Spo10627 (gene) | SpinachBase

Overview


Name	Spo10627
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Phot
Location	chr1 : 40333403 .. 40334464 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATAGCCGTTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATAGTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCCTTAGGGGGTTGGTTTACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTAACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTTGCTCTTCATGGTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGGTCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATGCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGTCGCTCTGCTATGCGCTATTCATGGTGCTACCGTTGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGACTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTCTTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

mRNA sequence

ATGACTATAGCCGTTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATAGTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCCTTAGGGGGTTGGTTTACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTAACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTTGCTCTTCATGGTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGGTCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATGCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGTCGCTCTGCTATGCGCTATTCATGGTGCTACCGTTGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGACTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTCTTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

Coding sequence (CDS)

ATGACTATAGCCGTTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATAGTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCCTTAGGGGGTTGGTTTACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTAACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTTGCTCTTCATGGTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGGTCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATGCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGTCGCTCTGCTATGCGCTATTCATGGTGCTACCGTTGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGACTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTCTTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

Protein sequence

MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo10627.1	Spo10627.1	mRNA

Homology

[Close]

BLAST of Spo10627.1 vs. NCBI nr
Match: gi|11497520|ref|NP_054928.1| (photosystem II protein D2 [Spinacia oleracea])

HSP 1 Score: 721.8 bits (1862), Expect = 5.600e-205
Identity = 350/353 (99.15%), Postives = 350/353 (99.15%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. NCBI nr
Match: gi|7525028|ref|NP_051054.1| (photosystem II protein D2 [Arabidopsis thaliana])

HSP 1 Score: 718.4 bits (1853), Expect = 6.200e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. NCBI nr
Match: gi|377581198|gb|AFB70737.1| (photosystem II D2 protein, partial (chloroplast) [Mollugo verticillata])

HSP 1 Score: 718.0 bits (1852), Expect = 8.100e-204
Identity = 348/353 (98.58%), Postives = 348/353 (98.58%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIAVGKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLW FVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. NCBI nr
Match: gi|377829870|ref|YP_005296095.1| (psbD gene product (chloroplast) [Pentactina rupicola])

HSP 1 Score: 717.6 bits (1851), Expect = 1.100e-203
Identity = 347/353 (98.30%), Postives = 348/353 (98.58%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLW FVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           F LIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. NCBI nr
Match: gi|139389637|ref|YP_001123194.1| (PSII D2 protein [Arabis hirsuta])

HSP 1 Score: 717.2 bits (1850), Expect = 1.400e-203
Identity = 347/353 (98.30%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFEL+RSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELSRSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A0U5CLC7_9BRAS (Photosystem II D2 protein OS=Arabidopsis pedemontana GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A109RTK3_CAPBU (Photosystem II D2 protein OS=Capsella bursa-pastoris GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A0U2JIX2_9BRAS (Photosystem II D2 protein OS=Schrenkiella parvula GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A0U2SJ90_9BRAS (Photosystem II D2 protein OS=Eutrema heterophyllum GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A0P0KLX6_9ROSI (Photosystem II D2 protein OS=Ostrya rehderiana GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_SPIOL (Photosystem II D2 protein OS=Spinacia oleracea GN=psbD PE=1 SV=3)

HSP 1 Score: 721.8 bits (1862), Expect = 3.500e-207
Identity = 350/353 (99.15%), Postives = 350/353 (99.15%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_CAPBU (Photosystem II D2 protein OS=Capsella bursa-pastoris GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 3.900e-206
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_ARATH (Photosystem II D2 protein OS=Arabidopsis thaliana GN=psbD PE=1 SV=3)

HSP 1 Score: 718.4 bits (1853), Expect = 3.900e-206
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_DRANE (Photosystem II D2 protein OS=Draba nemorosa GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 3.900e-206
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_ARAHI (Photosystem II D2 protein OS=Arabis hirsuta GN=psbD PE=3 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 8.600e-206
Identity = 347/353 (98.30%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFEL+RSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELSRSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. TAIR (Arabidopsis)
Match: ATCG00270.1 (photosystem II reaction center protein D)

HSP 1 Score: 718.4 bits (1853), Expect = 2.200e-207
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1

