Spo10381 (gene)

Overview
NameSpo10381
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTranscription elongation factor-like protein
Locationchr4 : 4580922 .. 4588322 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGAGAGACACGACACGACCATATGGTCAGTTCGTACGAAGTATCGATTGCCAGTCACCTCTCCCTACGCTACTTCTTGATTTGGTATTTGGAAAATTTTCTATTCCCATATTTTCCTCTAACCCTAATTTTGTTCTCCCCTTTCTGCAATATTTTAATTTTTATCGACTAATCTGGCAGACCGTAACAAACCCTTGATCGAAAAGCAACCCGAGTTTCATCTTTTCTAGGTATATTCTTCCTTCTCGTATGATCTTTTTCTAGGATCTAATCACCTGTTTTTGCAGCTTTGAAGTCGAATTTCATTTCTAGGGTTTACTATTCTATGAATTGTGGTGCAGTTTTTGATTAAAATCTTGGTAGAATTAACTTATACGTTCTATTTGGTGGTACTTTTTATGTAATTTGTTGATTCTTCATGTAATTTGAGGAATTTTGTTTTGGGTATATTTTAGTTTTGAATTTTGGATTGATGTAATTTTTTGGATTGGGATTTCTATTGAAAAGCTAGTCATAGAAAGGTAAAAAAATTGTACTCAATTAAGTTGGTTACAAAGTAACTTACTTTAAGGTTTAGAGAACTATATGGTGTGCGAGAATGTTCTAGTTCTGTCTTTCTTATGAAAGAAGTTTTTGGAATTACATCTGATATTGGAATTTTTATTGCATTGATTGGTTGCCGGATTTCTACTGTATGTTGTTTTGTTTGTTAATTTGTGCTAGCTCTCACAAGCGTGTAGTAGAGTAGGTAGAAGTTCTTTTATCTTCAGCAATAGAGGAATTTTAAAGAGATCACCGGGGCTGTGAGTTTTTGTGCTTGTCTTTAATCCCTTAATTACAAGAAGTCTCGTTATAACACTGTTGGATTATGAACAATCTAATAGTCCTGCGGAATAAACCCTAATACAAGATCGCATATAAGAATTTAATCAACCAATTAATTAGTGTTGAATACATACAATCTGTGACACATGCCTCTTCGATTACCTGGTTTACCATAGGACCTTGAGATATTAATGTCTTTATATCTTATACTTCAAACTTTTCGATCCACGATTGACTGGTTTTTTCTCGTAGGATAGTGACTCATCTAACTCGATTGTTTCGGGTTGAAGTACATGGAAAGTGTCTGGCACGTATCTCTTGAGTTATGAGTTATGACTTAAGACCCATTCATTTTGAAATACTACCTGCTGATAAAATGCCGCTTAAGCATTGTTCACTTCATTCTGATTTATCCTTCTCTCAATCCATCCCTCCCCTCTCGTTCCTTTCCTTTTCATATATTTAATTTCTATTTTTTGATGTATAACTTCAAGAAGCAAGTCATTTGTTGTGTAAGTAAATTTGGTAGACACCTAGCAATTTGGCTATATTTATACATTGGTCTCGAAGAAATTAAGAGATTCTTTTGAACACAGGTTATCTGTTGTACTCGTCGTAGTAACAAAGGTAATTTGTTTTGGTTTAGAGTAGGAAAGGAAATTTGGTTTGGTTCGGAGTGTTCTTATGATGTAGTTAGTTATGTTTCCCTTGTTTTGGGGATCATTTCATGAGTAAAAATCCAAAGAACTTTGTACTTGGTCGAATTGTAACAGATTGTGTGGTTTTATATGTTATTTGGAGAAGAAAGGCAGTGAAGGAAGGATAGTAAGAGAAGGAATGAAATGAGACGACCAAAGTTAGAATGACAAACATTTGGTTTAGTTAGTAGGATTTCGAGGCATATGTTATTTGATTAGCAGTAAGCTATTGTGGGGGAGATTGACGTTGAAAGGCCAAGTTGTTGGTATTGGATGGCTGTCTAATGTTTCAATTAGCGTGATGATGACAAGCCATGTGTAGCTGTTGGAGAAAAAATGCAACACAGGAGTGTTCTTAGGTTGTTGGAATTCGTATAGCTTCAAGCTGGCACCTTTTTACATTACTGCTAAGTGTTCCTCTAATATGGGGAAATCCATGGGTTTTGTGACTTGTGAGTGATAGTAGATCTGGAAAGATTTTAGGAGGAGTTGGGTTAGGCTTTTGGAGGACATTGACTTATTTCTTTTTTGGAATAATTGTTTTGCTTCTCTTATAATGTCTATTAGGTTTTTGGAGCACATTGCCTAATAACAGGGTCTTCAAATTGGGCTTTGCTTTTTTTTGCCTTGTGATGAGAACTTACTGAGACCTTAGAAATTAGGCTCGGATCTATGAGTTTATCTGATTAAAGTTTTGTACTTTGTTCCTAATCCTTAACTTTTAATGTTAATCAATCAGCTATGTACGCAACCTTAGCACAATCTCATCGAAGTGTTTCATTCAATCTCCAATTTTGCCGTTGTAAGATGTAACTATTTCATGGAGCTTTAATTTCAAAATGAAACTCATCCTCCCAAATGGTTGTGATTTATGGGAAATGTTGTTGAATGACATTTTTGTTGAAGTGAAAAAACAACATTATCTTTCCGCTGCTTTGAAAATGTCTAATTTTCAGTTAGGTGCTTTAATTTAGGTATACCTTTCTTACATAAAATTTCTTATCGTATATCAAGGTTATTCATAGGCGATTCAGGCACCAACCTTTATAGAAGTAAGGCATGCCGAGTGGAGCAGGTGGATCTCTTTTTTTTTTTGGGAAAATGGCTTTAGATGGGACAAAATGTGAAAGTGACATACTCCATGTGTTGGGAGTTTATTTATTTTCTGAAGGTCATACTAGGTTTGCTAGAAATTTGCTGATAGGTGAATTCCGAATTGAGTTTTAAGAGCAAGTTCGCTATACAATTTGAAAGGGGAAATACGAAATACCAAATTTGAAAGTGTCATACTCTGATACTCTATATACTAAGGTTCTTTTTTTTTAATTATTATTTTATTTCTTTTTTAAATTTTATTTTTTGAAGGCCATAGTCGGTTTGCTAGAAATTTGCTGATGGGTGAATTCCGAATTGGGATTTATTGATCCAACTTGTGCAACTCCACCTGTTTGATACTGTTTTAAGAGCAAGCGTACCATATATTTTATGAACAAGGTTGATTATATTGTAACAAAAGGATGATTGTTTATCAGTGACTACTTATCATTTATCAGTGTAATTGATGTAAAGGTACATCAGTGTTACACTTAGGCTGATAGGCTGACAACTATAAAAGAATGACATTTTGGGATAGAATTCTTAGTAAAGGGAAATGCATTAGGATCATAGTGGCAATTATTGAGGATAAGATGAAGGAGAAATGGAAGAGTCGACTTTGGTAATTTGAACATAGTCAAATGTCAACTTCAGGATGCACCAATCCCACGGATGGAGATTTGAGACGGGGATTTTATTAAAGGCCAGGCACTCAGGCTTTCAAAGGTAGCATGTATGGAAGGTGTAAGGGGAAAAAAACAAGGGTGTTCAGGAATATATTACATTGGATAGGATTAGTGGAGGATGATTATTCATGTAAGAAACTCATGGAGATGACATCTTGGTTTGTATAGCAATCCCAACCCTTTGGGATTAAGTCTCTGATATTGTTGTTGGTAGCATGTGGTTATCAAACCTCTGTGCAATGACAATATGCAAATCCCATTTCTGTAGTTCTGCATGCCTGGTGGTCCCTGTTCCAGACTCCCAGTCTATTAGTGTCATACTATGTCATGTCTTAAGCTTTTCTGATAACTACTTGAACTATTATTCCTGTATAATTAGGTACATAATTAGGTATTTTACAGAGTAAGTCTTCCCCCTATCCACGTTTTATAAATGTTCCGTTTCCATATAGCATTTTGCAGTTATTGCCTTTTGGCTTGTTGTAGGGTTATATTTTATGATTGGCCTGGTACATATTCTTCATATACGTGTTATCAGAGCTGCTATTCACTCAGTTTAATGGTTAGCATCTTTATGAGATTCAAGGCGCACAAAATTTTCAGCTAAAGGGTTTGAAGGTGTTAGAATATTCTCCAGGACTTGTTGGATTTATTGTTTAGAATATGGTCGAGTTTTGGCTCATATGTCTAGTTTCGAGCTCATGCTGTTCAGTTCTGATTTTGTTTTGAGTTGTTAAAATGGTGTTATGCTGACTTTTTCTGTTGTCCAGTTGCTCATGTACTCTTGTTATTTGTCTTGTCTTATCCTATCTTTTTCCTTATGGTTACCTTGTTATGGTTGTGTTCAAGTGTTGGTAGCCACGCGATATGGGGAAGAGAAAGTCAAGAGCTAAGCCCCCTCCAAAGAAGAGCCTCAAACTTGATACTGTTTTCAGCTGTCCTTTCTGCAATCACGGGACCAGTGTGGAATGCCGCATGTAAGTATACTCTGCTTCCTTGAACGTGTTTTTCTACTTGAGTCAAGAGTCCTAGGCTCATGAATTTTCCTTTTGAGATGTGCTTTTGTCCTTATTGCAAGACTGCTGGCTTGAAGGGGAAGTTAGATCTGCTGATTAAGTTTGGTTCAATGAGGTATAAGTTGCATTAGGTTACACTTGATGACACTGTATTCTTTGTTTGAGTTCGAAATGATATCACCATGGAAAAAAACTCGTCCGTTCCGTTACAGAACGGCCGATTTGTAACGGGTTTGAGATCCACCGTTCCGAGAAACTCCGTTATAGCGCTGGGAGTTAGAATTCACACCAAACTCGCCGCGACGGCGTTCCGTAACGGTAGAACGCTGTTCTGTAACGCTTTTTATATAAGAACGCCCGTTATTTCTGGAAAAAGGTGAAGGAAGAAGGAAGAAAAAGAGGCTCAAAATTAATTAGATCTAATTTAAACCGAAAATTTAAATCTTACCTTGTCTTTAGAACTCAAATTCGATCAAAAGCCCTCAATTAATTTCATTAAAATACTTTTTTTTGAACTCTAAATTGAATCCCAGTTTCATAGAAACCCTAATATGCATGTGACTATATGGGATGTAATTGACGGCCACTACTTTGCCGCTCAAAGGCAGAGAACGCCGGCGACAGATATTCGACCATCTCTTATCTGCTGATGTCCTGTGGTGGTGAGAATTTCTCAGATGAGTTCTTCGCTTCTGCCATTGATATGTCGATCTTTTCTTCTTCTCTCTCTTCTTCTGTTTTTTTTTTCAATAGTGTGATTGAGCCTTTTTCTTTTATCTTTTCTTTTTTCCCTTTTTTTTAATTATTATAAAACCTTTCTTTTAGAGTAATCTCTAATACTCTTTTACGATGTACTTTTTTAAAACCTTGCTTTCTCCAACTCTTTAACCGTTAGTCCATCTTTCCAGATTTCTTAAATTTATTTTTCTCCAAACAACAGTTGGTTTTAAAAAATATGAGTTTTCCCTTGCTAAATATTTTTTTTGACGTTAACTATTTAATTAATGAGCCTAAGAGTGAATAATAAAACTACAAGCTGCAAATAAATTAATAAATATATTTAAAATATATTTGTAAATAGTCCAAATAGTGTATTTATAATACTTATGTACACAATATTAAGAACATAAAACAAACTTAAATTTCCACTTACGTGATTATTTCTTAAAAATTCACTCCGGGATGGCCGCGAAACGTTCTATTTAACCGTTACAAGCCGTTCCCGCGACAACGCGACCGTTACCGCAAACGCGACTGCGAACGCGTTTTTTTCCATGGATATCACCTTTTTTTTATAAGTAACATAAGGATAGAAATGTAGAAGTGCCAACGGGGTGACACCATATACAACAGGAGAGCTATGCTCACAAGCTAAATCTTGACTCCAAAATTGAAGCCTCAGAAATTGGAACTTGGAACTTTGAAAATTCATTGGTTTCTTCCTTTTCAAGTCCACCACCAAATCGCCTGAACCACTATTCAAACTTTGGCAAACCAATCTTTTTTTGTTCTTTTCCAAGTAACAAGCACATCCTTTATGAACAAGGTTGAAATGATATCACTTTAAAAGTTACTAGAAGCTCCGCCATGAAGAAATAACGAGTCTATTGTTTGAAACTTGAGTTCTGTATACTTTAGGGAAGTGAATAATTAATTTTGGATGCCCTTGCCTAGAAAGCGGAGAAAGAGCAAATAATGAACGTGACAGAGCTATGTGATCATTGCCATGAGGCCCATGATTATATGTCTCTTTTCTTTGTTTGGCTTTGATCATACTGTTCTCATGAAGAATATGCCATTTAGAAGCAGGGTCATCGGGCTAAATATTTTGCTGACCTTACCTGATTTCCAGTGATATGAAGAACTTGATTGGTGAAGCCATATGTAGGATATGCCAAGAGAACTTCAGCACTACAGTTACAGGTACATTTCTTAGCCTTACTAGTGAACCATCAACTAGTATTAGCATGTTTGCCTGGCTTCACAAACTGTGTTACACATGAGTTTTTAATATAAACTACTACATATGCACCATTAACCGAAGTGGAAATTTTTTCTTATCGTTGGGTTCATTATGAATTGATGATGATGACCAAGGAATTAAATCAGCATGTGGTCTTAATCCTCAACTATTCTTTTTCTGTATATGTTGGCAGGTTATCAGATTGTTTTTATTCTTCCAACTGTTATGCATGAATATTACCATCCATTTCACCGAAGCAGTGAATTTTGTTTGTGGGCTGATTTTATTGTTGTCAAATTGCATAAAAGAGCTGGTGCTAAACTGCTAATGCTATTAATATCGAATTTCAGTTTCATTTCTTGTTTACTACGGAGTAGTATCTTCTTTGTATGTTTTGTTAAGAAATTTAGCTGATATGTTTCTTTTTCTCCCCTCCCTTGGGTGGTGTCTACAGCTCTGACGGAAGCAATTGACATGTAAGTCCGACACTCTGACTTATCCAAGATCTTGTGAGTTCTACTGTTGTATTACGTTCCCTTTTGTTTACATTACTTTAAAATTTACAGATACAGCGAGTGGATTGATGAGTGTGAGCGAGTCAATACCGTGGAAGATGATGCCGAATGATAAGATAATGATGGGCAGGAAGGTTGTTGTTGCTCTGTGCAAATGAAATAATCATCTCATGCCCATCTTTTATTCGATGTATGTGCTCGATCCTTACTACCTAGTTGAACCATCTGTCTCAAACTAATCAAAGGTGGACTTCTGGATATGTATGTAACTATGTATTGTTGAGTGACAAGGGTAGATCTTAGGTGCGCAACTGGTTTGTTCTTGTAAGTTGTAATATATGTCGTCTCGTTAGTTTGTTTTCTTAATGTAATGCCATAATAAGACTGGTCAGTCAAGGTTATTCTGAAATCTGAACTTGGTTAGTCCTATTTTCTCCTGTGCTATTTTGGTAGTTAATTTTAATTGCTCTTCCAAATTCGAGTTTTATGTATGTAAAATAAAAGAGTGATGTCGTGGGAGGTGGTAAAATATGTGGTGTAGAACATCACAAACCACCTAAATTCCAATACTCACACAGTATTGATTCAATCGAGCTTTACCC

