Spo10300 (gene)

Overview
NameSpo10300
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPeptidyl-tRNA hydrolase 2-like protein
Locationchr3 : 8952864 .. 8958268 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTGATATGGGCTACTTCAAAATTACAAACGGGTCTGGGTCTGTTCTCGGATCCGGATCACTACTGATTTTAGTCTTGGTTTTGCAGTCTCTTCAAAAACCACCATTATTCCTAAAACCACAGTCTTCTCTCTCCTCCTCTTCAGCTGCCCGCAAACATTGAGAAGGGCATGCTGCTCACCGTTTGATCTCCAGGATTTTCTTCACTCTGCAGATTATATTTGACGATGACGATAATTTTTTAGGTGCCATTTTTATTTATTTTTTTCCATTTATCATTTGGATAATATTCGCTGCTGCAAAATTCGGCTTATTCGGCTTGGTATGTAATTTTTTCAATTGTTTTTGCCAATTTCTCTTTGTTAATATGCATTTATTTTCATATGAAATACTGAATGTTTTGAGATTCCAGTTATTTTTTTAGTTTTCTGAATATTTTTTGATTAGTTGGATTATCTTGTTCATTGCTAATTGATTCAATAATTGAAGTTATGTGTATAATCATAGATACCTGATCATGTAAATGCATTGAAAATGTTGATTATGACATTAGTTTTGCTGAATTTGTGAGTGAATGACAGTCAAAGTCTCAAAGATGCTTGCCTTAGCTATACTGTTGGCATATTAGCTGCATATGTTTAAATATTTAGTTGTATACACAGAGAAAATTATATAGGCGGCACCCTTTCCGGTGTCCGGTGATTCGCGGGCATCTGAAATAGTGATTGAGTGAATGTAGATTGAGACGTCGAGTTAGTAATCTTAGTAACAATGTGTTGAGCATCTAGATTGGCAGATTGAAATTTATGTTATGAGGAGAATTATTGTATGTATCACCATGATTATAAGTCATATAGTTGTTCTCGTCACAAGATAATGGCATTTCTTGTCTGTTTAGTTAGTAAATCGACTGTTTAATTCGTAGGGTGCCTTAAGTGATGTATAGTAGGTTTTTCTTGTCTAATTATTGTTTGTTTTTCCTCTGGTGATGAGGTGTTGGTAGTTGTATTGTTACTGTCTTCTTTTTGATGTTTTTGTTATCTTAATTGTTAGACACAATAATATGTAAGGGTTTACATTTACTATATATATCTACAATGCTATAAATGATACAATAATAATTACATATTATTGTGTCTAACATTAATTATGGCGTATTTATTGATTATCAATGTTAGAGTGATTGTTCTATATAATTAAATCATCTTATTTTCTAGGTGGCTATTGACTGGTAATAAGAATTAAGGTGTTTCTGGAAGTAGTGTATCGGCCGTATGATGATGGCTCTGACATGGCTAAGTGCAATTCTAGTTGGAGCTGGGTGCCTTGCATTAGGATACTACTTTGGTAGACATCATCCTCGTTTCTTTCTTTCTGCTACGACACCTAAAGCTAGCGCTACCGGTAGTGGAAGCAAGAAAAATCGTGCCCAAGAGCCCCTTGAGATTGAGAAGCTTGCTGACCTTCTTGAAGATTTCAAAATGGTGCTTTGCCCTTCCTGATCTTTTCTTTTATTTGGATATAGTTACAGCATAAGTTGTTTAAGTATAAGATTGGTACTACTAAAAAAGAGGTGTTAGATTGATAGTCTATGAAGAAATGACATTCTTTTTGTTTGTTTTTTCGAAAGGTGTTGGTAGTGAGGAATGACTTGAAGATGGGCAAAGGAAAGATTGCTGCCCAATGCAGGTACTGGCCCTAAAGATCTAATCATGTAACCGGTCAATCACATTCGCATATGATTTATTCTTCTTCCGTTTCTTGATTGTTCTTTTATATGTTTCTGGGAGTATACCTTTATTAAAAACTTACGAAGATGTTATTAAGTGTCATTTCAGTCCATTCTCAACTTCCCTTCAGGTGCTAATTTGTGCCAAAAACCTACCCTTTTCGTTGTTGCATCCCCTAGACACCTACAAGGCTACAACATGTTTTTATTGCATCATTTAGTAGTATGCCATCCATGAGTTGGTTTGGGTTTTTGGCAACCAAACCACTACCTAGTTCTGTGCTTAAATAGCTGCTGTCTGTGCATGTCCTTGTGGCATATTACCCTGTCCAATCTCTTTGAACTGGCAAATTATGTCAAATTCAAGCACCAGGGATACTTCTATTTCTACTTATTTAATTTTGCTGTTTGTGTTTTTATCTTCTGAGCAGTCATGCAACCTTGGGTCTTTACAAAAAACTCCATAACCGAGCACCAAAAGCATTAAACAGGTGAGTTAAATGTGAATGCTATTCTGTTGATTCAATTTCTCAATTTTATATTGGTATACTACTTACTGCGATTGCGTCTATATGCAGGTGGGAGATGTGTGGGCAGGTTAAAGTAGTTGTCAAAATTGAAAGCGAGGAAGATATGCTAGCTTTACAGGTGAGAATGGTTCAGAAATTTGTAGGTTGAACAGTAGAATATTTTCGGATCTGTTATTTCCATTTATACATACTAGAAGTCACTAGAATATATGCATCAAATCACTTCTTTCGTGAGCGAACAGAAAGTCTCAATTACAGACTTATCTTATCTTACACAATACTCGCAGGTTTATTTTTTAATGTACCATAGTCTTGGACTTTGCATAACCCTTTTTCCATATGTAATGTGTATTGCTGTTGGCCTTATTTGGTTGATTTCTCAGCTCAGTTTTATGGATCCTCTTCAGTAATATTTGAGCCTTGCTTTGATTTATTTGAGCTACTGTTCCTTCAGTTTCTTTTGTAATACCCTGCTGATTAAGAGTCATTGTATCTGTTATGGTTATGCCATTAGATTTAGTACTGGTTTCATTGCCTTTGAAGGTTCAAGTGGCCATATCTAGCGCCAATGGCGTATCCAGGATTTACGTATGGGGTATGCAAAGTTATGTAAGTTGAGTGGTTGAAGTAAGCGAAGAAGGGATAAAAAGAAGATGCAAGTGTTGGAAAATGGATGTAACCAGATTCGAACACCATTACGCCAGTCTTCAAAACCAACACACTACACACCACTTAATCACGCTCAAATTACAACTTGCTGCGTGCAATTATTTGGTCTAAAGCTACTTCAAAAACTTATATAACTAAATATCAGATTGTCAGGGTATGCAACTGCATACCCTTTGTACATGCTGTATGCTGCCCATGTCCGACATGATGGTTACAGTGATACTCCATAGTAATGGATTTCTTGTTGCATTTGTCTTCTCGTGGGTATGGATCTGTCTCTCAATTCGATGCTTAGTGTTCATGTCCAAACTTTGGAATGTGACGGATTTTGTGTCAGGGTAGTTGGTGTCACTTGTCTTGTTTTTTGCCAAATTATGATGTCCAGATAGAAGTTTTGCTCTCTTAATTGACATGCTAGATCTCTACTAAAGATGTAACCATTAGCCGGTGGAATTGAGAGGTATCTCTCATTGGTTTATGATTCCTGATCTGTGGTTTTATACTTTCATACGGTATATGCTGGTTGCCTGGTTCAACATCAGTTTTCGTATTTGTTCTGACACTTTAGAGTGTTAAAGTTGTCCTCTGTTTTTATGTTGAAAAAGCTTATGTTATCTGCTGATTCATGTTCTCATGGTCTCATCTTAGCGCCAAGTTACCTAATTCCTCAAAATTTCTTCTTATCTTTATTCATTATCATCTCAATACATTATTTTTCTGGGAACTACAAAATTGTTTCTGGTCCTGCTTTACCAAGCCTTATCAGATGTTCAGTACATTAATTCTTTTGTTTATGCCTACTTCAATAACAATTATGATTTCATTAGTGATACACTCTATGCCTTGTTATGAGAACCAAGTATGTGATGTGTGGATTATTTTTTTCTCTTTTTCTTTTTGTTCTAAATGAAAGATGTTCTTCTTTTGAACTATTACTTTACCTAGTTAATGCTCATTGTTTGTTTCTTCCAAGCGCAGAAAAGGGCCAAGTCAACTCATATACCCACACATATCGTAATAGACGCCGGAAGAACTCAAATAGCTCCAAGTAAGATGTTAACCAATATACATTATTATTGATCAAGCATGTTACTCCTTATAAAGTTCCTTTTTTTTAATAATGAACATCCAAGTTAATTATTGCTGTTAGGCATATGCTTGTTTGACATTTAGGGAATTAGGGCAAGTCAGAACTCAAAAATTGTATTGATTTGGCTTGTAACCATGGTTAGAACAAGGCTGTACTGACTATACCACCTAGAGTAGCTTATACTTGCATTATAGAAGCTGCTAAGATGAACTTAAACCTGAAAACACAAAGATTTCTGGAACCTCATTATCTATACTTTGTGTCTGTGTCTACTCGTACAAAGGCACGCATATGTGTATGTGGGCGCACCACACAGGGAAAGTAAATAGTTTACAGTTTGATTTTCTGTTTTTGTTGATTGGTAATCACCTGTTTTTAGTGTCTGGAAACAAGAGATAATTAGAGGTAACAAAGTGTTGGGATATGGAGATTTCTGGCTGAGAATCAAACTGTTTACAGTATTATCCTGAGTGTTGAGACCCCATATATGAGTACCTATGTGAGTTGTCCTAATACTGAAGAAGAGGAGAGAAAATGACCAATTGATCTTAGAACGAAACCTCACTTGAGAGCCTATCTTCAAATCTTGTCAAAATTAACAGTAAATGTTTCTGGCTACCTCTTTAAATGCATTTCAATGATGTATTTCTTCTTATCTTGCAGATTCACGAACGGTCATGGCTGTTCTTGGTATGTATCAGCTTTTGTCTCATATGTTTTTTGAATTTTCACCCAATCATTGTCTTATTAATTTATTATGAGTTTTATGACCTCCAAGCCCGTATCTAAATAATATTTTGCTATTGTAGGACCTGCCGACATGGTTGATGATGTTACCGGAGGACTGAAGCTTCTGTAATTGGTTGCCATTTAGGCCCAGATACAAGGACATGATCTAATTATATCTTGGGGAAAGGAACCTGGAACAGCAGGTTCTGCAAATTGACCACGTTGAAAGTACGATCACCAGTCCTTGCTAAATGCTTATTTGGTGCAACACCCCCCGTCCCCCCACCATTCTAGTGATCTTTTGTTGCCTACTTATTTGGTGTTTTGCCGATGGCATGGAGGGTTGTTTTTCCGAAGAAATGAACAGAGAATTCTGTGTAACCTTTGATGATTGTCTGTCTAATTAACTTTTAAGTGATGCTCAAATTGATTGAAGTGTGGAATAGGATTCAGTTACTGCAGAAAGGGTCTTCAGATAAGCTGTTTACGCAGCCCAGCGCTAAATCATCTTATTCTTTGATGAACTATGTTTTAGTCCTGTTATGTTATGCTTTTTTCCCCTGCCATAGAGTTGAGCCTGGCCCGACACGCAAAAAGCCAGCCGTGTGAAGAGTTAGTAGTTAGACACCATGCCATATCATTAAACTCCTATCTAGT