		  
Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]

BLAST of Spo10627.1 vs. TAIR (Arabidopsis)
Match: ATCG00020.1 (photosystem II reaction center protein A)

HSP 1 Score: 146.4 bits (368), Expect = 3.400e-35
Identity = 89/300 (29.67%), Postives = 159/300 (53.00%), Query Frame = 1

		  
Query: 10  KDEKDLFDSMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 69
           ++ + L+    +W+   +  +++GW G+L+ P    A   +             G+    
Sbjct: 8   RESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67

Query: 70  ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALI 129
           + S L G N ++ A+   + ++      +W   +  +   W   GG +  + LH    + 
Sbjct: 68  SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 127

Query: 130 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIFRFIL 189
            +M R++EL+  + +RP+ A+A+S P+A   +VFLIY +GQ  +      G++  F F++
Sbjct: 128 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 187

Query: 190 FFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFE---DGDGANTFRTFNPTQA 249
            FQ  HN  ++PFHM+GVAGV G +L  A+HG+ V ++L     + + AN    F   Q 
Sbjct: 188 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG--QE 247

Query: 250 EETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 300
           EETY++V A+ ++ ++     +F+N R LHFF+   PV G+W +ALG+  +A NL  ++F
Sbjct: 248 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

The following BLAST results are available for this feature:

BLAST of Spo10627.1 vs. NCBI nr
BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
BLAST of Spo10627.1 vs. TAIR (Arabidopsis)

BLAST of Spo10627.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|11497520\|ref\|NP_054928.1\|	5.6e-205	99.1	photosystem II protein D2 [Spi...	[more]
gi\|7525028\|ref\|NP_051054.1\|	6.2e-204	98.5	photosystem II protein D2 [Ara...	[more]
gi\|377581198\|gb\|AFB70737.1\|	8.1e-204	98.5	photosystem II D2 protein, par...	[more]
gi\|377829870\|ref\|YP_005296095.1\|	1.1e-203	98.3	psbD gene product (chloroplast...	[more]
gi\|139389637\|ref\|YP_001123194.1\|	1.4e-203	98.3	PSII D2 protein [Arabis hirsut...	[more]

BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0U5CLC7_9BRAS	4.3e-204	98.5	Photosystem II D2 protein OS=A...	[more]
A0A109RTK3_CAPBU	4.3e-204	98.5	Photosystem II D2 protein OS=C...	[more]
A0A0U2JIX2_9BRAS	4.3e-204	98.5	Photosystem II D2 protein OS=S...	[more]
A0A0U2SJ90_9BRAS	4.3e-204	98.5	Photosystem II D2 protein OS=E...	[more]
A0A0P0KLX6_9ROSI	4.3e-204	98.5	Photosystem II D2 protein OS=O...	[more]

BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
PSBD_SPIOL	3.5e-207	99.1	Photosystem II D2 protein OS=S...	[more]
PSBD_CAPBU	3.9e-206	98.5	Photosystem II D2 protein OS=C...	[more]
PSBD_ARATH	3.9e-206	98.5	Photosystem II D2 protein OS=A...	[more]
PSBD_DRANE	3.9e-206	98.5	Photosystem II D2 protein OS=D...	[more]
PSBD_ARAHI	8.6e-206	98.3	Photosystem II D2 protein OS=A...	[more]