mRNA sequence

CAAGAGAGACACGACACGACCATATGGTCAGTTCGTACGAAGTATCGATTGCCAGTCACCTCTCCCTACGCTACTTCTTGATTTGACCGTAACAAACCCTTGATCGAAAAGCAACCCGAGTTTCATCTTTTCTAGTGTTGGTAGCCACGCGATATGGGGAAGAGAAAGTCAAGAGCTAAGCCCCCTCCAAAGAAGAGCCTCAAACTTGATACTGTTTTCAGCTGTCCTTTCTGCAATCACGGGACCAGTGTGGAATGCCGCATTGATATGAAGAACTTGATTGGTGAAGCCATATGTAGGATATGCCAAGAGAACTTCAGCACTACAGTTACAGCTCTGACGGAAGCAATTGACATATACAGCGAGTGGATTGATGAGTGTGAGCGAGTCAATACCGTGGAAGATGATGCCGAATGATAAGATAATGATGGGCAGGAAGGTTGTTGTTGCTCTGTGCAAATGAAATAATCATCTCATGCCCATCTTTTATTCGATGTATGTGCTCGATCCTTACTACCTAGTTGAACCATCTGTCTCAAACTAATCAAAGGTGGACTTCTGGATATGTATGTAACTATGTATTGTTGAGTGACAAGGGTAGATCTTAGGTGCGCAACTGGTTTGTTCTTGTAAGTTGTAATATATGTCGTCTCGTTAGTTTGTTTTCTTAATGTAATGCCATAATAAGACTGGTCAGTCAAGGTTATTCTGAAATCTGAACTTGGTTAGTCCTATTTTCTCCTGTGCTATTTTGGTAGTTAATTTTAATTGCTCTTCCAAATTCGAGTTTTATGTATGTAAAATAAAAGAGTGATGTCGTGGGAGGTGGTAAAATATGTGGTGTAGAACATCACAAACCACCTAAATTCCAATACTCACACAGTATTGATTCAATCGAGCTTTACCC

Coding sequence (CDS)

ATGGGGAAGAGAAAGTCAAGAGCTAAGCCCCCTCCAAAGAAGAGCCTCAAACTTGATACTGTTTTCAGCTGTCCTTTCTGCAATCACGGGACCAGTGTGGAATGCCGCATTGATATGAAGAACTTGATTGGTGAAGCCATATGTAGGATATGCCAAGAGAACTTCAGCACTACAGTTACAGCTCTGACGGAAGCAATTGACATATACAGCGAGTGGATTGATGAGTGTGAGCGAGTCAATACCGTGGAAGATGATGCCGAATGA

Protein sequence

MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVTALTEAIDIYSEWIDECERVNTVEDDAE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10381.1Spo10381.1mRNA


Homology
[Close]
BLAST of Spo10381.1 vs. NCBI nr
Match: gi|902182850|gb|KNA09999.1| (hypothetical protein SOVF_148400 [Spinacia oleracea])

HSP 1 Score: 182.6 bits (462), Expect = 3.000e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVT 60
          MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVT
Sbjct: 1  MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVT 60

