Spo10262 (gene)

Overview
NameSpo10262
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBEST plant protein match is: (TAIR:plant.1) protein, putative
Locationchr3 : 54310737 .. 54313025 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTAGTATTCCCCCCTTTTTACTCTCCAGTTTCTGTGCACCCATTTCTTTCTTTCCACTATCTCATGGCATGTTTAGAAATGTACAACAACTCTCTTTCTCCTCATTCTCATTCTCAGGCTCCTCCAATGAGCCCCAGAATCTCCTTCTCAAATGACTTTGTTGAATCTCACTCTCATCAATCTCACTCTCACCACAACAACAATTCACACCTTTTTGCAAGATCAGAAGTAGCACCTGCTTCCTCTGATTTCGAATTCTCTGTTACAAATTCCAACATCCTTACAACTGCTGATGAACTCTTCTCTAAGGGAAGGCTTTTACCCTTCAAAGACAACAATCAGATGCAGAGGACTTTGAGAGATGAGCTTCTTGTTACTGATGATGATGTTAGCTTCTCTCTCAAGCCTCCAAAAGGGTCATCATCTTCATCATCTTCATCTTCTTCGAATAGGTGGAAAGGGTTTCTGGGTCTTAGAAAGTCCCACATTGGGTCTAAAAAGCCTGAGAAAATCGATGATTCTGCTAAAAGGTTTTCTTTCTCCCTTGAAGATCCTAATCGTGCCAAATCTCCTCAGGTAACTACTTTTAATCTTTAATCTTTCTGGGTCCGGATTTAATAGTGTTTCAATTCTCAGATCCTTTTCAACTAAAATTTGTTGAATGTTTGGTTGAAATTTCAGGAAATAGTGAGCAGTGACATGGAAATGGGGTTTTAAATTATGGAGATCAGTTTGGTGTGCTGTTCATAATCGGGGAAGGTGCAACGTTGACTGTTTTTATCTTTTTTTTTTTTGGTTCTCTATTTTTTTTACCTTCAATTTTTCAGAGGAGGTTATGATAGAATCTAGAGGATGCTAATAGTATTGTGGGTAATTACGGGCTTATTAGTGGGTCTGGGTCGGGTTTCAACTTGATTCTTCACCTTTTATTTATGGGACTTTTTTTTTCTTCTTCTAAGTTTTGTAGTGTTTTTTATGCTCTAGAAGTTTGTCCTTTTAGGTGTTTTGATGTACAAAAGGGAAAATTTGATTTGCAGGTATTTCTTTGTTTTGGTTCAGATGATTAGATCTGTTGTGGTTCTTAGTTGGGGTCTTGTAATGGGGTAACTTCTTTGAAATCTAATGTACTTTGTGTTACAAATGTAATCAACTACGAATAGCCTTTTTGCAGATCATAACTTCATTATTCGTGTCTCTCTTTCGTCTAATTCTCTTCTTATTGAATTGTGTCATTGTGTCTGTAATTTGTATGTGTGTGGGAATCTCTCTTACCTACCTACAATTGGGTCATCGTTTGGTTACGGGTCTGGTATAATCGGATAATGCAGTTGTACGGGGCCATTATACTTATGCGGATTGAATATGTGATTTTCTTTCGGGTCCCTTCGGGTTTGTTAAAAATCGATTGGATCGGGTCATTTTTTAAGAGCCTTATCAGTCTATCACTCATCACTTCATCAGTAGTGGTGTCAGATGGGTCATTCGGCTCAAATAGGGTCCGATTTGGATGTCAATGCCCGGGAAATTGGGTATATATCATGTCCATATAAGAAATCTTTTGGATCGTGTCAAATTCAGTTCTATTAAAGGTGTCGTTTGGTTAATCCTGAGGACTGGAAAGTAGAACTTCGTAGGAAGAAATTTTTCTCATGTATAAGCTGGTGATAAGTGTGGTTAAACCTGGACAATACATTTTTATGGGAATTTCCTTCCCTAGGTAATCAAGTAAGCAATTTCCTCTATTTTTGTAAGAAGTATGAGTTCTCATGTTTTTTACAACCAAACAATCCTACCATCTTCCCATAGTTATGTCAACCAAATATCACCTGATATGGAGTAATAAATTTATTATAGGCATTTTAGCTATATTAGATTGTTACAATATATATACGTATTATACGGAGTATATATTATGCTAAAATTGTAATATCTTAGAGATACGGAGTTACCATATTAGCCTCCCAATGTAACATATATACGGAGTGAATTAACGAGAACGACGAGATATTACACATTATTTGTCATAGATTTTGTTCGGGCCATCAAATTTCTAATACGGGCCAGGTTTGGCCATATATTTTGGGTACGAGTCGGATCATTTTTGCCGGATATACTCATTATATTGATAGTTTCATTTGAATAAAGAGGGTTAAAACTTACGGAATACAAGAGAAATTGATGGAAAAGAGATTGAAGTAGGTATCAAGGGCAATTGACGGAAGAGATTGAAATTTAGATTTTCTTAGATAAGGTTACAGTCCCTACCGATTACAGATGGGATTGTTTAG