BLAST of Spo10627.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
ATCG00270.1	2.2e-207	98.5	photosystem II reaction center...	[more]
ATCG00020.1	3.4e-35	29.6	photosystem II reaction center...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PRINTS	PR00256	REACTNCENTRE	coord: 197..223 score: 9.4E-9coord: 142..164 score: 9.4E-9coord: 109..137 score: 9.
IPR000484	Photosynthetic reaction centre, L/M	GENE3D	1.20.85.10		coord: 10..187 score: 9.3E-50coord: 191..322 score: 1.5
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 29..318 score: 8.8
IPR000484	Photosynthetic reaction centre, L/M	PROSITE	PS00244	REACTION_CENTER	coord: 191..217 scor
IPR000484	Photosynthetic reaction centre, L/M	unknown	SSF81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 16..352 score: 7.59E
IPR005868	Photosystem II D2 protein	HAMAP	MF_01383	PSII_PsbD_D2	coord: 1..353 score: 59
IPR005868	Photosystem II D2 protein	TIGRFAMs	TIGR01152	TIGR01152	coord: 1..353 score: 4.6E
None	No IPR available	PANTHER	PTHR33149	FAMILY NOT NAMED	coord: 1..353 score: 2.4E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0008152	metabolic process
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009769	photosynthesis, light harvesting in photosystem II
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0006412	translation
biological_process	GO:0009853	photorespiration
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0019253	reductive pentose-phosphate cycle
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0046487	glyoxylate metabolic process
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009573	chloroplast ribulose bisphosphate carboxylase complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0030076	light-harvesting complex
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0044425	membrane part
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0016020	membrane
cellular_component	GO:0005773	vacuole
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0045157	electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0009678	hydrogen-translocating pyrophosphatase activity
molecular_function	GO:0004427	inorganic diphosphatase activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0030785	[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo24717	0.97	Barchart \| Table
Spo17010	0.94	Barchart \| Table
Spo22445	0.94	Barchart \| Table
Spo06201	0.93	Barchart \| Table
Spo24708	0.92	Barchart \| Table
Spo06200	0.91	Barchart \| Table
Spo24707	0.90	Barchart \| Table
Spo04277	0.90	Barchart \| Table
Spo02851	0.89	Barchart \| Table
Spo04278	0.89	Barchart \| Table
Spo25555	0.87	Barchart \| Table
Spo26126	0.87	Barchart \| Table
Spo16196	0.83	Barchart \| Table
Spo25538	0.82	Barchart \| Table
Spo05875	0.82	Barchart \| Table
Spo16484	0.82	Barchart \| Table
Spo01748	0.81	Barchart \| Table
Spo16485	0.80	Barchart \| Table
Spo11904	0.80	Barchart \| Table
Spo18044	0.80	Barchart \| Table
Spo16490	0.79	Barchart \| Table
Spo08440	0.79	Barchart \| Table
Spo22572	0.78	Barchart \| Table
Spo24718	0.78	Barchart \| Table
Spo24719	0.77	Barchart \| Table
Spo26127	0.77	Barchart \| Table
Spo19560	0.77	Barchart \| Table
Spo19078	0.76	Barchart \| Table
Spo25004	0.76	Barchart \| Table
Spo00626	0.76	Barchart \| Table
Spo13957	0.75	Barchart \| Table
Spo09413	0.75	Barchart \| Table
Spo25537	0.75	Barchart \| Table
Spo19530	0.73	Barchart \| Table
Spo17923	0.72	Barchart \| Table
Spo07355	0.72	Barchart \| Table
Spo21439	0.72	Barchart \| Table
Spo21171	0.72	Barchart \| Table
Spo21946	0.71	Barchart \| Table
Spo10947	0.71	Barchart \| Table
Spo01972	0.70	Barchart \| Table
Spo06757	0.70	Barchart \| Table
Spo05412	0.69	Barchart \| Table
Spo21963	0.69	Barchart \| Table
Spo16895	0.69	Barchart \| Table
Spo06383	0.68	Barchart \| Table
Spo19561	0.68	Barchart \| Table
Spo16384	0.68	Barchart \| Table
Spo16486	0.68	Barchart \| Table
Spo24202	0.68	Barchart \| Table
Spo02203	0.68	Barchart \| Table
Spo21595	0.67	Barchart \| Table
Spo14816	0.67	Barchart \| Table
Spo13959	0.67	Barchart \| Table
Spo13053	0.67	Barchart \| Table
Spo08524	0.67	Barchart \| Table
Spo09260	0.66	Barchart \| Table
Spo16266	0.66	Barchart \| Table
Spo19975	0.66	Barchart \| Table
Spo17618	0.66	Barchart \| Table
Spo19518	0.66	Barchart \| Table
Spo03973	0.66	Barchart \| Table
Spo26526	0.66	Barchart \| Table
Spo02498	0.66	Barchart \| Table
Spo02485	0.66	Barchart \| Table
Spo18179	0.66	Barchart \| Table
Spo13874	0.66	Barchart \| Table
Spo11993	0.65	Barchart \| Table