Spo10775 (gene)

Overview
NameSpo10775
Typegene
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L34
Locationchr1 : 41402134 .. 41404640 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATCCTTGAGAAAAAGAAATGCAAAAGCCATAAACCGCAATCCACAATCCACAATCCAAGCAGCCCATGACTTCAAAGACTACTGTATGTGGTACCAAACCAAACCCAGCAACAAAACCCAAAATCACAAGATCGGGCCGGGTAGAGACATAACAGCCGTCAGATCTAGGGTAAAATAAGAACACTTCCCCCAATCCTTTATATCACGACCTCCAAACCTTCACAAACCCCTTCTTTCGCTTCACCCCCAAAACTAGAGGAGAGAGAAAACTCGCAGAGAGAAAATGGTGCAGAGGCTTACTTACCGTAGAAGGCATAGCTATGCCACTAAATCTAACCAGCATCGCATCGTCAAAACTCCTGGTATTTTCCCATTTCTCTCTCTTTTTATTTTTTTTATTTTTTATTAATGTGATTTCTTTCATTTAGGGTTTTTGATTGGTAATGGTTTTTGGTGTTTGTTTTAATGGCGGCGGGATGAATAGGTGGGAAGCTAGTCTACCAGACTACCAAGAAGAGGGCTAGCGGTCCTAAATGTCCTGTTACTGGCAAGAGAATCCAAGGGGTAACTTTCCTACATTTTACTATTCGTCTTTCCCCAATTCGTTTTGAATAACTTATCGATGTAATTTGTTAAGTTTATGATTTTTTTTTTGAGGGAATTGTTAAGTTTATGATTGTTATTTTAAGTAGAAATTTAGGTTTTTATTGTTATACTAATTATATTAATCATTTCTGGAAATTCAAAACAAGATGCTAAACCACGATTTGATTGTTAATGGTACCATTGTTTAATGATCCAGTAAACTGTGTTCATCTTTGTTTATTTATTGAGGATGGTTAAATTATCACGTTCATTCTCGTTGTTGTGAAATGTGCTCTGATTGAGATGAGTTTTCGCTTCATGGCTGATTTTGGGATTTAAGTTTTAAGACACATAATTAAACAATGTAATTGTAATGTCAATCTTTATAATGTGTTAACGAAAGTTGAAGGTGTTTAGCTTTCAAAAGCTGCCCAATGATGGAAAATCATAATTATTGAGTGGTTGCATATGGTGTTTTGTCATTAGGCTTTTCTCACCACCACCTTTCCCCTTTTATCTTTCCATCTATATCACATTTCACATTCTCATCATTCATACAATCATTTTACACTACATTACTACTTATACTACATGGTGGTGGAAAAGGCCTCTTGACTGAATCCGTATGCTCATAGCCACAGATGATACGTTAAAAGCTATGAGATCTGAGGGCATTAAATTCCTTGTATCAAAAATGGGATTTTGTTAAAAGTTCTATTAATGCATTTCTGATTTTCTCGTATGCCTGTTCATTGTTAAAGTTTAACTACTGCATTAAATCCATGAAGAATATTGTTGTGGTTGTGTGATTTTGATTCGAACAGTCTGCATTATAGTTGATCCAATTTTTTTAAAATATTTTGTGTGTACAATGTGTATTTTGGCAATATTTTTTTCTCCTGTGAGCTCATATTATGTGTATAACACTACTGTTGATGCTAGTTTTCAACTTTAATGTCTTCTCCTATGACATTGTTAGTTTTCAACTTGAATGTCATCTCTGGAATTACTGGTGGGATTTTATCTCTGCATTTGTTACTCAAGCACCGCCCAATGATGGAAATCTATATACTTAGAGCAGTTGCATATGGTTGCCTTTCACAATTAGTCTTTACGGGCCACCATCTTCACTCTCTCTATCTATCTATCTATACATCTCTCTCTCTCTCAACTTATTCCACTCTTTCATCCATCTATTATGATGGTGGTTTAGTAAATGCCTTTTGTGATTGCCCTGTGCCTGAACTGCACATGATTTATTAAAGCTATGAGATCTGAGGGCTTCTGACCAGTAGTGCAATGGAAGATTGTTTGTTTTGTACCTTGTGGATTTAGTTAGATGTCTTTTTTTTAATAAATTTGCTTTCCTTTCACATTTTTTAATCTAGTTTTGAACTGTTATGTTAAGTGTTGTTCTTTGATTCAGCAAGCTCAAGGATATATGCCTCTTGAAAGATTCTTCATAGATTTGTTTCCAATTTATGGTTATCATAAAAATTCTCTGTTCAGTGGCCATTGCACTAGTGAATTATTGTCATTGTCGGACGATTTCTGAATGAATATTCTGTTTGTCCTTGTTACTGTATTCACTCTTCAACATTTTCGAATTTATTTGCAGATTCCTCACTTGAGACCCACCGAATACAAGAGGTCAAGGTTGCCTAGGAACAGAAGGACTGTGAACCGTCCTTATGGTGGAGTTCTGTCCGGTAGTGCTGTTAGAGAGCGGTATGCTTCTCCTTGTCCTTTATCTTTCAAAATATTCCTTGTTTGTGTGGGTAGTGTGTGGTGATTGAATGATTGAATATTTGTTGAAAATATTGCAGGATCATAAGAGCATTCCTCATTGAAGAGCAAAAGATTGTGAAGAAGGTTTTGAAGATCCAAAAAGCCAAGGAAAAGGTGGCTGGAAAGAGTTGA

