Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACCCAACAGAAAAGCTCGTTTCTCACCATCTTCATCCTCAACATCAACTGTCACCTACACATACAGAAATGACAACTCTACCCTCCCCAAAACCACAACCACTGAAATTCCGATCACCGTCCATTTCCATGATCACTCAGCTGCAGCTTCTAAGATACAGACAGCCTATCGTTCCTACGTGGTCCGCTCTCTCTTAAAGAAGATCGCAGCCATTGAAAAAGAGGTTGATAAATTGGAGAGGCTGATCCAACAGCAGGAAACTGTGGATGCAGTAAGGAGTAGTGAAAAGGACAAGTTGCGGATCAATGAGGCTTTGATGGTTCAGTTGTTGAAGTTGGATTCTGTTCCTGGGTTTAACTTGAGTGTAAAGGAGCTGAGGAAGAGTTTGAGCCGTCGGATCGTGGGGTTGCAAGAGGTGATGGATGGCATTTGTGGTGATCATAGATTAATGGATGGATGGGATTTATGGAGGGATTGGGATGAGGGGTTTGGTGGGATTGAGGAAAAGTTTTGTAGGGAAAGAGGTGGGGAGGAGTTGGAGAAGTTTTGTGCCTATAACTTGGGTTTTCGATGTTTAGAGAGGTTTTTGCGACAATAA ATGAAACCCAACAGAAAAGCTCGTTTCTCACCATCTTCATCCTCAACATCAACTGTCACCTACACATACAGAAATGACAACTCTACCCTCCCCAAAACCACAACCACTGAAATTCCGATCACCGTCCATTTCCATGATCACTCAGCTGCAGCTTCTAAGATACAGACAGCCTATCGTTCCTACGTGGTCCGCTCTCTCTTAAAGAAGATCGCAGCCATTGAAAAAGAGGTTGATAAATTGGAGAGGCTGATCCAACAGCAGGAAACTGTGGATGCAGTAAGGAGTAGTGAAAAGGACAAGTTGCGGATCAATGAGGCTTTGATGGTTCAGTTGTTGAAGTTGGATTCTGTTCCTGGGTTTAACTTGAGTGTAAAGGAGCTGAGGAAGAGTTTGAGCCGTCGGATCGTGGGGTTGCAAGAGGTGATGGATGGCATTTGTGGTGATCATAGATTAATGGATGGATGGGATTTATGGAGGGATTGGGATGAGGGGTTTGGTGGGATTGAGGAAAAGTTTTGTAGGGAAAGAGGTGGGGAGGAGTTGGAGAAGTTTTGTGCCTATAACTTGGGTTTTCGATGTTTAGAGAGGTTTTTGCGACAATAA ATGAAACCCAACAGAAAAGCTCGTTTCTCACCATCTTCATCCTCAACATCAACTGTCACCTACACATACAGAAATGACAACTCTACCCTCCCCAAAACCACAACCACTGAAATTCCGATCACCGTCCATTTCCATGATCACTCAGCTGCAGCTTCTAAGATACAGACAGCCTATCGTTCCTACGTGGTCCGCTCTCTCTTAAAGAAGATCGCAGCCATTGAAAAAGAGGTTGATAAATTGGAGAGGCTGATCCAACAGCAGGAAACTGTGGATGCAGTAAGGAGTAGTGAAAAGGACAAGTTGCGGATCAATGAGGCTTTGATGGTTCAGTTGTTGAAGTTGGATTCTGTTCCTGGGTTTAACTTGAGTGTAAAGGAGCTGAGGAAGAGTTTGAGCCGTCGGATCGTGGGGTTGCAAGAGGTGATGGATGGCATTTGTGGTGATCATAGATTAATGGATGGATGGGATTTATGGAGGGATTGGGATGAGGGGTTTGGTGGGATTGAGGAAAAGTTTTGTAGGGAAAGAGGTGGGGAGGAGTTGGAGAAGTTTTGTGCCTATAACTTGGGTTTTCGATGTTTAGAGAGGTTTTTGCGACAATAA MKPNRKARFSPSSSSTSTVTYTYRNDNSTLPKTTTTEIPITVHFHDHSAAASKIQTAYRSYVVRSLLKKIAAIEKEVDKLERLIQQQETVDAVRSSEKDKLRINEALMVQLLKLDSVPGFNLSVKELRKSLSRRIVGLQEVMDGICGDHRLMDGWDLWRDWDEGFGGIEEKFCRERGGEELEKFCAYNLGFRCLERFLRQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10603.1 vs. NCBI nr
Match: gi|902176520|gb|KNA08781.1| (hypothetical protein SOVF_159090, partial [Spinacia oleracea]) HSP 1 Score: 383.3 bits (983), Expect = 2.700e-103 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1
BLAST of Spo10603.1 vs. NCBI nr
Match: gi|731350874|ref|XP_010686736.1| (PREDICTED: BAG family molecular chaperone regulator 5, mitochondrial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 281.6 bits (719), Expect = 1.100e-72 Identity = 154/216 (71.30%), Postives = 176/216 (81.48%), Query Frame = 1
BLAST of Spo10603.1 vs. NCBI nr
Match: gi|359495554|ref|XP_003635020.1| (PREDICTED: BAG family molecular chaperone regulator 5, mitochondrial [Vitis vinifera]) HSP 1 Score: 198.7 bits (504), Expect = 9.300e-48 Identity = 114/218 (52.29%), Postives = 162/218 (74.31%), Query Frame = 1