mRNA sequence

AAGCTGATATGGGCTACTTCAAAATTACAAACGGGTCTGGGTCTGTTCTCGGATCCGGATCACTACTGATTTTAGTCTTGGTTTTGCAGTCTCTTCAAAAACCACCATTATTCCTAAAACCACAGTCTTCTCTCTCCTCCTCTTCAGCTGCCCGCAAACATTGAGAAGGGCATGCTGCTCACCGTTTGATCTCCAGGATTTTCTTCACTCTGCAGATTATATTTGACGATGACGATAATTTTTTAGGTGCCATTTTTATTTATTTTTTTCCATTTATCATTTGGATAATATTCGCTGCTGCAAAATTCGGCTTATTCGGCTTGGTGGCTATTGACTGGTAATAAGAATTAAGGTGTTTCTGGAAGTAGTGTATCGGCCGTATGATGATGGCTCTGACATGGCTAAGTGCAATTCTAGTTGGAGCTGGGTGCCTTGCATTAGGATACTACTTTGGTAGACATCATCCTCGTTTCTTTCTTTCTGCTACGACACCTAAAGCTAGCGCTACCGGTAGTGGAAGCAAGAAAAATCGTGCCCAAGAGCCCCTTGAGATTGAGAAGCTTGCTGACCTTCTTGAAGATTTCAAAATGGTGTTGGTAGTGAGGAATGACTTGAAGATGGGCAAAGGAAAGATTGCTGCCCAATGCAGTCATGCAACCTTGGGTCTTTACAAAAAACTCCATAACCGAGCACCAAAAGCATTAAACAGGTGGGAGATGTGTGGGCAGGTTAAAGTAGTTGTCAAAATTGAAAGCGAGGAAGATATGCTAGCTTTACAGAAAAGGGCCAAGTCAACTCATATACCCACACATATCGTAATAGACGCCGGAAGAACTCAAATAGCTCCAAATTCACGAACGGTCATGGCTGTTCTTGGACCTGCCGACATGGTTGATGATGTTACCGGAGGACTGAAGCTTCTGTAATTGGTTGCCATTTAGGCCCAGATACAAGGACATGATCTAATTATATCTTGGGGAAAGGAACCTGGAACAGCAGGTTCTGCAAATTGACCACGTTGAAAGTACGATCACCAGTCCTTGCTAAATGCTTATTTGGTGCAACACCCCCCGTCCCCCCACCATTCTAGTGATCTTTTGTTGCCTACTTATTTGGTGTTTTGCCGATGGCATGGAGGGTTGTTTTTCCGAAGAAATGAACAGAGAATTCTGTGTAACCTTTGATGATTGTCTGTCTAATTAACTTTTAAGTGATGCTCAAATTGATTGAAGTGTGGAATAGGATTCAGTTACTGCAGAAAGGGTCTTCAGATAAGCTGTTTACGCAGCCCAGCGCTAAATCATCTTATTCTTTGATGAACTATGTTTTAGTCCTGTTATGTTATGCTTTTTTCCCCTGCCATAGAGTTGAGCCTGGCCCGACACGCAAAAAGCCAGCCGTGTGAAGAGTTAGTAGTTAGACACCATGCCATATCATTAAACTCCTATCTAGT

Coding sequence (CDS)

ATGATGATGGCTCTGACATGGCTAAGTGCAATTCTAGTTGGAGCTGGGTGCCTTGCATTAGGATACTACTTTGGTAGACATCATCCTCGTTTCTTTCTTTCTGCTACGACACCTAAAGCTAGCGCTACCGGTAGTGGAAGCAAGAAAAATCGTGCCCAAGAGCCCCTTGAGATTGAGAAGCTTGCTGACCTTCTTGAAGATTTCAAAATGGTGTTGGTAGTGAGGAATGACTTGAAGATGGGCAAAGGAAAGATTGCTGCCCAATGCAGTCATGCAACCTTGGGTCTTTACAAAAAACTCCATAACCGAGCACCAAAAGCATTAAACAGGTGGGAGATGTGTGGGCAGGTTAAAGTAGTTGTCAAAATTGAAAGCGAGGAAGATATGCTAGCTTTACAGAAAAGGGCCAAGTCAACTCATATACCCACACATATCGTAATAGACGCCGGAAGAACTCAAATAGCTCCAAATTCACGAACGGTCATGGCTGTTCTTGGACCTGCCGACATGGTTGATGATGTTACCGGAGGACTGAAGCTTCTGTAA