Query: 61 ALTEAIDIYSEWIDECERVNTVEDDAE 88
          ALTEAIDIYSEWIDECERVNTVEDDAE
Sbjct: 61 ALTEAIDIYSEWIDECERVNTVEDDAE 87
[Close]
BLAST of Spo10381.1 vs. NCBI nr
Match: gi|731350200|ref|XP_010686384.1| (PREDICTED: transcription elongation factor 1 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 169.5 bits (428), Expect = 2.600e-39
Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVT 60
          MGKRKSRAKP  KKS+KLDTVFSCPFCNHGTSVECRIDMKNLIGEA CRICQENFSTT+T
Sbjct: 1  MGKRKSRAKPAAKKSIKLDTVFSCPFCNHGTSVECRIDMKNLIGEASCRICQENFSTTIT 60

Query: 61 ALTEAIDIYSEWIDECERVNTVEDDAE 88
          ALTE IDIYSEWIDECERVNTVEDD E
Sbjct: 61 ALTEPIDIYSEWIDECERVNTVEDDGE 87
[Close]
BLAST of Spo10381.1 vs. NCBI nr
Match: gi|1009161897|ref|XP_015899142.1| (PREDICTED: transcription elongation factor 1 homolog [Ziziphus jujuba])

HSP 1 Score: 167.9 bits (424), Expect = 7.700e-39
Identity = 79/86 (91.86%), Postives = 84/86 (97.67%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKSRAKPPPKK + KLDTVFSCPFCNHGTSVECRIDMKNLIGEA+CRICQE+FSTT+
Sbjct: 1  MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCRICQESFSTTI 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDD 86
          TALTEAIDIYSEWIDECERVNT+EDD
Sbjct: 61 TALTEAIDIYSEWIDECERVNTLEDD 86
[Close]
BLAST of Spo10381.1 vs. NCBI nr
Match: gi|449457009|ref|XP_004146241.1| (PREDICTED: transcription elongation factor 1 homolog [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 8.500e-38
Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKSRAKPPPKK + KLDTVFSCPFCNHGTSVECRIDMKNLIGEA CRICQE+FSTT+
Sbjct: 1  MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEASCRICQESFSTTI 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDDA 87
          TAL+EAIDIYSEWIDECERVN +EDDA
Sbjct: 61 TALSEAIDIYSEWIDECERVNNLEDDA 87
[Close]
BLAST of Spo10381.1 vs. NCBI nr
Match: gi|976910235|gb|KVH96985.1| (Transcription elongation factor 1 [Cynara cardunculus var. scolymus])

HSP 1 Score: 162.9 bits (411), Expect = 2.500e-37
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKSRAKPPPKK + KLDTVFSCPFCNHGTSVECRIDMKNLIGEA CRICQENFSTT+
Sbjct: 1  MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEASCRICQENFSTTI 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDD 86
          TALTE IDIYSEWIDECERVN ++DD
Sbjct: 61 TALTEPIDIYSEWIDECERVNALDDD 86
[Close]
BLAST of Spo10381.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRV1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148400 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.100e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVT 60
          MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVT
Sbjct: 1  MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVT 60

Query: 61 ALTEAIDIYSEWIDECERVNTVEDDAE 88
          ALTEAIDIYSEWIDECERVNTVEDDAE
Sbjct: 61 ALTEAIDIYSEWIDECERVNTVEDDAE 87
[Close]
BLAST of Spo10381.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSS9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182360 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.800e-39
Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSLKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTVT 60
          MGKRKSRAKP  KKS+KLDTVFSCPFCNHGTSVECRIDMKNLIGEA CRICQENFSTT+T
Sbjct: 1  MGKRKSRAKPAAKKSIKLDTVFSCPFCNHGTSVECRIDMKNLIGEASCRICQENFSTTIT 60

