Spo10820 (gene) | SpinachBase

Overview


Name	Spo10820
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Thioredoxin superfamily protein
Location	SpoScf_00206 : 118191 .. 124250 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGATGGGATGTCGTCGGAAAAAGTATGTGGATGTCGTCGGAAGATGGCCTTGGAGTGGCCTCTCGGAAACGGAAAGTTGAAGGGAGGTGGGGTAAATTATGAAAGGAGGCGGGGTAACTTATATAAGGGTAGAACCATATTTTCACCATAAATACGCAGACGTTTTAAGCGTATGCGGACGTCGAATACTTTTAGAAAGTGGAAATATGATTTTGTTAAAAGTTTATACTATGTATTTCGTTTCATGTATCATGTTGACTTTAATGTAATCAAATATAATAGTGTAAAAAGTTATTACCGGTAGTTTCATACTACCTTTGTTTCAAAAGATTTTTACACTTATTATTTGCACAAATTCCAATGCAATATTTGACCGCTAATATATCTAATCATGTACGATAACAAATTATAAAAAGTTGATATTTACAAAATACATTTTGAGACGAATCTAACAAGATATCTCGTGATAATTTTTGGTAGATATACTAGTAAAACTTTATACGGAGTAGTCAAAGTTAGATTATTAAATTCATTTCTCAAAGCCTAAAGAATTTAATGAAACGGAGGCGGTACAACCTAAACCTAAATAGGTAGAAAATTGTGCGAAGTAGGTAGACTTAGGCAGGCGGTGCCGAGAAGGCGGAGATAGAGATTGGATAAAGATGTTAGTGACAACAAGGACAATCGGAGGAATGCAATGGTCTGTGTCGTCACTAAGCAAGAGGCGGTTGTTGAGTTGTTCATCTTCAGCAGCAGTGAAATCCAGAAAGCTGATTCTTTATTCAAAACCGGGCTGCTGTTTGTGTGATGGCCTCAAAGAAAAGCTATCCGCCGCCTTTTCTCTGTCTTCACCTACGGATCCCCTCCACGAAGTCGACTTGCAGGTGATTTTCATTTCATTTGTTCATTTATGGCTTTCTCGTTCTATCACTTGCGTATTCTTCAATTGAATTGAATTGAATTGTAATCGAAATTGAATTGAATTGAACTTAATTTAATTCTACTTTTAATAGATAAGAGATATCACGACAAATCCAGATTGGGAGAGGGCTTACCAGTACGAGATTCCTGTTTTGGCTAAATTACTTACAGATGGTACCGAGGTCTGTTTTCTTTTTCAAGCTGCAATTTTATTAAACCCTAACTTTGACGAATTCACACCTAAATCCTGTGGAATTACTTTCAACTAATGACAATGATGTTACAAACTTGAATTTGCCTCCATTTTTCACTAAGAATTTGTTTAATTAAGTAATGCGATGTTCTGATTTCTGAGTAATGAGTTATCATGTTATATCAATCTTTAGTCTTTCTCTTTCCCTGTCTCCAGCATCACAATTTACTACCCCAACAGGCTCTTCCACCTTCCCCCTTGGTTCATTCCTTCCTTTAGCAGGCTGTCTTCACACTTCCTTTTTCAATTTCTGCACTTACCTAACTATCTCCATGGGATGTTCCACATCCCCCTCCTACTTCTTCTTATGTGCTCTCCTAGTAGCTGAAGTTGACATTACTTGCTTCCCTAGGCTTTGATTATTTGGTAAAAAACACTTGAGCTTCAGCATTTGAGAATCCTCGTTGCAATCTTGTACAACTCGAGCAGTTGGCACTATTTTACGAGTAGCTCATGGAGTGTGGTCCCTTCTGGACTTCGATTCTGACATAGGCATTCTAAAAAAATTCACGCCTTTATCTAAGATAATTTCATTCTTACCCCAAAGGAAACTGTAATAACAGGGTGCTGGTGGGCATTTTTTTTGGTTTAAGTAAGCTTAAGATGTATTGTAACCCCAAATACCAGATTTACAGCCTAATCATCTCAAATGGGAAAAACACCTAGTAAGCACTACAAGCACACCAATCAGACAACTACTTACAATATATTTATCTCTATTGCTATCTTTTGCGTCATGAGACTATGAATTCTATACACGTATCATCTATAATTTTCTTTACAGTTGTATCTTCACTTGGAACTTTAAAATTCTGAACAACATCATCTATTGCATTACAGATGTGATAAACAATAACTTAAAAACTTGTACTGCGTACCCCTCTTCTAAACTTATTTCCATTGTGCTTGTTCTTGATCTATCTAAAGATGCCATTGGATAGCAGTTAAAAAAAAAAGAGGTGTTTGAGGGTTTCAGGGCTGCCACCACGTATCATGCGTAAATTGTGAGACGTTCTTGTAAAGTAGTTCTTTTAGTAGTAGCCTAAACTGAAAAGCGGACCATGCTATGTGCTTATGCTTTGGGATAGCCAATCTTTGCCAAACCACCTTGTCCCAACCACTGTATAAAAAGGTGCGCCCGAGGCGCAAGGCGTTTGGTGCCAGCGCCTTTTGTAGTCTAGGTGAGACGATTTTGATAAGGCGCACAAAGGCGCACAAAGGTGTTTTCCGGTGAACACCAGTCCATTCTCCTTCTTCTTTGTCGTTCTCTTGCTCTGCTTTTTCCCTGAACTTTGAGCAAACCAGATTGAGTGTCCATAATTTTTGCAATAAATGCAGAAAAAATGACATTTTGGGCTAATACTGCTGCTTAGTTTTGCCCATCCACACAAATTCCGGGAATTTTTCTCCCATTTTCACTTGAACTAGCATCCTTGCATATATGACTCTGTCTCGTGATTGAGTTCTTATATATCAAGGTTTACTAGTTTACCAAGATTGTTACCAGCTGTTTCCAGAGTTGAATGGTCATGTAGTTCGATGGGAAGCTCTGGCAGCGTGAGCCAGATTGTTGCCGTGTCTATCTGGTCTTCCGATGGTTTGTGCAGGTGGAGTGGAAATCCGTCTACGAGCCATGGACCTTGACTGTAGGCTGAAGTCATTAGGATTGGCAAAGGTTATAAAAAAATACCCCTTACCCAGGAGTAGTAGTTCCCATGAACCCACATTCTTAAAGGTTCTCTTGGTCTTTTAGGAAGTGGAAGGAGAAGGATATCCCAACAACTTTCCCTATGAGTGATGCTCTTCATGGCTGACAAAGCTTTTTGCACTCTTCTTCATCAAGGGGGGATGAACAAATCCTTTGGTTGTGCTTCGATAAGGGGGGTGAGACGAAAGGAAGGTTATAGGATTGATGACCTTGATTTGTTTCTGTTTTTGGGATTGAAGAGGCTTTGAGACTCGAGTTTGCGGCGACGTTGACCGAGAAGATTTCCCTGGTTGGCGTCGTGGTGACTTAGGTAGAGATGTTTCTACTTTGCGGTCAGAAGAGGTAAGAGTCCTTCATATGCCAAAAACTCCCATGCCTTTCTTGGTAGGAAAATAAAACCAGCTGGCGATTCAATTTCCTACATGTTATGCGAACATGCACCTTAAGTCCCTTTTGCCGAGGCATAAAGCAAATAATAGAAAACCAATAAATGTACAAATTAAACGCTACCTAAGTTTTAAGATTAAATATTCCAGCATAATCCTCAATTTTATTTATTTGTATTTTTTTTTATAGTTGCATGACCGTCAATTAATTGCATGTAATGGCTCTAATTTCAACCATAGATCAAAACCCCAATTTAGAGACGAACTTCAGCTAGTAATTTAATCGATTCCTTTATTTTCATATAGGGTTTAGGGTTTATTTTCCTATATATATAGTGTCCTTTGTTCTTGATCTATACCACAATTAGGGTCATATTTGTAAGATAATGAGGAAATTGTGTTAAAAATTTGTCCTTAATAGTGTTCTCTAATCGAGTTTTAATTTGAATACGACTTGTGTGTTTCTCTTACAACTCATTAGGGACTTCTATTAATGACCTTATTCAGGAAATTCATACATCAATACCACATACAAGTATACAACGTTCATTGACTCGACCTCTAGAAGTTCTTCACGAGGAAGGGACCTTGTGCCGTTGTGCGCCTACTCACACTCTTCCCATAATCCCATTACTAGTCTTAGTTTTCTTGTCCTTAGCATCAATTGGACCTTCATTTAGAAGATATTTGGTGTGCAACCTATGTAATCCTCTCCCTCCTAGTTTCGTACTACTCTTAGGCCTTGTTCTCTTCAACTTGTAGAACTTTATTTAAATAAGTTTCAGGTCCTATAAATTCAGATAAGTTTCTATAAGTTAAATGGTCCGAGTGTTTTGACACCGGATCGTGCGGCGCGCTCTTGCCCATGGGGCGGCAAGGGCGCAAGCCTGGTGCGGAAAGTGAATCTCAAGGCTCGGGGCACGAGCGAGTGTTTGCTTCAGAATGGGCACTCTTGCCTATTGACGACAAGAGCGAGGGTCGAGGGTCGAACGGGACGCTTGTGTGCACAGCAGGCACCAGCGGGACCGTCGACGAGAATGTATCTGCTTTGAGGGGGATTTTGTTGGGTCTTAGAAAACTTAAAAACATGCGACAACACAATATCTATAAAGGCTAGCAACAACGCAAGTAATTAAGCAAAGACAACTTCTGGTGAGGGGTATTGGTTAAGATCTTATAAGTTAAATAAGGTCCTATAAGATCTTATAAGTTAAATAAGTTCCTATAAGTTCCAATAATTAATAAAATATGTAATATTATGATTATTTGCGTTGTTATATTAAATAAATCATATTTATATTTATATAATTATATTAAAATAATTTGTGGTTACTAGTTGACGATAATAATTATCAATGACACGTAATTATTAATTAATATGTTATTATTAATTACTATCAATATAATTATACGGGATAAAATTAATACACACTTTTAAAATTATGTGTACATCACAAATCAATGGACGAGTTTTTTGGTGAGGCGCAAATAATCACAATGTTACTCCTTACATCAAAGCATCAATTGAAAGTAATAACTTCCGACTTACATTTTTTCAGCGGGACATGTGACTTGTGAGATACTCGTAGGGAGTATCAAATAGTTGTTTTCCGTACGTGATAAAGTTCCATTACGGAATATAAATATTTTACAAACTGGTCGAATTTGTATTTGGATTTTATAAATTTTGAATAATTATGAAGGAGTAATAATTTATATTATAAATAATAACACAAAAGACATAAATTATTAATATAAGAACTAAATAATAATTACTTTATTAATTTATTAGTGTTTGCAATCAACTATTATCAATATTCTAATGGCTAAAAGTTTAGTAATAATCTAATAAACTTTAAATAAAGTCTTATAAGGTTCAATAAGGTCTAATAGGGTTCAGTAAGATCTTATAAGGTTCTATGAGGTCTAATAAGGTCCAATGAGATTCTATAAGGTCATATAAGTTAAGTCCAGTTCAGATAAGTTGAGTTCAGCTAAGTTCAGATAATTTCAGGTTGTATAAGTTGAAGAGAACACACCCTTTCTCTTATACACACTTAATTTTGTTAATTGTTATCATCACCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTCTTCATAGCTTCTTACCTCCTTAGATGACTTTCATTTCAACCGTAGAATTGGTGGATTTTATTTTTACCTTTCACCTTCGGCTCTTCCGTTCTGTTGCCACTAATGAATTGACCTTTATTTCAACTTATCATCTATTCGGCTGGAGATCTTGGAAATCCTATAAATTTAAAAACTCTTGTATATTATTAGATTTGGTAGTTTGGAAAAGGAAAGCACTAATTGTTATTCCCTGAAAATCAGTAATGTGAAAATAGATGGATAACCACCTAAAATTTGGTTTATATTGCTCTTGGTTCTTTTGTAAGGTTTGTACTTTGTACCCCCAATAACATCTTTGACATTCTTTTTAAGGAGGAATCCCCTTTCTTCTTCTTCCGAGGCCTGTATCGTAGTATAGTACAAACAAATTTTCCTTCACATTAACATTAACATGTGTGTGATCGACTTCTAATAGTTCTGTTTCTTATGCAGGAAACACTACCTAGATTATCTCCCCGCCTCGGTGTTGAGGTCATTCGACAGAAATTAGTTGATGCTTTCAGATTGTAACAATGTTTAGGATGCTTGGCATTCGGAAGCTATAAAAAATACGAAGTATCATTTACTTCTGATTTTAACAAGTATCTTTTTGTTTACCTCAACTTGCATGCTATTATCCCGTTTGAATAG