mRNA sequence

TTATCCTTGAGAAAAAGAAATGCAAAAGCCATAAACCGCAATCCACAATCCACAATCCAAGCAGCCCATGACTTCAAAGACTACTGTATGTGGTACCAAACCAAACCCAGCAACAAAACCCAAAATCACAAGATCGGGCCGGGTAGAGACATAACAGCCGTCAGATCTAGGGTAAAATAAGAACACTTCCCCCAATCCTTTATATCACGACCTCCAAACCTTCACAAACCCCTTCTTTCGCTTCACCCCCAAAACTAGAGGAGAGAGAAAACTCGCAGAGAGAAAATGGTGCAGAGGCTTACTTACCGTAGAAGGCATAGCTATGCCACTAAATCTAACCAGCATCGCATCGTCAAAACTCCTGGTGGGAAGCTAGTCTACCAGACTACCAAGAAGAGGGCTAGCGGTCCTAAATGTCCTGTTACTGGCAAGAGAATCCAAGGGATTCCTCACTTGAGACCCACCGAATACAAGAGGTCAAGGTTGCCTAGGAACAGAAGGACTGTGAACCGTCCTTATGGTGGAGTTCTGTCCGGTAGTGCTGTTAGAGAGCGGATCATAAGAGCATTCCTCATTGAAGAGCAAAAGATTGTGAAGAAGGTTTTGAAGATCCAAAAAGCCAAGGAAAAGGTGGCTGGAAAGAGTTGA

Coding sequence (CDS)

ATGGTGCAGAGGCTTACTTACCGTAGAAGGCATAGCTATGCCACTAAATCTAACCAGCATCGCATCGTCAAAACTCCTGGTGGGAAGCTAGTCTACCAGACTACCAAGAAGAGGGCTAGCGGTCCTAAATGTCCTGTTACTGGCAAGAGAATCCAAGGGATTCCTCACTTGAGACCCACCGAATACAAGAGGTCAAGGTTGCCTAGGAACAGAAGGACTGTGAACCGTCCTTATGGTGGAGTTCTGTCCGGTAGTGCTGTTAGAGAGCGGATCATAAGAGCATTCCTCATTGAAGAGCAAAAGATTGTGAAGAAGGTTTTGAAGATCCAAAAAGCCAAGGAAAAGGTGGCTGGAAAGAGTTGA