Query: 61 ALTEAIDIYSEWIDECERVNTVEDDAE 88
          ALTE IDIYSEWIDECERVNTVEDD E
Sbjct: 61 ALTEPIDIYSEWIDECERVNTVEDDGE 87
[Close]
BLAST of Spo10381.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LAG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236590 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 5.900e-38
Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKSRAKPPPKK + KLDTVFSCPFCNHGTSVECRIDMKNLIGEA CRICQE+FSTT+
Sbjct: 1  MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEASCRICQESFSTTI 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDDA 87
          TAL+EAIDIYSEWIDECERVN +EDDA
Sbjct: 61 TALSEAIDIYSEWIDECERVNNLEDDA 87
[Close]
BLAST of Spo10381.1 vs. UniProtKB/TrEMBL
Match: A0A118JYE8_CYNCS (Transcription elongation factor 1 OS=Cynara cardunculus var. scolymus GN=Ccrd_000924 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.700e-37
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKSRAKPPPKK + KLDTVFSCPFCNHGTSVECRIDMKNLIGEA CRICQENFSTT+
Sbjct: 1  MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEASCRICQENFSTTI 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDD 86
          TALTE IDIYSEWIDECERVN ++DD
Sbjct: 61 TALTEPIDIYSEWIDECERVNALDDD 86
[Close]
BLAST of Spo10381.1 vs. UniProtKB/TrEMBL
Match: A0A059CCT8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00579 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.700e-37
Identity = 77/87 (88.51%), Postives = 84/87 (96.55%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKSRAKPPPKK + KLDTVFSCPFCNHGTSVECRIDMKNLIGEAIC ICQE+FST++
Sbjct: 1  MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICGICQESFSTSI 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDDA 87
          TALTEAIDIYSEWIDECERVNT+E++A
Sbjct: 61 TALTEAIDIYSEWIDECERVNTLEEEA 87
[Close]
BLAST of Spo10381.1 vs. ExPASy Swiss-Prot
Match: ELOF1_ORYSJ (Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica GN=Os07g0631100 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.300e-38
Identity = 77/86 (89.53%), Postives = 79/86 (91.86%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKS AKPPPKK + KLDTVFSCPFCNHG+SVECRIDMKNLIGEA CRICQENFSTTV
Sbjct: 1  MGKRKSAAKPPPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTV 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDD 86
           ALTE IDIYSEWIDECERVN VEDD
Sbjct: 61 NALTEPIDIYSEWIDECERVNNVEDD 86
[Close]
BLAST of Spo10381.1 vs. ExPASy Swiss-Prot
Match: ELOF1_ARATH (Transcription elongation factor 1 homolog OS=Arabidopsis thaliana GN=At5g46030 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.100e-36
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKSRAKP P K + KLDT+FSCPFCNHG+SVEC IDMK+LIG+A CRIC+E+FSTT+
Sbjct: 1  MGKRKSRAKPAPTKRMDKLDTIFSCPFCNHGSSVECIIDMKHLIGKAACRICEESFSTTI 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDD 86
          TALTEAIDIYSEWIDECERVNT EDD
Sbjct: 61 TALTEAIDIYSEWIDECERVNTAEDD 86
[Close]
BLAST of Spo10381.1 vs. ExPASy Swiss-Prot
Match: ELOF1_BOVIN (Transcription elongation factor 1 homolog OS=Bos taurus GN=ELOF1 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.600e-18
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSLK--LDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTT 60
          MG+RKS+ KPPPKK +   L+T F+CPFCNH  S + ++D     G   C +C E F T 
Sbjct: 1  MGRRKSKRKPPPKKKMTGTLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTP 60

Query: 61 VTALTEAIDIYSEWIDECERVN 81
          +T L+E +D+YS+WID CE  N
Sbjct: 61 ITYLSEPVDVYSDWIDACEAAN 82
[Close]
BLAST of Spo10381.1 vs. ExPASy Swiss-Prot
Match: ELOF1_HUMAN (Transcription elongation factor 1 homolog OS=Homo sapiens GN=ELOF1 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.600e-18
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSLK--LDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTT 60
          MG+RKS+ KPPPKK +   L+T F+CPFCNH  S + ++D     G   C +C E F T 
Sbjct: 1  MGRRKSKRKPPPKKKMTGTLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTP 60

