+ +PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPGTFFVDRCSKIPFFLLSALIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVP+VHL+AGM+TL+NFA GGC+I IPLLYF+A LTL+HCGKM WRR+ 
Sbjct: 181 GYAERNKVDQLFVPIVHLVAGMVTLVNFASGGCIIGIPLLYFIAILTLLHCGKMVWRRLT 240

Query: 241 DEQRR 246
           + + R
Sbjct: 241 ENRGR 245
[Close]
BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: A0A061ERN6_THECC (Processing isoform 1 OS=Theobroma cacao GN=TCM_020119 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.400e-108
Identity = 193/247 (78.14%), Postives = 224/247 (90.69%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTV AGIGYAL+ALGPSLSLF+SVI+KKPFLILT+LSSTL+WL+SLIILSG+WR FLP K
Sbjct: 1   MTVTAGIGYALLALGPSLSLFVSVISKKPFLILTLLSSTLVWLISLIILSGIWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           ST+WWP+ IL+F+SV FQEGLR+L WK Y RLED+LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  STTWWPFAILIFSSVAFQEGLRLLFWKVYKRLEDILDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFC+SLLTP+FGPATY+ DRC+ +PFFL+SAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCVSLLTPAFGPATYFVDRCSQIPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVP VHL AGM+TLINFA GGC+I IPLL+ MA LTL+HCG+M WR + 
Sbjct: 181 GYAEGNKVDQLFVPSVHLAAGMMTLINFASGGCIIGIPLLFLMAILTLMHCGRMVWRSLT 240

Query: 241 DEQRRGI 248
           + QR+G+
Sbjct: 241 ENQRQGM 247
[Close]
BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: B9HH67_POPTR (Gamma-secretase subunit APH1-like family protein OS=Populus trichocarpa GN=POPTR_0007s02080g PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.800e-108
Identity = 194/244 (79.51%), Postives = 223/244 (91.39%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYAL+ALGPSLSLFISVI+KKPFLILTVLSSTLLWL+SLI+L+G+WR FLP K
Sbjct: 1   MTVAAGIGYALLALGPSLSLFISVISKKPFLILTVLSSTLLWLMSLIVLAGVWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           ST+WWP+ IL+ TSV FQEGLRIL WK Y RLED+LDAFADRL+KPRLFLTDKM IALAG
Sbjct: 61  STTWWPFAILILTSVSFQEGLRILFWKVYKRLEDILDAFADRLAKPRLFLTDKMLIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++ D+C+ +PFFL+SAIIALAFVTIHT SMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDKCSQLPFFLVSAIIALAFVTIHTCSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQYFVP VHL+AGM+TL+NFA GGC++ IPLLYFMA LTL+HCGKM WRR+ 
Sbjct: 181 GYAEGNKVDQYFVPAVHLVAGMVTLVNFASGGCVVGIPLLYFMAILTLLHCGKMVWRRLS 240

Query: 241 DEQR 245
           + ++
Sbjct: 241 ETRQ 244
[Close]
BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1_ARATH (Gamma-secretase subunit APH1-like OS=Arabidopsis thaliana GN=At2g31440 PE=2 SV=2)

HSP 1 Score: 390.6 bits (1002), Expect = 1.300e-107
Identity = 189/245 (77.14%), Postives = 220/245 (89.80%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYAL+ALGPSLSLF+SVI++KPFLILTVLSSTLLWLVSLIILSGLWR FLP K
Sbjct: 1   MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           +  WWPY +LV TSVCFQEGLR L WK Y RLED+LD+FADR+S+PRLFLTDK+QIALAG
Sbjct: 61  ANVWWPYALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT+Y +RC+ +PFFLISAIIALAFVTIHTFSMVIAF 
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYA+  +VDQ  VPV+HL AGMLTL+NFA  GC+I +PLLY +A+LTL+HCGKM W+R++
Sbjct: 181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLL 240

Query: 241 DEQRR 246
           + + +
Sbjct: 241 ESRNQ 245
[Close]
BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1_DROME (Gamma-secretase subunit Aph-1 OS=Drosophila melanogaster GN=aph-1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.300e-17
Identity = 68/208 (32.69%), Postives = 106/208 (50.96%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+    G   IA GP  +LF+  IA  P  I+ ++++   WL+SL+I S LW   +P K
Sbjct: 1   MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLI-SSLWYALIPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQI-ALA 120
              +  +G++   SVCFQE  R ++++     E  L A A+        +TD   I A  
Sbjct: 61  --EFLAFGVVF--SVCFQEAFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 120