BLAST of Spo10603.1 vs. NCBI nr
Match: gi|595873792|ref|XP_007212047.1| (hypothetical protein PRUPE_ppa011380mg [Prunus persica]) HSP 1 Score: 196.8 bits (499), Expect = 3.500e-47 Identity = 118/215 (54.88%), Postives = 151/215 (70.23%), Query Frame = 1
BLAST of Spo10603.1 vs. NCBI nr
Match: gi|731439310|ref|XP_010646199.1| (PREDICTED: fumarylacetoacetase isoform X2 [Vitis vinifera]) HSP 1 Score: 196.4 bits (498), Expect = 4.600e-47 Identity = 114/222 (51.35%), Postives = 163/222 (73.42%), Query Frame = 1
BLAST of Spo10603.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQG9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_159090 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 1.900e-103 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1
BLAST of Spo10603.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BRU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g185190 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 7.600e-73 Identity = 154/216 (71.30%), Postives = 176/216 (81.48%), Query Frame = 1
BLAST of Spo10603.1 vs. UniProtKB/TrEMBL
Match: F6HRM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0187g00290 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 6.500e-48 Identity = 114/218 (52.29%), Postives = 162/218 (74.31%), Query Frame = 1
BLAST of Spo10603.1 vs. UniProtKB/TrEMBL
Match: M5WIZ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011380mg PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.500e-47 Identity = 118/215 (54.88%), Postives = 151/215 (70.23%), Query Frame = 1
BLAST of Spo10603.1 vs. UniProtKB/TrEMBL
Match: V4W9X0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018181mg PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.100e-46 Identity = 104/197 (52.79%), Postives = 145/197 (73.60%), Query Frame = 1
BLAST of Spo10603.1 vs. ExPASy Swiss-Prot
Match: BAG5_ARATH (BAG family molecular chaperone regulator 5, mitochondrial OS=Arabidopsis thaliana GN=BAG5 PE=1 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.300e-41 Identity = 101/217 (46.54%), Postives = 148/217 (68.20%), Query Frame = 1
BLAST of Spo10603.1 vs. TAIR (Arabidopsis)
Match: AT1G12060.1 (BCL-2-associated athanogene 5) HSP 1 Score: 171.0 bits (432), Expect = 7.300e-43 Identity = 101/217 (46.54%), Postives = 148/217 (68.20%), Query Frame = 1
BLAST of Spo10603.1 vs. TAIR (Arabidopsis)
Match: AT2G46240.1 (BCL-2-associated athanogene 6) HSP 1 Score: 50.8 bits (120), Expect = 1.100e-6 Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10603.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10603.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10603.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo10603.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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