mRNA sequence

ACTAGTATTCCCCCCTTTTTACTCTCCAGTTTCTGTGCACCCATTTCTTTCTTTCCACTATCTCATGGCATGTTTAGAAATGTACAACAACTCTCTTTCTCCTCATTCTCATTCTCAGGCTCCTCCAATGAGCCCCAGAATCTCCTTCTCAAATGACTTTGTTGAATCTCACTCTCATCAATCTCACTCTCACCACAACAACAATTCACACCTTTTTGCAAGATCAGAAGTAGCACCTGCTTCCTCTGATTTCGAATTCTCTGTTACAAATTCCAACATCCTTACAACTGCTGATGAACTCTTCTCTAAGGGAAGGCTTTTACCCTTCAAAGACAACAATCAGATGCAGAGGACTTTGAGAGATGAGCTTCTTGTTACTGATGATGATGTTAGCTTCTCTCTCAAGCCTCCAAAAGGGTCATCATCTTCATCATCTTCATCTTCTTCGAATAGGTGGAAAGGGTTTCTGGGTCTTAGAAAGTCCCACATTGGGTCTAAAAAGCCTGAGAAAATCGATGATTCTGCTAAAAGGTTTTCTTTCTCCCTTGAAGATCCTAATCGTGCCAAATCTCCTCAGTCCCTACCGATTACAGATGGGATTGTTTAG

Coding sequence (CDS)

ATGGCATGTTTAGAAATGTACAACAACTCTCTTTCTCCTCATTCTCATTCTCAGGCTCCTCCAATGAGCCCCAGAATCTCCTTCTCAAATGACTTTGTTGAATCTCACTCTCATCAATCTCACTCTCACCACAACAACAATTCACACCTTTTTGCAAGATCAGAAGTAGCACCTGCTTCCTCTGATTTCGAATTCTCTGTTACAAATTCCAACATCCTTACAACTGCTGATGAACTCTTCTCTAAGGGAAGGCTTTTACCCTTCAAAGACAACAATCAGATGCAGAGGACTTTGAGAGATGAGCTTCTTGTTACTGATGATGATGTTAGCTTCTCTCTCAAGCCTCCAAAAGGGTCATCATCTTCATCATCTTCATCTTCTTCGAATAGGTGGAAAGGGTTTCTGGGTCTTAGAAAGTCCCACATTGGGTCTAAAAAGCCTGAGAAAATCGATGATTCTGCTAAAAGGTTTTCTTTCTCCCTTGAAGATCCTAATCGTGCCAAATCTCCTCAGTCCCTACCGATTACAGATGGGATTGTTTAG

Protein sequence

MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSDFEFSVTNSNILTTADELFSKGRLLPFKDNNQMQRTLRDELLVTDDDVSFSLKPPKGSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEKIDDSAKRFSFSLEDPNRAKSPQSLPITDGIV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10262.1Spo10262.1mRNA


Homology
[Close]
BLAST of Spo10262.1 vs. NCBI nr
Match: gi|902198051|gb|KNA13591.1| (hypothetical protein SOVF_115290 [Spinacia oleracea])

HSP 1 Score: 281.6 bits (719), Expect = 9.800e-73
Identity = 148/156 (94.87%), Postives = 150/156 (96.15%), Query Frame = 1 

		  

Query: 22  MSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSDFEFSVTNSNILTTADELFS 81
           MSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSDFEFSVTNSNILTTADELFS
Sbjct: 1   MSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSDFEFSVTNSNILTTADELFS 60

Query: 82  KGRLLPFKDNNQMQRTLRDELLVTDDDVSFSLKPPKGSSSSSSSSSSNRWKGFLGLRKSH 141
           KGRLLPFKDNNQMQRTLRDELLVTDDDVSFSLKPPKG   SSSSSSSNRWKGFLGLRKSH
Sbjct: 61  KGRLLPFKDNNQMQRTLRDELLVTDDDVSFSLKPPKG---SSSSSSSNRWKGFLGLRKSH 120

Query: 142 IGSKKPEKIDDSAKRFSFSLEDPNRAKSPQSLPITD 178
           IGSKKPEKIDDSAKRFSFSLEDPNRAKSPQ +  +D
Sbjct: 121 IGSKKPEKIDDSAKRFSFSLEDPNRAKSPQEIVSSD 153
[Close]
BLAST of Spo10262.1 vs. NCBI nr
Match: gi|731373360|ref|XP_010666628.1| (PREDICTED: uncharacterized protein LOC104883768 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 209.1 bits (531), Expect = 6.200e-51
Identity = 121/185 (65.41%), Postives = 137/185 (74.05%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACLEMYNN+     H+   PMSPRISFSNDF E+HSH  +S H  N+     ++  PAS
Sbjct: 1   MACLEMYNNN----HHAHPLPMSPRISFSNDFAETHSH--NSQHLLNTTTKTAAQTQPAS 60

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDNN----QMQRTLRDELLVTDDDVSFSLKPP 120
           SDFEFSVTN N+L++ADELFSKGRLLPFK+NN    QMQRTLRDELLV DD+ +FSLKPP
Sbjct: 61  SDFEFSVTNHNMLSSADELFSKGRLLPFKNNNNGNTQMQRTLRDELLVNDDETAFSLKPP 120

Query: 121 KGSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEK---IDDSAKRFSFSLEDPNRAKSPQSL 179
           KG       SSSNRWKGFLGLRKSHIG KKPEK     DSA+ FSFSLEDPN  KSPQ +
Sbjct: 121 KG-------SSSNRWKGFLGLRKSHIGPKKPEKNVASFDSARMFSFSLEDPNLTKSPQDM 172
[Close]
BLAST of Spo10262.1 vs. NCBI nr
Match: gi|823192552|ref|XP_012491794.1| (PREDICTED: uncharacterized protein LOC105803907 isoform X1 [Gossypium raimondii])

HSP 1 Score: 148.3 bits (373), Expect = 1.300e-32
Identity = 96/188 (51.06%), Postives = 121/188 (64.36%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACL+MYN+    H H   PPMSPRISFSNDFVE+        +         S  AP S
Sbjct: 40  MACLDMYNSEHKGHHH-HCPPMSPRISFSNDFVETQQVMKQERN---------SREAPVS 99

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDN--NQMQRTLRDELLV-TDDDVSFSLKPPK 120
           SDFEFSV+N ++++ ADELF KG+LLPFKDN  NQMQRTLR+ELL   DDD + +  PPK
Sbjct: 100 SDFEFSVSNYSMMS-ADELFFKGKLLPFKDNCNNQMQRTLREELLAGDDDDNNVTRTPPK 159

Query: 121 GSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEKIDDSA-------KRFSFSLEDPNRAKSP 179
           GS+         RWKGFLGL+++HIGSKK +KI++ +       KRF+F  ED    K+ 
Sbjct: 160 GST---------RWKGFLGLKRTHIGSKKADKINEVSMERMGDNKRFAFVHEDTQVVKTS 206
[Close]
BLAST of Spo10262.1 vs. NCBI nr
Match: gi|763776577|gb|KJB43700.1| (hypothetical protein B456_007G212200 [Gossypium raimondii])

HSP 1 Score: 148.3 bits (373), Expect = 1.300e-32
Identity = 96/188 (51.06%), Postives = 121/188 (64.36%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACL+MYN+    H H   PPMSPRISFSNDFVE+        +         S  AP S
Sbjct: 6   MACLDMYNSEHKGHHH-HCPPMSPRISFSNDFVETQQVMKQERN---------SREAPVS 65