Protein sequence

MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10775.1Spo10775.1mRNA


Homology
[Close]
BLAST of Spo10775.1 vs. NCBI nr
Match: gi|902232968|gb|KNA22879.1| (hypothetical protein SOVF_029870 [Spinacia oleracea])

HSP 1 Score: 232.3 bits (591), Expect = 4.600e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS
Sbjct: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
[Close]
BLAST of Spo10775.1 vs. NCBI nr
Match: gi|731344027|ref|XP_010683191.1| (PREDICTED: 60S ribosomal protein L34 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 228.0 bits (580), Expect = 8.600e-57
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFL+EEQKIVKKVLKIQK KEK AGKS
Sbjct: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAGKS 120
[Close]
BLAST of Spo10775.1 vs. NCBI nr
Match: gi|731363081|ref|XP_010693235.1| (PREDICTED: 60S ribosomal protein L34 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 226.9 bits (577), Expect = 1.900e-56
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYR+RHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFL+EEQKIVKKVLKIQK KEK AGKS
Sbjct: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAGKS 120
[Close]
BLAST of Spo10775.1 vs. NCBI nr
Match: gi|357486949|ref|XP_003613762.1| (60S ribosomal L34-like protein [Medicago truncatula])

HSP 1 Score: 223.4 bits (568), Expect = 2.100e-55
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNR YGGVLSG AVRERIIRAFL+EEQKIVKKVLKIQKAKEKVA K+
Sbjct: 61  EYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKVASKA 120
[Close]
BLAST of Spo10775.1 vs. NCBI nr
Match: gi|731335043|ref|XP_010678528.1| (PREDICTED: 60S ribosomal protein L34-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 223.4 bits (568), Expect = 2.100e-55
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHRIVKTPGG+LVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGRLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFL+EEQKIVKKVLKIQK KEK + KS
Sbjct: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQSSKS 120
[Close]
BLAST of Spo10775.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVD6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_029870 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.200e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS
Sbjct: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
[Close]
BLAST of Spo10775.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4E0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153960 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.000e-57
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFL+EEQKIVKKVLKIQK KEK AGKS
Sbjct: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAGKS 120
[Close]
BLAST of Spo10775.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGP5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g046660 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.300e-56
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYR+RHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFL+EEQKIVKKVLKIQK KEK AGKS
Sbjct: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAGKS 120
[Close]
BLAST of Spo10775.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAN2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g114840 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.500e-55
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHRIVKTPGG+LVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGRLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFL+EEQKIVKKVLKIQK KEK + KS
Sbjct: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQSSKS 120
[Close]
BLAST of Spo10775.1 vs. UniProtKB/TrEMBL
Match: G7KF74_MEDTR (60S ribosomal L34-like protein OS=Medicago truncatula GN=MTR_5g040570 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.500e-55
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRLPRNRRTVNR YGGVLSG AVRERIIRAFL+EEQKIVKKVLKIQKAKEKVA K+
Sbjct: 61  EYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKVASKA 120
[Close]
BLAST of Spo10775.1 vs. ExPASy Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.300e-56
Identity = 111/120 (92.50%), Postives = 117/120 (97.50%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYR+RHSYATKSNQHR+VKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRL RNRRTVNR YGGVLSGSAVRERIIRAFL+EEQKIVKKVLKIQKAKEK+A KS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
[Close]
BLAST of Spo10775.1 vs. ExPASy Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.600e-55
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRLTYRRRHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRL RNRRTVNR YGGVLSG AVRERIIRAFL+EEQKIVKKVLKIQK KEK A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAKN 120
[Close]
BLAST of Spo10775.1 vs. ExPASy Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.700e-55
Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRL YR RHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRL RNRRTVNR YGGVLSGSAVRERIIRAFL+EEQKIVKKVLK+QKAKEKVA K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120
[Close]
BLAST of Spo10775.1 vs. ExPASy Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.200e-55
Identity = 111/119 (93.28%), Postives = 113/119 (94.96%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRL YR RHSYATKSNQHRIVKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGK 120
           EYKRSRL RNRRTVNR YGGVLSGSAVRERIIRAFL+EEQKIVKKVLK+QKAKEKVA K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119
[Close]
BLAST of Spo10775.1 vs. ExPASy Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.200e-52
Identity = 106/120 (88.33%), Postives = 109/120 (90.83%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRL YR RHSYATKSNQHRIVKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRL RN RTVNR YGGVLSG AVRERI+RAFL+EEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120
[Close]
BLAST of Spo10775.1 vs. TAIR (Arabidopsis)
Match: AT1G26880.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 214.9 bits (546), Expect = 2.700e-56
Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRL YR RHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRL RNRRTVNR YGGVLSGSAVRERIIRAFL+EEQKIVKKVLK+QKAKEKVA K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120
[Close]
BLAST of Spo10775.1 vs. TAIR (Arabidopsis)
Match: AT1G69620.1 (ribosomal protein L34)