Query: 121 GGLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAF 180
            GLG G+   +F  +++L    GP T      T + FF+ SA  AL+ + +HTF  VI F
Sbjct: 121 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFF 180

Query: 181 NGYAESKRVDQYFVPVVHLIAGMLTLIN 208
           N +  +  +   +V   HL   ++TL+N
Sbjct: 181 NAFDTNNYIHIGYVVFSHLFVSLITLLN 197
[Close]
BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1B_HUMAN (Gamma-secretase subunit APH-1B OS=Homo sapiens GN=APH1B PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 4.200e-13
Identity = 65/214 (30.37%), Postives = 101/214 (47.20%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLW---RGFL 60
           MT A   G A IA GP+L+L++  IA +P  I+ +++    WLVSL+I S +W   R  +
Sbjct: 1   MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60

Query: 61  PFKSTSWWPYGIL--VFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQ 120
             K      Y ++   F SV  QE  R   +K   +  + L +     + P + L     
Sbjct: 61  DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGLKSINPGETAPSMRL----- 120

Query: 121 IALAGGLGHGVAHAVFFCLSLLTPSFGPAT--YYADRCTWMPFFLISAIIALAFVTIHTF 180
           +A   GLG G+   VF  ++ L+ S GP T   + D      FFL SA + L  + +H F
Sbjct: 121 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDS---PQFFLYSAFMTLVIILLHVF 180

Query: 181 SMVIAFNGYAESKRVDQYFVPVVHLIAGMLTLIN 208
             ++ F+G  + K      V + HL+    T I+
Sbjct: 181 WGIVFFDGCEKKKWGILLIVLLTHLLVSAQTFIS 206
[Close]
BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1B_MOUSE (Gamma-secretase subunit APH-1B OS=Mus musculus GN=Aph1b PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.100e-13
Identity = 63/216 (29.17%), Postives = 101/216 (46.76%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT A   G A IA GP+L+L++  IA  P  ++ +++    WLVSL++ S  W       
Sbjct: 1   MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60

Query: 61  STSWWP-------YGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDK 120
                P       +G+L+  SVC QE  R+  +K   +  + L +     + P + L   
Sbjct: 61  DNRDGPVQNYLLIFGVLL--SVCIQELFRLAYYKLLKKASEGLKSINPEETAPSMRL--- 120

Query: 121 MQIALAGGLGHGVAHAVFFCLSLLTPSFGPAT--YYADRCTWMPFFLISAIIALAFVTIH 180
             +A   GLG G+   VF  ++ L+ S GP T   + D      FFL SA + L  + +H
Sbjct: 121 --LAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDS---PQFFLNSAFMTLVVIMLH 180

Query: 181 TFSMVIAFNGYAESKRVDQYFVPVVHLIAGMLTLIN 208
            F  V+ F+G  ++K      V + HL+    T ++
Sbjct: 181 VFWGVVFFDGCEKNKWYTLLTVLLTHLVVSTQTFLS 206
[Close]
BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1B_PONAB (Gamma-secretase subunit APH-1B OS=Pongo abelii GN=APH1B PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.300e-13
Identity = 64/214 (29.91%), Postives = 101/214 (47.20%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLW---RGFL 60
           MT A   G A IA GP+L+L++  IA +P  I+ +++    WLVSL+I S +W   R  +
Sbjct: 1   MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60

Query: 61  PFKSTSWWPYGIL--VFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQ 120
             K      Y ++   F SV  QE  R   ++   +  + L +     + P + L     
Sbjct: 61  DNKDGPTQKYLLIFGTFVSVYIQEMFRFAYYRLLKKASEGLKSINPGETAPSMRL----- 120

Query: 121 IALAGGLGHGVAHAVFFCLSLLTPSFGPAT--YYADRCTWMPFFLISAIIALAFVTIHTF 180
           +A   GLG G+   VF  ++ L+ S GP T   + D      FFL SA + L  + +H F
Sbjct: 121 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDS---PQFFLYSAFMTLVIILLHVF 180

Query: 181 SMVIAFNGYAESKRVDQYFVPVVHLIAGMLTLIN 208
             ++ F+G  + K      V + HL+    T I+
Sbjct: 181 WGIVFFDGCEKKKWGILLIVLLTHLLVSAQTFIS 206
[Close]
BLAST of Spo10248.1 vs. TAIR (Arabidopsis)
Match: AT2G31440.1 (INVOLVED IN: positive regulation of catalytic activity, protein processing)