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDN--NQMQRTLRDELLV-TDDDVSFSLKPPK 120
           SDFEFSV+N ++++ ADELF KG+LLPFKDN  NQMQRTLR+ELL   DDD + +  PPK
Sbjct: 66  SDFEFSVSNYSMMS-ADELFFKGKLLPFKDNCNNQMQRTLREELLAGDDDDNNVTRTPPK 125

Query: 121 GSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEKIDDSA-------KRFSFSLEDPNRAKSP 179
           GS+         RWKGFLGL+++HIGSKK +KI++ +       KRF+F  ED    K+ 
Sbjct: 126 GST---------RWKGFLGLKRTHIGSKKADKINEVSMERMGDNKRFAFVHEDTQVVKTS 172
[Close]
BLAST of Spo10262.1 vs. NCBI nr
Match: gi|823192555|ref|XP_012491795.1| (PREDICTED: uncharacterized protein LOC105803907 isoform X2 [Gossypium raimondii])

HSP 1 Score: 148.3 bits (373), Expect = 1.300e-32
Identity = 96/188 (51.06%), Postives = 121/188 (64.36%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACL+MYN+    H H   PPMSPRISFSNDFVE+        +         S  AP S
Sbjct: 1   MACLDMYNSEHKGHHH-HCPPMSPRISFSNDFVETQQVMKQERN---------SREAPVS 60

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDN--NQMQRTLRDELLV-TDDDVSFSLKPPK 120
           SDFEFSV+N ++++ ADELF KG+LLPFKDN  NQMQRTLR+ELL   DDD + +  PPK
Sbjct: 61  SDFEFSVSNYSMMS-ADELFFKGKLLPFKDNCNNQMQRTLREELLAGDDDDNNVTRTPPK 120

Query: 121 GSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEKIDDSA-------KRFSFSLEDPNRAKSP 179
           GS+         RWKGFLGL+++HIGSKK +KI++ +       KRF+F  ED    K+ 
Sbjct: 121 GST---------RWKGFLGLKRTHIGSKKADKINEVSMERMGDNKRFAFVHEDTQVVKTS 167
[Close]
BLAST of Spo10262.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R248_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115290 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.900e-73
Identity = 148/156 (94.87%), Postives = 150/156 (96.15%), Query Frame = 1 

		  

Query: 22  MSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSDFEFSVTNSNILTTADELFS 81
           MSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSDFEFSVTNSNILTTADELFS
Sbjct: 1   MSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSDFEFSVTNSNILTTADELFS 60

Query: 82  KGRLLPFKDNNQMQRTLRDELLVTDDDVSFSLKPPKGSSSSSSSSSSNRWKGFLGLRKSH 141
           KGRLLPFKDNNQMQRTLRDELLVTDDDVSFSLKPPKG   SSSSSSSNRWKGFLGLRKSH
Sbjct: 61  KGRLLPFKDNNQMQRTLRDELLVTDDDVSFSLKPPKG---SSSSSSSNRWKGFLGLRKSH 120

Query: 142 IGSKKPEKIDDSAKRFSFSLEDPNRAKSPQSLPITD 178
           IGSKKPEKIDDSAKRFSFSLEDPNRAKSPQ +  +D
Sbjct: 121 IGSKKPEKIDDSAKRFSFSLEDPNRAKSPQEIVSSD 153
[Close]
BLAST of Spo10262.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B856_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003380 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.300e-51
Identity = 121/185 (65.41%), Postives = 137/185 (74.05%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACLEMYNN+     H+   PMSPRISFSNDF E+HSH  +S H  N+     ++  PAS
Sbjct: 1   MACLEMYNNN----HHAHPLPMSPRISFSNDFAETHSH--NSQHLLNTTTKTAAQTQPAS 60

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDNN----QMQRTLRDELLVTDDDVSFSLKPP 120
           SDFEFSVTN N+L++ADELFSKGRLLPFK+NN    QMQRTLRDELLV DD+ +FSLKPP
Sbjct: 61  SDFEFSVTNHNMLSSADELFSKGRLLPFKNNNNGNTQMQRTLRDELLVNDDETAFSLKPP 120