HSP 1 Score: 214.5 bits (545), Expect = 3.500e-56
Identity = 111/119 (93.28%), Postives = 113/119 (94.96%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRL YR RHSYATKSNQHRIVKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRPT
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGK 120
           EYKRSRL RNRRTVNR YGGVLSGSAVRERIIRAFL+EEQKIVKKVLK+QKAKEKVA K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119
[Close]
BLAST of Spo10775.1 vs. TAIR (Arabidopsis)
Match: AT3G28900.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.200e-53
Identity = 106/120 (88.33%), Postives = 109/120 (90.83%), Query Frame = 1 

		  

Query: 1   MVQRLTYRRRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
           MVQRL YR RHSYATKSNQHRIVKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLPRNRRTVNRPYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKAKEKVAGKS 120
           EYKRSRL RN RTVNR YGGVLSG AVRERI+RAFL+EEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120
The following BLAST results are available for this feature:
BLAST of Spo10775.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902232968|gb|KNA22879.1|4.6e-58100.hypothetical protein SOVF_0298... [more]
gi|731344027|ref|XP_010683191.1|8.6e-5797.5PREDICTED: 60S ribosomal prote... [more]
gi|731363081|ref|XP_010693235.1|1.9e-5696.6PREDICTED: 60S ribosomal prote... [more]
gi|357486949|ref|XP_003613762.1|2.1e-5595.060S ribosomal L34-like protein... [more]
gi|731335043|ref|XP_010678528.1|2.1e-5595.0PREDICTED: 60S ribosomal prote... [more]
back to top
BLAST of Spo10775.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RVD6_SPIOL3.2e-58100.Uncharacterized protein OS=Spi... [more]
A0A0J8C4E0_BETVU6.0e-5797.5Uncharacterized protein OS=Bet... [more]
A0A0J8BGP5_BETVU1.3e-5696.6Uncharacterized protein OS=Bet... [more]
A0A0J8CAN2_BETVU1.5e-5595.0Uncharacterized protein OS=Bet... [more]
G7KF74_MEDTR1.5e-5595.060S ribosomal L34-like protein... [more]
back to top
BLAST of Spo10775.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL34_TOBAC3.3e-5692.560S ribosomal protein L34 OS=N... [more]
RL34_PEA1.6e-5592.560S ribosomal protein L34 OS=P... [more]
RL341_ARATH4.7e-5592.560S ribosomal protein L34-1 OS... [more]
RL342_ARATH6.2e-5593.260S ribosomal protein L34-2 OS... [more]
RL343_ARATH2.2e-5288.360S ribosomal protein L34-3 OS... [more]
back to top
BLAST of Spo10775.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G26880.12.7e-5692.5Ribosomal protein L34e superfa... [more]
AT1G69620.13.5e-5693.2ribosomal protein L34[more]
AT3G28900.11.2e-5388.3Ribosomal protein L34e superfa... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 13..26
score: 2.2E-29coord: 66..88
score: 2.2E-29coord: 44..54
score: 2.2E-29coord: 26..43
score: 2.2
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 1..120
score: 4.6
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 1..96
score: 8.8
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 15..28
scor
NoneNo IPR availablePANTHERPTHR10759:SF13SUBFAMILY NOT NAMEDcoord: 1..120
score: 4.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0001510 RNA methylation
biological_process GO:0006412 translation
biological_process GO:0009451 RNA modification
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0007229 integrin-mediated signaling pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0009966 regulation of signal transduction