Protein sequence

MMMALTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEKLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVVVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKLL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10300.1Spo10300.1mRNA


Homology
[Close]
BLAST of Spo10300.1 vs. NCBI nr
Match: gi|902221699|gb|KNA18975.1| (hypothetical protein SOVF_064500 [Spinacia oleracea])

HSP 1 Score: 357.5 bits (916), Expect = 1.400e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MMMALTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEK 60
           MMMALTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEK
Sbjct: 1   MMMALTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEK 60

Query: 61  LADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVV 120
           LADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVV
Sbjct: 61  LADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVV 120

Query: 121 VKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKL 180
           VKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKL
Sbjct: 121 VKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 181
[Close]
BLAST of Spo10300.1 vs. NCBI nr
Match: gi|731320994|ref|XP_010671110.1| (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 320.5 bits (820), Expect = 1.900e-84
Identity = 164/182 (90.11%), Postives = 171/182 (93.96%), Query Frame = 1 

		  

Query: 1   MMMALTWLSAILVGAGCLALGYYFGRHHP-RFFLSATTPKASATGSGSKKNRAQEPLEIE 60
           MMMALTWLSAILVGAGCLALGYYFG  HP +FF+SAT+ K S T SGSKK RAQ+PLEIE
Sbjct: 1   MMMALTWLSAILVGAGCLALGYYFGARHPAQFFVSATSSKDSVTSSGSKKKRAQDPLEIE 60

Query: 61  KLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 120
           KLAD+L+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV
Sbjct: 61  KLADILQDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 120

Query: 121 VVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK 180
           VVK ESEE+MLALQ RAKS HIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK
Sbjct: 121 VVKTESEEEMLALQGRAKSVHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK 180

Query: 181 LL 182
           LL
Sbjct: 181 LL 182
[Close]
BLAST of Spo10300.1 vs. NCBI nr
Match: gi|1021034439|gb|KZM92223.1| (hypothetical protein DCAR_020412 [Daucus carota subsp. sativus])

HSP 1 Score: 273.5 bits (698), Expect = 2.700e-70
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 

		  

Query: 2   MMALTWLSAILVGAGCLALGYYFGRHHP---RFFLSATTPKASATGSGSKKNRAQEPLEI 61
           MM +TWLSAILVGAGCLALGY FG  +P   +F   + T  A   G   KK RA+ PLE+
Sbjct: 1   MMDMTWLSAILVGAGCLALGYLFGTKYPGVIKFKAKSATNTAVING---KKTRAKPPLEV 60

Query: 62  EKLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVK 121
           EKLA++LEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK+ +RAPKALNRWEMCGQVK
Sbjct: 61  EKLAEILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKILHRAPKALNRWEMCGQVK 120

Query: 122 VVVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGL 181
           VVVKI+SE+DML LQ+RAKS +IPTHIVIDAGRTQIAPNSRTVMAVLGPA++VDDVTGGL
Sbjct: 121 VVVKIDSEDDMLVLQERAKSLNIPTHIVIDAGRTQIAPNSRTVMAVLGPAELVDDVTGGL 180
[Close]
BLAST of Spo10300.1 vs. NCBI nr
Match: gi|565377239|ref|XP_006355095.1| (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Solanum tuberosum])

HSP 1 Score: 273.1 bits (697), Expect = 3.500e-70
Identity = 137/182 (75.27%), Postives = 155/182 (85.16%), Query Frame = 1 

		  

Query: 2   MMALTWLSAILVGAGCLALGYYFGRHH--PRFFLSATTPKASATGSGSKKNRAQEPLEIE 61
           M+ + WLSA+L+GAGCLALGY  G  H  P F  +  +        G K+  A++PLE+E
Sbjct: 1   MIDMAWLSAMLLGAGCLALGYIIGMRHSSPTFLSNRASGDTETIIDGKKRKGAKQPLEVE 60

Query: 62  KLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 121
           +LAD+LEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV
Sbjct: 61  RLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 120

Query: 122 VVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK 181
           VVKIESE+DML LQ+RAKS ++PTHI IDAGRTQIAPNSRTVMA+LGPADMVD+VTGGLK
Sbjct: 121 VVKIESEDDMLVLQERAKSINLPTHITIDAGRTQIAPNSRTVMAILGPADMVDNVTGGLK 180
[Close]
BLAST of Spo10300.1 vs. NCBI nr
Match: gi|460414691|ref|XP_004252698.1| (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Solanum lycopersicum])

HSP 1 Score: 272.7 bits (696), Expect = 4.600e-70
Identity = 141/182 (77.47%), Postives = 158/182 (86.81%), Query Frame = 1 

		  

Query: 2   MMALTWLSAILVGAGCLALGYYFG-RHHPRFFLSATTPKASATG-SGSKKNRAQEPLEIE 61
           M+ +TWLSA+L+GAGCLALGY  G RH  R FLS      + T   G K+  A++P E+E
Sbjct: 1   MIDMTWLSAMLLGAGCLALGYIIGMRHSSRTFLSNRASGDTETLIDGKKRKGAKQPFEVE 60

Query: 62  KLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 121
           +LA++LEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV
Sbjct: 61  RLAEILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 120

