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Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGATTAGATTAAAGGCAAATCTTTGGAATAATTGATGATCGCACAATTCAACATAACCCTTCGTTTGTCTTCCTTCTTCGTCCACATCTCCGTCTTTCTCACACCTGACACACTCTCTCTCCCCATCTTGCTCCGCCATGGCTACAATAATTCAGCATTTTCCACATCATTCTTCCTTTTTTGCAGGGCTTTCTCAATTTTTGGGGAATTAAGCTGCTGATTTTGATCAAAATCTCATCTCAGTTCTTCTGTCAGAGTGTCAGGTATTCTCAATTTGCAGATTTAATTTCTCAGTTTTCAGATTTAATTTGGCAAAATTGGCTTGTGTTTATGCTTAATTTGAAATAGTATGTTGCGGAATTTCATATTGTTGCGCCGTAATTCTGGAAAGAATCAAAATCTTGAGGGATTCGAGGATGTGGCGATAAAAAAAATCATATTCCTTGTTTTGCAGATTAGAATGGAGGTTTTAGAATGGTTGTGACATCGGACACTCTAATTTGGTGAGTTTAAAGGCATAGTAGTTACTAGCCATGACTCCGATATGTGTATTGACAAGGGTATTAACCCTTAATACATTATTTGGACTGAAATTATGAAACTTTGATAAAATAAAATAGCAGAGGCTGACGCTAGGTCATGGGTACACGAATCCGAGTAATATAGGTCTTATGATTGTTCTTGTAGGCTTGGTCAAGTCAAGTGTAGTGGTAATTGTGGATATATTTCCAGGAAGATTCAAGTTGCTGATAAACAAGTGAATGATAGTGAACCAACAACACTTGCCATTGCATTTGACACAGTATGTATTCTTATCTTTCGTTTTTTGTGAATATATTACTTAAGCGGTCGTCTTCTAAGAACGTTTTTAACATTCAGTACAGAAATTCATTGAGTTTCCATAGCCTTCTTATTTGCGAATTGTGATTGTTCTTAGTCTTGACTCGGGACTTTAATTCGTTTGCATTGGTATTTGTTGGATGAATTTGGACATTGAACTTGGAAAAGATTTATATCTATTTGGTTATTAGTTAATTTTTCTTGTACTAGTGCTAGCTCAATGTTCCACCTTCATGTTGGTATCTTAGATTATCAAGTTTGGCTTTATCGCACATCCCACTGACTCAGCACACTAGCTCAAATGTTTATTGTTTGTAGGTTGTACATTACCTATGCCTATGCTGAGACCCTTAATGCTCACCACATCATTGGCTTAGTTGTATTTATCCATTTGTTTTGTCTGCAAATATTAAGACGGAAAATATCTCAGCCTAATTATTCTCCATCTATCCCTTGATTCAGTACCAGATATGATCACGATACCGTAGTTTTCATGGGATTGCAAATTTGCAATTGATCTTAAATGTTCTAAGTTCTAACCCACCCTCCCTTTTCCCTCAAACAATTAAAACAATGCAGAGTGTTAATAACTCAAATCTTTATCATAAATTATTATCAGATAATTCAATGTTAGTTCGTATCAAAATAAATTAAAGGGATTCCCATAAATTAGGCGTATTTTGGTGGGAATAGATCTTAAGCACTACATATGTTGTGCCATATCGCATACCGTGTTTCTTCATTAACTTTACTGTTGTTTTTCATTTTTGCTCTTCCTTTGTTTTTCATTTTTGCTCTTCTGATCAAGTTCATTCTCTCTGATCTTGCTGATTTTTGACACAAGCAAAGATGGTGAATTCAGAAAATATGCTGATTGTTCTTGGAGTTATTGGTATGATCTTCTTTCCACCTCTCTAAAGTTAAATTTCTTTTCATTTTTTTGAGACTGACTTTCCTTTGTACACTAATTTTATCTATATTCTTGATTCAGTTTGATGCTACAAGCAGTTTTGTTTTCTGGCATGAAATGTTTTGAAATAAATTCGTAATTCAATTTGGTTCAGCGTCTGTATTTATATGAAAAAGGTGGTAGAACATAGCCATAGGCGATATACTTGGTTCTTTTTAAGTACTCTGTAATTTTATTTATTTAATTGCTTGAACTCAGTGGCTTATTGCAAAACATGTAATTCACTTTTTAGGTTTTCTATTGTGGAGGGGGTTTCAAAAATGGAGGTTTCCGGTATTGTGGTCTGTATATAAAAAAAAGGTGGTAAAGCATAGTATAGGCCGTATATTTGGTTCCTTTTAAGTACTTTGTAATTTTATTATTGAATTGCTTGGACTTATTTAGTGGTTTATTGCAAAACATGTATTTTGATTAATACTTTTTGTACTAACTTAATTTATTTTGACTTGTTAATTTTGCAGGAAACGTCACCTCTTTCTTCGTATTCGCCTCACTACTGTACGTTTTTTGGTTTTTAATTGATGAACGAATTTATTGATTTGCTAGTTTAGATTATTTTCGATCTCTTTAGATTCTTATACAACTTCAAAACTTTTGCAAACTTAAGGCTCATGCTATGTTTGGTAACTTTAGAAAATGGTTATCCACATCCAGATTTACCTTATCGGGGGAAATTACTTGAATTTTGATAAAGTTAACGCTCATCTATCCATAGTTCCATACAGTCCAGAAATTGAATAAAACTGGCTTAAAATTTAAAAATTATGTTGAATAATATGGGGTATCTTTTGCTAGATTTATTGGCTTTGGATGTGACCATCAACTTTTTTGATTTATATTTTTTGAATTGTTTTTTAGGCCTACAATTTGGAGAATTTGGAAGAATAAATCAGTGGACGAATTCAAATATCATCCTCTTGCTGTTGGTATAATCCACAGTATCATGTGGGTGTTCTACTCGATGCCATTTGTGCACCCACACAGCATTCCTGTTACCACCGTCAATAGTGTTGGGTTGGTTATGTATATAATCTTCAACATTATATACTACGTAAACACTAACAAAACAACGAGGGTAAGAAGAAAACGACCCTCTAATTAATTAATTAATTTTAGTTAATGTAGTTGCATTGGTAGCTAGCTTTCTGATTCCTGGTTTTGCAATTCAGAGGTCAATGGTGCTGCATTATATTGCAGAGTTTGTGTTTCTGGCTGGCTTAGTGTGGAGCACACTTGTGACTTTCGACAGCCATGCTACGAGGTCTGGCTATGTTGGGTTCTTTTGTGTCTTCTTTGGGATCATACTCTATGGTTTAGATCTCGGCATTACGGTATAAATCTTACTTCTCAATGTTTTTATGAATATACTTCCTCCGTTCTTATTTACATTACACAATTTCCTTTTAGGAAATTCCTTTTTAGTTGACACAATTCTATTATGGGAAAGTTCTGTATGGTACATTGTCATATTTACCCTCACTTTTTTTTGGTGATTTGGTGGAAGTGATGGTTGGTTGGTTGTTGTTAAGGGGCACTTTTGTCCTTTTAACTTTCTCTTTTACCTCTTCTTAATACTTCGTATGTTTCGTGTAAATAAGAATGGAGGAAGTACGTAGACTCTGTCCTTCTAGAACAAGTAGTCATAATTTATGTATTTGAATCATTAAAATCCTTTGGACTCCCAACAGGTCAAGGCCATTAGAGCAAAGAATGTAAAATCAAGGCTACTACTTTACTCCCTGGTTTGTTTTCTCAATGGACTCGTATGGAGTGCATATGCCTTAGTCAAGTACGATCCTTACATTCTGGTAATTACTTAATTCTTAATGTTTCTAATTTGTTAATTATATTATGTGATTATACTCTAATCCGTTTTCTCCCTTTGTCATGTTCATGGTACGCAGATTGAGAATAGCTTGGGCGCACTAATTGGTTGTATCCAGTTTCTTTTGTACATTGGCTACTATTGTGTAGAAAGATTCAGAACCATTAAGCTTAGTCCAGTAGATGATTGTTAATTTGGTCTAAATATTGACCAAGAGTGAGTCCAATACTATTTCGTAAGTCGGAAATGTACATATAATTACAAACCAATTTTCGCTCTTCTCCTGGGTTTTTAATCGCCTTCTTCGTTGACCAATTATGGTTCAATTCATTCTGTACTTGAATTATCTTGGGAGAATTGTACGCTACTTAAATTACTACGCATTAGTAGTAGTAATCATTGATAAGATATGTAGTACTCTTTTCGTCCCGGAATATTTGCACCGTTTTTACTGGGCAAGCTTGCCATTATACAAAGTGAATTATGTGAATATTGCAAAAAGTCAAAACGGTGCGAGTATTCCGGGATGAAACCCGACTTCGTTGTTGTGCACTTGTAGGCAATACTCGGCAAACAAGTATCCGTATTCAAATAATTCCCTA TAAGATTAGATTAAAGGCAAATCTTTGGAATAATTGATGATCGCACAATTCAACATAACCCTTCGTTTGTCTTCCTTCTTCGTCCACATCTCCGTCTTTCTCACACCTGACACACTCTCTCTCCCCATCTTGCTCCGCCATGGCTACAATAATTCAGCATTTTCCACATCATTCTTCCTTTTTTGCAGGGCTTTCTCAATTTTTGGGGAATTAAGCTGCTGATTTTGATCAAAATCTCATCTCAGTTCTTCTGTCAGAGTGTCAGATTAGAATGGAGGTTTTAGAATGGTTGTGACATCGGACACTCTAATTTGGCTTGGTCAAGTCAAGTGTAGTGGTAATTGTGGATATATTTCCAGGAAGATTCAAGTTGCTGATAAACAAGTGAATGATAGTGAACCAACAACACTTGCCATTGCATTTGACACAATGGTGAATTCAGAAAATATGCTGATTGTTCTTGGAGTTATTGGAAACGTCACCTCTTTCTTCGTATTCGCCTCACTACTGCCTACAATTTGGAGAATTTGGAAGAATAAATCAGTGGACGAATTCAAATATCATCCTCTTGCTGTTGGTATAATCCACAGTATCATGTGGGTGTTCTACTCGATGCCATTTGTGCACCCACACAGCATTCCTGTTACCACCGTCAATAGTGTTGGGTTGGTTATGTATATAATCTTCAACATTATATACTACGTAAACACTAACAAAACAACGAGGAGGTCAATGGTGCTGCATTATATTGCAGAGTTTGTGTTTCTGGCTGGCTTAGTGTGGAGCACACTTGTGACTTTCGACAGCCATGCTACGAGGTCTGGCTATGTTGGGTTCTTTTGTGTCTTCTTTGGGATCATACTCTATGGTTTAGATCTCGGCATTACGGTCAAGGCCATTAGAGCAAAGAATGTAAAATCAAGGCTACTACTTTACTCCCTGGTTTGTTTTCTCAATGGACTCGTATGGAGTGCATATGCCTTAGTCAAGTACGATCCTTACATTCTGATTGAGAATAGCTTGGGCGCACTAATTGGTTGTATCCAGTTTCTTTTGTACATTGGCTACTATTGTGTAGAAAGATTCAGAACCATTAAGCTTAGTCCAGTAGATGATTGTTAATTTGGTCTAAATATTGACCAAGAGTGAGTCCAATACTATTTCGTAAGTCGGAAATGTACATATAATTACAAACCAATTTTCGCTCTTCTCCTGGGTTTTTAATCGCCTTCTTCGTTGACCAATTATGGTTCAATTCATTCTGTACTTGAATTATCTTGGGAGAATTGTACGCTACTTAAATTACTACGCATTAGTAGTAGTAATCATTGATAAGATATGTAGTACTCTTTTCGTCCCGGAATATTTGCACCGTTTTTACTGGGCAAGCTTGCCATTATACAAAGTGAATTATGTGAATATTGCAAAAAGTCAAAACGGTGCGAGTATTCCGGGATGAAACCCGACTTCGTTGTTGTGCACTTGTAGGCAATACTCGGCAAACAAGTATCCGTATTCAAATAATTCCCTA ATGGTTGTGACATCGGACACTCTAATTTGGCTTGGTCAAGTCAAGTGTAGTGGTAATTGTGGATATATTTCCAGGAAGATTCAAGTTGCTGATAAACAAGTGAATGATAGTGAACCAACAACACTTGCCATTGCATTTGACACAATGGTGAATTCAGAAAATATGCTGATTGTTCTTGGAGTTATTGGAAACGTCACCTCTTTCTTCGTATTCGCCTCACTACTGCCTACAATTTGGAGAATTTGGAAGAATAAATCAGTGGACGAATTCAAATATCATCCTCTTGCTGTTGGTATAATCCACAGTATCATGTGGGTGTTCTACTCGATGCCATTTGTGCACCCACACAGCATTCCTGTTACCACCGTCAATAGTGTTGGGTTGGTTATGTATATAATCTTCAACATTATATACTACGTAAACACTAACAAAACAACGAGGAGGTCAATGGTGCTGCATTATATTGCAGAGTTTGTGTTTCTGGCTGGCTTAGTGTGGAGCACACTTGTGACTTTCGACAGCCATGCTACGAGGTCTGGCTATGTTGGGTTCTTTTGTGTCTTCTTTGGGATCATACTCTATGGTTTAGATCTCGGCATTACGGTCAAGGCCATTAGAGCAAAGAATGTAAAATCAAGGCTACTACTTTACTCCCTGGTTTGTTTTCTCAATGGACTCGTATGGAGTGCATATGCCTTAGTCAAGTACGATCCTTACATTCTGATTGAGAATAGCTTGGGCGCACTAATTGGTTGTATCCAGTTTCTTTTGTACATTGGCTACTATTGTGTAGAAAGATTCAGAACCATTAAGCTTAGTCCAGTAGATGATTGTTAA MVVTSDTLIWLGQVKCSGNCGYISRKIQVADKQVNDSEPTTLAIAFDTMVNSENMLIVLGVIGNVTSFFVFASLLPTIWRIWKNKSVDEFKYHPLAVGIIHSIMWVFYSMPFVHPHSIPVTTVNSVGLVMYIIFNIIYYVNTNKTTRRSMVLHYIAEFVFLAGLVWSTLVTFDSHATRSGYVGFFCVFFGIILYGLDLGITVKAIRAKNVKSRLLLYSLVCFLNGLVWSAYALVKYDPYILIENSLGALIGCIQFLLYIGYYCVERFRTIKLSPVDDC Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10727.1 vs. NCBI nr
Match: gi|902219321|gb|KNA18279.1| (hypothetical protein SOVF_072320 isoform A [Spinacia oleracea]) HSP 1 Score: 559.3 bits (1440), Expect = 3.800e-156 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1
BLAST of Spo10727.1 vs. NCBI nr
Match: gi|902219322|gb|KNA18280.1| (hypothetical protein SOVF_072320 isoform B [Spinacia oleracea]) HSP 1 Score: 516.5 bits (1329), Expect = 2.800e-143 Identity = 263/278 (94.60%), Postives = 263/278 (94.60%), Query Frame = 1
