Spo10404 (gene)

Overview
NameSpo10404
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionAT-rich interactive domain-containing protein 5A, putative
Locationchr5 : 18803938 .. 18806568 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTCACCATAAACAATCCCATTGGTGGCGCCACCATATCCAACAAATACACCACCACAACCACCACCACCACCACTACAACCACTTCCTACCCTCGCTTTCCTATCCTCCACCAGCACCAATACCACCGCCAATTCCTCCCCTCATCTCTTTCTCTCTCCTCAAGAACATCAACCTCCACCCTCACAGTAGCTGCCACTGGTAAGTTCACCTCCCGAACAGGGAAATTCGACAGCAGGAATAAAAGAGGTTCCTCCACCTCAACCAAGGAGGAATCTACGGCGGCGGACGAGAGGAATGGGTTGCTTAAAAATTACGAGGATGTTGATGCGGCGGATGTAATTGATGGTAGTGTTGATGATGGGTATTTCTTGCCAGACCTTCCTGGGGATAAGCCTAATTTTTGGGAGGGCTCACAATGGGATGGTCTTGGTTTCTTTGTTCAATATATGTGGGCTTTTGGTATTCTTTTCGCGGTAATCAACTTATCATACTCTTCAATACTATTTCAGTAAATTCATCCCTTTTTGCTTGTTTTCAATTTGTTTTTGGTAATTTTTGTATGTTTCAATATGTTACTAAGAAAAAAAAAGAAAAGAAAAGGAAAGCTTGATTTAAATGCATAAATTTGAGATTGAATGAATAAAGCTTAAATAAATATAAGTTGAGTTGAAACGAATAATTTGGTCCCGTTTGAAAGTTTTCTACGAAGTATTATGTTATGTGATTTGTACTATTCATAAACAATAGTTATTGATTTGAAACCAACCTAAGTTTATGACTTTAATTAACCACACAAGGAATAGTTATTCAATCATTTTTGGTGTCATGTGATGTTGGAGGGGGTGCTATAGATTTTTTAGTGGAAATATGTAGTGCTTGATGTTGATTCTAGATTGCTAGGTACTTTCTATTGATTAATAAATCCAATGATTCTTAGTTTAACATTACTTGATTAACTATTGCTATCTAACCTATCTTATAGATCACTCACCACATCTTTATGATTTTTTTGTTTGCCACTTTATTTATACTGTATTAATATAGACCATTGTGTGGTATATAGCAAGTTCCGACATTTGGTTGAACGTCTCTGTCGGTGTTGATTTGAGTCGCAGAGGAATCAAGATTATATCAGCAGTATGATTTGCTGAGTCTCCATGTTTAGTGGTTGCAGGGTTAATTTAAGCGTATTTTGAGAAGTGATGAGGTTGGAGATTTCTGAGTTCTGACTGGCTCTTACTAATTATGGCTGTTGTCTTTATGAAGGCATTTAGGATAGCACATTGTTCTTCACATTATCTAGTGTTCATATGTTGATGAGAAATATCTATTATCTTTAGTCGCCTTCTAGATCATGGCGATACTGGTAGTTTTTCTGTTCCAACTTGCCGTGAGTCCTTTTTTCTATTGTATCACAGCTAAGTTTGTGAAATCAGATCAGGAGATGTATACAGACCAGTCTACTAGAACTAAATGGTAATTTGATGTTTTACATATTCAGATAAATGATTGGGATCATTCATACAGATAACTAGACCATTTGTGCATTCTACCTGAGAAAACCAGGTCATATTAGTTTTCCCTCTATAGGAAACATGGTACGTGGTACTCAAATGTATGTACTAAATTGGGAAGCCTCTTGAGTCGTTTGAACTGCCATTTTTAACATTTTGTTTCTGGAGGGTCAAAATTCACTCTTAGAGCATGTTTGGTATAGAGATTTTAATTGATGGAAATGGAATCAATTAAATATTTCCACTACCTAGTGTTTGGTATGAGATGAGTGGTAACACAATCCATTTCCTAAGTGTAACCATTAGTCCATTACCACCATTTTTTACCCTTTCCCCTTCTTATCTATTTCCTTTCCTAAGTTTATACCAAACATGTTCTTAGTGTGAACCTTTCATTTGTGTTAAGTTCTTATGATGTGACGTTTAAGGTGAGACAAACCCTGACTTAATTGATAGTTTGGTGTGGTCTTACCTCTGGAGCATAGGTGTGTATTGCCTAGGCTTTCAGAATCATCCTTTCCTCTTTTCCCCTTCCTGGGGGTGAAAATCTAGAGTCTCGTTCTTAACTTACAGATTTATGTGATTCAAGTTCCTACTTATAGGTTTTGATATAAAGGCTGGAGGTATGATTATATGACATGGAGAATTTTTCTGCGAGGTATATTTGAGATTGAACCCATCAATTGAAGATATTACTAGTAGATGAAATGCACAGAAAACGTTTCAGCAGATTGACGTCAAAGCAAAAAGTTATTTCCATAATCATCATTTTCTGAAGTATCAGATTGTTAGTCTTGAAATGTAACAGTATGCAGATATATGTGTTGTCTATGCTTGGAATTAAGAATCTTCCACCTTCAAATTAACACACCGGGGGAGTCAGGTTGATGTTCGTATAAGTACTGACTGACTGAATGTTTAATTTGGTCCTCACAGCTGATTTCAAGTGGAATTGCTGTAGCCACCTATAACGAAGGGGCTACAGATTTTAGAGAAACTCCTGCATTCAAGGAATCTATCCAATCAAAGGATCTCTTAGAAGGACCCGAGGGATCTGACACAGACGTGTTTGAGTCCAACCCTACAGAGGAGGCTCCTGCTTTGGAATAA