Query: 122 VVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK 181
           VVKIESE+DML LQ+RAKS +IPTHI IDAGRTQIAPNSRTVMA+LGPADMVD+VTGGLK
Sbjct: 121 VVKIESEDDMLVLQERAKSINIPTHITIDAGRTQIAPNSRTVMAILGPADMVDNVTGGLK 180
[Close]
BLAST of Spo10300.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHM0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064500 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 9.900e-96
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MMMALTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEK 60
           MMMALTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEK
Sbjct: 1   MMMALTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEK 60

Query: 61  LADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVV 120
           LADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVV
Sbjct: 61  LADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVV 120

Query: 121 VKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKL 180
           VKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKL
Sbjct: 121 VKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 181
[Close]
BLAST of Spo10300.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSE2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049790 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.300e-84
Identity = 164/182 (90.11%), Postives = 171/182 (93.96%), Query Frame = 1 

		  

Query: 1   MMMALTWLSAILVGAGCLALGYYFGRHHP-RFFLSATTPKASATGSGSKKNRAQEPLEIE 60
           MMMALTWLSAILVGAGCLALGYYFG  HP +FF+SAT+ K S T SGSKK RAQ+PLEIE
Sbjct: 1   MMMALTWLSAILVGAGCLALGYYFGARHPAQFFVSATSSKDSVTSSGSKKKRAQDPLEIE 60

Query: 61  KLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 120
           KLAD+L+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV
Sbjct: 61  KLADILQDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 120

Query: 121 VVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK 180
           VVK ESEE+MLALQ RAKS HIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK
Sbjct: 121 VVKTESEEEMLALQGRAKSVHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK 180

Query: 181 LL 182
           LL
Sbjct: 181 LL 182
[Close]
BLAST of Spo10300.1 vs. UniProtKB/TrEMBL
Match: G5DXA5_SILLA (Peptidyl-tRNA hydrolase II (PTH2) family protein (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.900e-73
Identity = 145/177 (81.92%), Postives = 156/177 (88.14%), Query Frame = 1 

		  

Query: 5   LTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEKLADL 64
           LTWL+A+LVGAGCL LGY  G      FL +T    ++  S SKKNRAQEPLEIEKLAD+
Sbjct: 3   LTWLTALLVGAGCLGLGYLVGARRQARFLVSTQ---ASNKSVSKKNRAQEPLEIEKLADI 62

Query: 65  LEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVVVKIE 124
           +EDFKMVLVVRNDLKMGKGKIAAQCSHATLGL+KKL NRAPKALNRWEMCGQVKVVVK E
Sbjct: 63  IEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLFKKLQNRAPKALNRWEMCGQVKVVVKTE 122

Query: 125 SEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKLL 182
           SEEDMLALQ RAKSTH+PTHI IDAGRTQIAPNSRTVMA+LGPA+MVDDVTGGLKLL
Sbjct: 123 SEEDMLALQGRAKSTHLPTHITIDAGRTQIAPNSRTVMAILGPAEMVDDVTGGLKLL 176
[Close]
BLAST of Spo10300.1 vs. UniProtKB/TrEMBL
Match: G5DXA4_SILLA (Peptidyl-tRNA hydrolase II (PTH2) family protein (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.600e-72
Identity = 144/177 (81.36%), Postives = 156/177 (88.14%), Query Frame = 1 

		  

Query: 5   LTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEKLADL 64
           LTWL+A+LVGAGCL LGY  G      FL +T    ++  S SKKNRAQEPLEIEKLAD+
Sbjct: 3   LTWLTALLVGAGCLGLGYLVGARRQARFLVSTQ---ASNKSVSKKNRAQEPLEIEKLADI 62

Query: 65  LEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVVVKIE 124
           +EDFKMVLVVRNDLKMGKGKIAAQCSHATLGL+KKL NRAPKAL+RWEMCGQVKVVVK E
Sbjct: 63  IEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLFKKLQNRAPKALSRWEMCGQVKVVVKTE 122

Query: 125 SEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKLL 182
           SEEDMLALQ RAKSTH+PTHI IDAGRTQIAPNSRTVMA+LGPA+MVDDVTGGLKLL
Sbjct: 123 SEEDMLALQGRAKSTHLPTHITIDAGRTQIAPNSRTVMAILGPAEMVDDVTGGLKLL 176
[Close]
BLAST of Spo10300.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HP70_SOLCH (Putative peptidyl-tRNA hydrolase 2, mitochondrial-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 8.400e-71
Identity = 139/182 (76.37%), Postives = 155/182 (85.16%), Query Frame = 1 

		  

Query: 2   MMALTWLSAILVGAGCLALGYYFGRHH--PRFFLSATTPKASATGSGSKKNRAQEPLEIE 61
           M+ + WLSAIL+GAGCLALGY  G  H  P F  +  +        G K+  A++PLE+E
Sbjct: 1   MIDMAWLSAILLGAGCLALGYIIGMRHSSPTFLSNRASGVTETIIDGKKRKGAKQPLEVE 60

Query: 62  KLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 121
           +LAD+LEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV
Sbjct: 61  RLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 120

