Spo10512 (gene)

Overview
NameSpo10512
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 61791892 .. 61792259 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCTTGTGGGGAAGAGATCAGAGCCATTCAGAGGAGGAGGAGAACTCAGCGGGCTATATATGAAGGGTATTTCATATATAGAGATATTGAATCTAACTGTGCAACCCTCCACAGTCTCTACCAAGCAAATACCATTAACGAGGTATCAAGAAAAAGTCATTTTCAATCTCAATTTCCAGTTTCATACCCTTCAATAGTTCCCTTATTTGCAGCTCCACGTTCTAATTTGAGCTTCTGTTTGTAACAGTTGGCTATCTTCTGATCCAGCTCATAGTAAACTTCCATTTTATTTAGGGGTTTCATGTCAAGGTCGATGAAAAATGCCTGCAAGAGTGCGTAGATCACAACTCACAAGGAACTTAG

mRNA sequence

ATGAGATCTTGTGGGGAAGAGATCAGAGCCATTCAGAGGAGGAGGAGAACTCAGCGGGCTATATATGAAGGGTATTTCATATATAGAGATATTGAATCTAACTGTGCAACCCTCCACAGTCTCTACCAAGCAAATACCATTAACGAGGGGTTTCATGTCAAGGTCGATGAAAAATGCCTGCAAGAGTGCGTAGATCACAACTCACAAGGAACTTAG

Coding sequence (CDS)

ATGAGATCTTGTGGGGAAGAGATCAGAGCCATTCAGAGGAGGAGGAGAACTCAGCGGGCTATATATGAAGGGTATTTCATATATAGAGATATTGAATCTAACTGTGCAACCCTCCACAGTCTCTACCAAGCAAATACCATTAACGAGGGGTTTCATGTCAAGGTCGATGAAAAATGCCTGCAAGAGTGCGTAGATCACAACTCACAAGGAACTTAG

Protein sequence

MRSCGEEIRAIQRRRRTQRAIYEGYFIYRDIESNCATLHSLYQANTINEGFHVKVDEKCLQECVDHNSQGT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10512.1Spo10512.1mRNA


Homology
[Close]
BLAST of Spo10512.1 vs. NCBI nr
Match: gi|902218271|gb|KNA17981.1| (hypothetical protein SOVF_074920 [Spinacia oleracea])

HSP 1 Score: 101.7 bits (252), Expect = 5.500e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

		  

Query: 1  MRSCGEEIRAIQRRRRTQRAIYEGYFIYRDIESNCATLHSLYQANTINE 50
          MRSCGEEIRAIQRRRRTQRAIYEGYFIYRDIESNCATLHSLYQANTINE
Sbjct: 1  MRSCGEEIRAIQRRRRTQRAIYEGYFIYRDIESNCATLHSLYQANTINE 49
[Close]
BLAST of Spo10512.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REQ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_074920 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.800e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

		  

Query: 1  MRSCGEEIRAIQRRRRTQRAIYEGYFIYRDIESNCATLHSLYQANTINE 50
          MRSCGEEIRAIQRRRRTQRAIYEGYFIYRDIESNCATLHSLYQANTINE
Sbjct: 1  MRSCGEEIRAIQRRRRTQRAIYEGYFIYRDIESNCATLHSLYQANTINE 49
The following BLAST results are available for this feature:
BLAST of Spo10512.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902218271|gb|KNA17981.1|5.5e-19100.hypothetical protein SOVF_0749... [more]
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BLAST of Spo10512.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9REQ6_SPIOL3.8e-19100.Uncharacterized protein OS=Spi... [more]
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BLAST of Spo10512.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo10512.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0008152 metabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0015078 proton transmembrane transporter activity
RNA-Seq Expression