mRNA sequence

ATGGCTCTCACCATAAACAATCCCATTGGTGGCGCCACCATATCCAACAAATACACCACCACAACCACCACCACCACCACTACAACCACTTCCTACCCTCGCTTTCCTATCCTCCACCAGCACCAATACCACCGCCAATTCCTCCCCTCATCTCTTTCTCTCTCCTCAAGAACATCAACCTCCACCCTCACAGTAGCTGCCACTGGTAAGTTCACCTCCCGAACAGGGAAATTCGACAGCAGGAATAAAAGAGGTTCCTCCACCTCAACCAAGGAGGAATCTACGGCGGCGGACGAGAGGAATGGGTTGCTTAAAAATTACGAGGATGTTGATGCGGCGGATGTAATTGATGGTAGTGTTGATGATGGGTATTTCTTGCCAGACCTTCCTGGGGATAAGCCTAATTTTTGGGAGGGCTCACAATGGGATGGTCTTGGTTTCTTTGTTCAATATATGTGGGCTTTTGGTATTCTTTTCGCGCTGATTTCAAGTGGAATTGCTGTAGCCACCTATAACGAAGGGGCTACAGATTTTAGAGAAACTCCTGCATTCAAGGAATCTATCCAATCAAAGGATCTCTTAGAAGGACCCGAGGGATCTGACACAGACGTGTTTGAGTCCAACCCTACAGAGGAGGCTCCTGCTTTGGAATAA

Coding sequence (CDS)

ATGGCTCTCACCATAAACAATCCCATTGGTGGCGCCACCATATCCAACAAATACACCACCACAACCACCACCACCACCACTACAACCACTTCCTACCCTCGCTTTCCTATCCTCCACCAGCACCAATACCACCGCCAATTCCTCCCCTCATCTCTTTCTCTCTCCTCAAGAACATCAACCTCCACCCTCACAGTAGCTGCCACTGGTAAGTTCACCTCCCGAACAGGGAAATTCGACAGCAGGAATAAAAGAGGTTCCTCCACCTCAACCAAGGAGGAATCTACGGCGGCGGACGAGAGGAATGGGTTGCTTAAAAATTACGAGGATGTTGATGCGGCGGATGTAATTGATGGTAGTGTTGATGATGGGTATTTCTTGCCAGACCTTCCTGGGGATAAGCCTAATTTTTGGGAGGGCTCACAATGGGATGGTCTTGGTTTCTTTGTTCAATATATGTGGGCTTTTGGTATTCTTTTCGCGCTGATTTCAAGTGGAATTGCTGTAGCCACCTATAACGAAGGGGCTACAGATTTTAGAGAAACTCCTGCATTCAAGGAATCTATCCAATCAAAGGATCTCTTAGAAGGACCCGAGGGATCTGACACAGACGTGTTTGAGTCCAACCCTACAGAGGAGGCTCCTGCTTTGGAATAA

Protein sequence

MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTSTSTLTVAATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGSVDDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFRETPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10404.1Spo10404.1mRNA