Query: 122 VVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK 181
           VVKIESE+DML LQ+RAKS +IPTHI IDAGRTQIAPNSRTVMA+LGPADMVD+VTGGLK
Sbjct: 121 VVKIESEDDMLVLQERAKSINIPTHITIDAGRTQIAPNSRTVMAILGPADMVDNVTGGLK 180
[Close]
BLAST of Spo10300.1 vs. ExPASy Swiss-Prot
Match: PTH2_HUMAN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.200e-31
Identity = 71/137 (51.82%), Postives = 93/137 (67.88%), Query Frame = 1 

		  

Query: 48  KKNRAQEPLEIEKLADLLED---FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRA 107
           K   ++   + E  A +L D   +KM+LVVRNDLKMGKGK+AAQCSHA +  YK++  R 
Sbjct: 42  KSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRN 101

Query: 108 PKALNRWEMCGQVKVVVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAV 167
           P+ L +WE CGQ KVVVK   EE ++AL   AK   +   ++ DAGRTQIAP S+TV+ +
Sbjct: 102 PEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGI 161

Query: 168 -LGPADMVDDVTGGLKL 181
             GPAD++D VTG LKL
Sbjct: 162 GPGPADLIDKVTGHLKL 178
[Close]
BLAST of Spo10300.1 vs. ExPASy Swiss-Prot
Match: PTH2_BOVIN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.600e-30
Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 1 

		  

Query: 67  DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVVVKIESE 126
           ++KM+LVVRNDLKMGKGK+AAQCSHA +  YK++  R P+ L  WE CGQ KVVVK   E
Sbjct: 64  EYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDE 123

Query: 127 EDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAV-LGPADMVDDVTGGLKL 181
           E ++ L   AK   +   ++ DAGRTQIAP SRTV+ +  GPAD++D VTG LKL
Sbjct: 124 ETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178
[Close]
BLAST of Spo10300.1 vs. ExPASy Swiss-Prot
Match: PTH2_MOUSE (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.700e-29
Identity = 72/173 (41.62%), Postives = 103/173 (59.54%), Query Frame = 1 

		  

Query: 10  AILVGAGC-LALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEKLADLLEDF 69
           ++  G  C + LG+    H   F  ++T+     T +G++ +   E  E          +
Sbjct: 18  SLAAGVACGMCLGWGLRSHLGMFPQNSTSEANRDTETGTEASILGESGE----------Y 77

Query: 70  KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVVVKIESEED 129
           KM+LVVR DLKMGKGK+AAQCSHA +  YK+   R+P+ L  WE CGQ KVVVK   E+ 
Sbjct: 78  KMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDEDT 137

Query: 130 MLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAV-LGPADMVDDVTGGLKL 181
           ++ L   AK+  +   ++ DAGRTQI P SRTV+ +  GP +++D+VTG LKL
Sbjct: 138 LIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180
[Close]
BLAST of Spo10300.1 vs. ExPASy Swiss-Prot
Match: PTH2_DROME (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster GN=CG1307 PE=2 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 2.000e-28
Identity = 73/151 (48.34%), Postives = 100/151 (66.23%), Query Frame = 1 

		  

Query: 35  ATTP--KASATGSGSKKNRAQEPLEIEKLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHA 94
           A TP  + S+  SGS+ + + +         L ++FKMVLVVRNDLKMGKGKIAAQC H 
Sbjct: 42  AATPFSQESSVSSGSEASVSDKGY-----GGLNDNFKMVLVVRNDLKMGKGKIAAQCGHG 101

Query: 95  TLGLYKKLHNRAPKALNRWEMCGQVKVVVKIESEEDMLALQKRAKSTHIPTHIVIDAGRT 154
            +G Y++   R P+ L  WE CG  K+ V++ESE +++A++K A+   + T ++ DAGRT
Sbjct: 102 AVGAYQRAVVRTPRLLRSWENCGCAKIAVRVESEAELMAIKKEAERQQLNTCLIRDAGRT 161

Query: 155 QIAPNSRTVMAVLGPADM--VDDVTGGLKLL 182
           QI  NS+TV+AV GPA    +D VTG LKLL
Sbjct: 162 QIEANSKTVLAV-GPAAAADIDRVTGHLKLL 186
[Close]
BLAST of Spo10300.1 vs. ExPASy Swiss-Prot
Match: PTH2_CAEEL (Probable peptidyl-tRNA hydrolase 2 OS=Caenorhabditis elegans GN=C24G6.8 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.000e-22
Identity = 65/140 (46.43%), Postives = 83/140 (59.29%), Query Frame = 1 

		  

Query: 45  SGSKKNRAQEPL-EIEKLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHN- 104
           S S +N A E +  ++ +A      KMVLV    LKMG GKIAAQ  HATLG+Y++  N 
Sbjct: 179 SSSSENEADEEMGAVQSVAG--RTHKMVLVANMSLKMGTGKIAAQVGHATLGVYRQAMNS 238

Query: 105 -RAPKALNRWEMCGQVKVVVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTV 164
                A+  W   GQVK+VVK +S E ++ L K AK      ++V DAG TQI   SRTV
Sbjct: 239 ENGQNAIAAWTRHGQVKIVVKGQSTEQLMDLCKVAKDAGCYYYLVQDAGYTQIPAGSRTV 298

Query: 165 MAVLGPADMVDDVTGGLKLL 182
           + + G  + VD VTGGLKLL
Sbjct: 299 LGIFGTVEQVDSVTGGLKLL 316
[Close]
BLAST of Spo10300.1 vs. TAIR (Arabidopsis)
Match: AT3G03010.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein)