HSP 1 Score: 390.6 bits (1002), Expect = 7.400e-109
Identity = 189/245 (77.14%), Postives = 220/245 (89.80%), Query Frame = 1 

		  

Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYAL+ALGPSLSLF+SVI++KPFLILTVLSSTLLWLVSLIILSGLWR FLP K
Sbjct: 1   MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           +  WWPY +LV TSVCFQEGLR L WK Y RLED+LD+FADR+S+PRLFLTDK+QIALAG
Sbjct: 61  ANVWWPYALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT+Y +RC+ +PFFLISAIIALAFVTIHTFSMVIAF 
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYA+  +VDQ  VPV+HL AGMLTL+NFA  GC+I +PLLY +A+LTL+HCGKM W+R++
Sbjct: 181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLL 240

Query: 241 DEQRR 246
           + + +
Sbjct: 241 ESRNQ 245
The following BLAST results are available for this feature:
BLAST of Spo10248.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902157617|gb|KNA06140.1|6.7e-136100.hypothetical protein SOVF_1838... [more]
gi|731322328|ref|XP_010671828.1|3.9e-12892.8PREDICTED: gamma-secretase sub... [more]
gi|694372756|ref|XP_009363655.1|2.8e-11079.1PREDICTED: gamma-secretase sub... [more]
gi|657960986|ref|XP_008372075.1|6.3e-11078.7PREDICTED: gamma-secretase sub... [more]
gi|694434301|ref|XP_009344376.1|8.2e-11078.7PREDICTED: gamma-secretase sub... [more]
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BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QFX4_SPIOL4.6e-136100.Uncharacterized protein OS=Spi... [more]
A0A0J8CW85_BETVU2.7e-12892.8Uncharacterized protein OS=Bet... [more]
M5XTL9_PRUPE6.3e-10977.9Uncharacterized protein OS=Pru... [more]
A0A061ERN6_THECC1.4e-10878.1Processing isoform 1 OS=Theobr... [more]
B9HH67_POPTR1.8e-10879.5Gamma-secretase subunit APH1-l... [more]
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BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
APH1_ARATH1.3e-10777.1Gamma-secretase subunit APH1-l... [more]
APH1_DROME1.3e-1732.6Gamma-secretase subunit Aph-1 ... [more]
APH1B_HUMAN4.2e-1330.3Gamma-secretase subunit APH-1B... [more]
APH1B_MOUSE7.1e-1329.1Gamma-secretase subunit APH-1B... [more]
APH1B_PONAB9.3e-1329.9Gamma-secretase subunit APH-1B... [more]
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BLAST of Spo10248.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G31440.17.4e-10977.1INVOLVED IN: positive regulati... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009294Gamma-secretase subunit Aph-1PANTHERPTHR12889GAMMA-SECRETASE SUBUNIT APH-1coord: 2..245
score: 1.6E
IPR009294Gamma-secretase subunit Aph-1PFAMPF06105Aph-1coord: 2..235
score: 5.3
NoneNo IPR availablePANTHERPTHR12889:SF0GAMMA-SECRETASE SUBUNIT APH-1coord: 2..245
score: 1.6E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007219 Notch signaling pathway
biological_process GO:0048731 system development
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0044238 primary metabolic process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0050793 regulation of developmental process
biological_process GO:0050896 response to stimulus
biological_process GO:0006810 transport
biological_process GO:0033036 macromolecule localization
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0007165 signal transduction
biological_process GO:0015031 protein transport
biological_process GO:0042147 retrograde transport, endosome to Golgi
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0071702 organic substance transport
biological_process GO:0010467 gene expression
biological_process GO:0044237 cellular metabolic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0016197 endosomal transport
biological_process GO:0016485 protein processing
biological_process GO:0055085 transmembrane transport
biological_process GO:0006857 oligopeptide transport
biological_process GO:0008152 metabolic process
biological_process GO:0009987 cellular process
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0031902 late endosome membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0030904 retromer complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0005643 nuclear pore
cellular_component GO:0009507 chloroplast
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005488 binding
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0035673 oligopeptide transmembrane transporter activity
molecular_function GO:0003676 nucleic acid binding
RNA-Seq Expression