Homology
[Close]
BLAST of Spo10404.1 vs. NCBI nr
Match: gi|902213546|gb|KNA17285.1| (hypothetical protein SOVF_081240 [Spinacia oleracea])

HSP 1 Score: 419.1 bits (1076), Expect = 4.800e-114
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

		  

Query: 1   MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTST 60
           MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTST
Sbjct: 1   MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTST 60

Query: 61  STLTVAATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGSV 120
           STLTVAATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGSV
Sbjct: 61  STLTVAATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGSV 120

Query: 121 DDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFRE 180
           DDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFRE
Sbjct: 121 DDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFRE 180

Query: 181 TPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE 218
           TPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE
Sbjct: 181 TPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE 217
[Close]
BLAST of Spo10404.1 vs. NCBI nr
Match: gi|731333935|ref|XP_010677981.1| (PREDICTED: uncharacterized protein LOC104893560 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 265.8 bits (678), Expect = 6.700e-68
Identity = 153/218 (70.18%), Postives = 177/218 (81.19%), Query Frame = 1 

		  

Query: 1   MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTST 60
           MALTINNPIGGAT+ NKYTTT TTTTTTTTS          Q   QF  S LSLSSRT T
Sbjct: 1   MALTINNPIGGATLFNKYTTTITTTTTTTTS-------SNTQLSIQFFRSPLSLSSRTIT 60

Query: 61  STLTVA-ATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGS 120
           +T  +A ATGKF+SRTGKFDS+N+R SST+TK+E    D++N ++ ++E+ +  DVI+G 
Sbjct: 61  TTTFIASATGKFSSRTGKFDSKNRRNSSTTTKDE----DKKNVMIGDFEN-NGDDVIEG- 120

Query: 121 VDDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFR 180
           VDDGYFLPDLPG + +FWEG QWD  GF VQY+WAFGI+FALI+ GIAVAT+NEGATDFR
Sbjct: 121 VDDGYFLPDLPGLQTDFWEGPQWDTFGFVVQYLWAFGIVFALIACGIAVATFNEGATDFR 180

Query: 181 ETPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE 218
           ETPAFKESIQS+DLLEGPE SDTDVFESNPTEEAPALE
Sbjct: 181 ETPAFKESIQSQDLLEGPEASDTDVFESNPTEEAPALE 205
[Close]
BLAST of Spo10404.1 vs. NCBI nr
Match: gi|720029252|ref|XP_010265163.1| (PREDICTED: uncharacterized protein LOC104602981 [Nelumbo nucifera])

HSP 1 Score: 196.1 bits (497), Expect = 6.600e-47
Identity = 102/172 (59.30%), Postives = 133/172 (77.33%), Query Frame = 1 

		  

Query: 49  PSSLSLSSRTSTS-TLTVAATGKFTSRTGKFDSRNKR-GSSTSTKEESTAADERNGLLK- 108
           PS++S SS +       +    K +SRTG+FDS+NK+ G  T+T+EE     +  G+++ 
Sbjct: 30  PSNISYSSSSRRKRNAHIVCARKISSRTGRFDSKNKKSGGLTTTREEDVGQKKEGGVIED 89

Query: 109 NYEDVDAADVIDGSVDDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSG 168
           + +D  +   +D  VDDGYFLP+LPGDKP+FWEG QWD LGFFVQYMWAFGI+FALI+ G
Sbjct: 90  DVDDTTSNSTVD--VDDGYFLPELPGDKPDFWEGPQWDALGFFVQYMWAFGIVFALIACG 149

Query: 169 IAVATYNEGATDFRETPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE 218
           IAVATYNEGATDF++TP +KESIQS++LLE PE S++DVFE+NPTEEAP+LE
Sbjct: 150 IAVATYNEGATDFKQTPVYKESIQSRELLEEPEASNSDVFEANPTEEAPSLE 199
[Close]
BLAST of Spo10404.1 vs. NCBI nr
Match: gi|976919174|gb|KVI04273.1| (hypothetical protein Ccrd_017416 [Cynara cardunculus var. scolymus])

HSP 1 Score: 193.4 bits (490), Expect = 4.300e-46
Identity = 112/192 (58.33%), Postives = 135/192 (70.31%), Query Frame = 1 

		  

Query: 26  TTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTSTSTLTVAATGKFTSRTGKFDSRNKRG 85
           T+T T Y R P+      HR F  S    SSRT      V+A  K +SRTGKFDSRNKRG
Sbjct: 12  TSTITPYTRLPL------HRPF--SFTHPSSRTPFHL--VSAAKKLSSRTGKFDSRNKRG 71