HSP 1 Score: 239.2 bits (609), Expect = 2.000e-63
Identity = 129/182 (70.88%), Postives = 146/182 (80.22%), Query Frame = 1 

		  

Query: 3   MALTWL-SAILVGAGCLALGYYFG--RHHPRFFLSATTPKASATGSGSKKNRAQEPLEIE 62
           M L WL S +LVGA   ALGYY    R   R FLS+ +    A  SG+KK +++EPLEIE
Sbjct: 1   MDLVWLLSVLLVGA---ALGYYISTLRQTRRIFLSSKSVAIDAGSSGNKKTKSKEPLEIE 60

Query: 63  KLADLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKV 122
           KLAD  ++FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKALNRWE C Q KV
Sbjct: 61  KLADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPKV 120

Query: 123 VVKIESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLK 182
           VVKIESEE+ML LQ+RAK+  +PTHI IDAG+TQIAPNSRTVMA+LGP D VD+VTGGLK
Sbjct: 121 VVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAILGPVDNVDEVTGGLK 179
[Close]
BLAST of Spo10300.1 vs. TAIR (Arabidopsis)
Match: AT5G16870.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein)

HSP 1 Score: 228.0 bits (580), Expect = 4.600e-60
Identity = 122/179 (68.16%), Postives = 139/179 (77.65%), Query Frame = 1 

		  

Query: 3   MALTWLSAILVGAGCLALGYYFGRHHPRFFLSATTPKASATGSGSKKNRAQEPLEIEKLA 62
           M LTWLSA++VGA   ALGY  G    +       P  +A     K   ++ PLEIEKLA
Sbjct: 1   MDLTWLSALIVGA---ALGYCIGTRRSK-------PVVAAVDKDIKTQSSKSPLEIEKLA 60

Query: 63  DLLEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVVVK 122
           D+L+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKAL+ WE C Q KVVVK
Sbjct: 61  DILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQPKVVVK 120

Query: 123 IESEEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAVLGPADMVDDVTGGLKLL 182
           IE E++ML LQ+RAKS  +PTHI IDAGRTQIAPNSRTVMA+LGP ++VD+VTGGLKLL
Sbjct: 121 IEDEDEMLELQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGGLKLL 169
[Close]
BLAST of Spo10300.1 vs. TAIR (Arabidopsis)
Match: AT4G32900.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.800e-25
Identity = 58/117 (49.57%), Postives = 81/117 (69.23%), Query Frame = 1 

		  

Query: 66  EDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHNRAPKALNRWEMCGQVKVVVKIES 125
           ++ KMVLVVR DLKM  GKIA+QC+HA  G+Y +L       L RWE  GQ K+VV  ++
Sbjct: 77  QELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKN 136