Query: 61 VTALTEAIDIYSEWIDECERVN 81
          +T L+E +D+YS+WID CE  N
Sbjct: 61 ITYLSEPVDVYSDWIDACEAAN 82
[Close]
BLAST of Spo10381.1 vs. ExPASy Swiss-Prot
Match: ELOF1_MOUSE (Transcription elongation factor 1 homolog OS=Mus musculus GN=Elof1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.600e-18
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSLK--LDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTT 60
          MG+RKS+ KPPPKK +   L+T F+CPFCNH  S + ++D     G   C +C E F T 
Sbjct: 1  MGRRKSKRKPPPKKKMTGTLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTP 60

Query: 61 VTALTEAIDIYSEWIDECERVN 81
          +T L+E +D+YS+WID CE  N
Sbjct: 61 ITYLSEPVDVYSDWIDACEAAN 82
[Close]
BLAST of Spo10381.1 vs. TAIR (Arabidopsis)
Match: AT5G46030.1 (unknown protein)

HSP 1 Score: 151.0 bits (380), Expect = 3.400e-37
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1 

		  

Query: 1  MGKRKSRAKPPPKKSL-KLDTVFSCPFCNHGTSVECRIDMKNLIGEAICRICQENFSTTV 60
          MGKRKSRAKP P K + KLDT+FSCPFCNHG+SVEC IDMK+LIG+A CRIC+E+FSTT+
Sbjct: 1  MGKRKSRAKPAPTKRMDKLDTIFSCPFCNHGSSVECIIDMKHLIGKAACRICEESFSTTI 60

Query: 61 TALTEAIDIYSEWIDECERVNTVEDD 86
          TALTEAIDIYSEWIDECERVNT EDD
Sbjct: 61 TALTEAIDIYSEWIDECERVNTAEDD 86
The following BLAST results are available for this feature:
BLAST of Spo10381.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902182850|gb|KNA09999.1|3.0e-43100.hypothetical protein SOVF_1484... [more]
gi|731350200|ref|XP_010686384.1|2.6e-3991.9PREDICTED: transcription elong... [more]
gi|1009161897|ref|XP_015899142.1|7.7e-3991.8PREDICTED: transcription elong... [more]
gi|449457009|ref|XP_004146241.1|8.5e-3889.6PREDICTED: transcription elong... [more]
gi|976910235|gb|KVH96985.1|2.5e-3789.5Transcription elongation facto... [more]
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BLAST of Spo10381.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QRV1_SPIOL2.1e-43100.Uncharacterized protein OS=Spi... [more]
A0A0J8BSS9_BETVU1.8e-3991.9Uncharacterized protein OS=Bet... [more]
A0A0A0LAG5_CUCSA5.9e-3889.6Uncharacterized protein OS=Cuc... [more]
A0A118JYE8_CYNCS1.7e-3789.5Transcription elongation facto... [more]
A0A059CCT8_EUCGR1.7e-3788.5Uncharacterized protein OS=Euc... [more]
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BLAST of Spo10381.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELOF1_ORYSJ1.3e-3889.5Transcription elongation facto... [more]
ELOF1_ARATH6.1e-3682.5Transcription elongation facto... [more]
ELOF1_BOVIN2.6e-1848.7Transcription elongation facto... [more]
ELOF1_HUMAN2.6e-1848.7Transcription elongation facto... [more]
ELOF1_MOUSE2.6e-1848.7Transcription elongation facto... [more]
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BLAST of Spo10381.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G46030.13.4e-3782.5unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007808Transcription elongation factor 1PANTHERPTHR20934UNCHARACTERIZEDcoord: 2..80
score: 4.2
IPR007808Transcription elongation factor 1PFAMPF05129Elf1coord: 2..77
score: 1.0
NoneNo IPR availableunknownSSF57783Zinc beta-ribboncoord: 1..80
score: 1.87

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006448 regulation of translational elongation
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003746 translation elongation factor activity
RNA-Seq Expression