Query: 86  SSTSTKEESTAADERNGLLKNYEDVDAADVIDGSVDDGYFLPDLPGDKPNFWEGSQWDGL 145
           S TST E+ ++ +  +G +   +  +  +       DGY LPDLPG +P+FWEG QWD  
Sbjct: 72  S-TSTTEDESSGEFNDGAIGTVDGTEVENF------DGYVLPDLPGLEPDFWEGPQWDAF 131

Query: 146 GFFVQYMWAFGILFALISSGIAVATYNEGATDFRETPAFKESIQSKDLLEGPEGSDTDVF 205
           GFFV+Y+WAFGI+FAL+SSGIAV+TYNEGATDF+ETPA+KESIQS+DLLE PE S  DVF
Sbjct: 132 GFFVEYLWAFGIVFALVSSGIAVSTYNEGATDFKETPAYKESIQSRDLLEEPEASSPDVF 186

Query: 206 ESNPTEEAPALE 218
           ESNPTEEAP LE
Sbjct: 192 ESNPTEEAPTLE 186
[Close]
BLAST of Spo10404.1 vs. NCBI nr
Match: gi|747053540|ref|XP_011072937.1| (PREDICTED: uncharacterized protein LOC105158032 [Sesamum indicum])

HSP 1 Score: 189.5 bits (480), Expect = 6.100e-45
Identity = 113/210 (53.81%), Postives = 143/210 (68.10%), Query Frame = 1 

		  

Query: 19  TTTTTTTTTTTTSYPRFPILHQHQYHRQFL-PSSLSLSSRTSTSTLTVAATGK---FTSR 78
           T+    TT   T Y   P+      HR FL PSS S S    +   TV+A+ K    +SR
Sbjct: 7   TSRILCTTPKKTPYAHVPL------HRPFLNPSSPSWSHHPRSLPFTVSASPKKFSSSSR 66

Query: 79  TGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDG-------SVDDGYFLP 138
           TG+FDS+N+R S  +TKEE  A +E           +A D I+G       +VDDG+ +P
Sbjct: 67  TGRFDSKNRRNSPVTTKEEEEAEEE-----------EATDEIEGDDYSTSFAVDDGFVMP 126

Query: 139 DLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFRETPAFKES 198
            LPG +PNFWEG QWD LGFFV+YMWAFGILFAL++ GIAVATYN+GATDF++TPA+KES
Sbjct: 127 KLPGTEPNFWEGPQWDALGFFVEYMWAFGILFALVACGIAVATYNDGATDFKQTPAYKES 186

Query: 199 IQSKDLLEGPEGSDTDVFESNPTEEAPALE 218
           IQS++LLE PE S++DVFESNPTE+AP+LE
Sbjct: 187 IQSQELLEEPEASNSDVFESNPTEQAPSLE 199
[Close]
BLAST of Spo10404.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCT9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_081240 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.300e-114
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

		  

Query: 1   MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTST 60
           MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTST
Sbjct: 1   MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTST 60

Query: 61  STLTVAATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGSV 120
           STLTVAATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGSV
Sbjct: 61  STLTVAATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGSV 120

Query: 121 DDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFRE 180
           DDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFRE
Sbjct: 121 DDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFRE 180

Query: 181 TPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE 218
           TPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE
Sbjct: 181 TPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE 217
[Close]
BLAST of Spo10404.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CG94_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110850 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.700e-68
Identity = 153/218 (70.18%), Postives = 177/218 (81.19%), Query Frame = 1 

		  

Query: 1   MALTINNPIGGATISNKYTTTTTTTTTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTST 60
           MALTINNPIGGAT+ NKYTTT TTTTTTTTS          Q   QF  S LSLSSRT T
Sbjct: 1   MALTINNPIGGATLFNKYTTTITTTTTTTTS-------SNTQLSIQFFRSPLSLSSRTIT 60

Query: 61  STLTVA-ATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAADVIDGS 120
           +T  +A ATGKF+SRTGKFDS+N+R SST+TK+E    D++N ++ ++E+ +  DVI+G 
Sbjct: 61  TTTFIASATGKFSSRTGKFDSKNRRNSSTTTKDE----DKKNVMIGDFEN-NGDDVIEG- 120