BLAST of Spo10727.1 vs. NCBI nr
Match: gi|902219324|gb|KNA18282.1| (hypothetical protein SOVF_072320 isoform D [Spinacia oleracea]) HSP 1 Score: 508.4 bits (1308), Expect = 7.700e-141 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1
BLAST of Spo10727.1 vs. NCBI nr
Match: gi|902219323|gb|KNA18281.1| (hypothetical protein SOVF_072320 isoform C [Spinacia oleracea]) HSP 1 Score: 463.0 bits (1190), Expect = 3.700e-127 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo10727.1 vs. NCBI nr
Match: gi|731361356|ref|XP_010692309.1| (PREDICTED: bidirectional sugar transporter SWEET6b-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 261.9 bits (668), Expect = 1.200e-66 Identity = 127/214 (59.35%), Postives = 161/214 (75.23%), Query Frame = 1
BLAST of Spo10727.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RH44_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_072320 PE=3 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 2.600e-156 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1
BLAST of Spo10727.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFL6_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_072320 PE=3 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 2.000e-143 Identity = 263/278 (94.60%), Postives = 263/278 (94.60%), Query Frame = 1
BLAST of Spo10727.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHG5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072320 PE=3 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 5.300e-141 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1
BLAST of Spo10727.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFL0_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_072320 PE=3 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 2.600e-127 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo10727.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R724_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_099220 PE=3 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.400e-56 Identity = 114/214 (53.27%), Postives = 152/214 (71.03%), Query Frame = 1
BLAST of Spo10727.1 vs. ExPASy Swiss-Prot
Match: SWT6B_ORYSI (Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. indica GN=SWEET6B PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 9.600e-43 Identity = 91/214 (42.52%), Postives = 133/214 (62.15%), Query Frame = 1