biological_process GO:0042545 cell wall modification
biological_process GO:0009733 response to auxin
biological_process GO:0010200 response to chitin
biological_process GO:0009723 response to ethylene
biological_process GO:0009414 response to water deprivation
biological_process GO:0009611 response to wounding
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0043087 regulation of GTPase activity
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0006397 mRNA processing
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0007219 Notch signaling pathway
biological_process GO:0006544 glycine metabolic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0016310 phosphorylation
biological_process GO:0009088 threonine biosynthetic process
biological_process GO:0015886 heme transport
biological_process GO:0006007 glucose catabolic process
biological_process GO:0051301 cell division
biological_process GO:0006897 endocytosis
biological_process GO:0009790 embryo development
biological_process GO:0006563 L-serine metabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0005622 intracellular
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0005634 nucleus
cellular_component GO:0009524 phragmoplast
cellular_component GO:0009523 photosystem II
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005618 cell wall
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0015439 heme-transporting ATPase activity
molecular_function GO:0004072 aspartate kinase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004712 protein serine/threonine/tyrosine kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo068160.75Barchart | Table
Spo144380.75Barchart | Table
Spo241060.75Barchart | Table
Spo019290.74Barchart | Table
Spo020850.73Barchart | Table
Spo137060.72Barchart | Table
Spo036540.71Barchart | Table
Spo188930.71Barchart | Table
Spo098030.70Barchart | Table
Spo247120.70Barchart | Table
Spo123220.69Barchart | Table
Spo166520.69Barchart | Table
Spo132020.69Barchart | Table
Spo237510.69Barchart | Table
Spo021750.69Barchart | Table
Spo206860.69Barchart | Table
Spo128940.68Barchart | Table
Spo119620.68Barchart | Table
Spo128490.68Barchart | Table
Spo030240.68Barchart | Table
Spo185750.68Barchart | Table
Spo085460.68Barchart | Table
Spo117330.68Barchart | Table
Spo148560.67Barchart | Table
Spo029330.67Barchart | Table
Spo049230.67Barchart | Table
Spo082720.67Barchart | Table
Spo126630.67Barchart | Table
Spo174650.67Barchart | Table
Spo236640.67Barchart | Table
Spo246070.67Barchart | Table
Spo259170.67Barchart | Table
Spo113390.66Barchart | Table
Spo101560.66Barchart | Table
Spo090900.66Barchart | Table
Spo004730.66Barchart | Table
Spo160490.66Barchart | Table
Spo085890.66Barchart | Table
Spo247520.66Barchart | Table
Spo179360.66Barchart | Table
Spo217840.66Barchart | Table
Spo251290.66Barchart | Table
Spo024520.66Barchart | Table
Spo021070.66Barchart | Table
Spo121760.66Barchart | Table
Spo005700.66Barchart | Table
Spo131840.66Barchart | Table
Spo067320.66Barchart | Table
Spo061460.66Barchart | Table
Spo217290.66Barchart | Table
Spo180500.65Barchart | Table
Spo262660.65Barchart | Table
Spo237160.65Barchart | Table
Spo036080.65Barchart | Table
Spo213510.65Barchart | Table
Spo121620.65Barchart | Table
Spo116230.65Barchart | Table