Query: 121 VDDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVATYNEGATDFR 180
           VDDGYFLPDLPG + +FWEG QWD  GF VQY+WAFGI+FALI+ GIAVAT+NEGATDFR
Sbjct: 121 VDDGYFLPDLPGLQTDFWEGPQWDTFGFVVQYLWAFGIVFALIACGIAVATFNEGATDFR 180

Query: 181 ETPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE 218
           ETPAFKESIQS+DLLEGPE SDTDVFESNPTEEAPALE
Sbjct: 181 ETPAFKESIQSQDLLEGPEASDTDVFESNPTEEAPALE 205
[Close]
BLAST of Spo10404.1 vs. UniProtKB/TrEMBL
Match: A0A118K2F7_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017416 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.000e-46
Identity = 112/192 (58.33%), Postives = 135/192 (70.31%), Query Frame = 1 

		  

Query: 26  TTTTTSYPRFPILHQHQYHRQFLPSSLSLSSRTSTSTLTVAATGKFTSRTGKFDSRNKRG 85
           T+T T Y R P+      HR F  S    SSRT      V+A  K +SRTGKFDSRNKRG
Sbjct: 12  TSTITPYTRLPL------HRPF--SFTHPSSRTPFHL--VSAAKKLSSRTGKFDSRNKRG 71

Query: 86  SSTSTKEESTAADERNGLLKNYEDVDAADVIDGSVDDGYFLPDLPGDKPNFWEGSQWDGL 145
           S TST E+ ++ +  +G +   +  +  +       DGY LPDLPG +P+FWEG QWD  
Sbjct: 72  S-TSTTEDESSGEFNDGAIGTVDGTEVENF------DGYVLPDLPGLEPDFWEGPQWDAF 131

Query: 146 GFFVQYMWAFGILFALISSGIAVATYNEGATDFRETPAFKESIQSKDLLEGPEGSDTDVF 205
           GFFV+Y+WAFGI+FAL+SSGIAV+TYNEGATDF+ETPA+KESIQS+DLLE PE S  DVF
Sbjct: 132 GFFVEYLWAFGIVFALVSSGIAVSTYNEGATDFKETPAYKESIQSRDLLEEPEASSPDVF 186

Query: 206 ESNPTEEAPALE 218
           ESNPTEEAP LE
Sbjct: 192 ESNPTEEAPTLE 186
[Close]
BLAST of Spo10404.1 vs. UniProtKB/TrEMBL
Match: A0A067JJF5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05879 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.100e-44
Identity = 111/189 (58.73%), Postives = 135/189 (71.43%), Query Frame = 1 

		  

Query: 39  HQHQYHRQFLPSSLSLSSRTSTSTLTVAATGKFTSRTGKFDSRNKRGSSTST----KEES 98
           H  Q HR  +   L LS R S     V+A    +SRTG+FDSRN+R S T+     +EE 
Sbjct: 23  HHSQIHRPQI--LLPLSPRRSLHI--VSAKKLSSSRTGRFDSRNRRSSITTRDKEDEEER 82

Query: 99  TAADERNGLLKNYEDVDAADVIDGSV------DDGYFLPDLPGDKPNFWEGSQWDGLGFF 158
           TA  ER G   + ED   + V + S       DDGYFLP LPGD+P+FWEGS+WDGLGFF
Sbjct: 83  TAEIERTG--GSNEDFSGSKVENVSTSSVDAEDDGYFLPPLPGDEPDFWEGSKWDGLGFF 142

Query: 159 VQYMWAFGILFALISSGIAVATYNEGATDFRETPAFKESIQSKDLLEGPEGSDTDVFESN 218
           VQYMWAFG++FALI+ GIAV TYNEGATDF+ETPA+KESIQS++LLE PE S++DVFESN
Sbjct: 143 VQYMWAFGVVFALIACGIAVVTYNEGATDFKETPAYKESIQSQELLEEPEASNSDVFESN 202
[Close]
BLAST of Spo10404.1 vs. UniProtKB/TrEMBL
Match: A0A068TQ41_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022530001 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.200e-42
Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 1 

		  

Query: 55  SSRTSTSTLTVAATGKFTSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAAD 114
           S RT   T+  A+    +SRTGKFDS+ KR SS ST EE+    E    LK   ++D   
Sbjct: 34  SPRTHHLTVVSASKKLSSSRTGKFDSK-KRRSSVSTTEEA----EETPKLK---ELDRTA 93