Query: 126 EEDMLALQKRAKSTHIPTHIVIDAGRTQIAPNSRTVMAV-LGPADMVDDVTGGLKLL 182
           +++M  + + A+S  +PT +V DAGRT++A  SRTV+AV  GP ++VD +TG L LL
Sbjct: 137 QQEMNKITEAAESVGLPTFVVADAGRTEVAAGSRTVLAVGPGPKELVDSITGRLALL 193
The following BLAST results are available for this feature:
BLAST of Spo10300.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902221699|gb|KNA18975.1|1.4e-95100.hypothetical protein SOVF_0645... [more]
gi|731320994|ref|XP_010671110.1|1.9e-8490.1PREDICTED: peptidyl-tRNA hydro... [more]
gi|1021034439|gb|KZM92223.1|2.7e-7078.1hypothetical protein DCAR_0204... [more]
gi|565377239|ref|XP_006355095.1|3.5e-7075.2PREDICTED: peptidyl-tRNA hydro... [more]
gi|460414691|ref|XP_004252698.1|4.6e-7077.4PREDICTED: peptidyl-tRNA hydro... [more]
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BLAST of Spo10300.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RHM0_SPIOL9.9e-96100.Uncharacterized protein OS=Spi... [more]
A0A0J8CSE2_BETVU1.3e-8490.1Uncharacterized protein OS=Bet... [more]
G5DXA5_SILLA6.9e-7381.9Peptidyl-tRNA hydrolase II (PT... [more]
G5DXA4_SILLA2.6e-7281.3Peptidyl-tRNA hydrolase II (PT... [more]
A0A0V0HP70_SOLCH8.4e-7176.3Putative peptidyl-tRNA hydrola... [more]
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BLAST of Spo10300.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PTH2_HUMAN4.2e-3151.8Peptidyl-tRNA hydrolase 2, mit... [more]
PTH2_BOVIN1.6e-3057.3Peptidyl-tRNA hydrolase 2, mit... [more]
PTH2_MOUSE6.7e-2941.6Peptidyl-tRNA hydrolase 2, mit... [more]
PTH2_DROME2.0e-2848.3Probable peptidyl-tRNA hydrola... [more]
PTH2_CAEEL8.0e-2246.4Probable peptidyl-tRNA hydrola... [more]
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BLAST of Spo10300.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G03010.12.0e-6370.8Peptidyl-tRNA hydrolase II (PT... [more]
AT5G16870.14.6e-6068.1Peptidyl-tRNA hydrolase II (PT... [more]
AT4G32900.22.8e-2549.5Peptidyl-tRNA hydrolase II (PT... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 69..181
score: 1.7
IPR002833Peptidyl-tRNA hydrolase, PTH2TIGRFAMsTIGR00283TIGR00283coord: 69..181
score: 3.1
IPR023476Peptidyl-tRNA hydrolase II domainGENE3D3.40.1490.10coord: 65..181
score: 3.0
IPR023476Peptidyl-tRNA hydrolase II domainunknownSSF102462Peptidyl-tRNA hydrolase IIcoord: 67..181
score: 3.14
NoneNo IPR availablePANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 1..181
score: 1.0
NoneNo IPR availablePANTHERPTHR12649:SF11PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIALcoord: 1..181
score: 1.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0022402 cell cycle process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0071586 CAAX-box protein processing
biological_process GO:0006334 nucleosome assembly
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0043247 telomere maintenance in response to DNA damage
biological_process GO:0016444 somatic cell DNA recombination
biological_process GO:0006259 DNA metabolic process
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0009845 seed germination
biological_process GO:0010162 seed dormancy process
biological_process GO:0010332 response to gamma radiation
biological_process GO:0050826 response to freezing
biological_process GO:0032204 regulation of telomere maintenance
biological_process GO:0009909 regulation of flower development
biological_process GO:0051276 chromosome organization
biological_process GO:0006996 organelle organization
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009636 response to toxic substance
biological_process GO:0009733 response to auxin
biological_process GO:0050794 regulation of cellular process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0006333 chromatin assembly or disassembly
biological_process GO:0009407 toxin catabolic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0033043 regulation of organelle organization
biological_process GO:0010731 protein glutathionylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0006810 transport
biological_process GO:0030001 metal ion transport
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0043687 post-translational protein modification
biological_process GO:0006260 DNA replication
biological_process GO:0016049 cell growth
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0016043 cellular component organization
biological_process GO:0048869 cellular developmental process
biological_process GO:0060560 developmental growth involved in morphogenesis
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0006508 proteolysis
biological_process GO:0001510 RNA methylation
biological_process GO:0010015 root morphogenesis
biological_process GO:0051026 chiasma assembly
biological_process GO:0009058 biosynthetic process
biological_process GO:0009553 embryo sac development
biological_process GO:0048232 male gamete generation
biological_process GO:0009555 pollen development
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009640 photomorphogenesis
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006312 mitotic recombination
biological_process GO:0019915 lipid storage
biological_process GO:0009933 meristem structural organization
biological_process GO:0042138 meiotic DNA double-strand break formation
biological_process GO:0007141 male meiosis I
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0000790 nuclear chromatin
cellular_component GO:0005622 intracellular
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0000786 nucleosome
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0005634 nucleus
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0017069 snRNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0045174 glutathione dehydrogenase (ascorbate) activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0005488 binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo011830.82Barchart | Table
Spo108170.79Barchart | Table
Spo030060.79Barchart | Table
Spo067110.77Barchart | Table
Spo187840.77Barchart | Table
Spo081980.77Barchart | Table
Spo126990.77Barchart | Table
Spo182200.76Barchart | Table
Spo085130.76Barchart | Table
Spo251750.75Barchart | Table
Spo165300.74Barchart | Table
Spo064970.74Barchart | Table
Spo241280.73Barchart | Table
Spo032130.73Barchart | Table
Spo230920.72Barchart | Table
Spo108200.72Barchart | Table
Spo093070.72Barchart | Table
Spo043870.72Barchart | Table
Spo242250.72Barchart | Table
Spo062770.72Barchart | Table
Spo230670.72Barchart | Table
Spo212430.72Barchart | Table
Spo249360.71Barchart | Table
Spo250030.71Barchart | Table
Spo005380.71Barchart | Table
Spo087120.71Barchart | Table
Spo000640.70Barchart | Table
Spo217160.70Barchart | Table
Spo150920.70Barchart | Table
Spo202350.69Barchart | Table
Spo157900.69Barchart | Table
Spo178840.69Barchart | Table
Spo073150.69Barchart | Table
Spo127350.69Barchart | Table
Spo019670.69Barchart | Table
Spo007540.69Barchart | Table
Spo030080.68Barchart | Table
Spo049590.68Barchart | Table
Spo063410.68Barchart | Table
Spo101630.68Barchart | Table
Spo158820.68Barchart | Table
Spo196990.68Barchart | Table
Spo244160.68Barchart | Table
Spo255030.68Barchart | Table
Spo156080.67Barchart | Table
Spo143780.67Barchart | Table
Spo134280.67Barchart | Table
Spo084970.67Barchart | Table
Spo079690.67Barchart | Table
Spo238740.67Barchart | Table
Spo239210.67Barchart | Table
Spo063800.67Barchart | Table
Spo048260.67Barchart | Table
Spo257330.67Barchart | Table
Spo249160.67Barchart | Table
Spo249370.67Barchart | Table
Spo157990.67Barchart | Table
Spo165590.67Barchart | Table
Spo162530.66Barchart | Table
Spo077820.66Barchart | Table
Spo070200.66Barchart | Table
Spo004440.66Barchart | Table
Spo168350.66Barchart | Table
Spo104500.66Barchart | Table
Spo244700.66Barchart | Table
Spo040370.66Barchart | Table
Spo244200.65Barchart | Table
Spo138770.65Barchart | Table
Spo210990.65Barchart | Table
Spo016920.65Barchart | Table
Spo232980.65Barchart | Table