Query: 121 KGSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEK---IDDSAKRFSFSLEDPNRAKSPQSL 179
           KG       SSSNRWKGFLGLRKSHIG KKPEK     DSA+ FSFSLEDPN  KSPQ +
Sbjct: 121 KG-------SSSNRWKGFLGLRKSHIGPKKPEKNVASFDSARMFSFSLEDPNLTKSPQDM 172
[Close]
BLAST of Spo10262.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TJ05_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G212200 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.100e-33
Identity = 96/188 (51.06%), Postives = 121/188 (64.36%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACL+MYN+    H H   PPMSPRISFSNDFVE+        +         S  AP S
Sbjct: 6   MACLDMYNSEHKGHHH-HCPPMSPRISFSNDFVETQQVMKQERN---------SREAPVS 65

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDN--NQMQRTLRDELLV-TDDDVSFSLKPPK 120
           SDFEFSV+N ++++ ADELF KG+LLPFKDN  NQMQRTLR+ELL   DDD + +  PPK
Sbjct: 66  SDFEFSVSNYSMMS-ADELFFKGKLLPFKDNCNNQMQRTLREELLAGDDDDNNVTRTPPK 125

Query: 121 GSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEKIDDSA-------KRFSFSLEDPNRAKSP 179
           GS+         RWKGFLGL+++HIGSKK +KI++ +       KRF+F  ED    K+ 
Sbjct: 126 GST---------RWKGFLGLKRTHIGSKKADKINEVSMERMGDNKRFAFVHEDTQVVKTS 172
[Close]
BLAST of Spo10262.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PCZ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G212200 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.100e-33
Identity = 96/188 (51.06%), Postives = 121/188 (64.36%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACL+MYN+    H H   PPMSPRISFSNDFVE+        +         S  AP S
Sbjct: 1   MACLDMYNSEHKGHHH-HCPPMSPRISFSNDFVETQQVMKQERN---------SREAPVS 60

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDN--NQMQRTLRDELLV-TDDDVSFSLKPPK 120
           SDFEFSV+N ++++ ADELF KG+LLPFKDN  NQMQRTLR+ELL   DDD + +  PPK
Sbjct: 61  SDFEFSVSNYSMMS-ADELFFKGKLLPFKDNCNNQMQRTLREELLAGDDDDNNVTRTPPK 120

Query: 121 GSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEKIDDSA-------KRFSFSLEDPNRAKSP 179
           GS+         RWKGFLGL+++HIGSKK +KI++ +       KRF+F  ED    K+ 
Sbjct: 121 GST---------RWKGFLGLKRTHIGSKKADKINEVSMERMGDNKRFAFVHEDTQVVKTS 167
[Close]
BLAST of Spo10262.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SNZ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G212200 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.700e-32
Identity = 93/181 (51.38%), Postives = 116/181 (64.09%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACL+MYN+    H H   PPMSPRISFSNDFVE+        +         S  AP S
Sbjct: 1   MACLDMYNSEHKGHHH-HCPPMSPRISFSNDFVETQQVMKQERN---------SREAPVS 60

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDN--NQMQRTLRDELLV-TDDDVSFSLKPPK 120
           SDFEFSV+N ++++ ADELF KG+LLPFKDN  NQMQRTLR+ELL   DDD + +  PPK
Sbjct: 61  SDFEFSVSNYSMMS-ADELFFKGKLLPFKDNCNNQMQRTLREELLAGDDDDNNVTRTPPK 120

Query: 121 GSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEKIDDSA-------KRFSFSLEDPNRAKSP 172
           GS+         RWKGFLGL+++HIGSKK +KI++ +       KRF+F  ED    K+ 
Sbjct: 121 GST---------RWKGFLGLKRTHIGSKKADKINEVSMERMGDNKRFAFVHEDTQVVKTS 161
[Close]
BLAST of Spo10262.1 vs. TAIR (Arabidopsis)
Match: AT5G66800.1 (unknown protein)

HSP 1 Score: 125.6 bits (314), Expect = 3.200e-29
Identity = 85/159 (53.46%), Postives = 107/159 (67.30%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MACLEMYN++          PMSPRISFSNDFVE     + +    +S L  +   + + 
Sbjct: 1   MACLEMYNSN-----GGGGTPMSPRISFSNDFVEIRPETTKT--TRSSPLSKQEGSSSSF 60

Query: 61  SD-FEFSVTNSNILTTADELFSKGRLLPFKDNNQMQRTLRDELLVTDDDVS--------F 120
           SD FEFSV+N  ++  ADELFSKG+LLPFK+ NQ+QRTLR+ELLV +D+          F
Sbjct: 61  SDNFEFSVSNYTMMP-ADELFSKGKLLPFKETNQVQRTLREELLVEEDEEEGPRDATNIF 120