Query: 115 VIDGS-----VDDGYFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVA 174
            IDGS     VDDG+ +P+LPG+KP+FWEG QWD LGF +QY+WAFGI+FALI+ GIAVA
Sbjct: 94  DIDGSGPTVTVDDGFVMPELPGEKPDFWEGPQWDTLGFVIQYLWAFGIVFALIACGIAVA 153

Query: 175 TYNEGATDFRETPAFKESIQSKDLLEGPEGSDTDVFESNPTEEAPALE 218
           TYNEGATDF++TPA+KESIQS++LLE PE S +DVFESNPTEEAP+LE
Sbjct: 154 TYNEGATDFKDTPAYKESIQSRELLEEPEASGSDVFESNPTEEAPSLE 193
[Close]
BLAST of Spo10404.1 vs. TAIR (Arabidopsis)
Match: AT1G73885.1 (unknown protein)

HSP 1 Score: 124.4 bits (311), Expect = 8.600e-29
Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 1 

		  

Query: 56  SRTSTSTLTVAATGKF-TSRTGKFDSRNKRGSSTSTKEESTAADERNGLLKNYEDVDAAD 115
           +R   + LT ++   F T R   F + ++        E     +  + ++ N ED D   
Sbjct: 12  ARIRCNDLTDSSRNPFSTFRLVNFPNPSRTEQQEEGNEGFDGENPPSQIVINDEDGDRTV 71

Query: 116 V---IDGSVDDG--YFLPDLPGDKPNFWEGSQWDGLGFFVQYMWAFGILFALISSGIAVA 175
           V     G   D   + + DLPG +P+ +EG +WDGLGFFVQY+WAFGILFALIS G+A  
Sbjct: 72  VNTRFRGDPKDAPKFAIKDLPGLEPDPFEGEKWDGLGFFVQYLWAFGILFALISGGLAAG 131

Query: 176 TYNEGATDFRETPAFKESIQSKDLLEGPEGSDT-DVFESNPTEEAPAL 217
           TYNEGATDF+ETP +KE+IQS+DLL+  E S++ DVFESNPTE AP +
Sbjct: 132 TYNEGATDFKETPVYKEAIQSRDLLDEAESSNSEDVFESNPTEVAPTI 179
The following BLAST results are available for this feature:
BLAST of Spo10404.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902213546|gb|KNA17285.1|4.8e-114100.hypothetical protein SOVF_0812... [more]
gi|731333935|ref|XP_010677981.1|6.7e-6870.1PREDICTED: uncharacterized pro... [more]
gi|720029252|ref|XP_010265163.1|6.6e-4759.3PREDICTED: uncharacterized pro... [more]
gi|976919174|gb|KVI04273.1|4.3e-4658.3hypothetical protein Ccrd_0174... [more]
gi|747053540|ref|XP_011072937.1|6.1e-4553.8PREDICTED: uncharacterized pro... [more]
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BLAST of Spo10404.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RCT9_SPIOL3.3e-114100.Uncharacterized protein OS=Spi... [more]
A0A0J8CG94_BETVU4.7e-6870.1Uncharacterized protein OS=Bet... [more]
A0A118K2F7_CYNCS3.0e-4658.3Uncharacterized protein OS=Cyn... [more]
A0A067JJF5_JATCU2.1e-4458.7Uncharacterized protein OS=Jat... [more]
A0A068TQ41_COFCA1.2e-4261.3Uncharacterized protein OS=Cof... [more]
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BLAST of Spo10404.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo10404.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G73885.18.6e-2946.4unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36004FAMILY NOT NAMEDcoord: 2..217
score: 5.0
NoneNo IPR availablePANTHERPTHR36004:SF1SUBFAMILY NOT NAMEDcoord: 2..217
score: 5.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008152 metabolic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0048481 plant ovule development
biological_process GO:0006591 ornithine metabolic process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009657 plastid organization
biological_process GO:0015979 photosynthesis
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0050896 response to stimulus
biological_process GO:0006364 rRNA processing
biological_process GO:0009637 response to blue light
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0010207 photosystem II assembly
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010114 response to red light
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0010218 response to far red light
cellular_component GO:0005840 ribosome
cellular_component GO:0044425 membrane part
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009523 photosystem II
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009348 ornithine carbamoyltransferase complex
cellular_component GO:0009533 chloroplast stromal thylakoid
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
molecular_function GO:0016853 isomerase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004585 ornithine carbamoyltransferase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003743 translation initiation factor activity
RNA-Seq Expression