BLAST of Spo10727.1 vs. ExPASy Swiss-Prot
Match: SWT6B_ORYSJ (Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. japonica GN=SWEET6B PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.600e-42 Identity = 89/214 (41.59%), Postives = 133/214 (62.15%), Query Frame = 1
BLAST of Spo10727.1 vs. ExPASy Swiss-Prot
Match: SWT6A_ORYSJ (Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. japonica GN=SWEET6A PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 4.800e-42 Identity = 90/214 (42.06%), Postives = 132/214 (61.68%), Query Frame = 1
BLAST of Spo10727.1 vs. ExPASy Swiss-Prot
Match: SWT6A_ORYSI (Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. indica GN=SWEET6A PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 4.800e-42 Identity = 90/214 (42.06%), Postives = 132/214 (61.68%), Query Frame = 1
BLAST of Spo10727.1 vs. ExPASy Swiss-Prot
Match: SWET5_ARATH (Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana GN=SWEET5 PE=1 SV=2) HSP 1 Score: 169.5 bits (428), Expect = 5.300e-41 Identity = 82/214 (38.32%), Postives = 128/214 (59.81%), Query Frame = 1
BLAST of Spo10727.1 vs. TAIR (Arabidopsis)
Match: AT5G62850.1 (Nodulin MtN3 family protein) HSP 1 Score: 169.5 bits (428), Expect = 3.000e-42 Identity = 82/214 (38.32%), Postives = 128/214 (59.81%), Query Frame = 1
BLAST of Spo10727.1 vs. TAIR (Arabidopsis)
Match: AT3G28007.1 (Nodulin MtN3 family protein) HSP 1 Score: 159.1 bits (401), Expect = 4.000e-39 Identity = 88/229 (38.43%), Postives = 130/229 (56.77%), Query Frame = 1
BLAST of Spo10727.1 vs. TAIR (Arabidopsis)
Match: AT5G40260.1 (Nodulin MtN3 family protein) HSP 1 Score: 153.3 bits (386), Expect = 2.200e-37 Identity = 82/232 (35.34%), Postives = 133/232 (57.33%), Query Frame = 1
BLAST of Spo10727.1 vs. TAIR (Arabidopsis)
Match: AT4G15920.1 (Nodulin MtN3 family protein) HSP 1 Score: 104.4 bits (259), Expect = 1.200e-22 Identity = 63/201 (31.34%), Postives = 102/201 (50.75%), Query Frame = 1
BLAST of Spo10727.1 vs. TAIR (Arabidopsis)
Match: AT3G16690.1 (Nodulin MtN3 family protein) HSP 1 Score: 104.0 bits (258), Expect = 1.500e-22 Identity = 65/204 (31.86%), Postives = 103/204 (50.49%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10727.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10727.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10727.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo10727.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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