Query: 121 SLKPPKGSSSSSSSSSS-NRWKGFLGLRKSHIGSKKPEK 150
           SLKPP  SSSSSSSSSS  RWKG LGL+++H+GSK  E+
Sbjct: 121 SLKPPIFSSSSSSSSSSKGRWKGLLGLKRAHVGSKNNEE 151
[Close]
BLAST of Spo10262.1 vs. TAIR (Arabidopsis)
Match: AT3G50640.1 (unknown protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.500e-18
Identity = 63/157 (40.13%), Postives = 98/157 (62.42%), Query Frame = 1 

		  

Query: 1   MACLEMYNNSLSPHSHSQAPPMSPRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPAS 60
           MA LEM+N+             + RISFSN+FVE  S +S++  NN   + +RS  +  S
Sbjct: 1   MARLEMHNSMNG----------AARISFSNEFVEIRSEKSNAKSNN---INSRSSFSMPS 60

Query: 61  SDFEFSVTNSNILTTADELFSKGRLLPFKDNNQMQRTLRDELLVTD-----DDVSFSLKP 120
           +DF FSVT+ +++  ADE+F KG++LPFK+ + + RTL +ELL  +     D  +FSL+P
Sbjct: 61  ADFAFSVTDYSMIP-ADEIFLKGKILPFKETSHVHRTLGEELLTEEEGSMVDGNTFSLRP 120

Query: 121 PKGSSSSSSSSSSNRWKGFLGLRKSHIGSKKPEKIDD 153
                SSSS S+   W+  LGL+++H+ SKK +K+++
Sbjct: 121 I--LLSSSSFSTKGTWRELLGLKRTHVRSKKTDKVNE 141
[Close]
BLAST of Spo10262.1 vs. TAIR (Arabidopsis)
Match: AT3G19200.1 (unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.800e-8
Identity = 48/117 (41.03%), Postives = 60/117 (51.28%), Query Frame = 1 

		  

Query: 25  RISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSDFEFSVTNSNILTTADELFSKGR 84
           RISFSNDF +S S  + S  +       + + AP SSDF+F+V N    + ADE+F  G 
Sbjct: 18  RISFSNDFADSDSKHTASRADGQM----KYKEAPVSSDFKFNVENFGFTSAADEIFFGGV 77

Query: 85  LLPFKDNNQMQ-RTLRDELLVTDDDVSFSLKPPKGSSSSSSSSSSNRWKGFLGLRKS 141
           LLP +   Q +  TLRDEL   D D            + SS  S N WK  LGL KS
Sbjct: 78  LLPLEKTTQRKVTTLRDELSAQDSD-----------RTISSKGSRNWWK--LGLNKS 117
[Close]
BLAST of Spo10262.1 vs. TAIR (Arabidopsis)
Match: AT4G34419.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.700e-6
Identity = 48/130 (36.92%), Postives = 62/130 (47.69%), Query Frame = 1 

		  

Query: 24  PRISFSNDFVESHSHQSHSHHNNNSHLFARSEVAPASSD-FEFSVTNSNILTTADELFSK 83
           PRISFS+ F  +             H   + + AP SSD FEF V N + +TTADE+F  
Sbjct: 18  PRISFSSGFAAT------------KHEMIKYKEAPVSSDDFEFGVENFS-MTTADEIFFD 77

Query: 84  GRLLPFKD---NNQMQRTLRDELLVTDDDVSFSLKPPKGSSSSSSSSSSNRWKGFLGLRK 143
           G +LP K+     +   TLR+EL   D D          S  S S  SS  W+  LGL  
Sbjct: 78  GMILPLKEEVNTTKRMSTLREELSEEDGD----------SPRSKSKGSSGWWRERLGL-- 122

Query: 144 SHIGSKKPEK 150
           + + SKK  K
Sbjct: 138 AFVRSKKDHK 122
The following BLAST results are available for this feature:
BLAST of Spo10262.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902198051|gb|KNA13591.1|9.8e-7394.8hypothetical protein SOVF_1152... [more]
gi|731373360|ref|XP_010666628.1|6.2e-5165.4PREDICTED: uncharacterized pro... [more]
gi|823192552|ref|XP_012491794.1|1.3e-3251.0PREDICTED: uncharacterized pro... [more]
gi|763776577|gb|KJB43700.1|1.3e-3251.0hypothetical protein B456_007G... [more]
gi|823192555|ref|XP_012491795.1|1.3e-3251.0PREDICTED: uncharacterized pro... [more]
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BLAST of Spo10262.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R248_SPIOL6.9e-7394.8Uncharacterized protein OS=Spi... [more]
A0A0J8B856_BETVU4.3e-5165.4Uncharacterized protein OS=Bet... [more]
A0A0D2TJ05_GOSRA9.1e-3351.0Uncharacterized protein OS=Gos... [more]
A0A0D2PCZ5_GOSRA9.1e-3351.0Uncharacterized protein OS=Gos... [more]
A0A0D2SNZ4_GOSRA7.7e-3251.3Uncharacterized protein OS=Gos... [more]
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BLAST of Spo10262.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo10262.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G66800.13.2e-2953.4unknown protein[more]
AT3G50640.12.5e-1840.1unknown protein[more]
AT3G19200.11.8e-841.0unknown protein[more]
AT4G34419.11.7e-636.9unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31722FAMILY NOT NAMEDcoord: 1..149
score: 7.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0030091 protein repair
biological_process GO:0006979 response to oxidative stress
biological_process GO:0006465 signal peptide processing
biological_process GO:0006508 proteolysis
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0007033 vacuole organization
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007030 Golgi organization
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0009058 biosynthetic process
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0032940 secretion by cell
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005768 endosome
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005787 signal peptidase complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0009579 thylakoid
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005773 vacuole
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0019003 GDP binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo002830.76Barchart | Table
Spo010680.75Barchart | Table
Spo054020.75Barchart | Table
Spo270810.72Barchart | Table
Spo209520.72Barchart | Table
Spo135180.71Barchart | Table
Spo121300.71Barchart | Table
Spo269510.71Barchart | Table
Spo205440.71Barchart | Table
Spo173290.71Barchart | Table
Spo003620.70Barchart | Table
Spo260130.70Barchart | Table
Spo025130.69Barchart | Table
Spo195990.69Barchart | Table
Spo031950.69Barchart | Table
Spo088500.69Barchart | Table
Spo056400.69Barchart | Table
Spo271620.68Barchart | Table
Spo012610.68Barchart | Table
Spo131800.68Barchart | Table
Spo156300.68Barchart | Table
Spo158240.68Barchart | Table
Spo173910.68Barchart | Table
Spo174970.68Barchart | Table
Spo235880.68Barchart | Table
Spo258760.68Barchart | Table
Spo174450.67Barchart | Table
Spo024440.67Barchart | Table
Spo177780.67Barchart | Table
Spo179590.67Barchart | Table
Spo188280.67Barchart | Table
Spo192450.67Barchart | Table
Spo076850.67Barchart | Table
Spo253300.67Barchart | Table
Spo142120.67Barchart | Table
Spo134820.67Barchart | Table
Spo224420.67Barchart | Table
Spo041420.67Barchart | Table
Spo097690.67Barchart | Table
Spo163820.67Barchart | Table
Spo168040.67Barchart | Table
Spo171610.67Barchart | Table
Spo139410.67Barchart | Table
Spo096050.67Barchart | Table
Spo264270.67Barchart | Table
Spo122340.66Barchart | Table
Spo132100.66Barchart | Table
Spo097520.66Barchart | Table
Spo140080.66Barchart | Table
Spo143420.66Barchart | Table
Spo041040.66Barchart | Table
Spo171690.66Barchart | Table
Spo072360.66Barchart | Table
Spo222560.66Barchart | Table
Spo249760.66Barchart | Table
Spo251710.66Barchart | Table
Spo099930.66Barchart | Table
Spo108950.66Barchart | Table
Spo115090.66Barchart | Table
Spo119510.66Barchart | Table
Spo019340.65Barchart | Table
Spo242550.65Barchart | Table
Spo108640.65Barchart | Table
Spo251070.65Barchart | Table
Spo131930.65Barchart | Table
Spo157820.65Barchart | Table
Spo213230.65Barchart | Table
Spo114310.65Barchart | Table
Spo222680.65Barchart | Table
Spo012430.65Barchart | Table
Spo228110.65Barchart | Table
Spo233840.65Barchart | Table