mRNA sequence

ATGGTGGATGGGATGTCGTCGGAAAAAGTATGTGGATGTCGTCGGAAGATGGCCTTGGAGTGGCCTCTCGGAAACGGAAAGTTGAAGGGAGGTGGGGTAGACTTAGGCAGGCGGTGCCGAGAAGGCGGAGATAGAGATTGGATAAAGATGTTAGTGACAACAAGGACAATCGGAGGAATGCAATGGTCTGTGTCGTCACTAAGCAAGAGGCGGTTGTTGAGTTGTTCATCTTCAGCAGCAGTGAAATCCAGAAAGCTGATTCTTTATTCAAAACCGGGCTGCTGTTTGTGTGATGGCCTCAAAGAAAAGCTATCCGCCGCCTTTTCTCTGTCTTCACCTACGGATCCCCTCCACGAAGTCGACTTGCAGATAAGAGATATCACGACAAATCCAGATTGGGAGAGGGCTTACCAGTACGAGATTCCTGTTTTGGCTAAATTACTTACAGATGGTACCGAGGAAACACTACCTAGATTATCTCCCCGCCTCGGATGCTTGGCATTCGGAAGCTATAAAAAATACGAAGTATCATTTACTTCTGATTTTAACAAGTATCTTTTTGTTTACCTCAACTTGCATGCTATTATCCCGTTTGAATAG

Coding sequence (CDS)

ATGGTGGATGGGATGTCGTCGGAAAAAGTATGTGGATGTCGTCGGAAGATGGCCTTGGAGTGGCCTCTCGGAAACGGAAAGTTGAAGGGAGGTGGGGTAGACTTAGGCAGGCGGTGCCGAGAAGGCGGAGATAGAGATTGGATAAAGATGTTAGTGACAACAAGGACAATCGGAGGAATGCAATGGTCTGTGTCGTCACTAAGCAAGAGGCGGTTGTTGAGTTGTTCATCTTCAGCAGCAGTGAAATCCAGAAAGCTGATTCTTTATTCAAAACCGGGCTGCTGTTTGTGTGATGGCCTCAAAGAAAAGCTATCCGCCGCCTTTTCTCTGTCTTCACCTACGGATCCCCTCCACGAAGTCGACTTGCAGATAAGAGATATCACGACAAATCCAGATTGGGAGAGGGCTTACCAGTACGAGATTCCTGTTTTGGCTAAATTACTTACAGATGGTACCGAGGAAACACTACCTAGATTATCTCCCCGCCTCGGATGCTTGGCATTCGGAAGCTATAAAAAATACGAAGTATCATTTACTTCTGATTTTAACAAGTATCTTTTTGTTTACCTCAACTTGCATGCTATTATCCCGTTTGAATAG

Protein sequence

MVDGMSSEKVCGCRRKMALEWPLGNGKLKGGGVDLGRRCREGGDRDWIKMLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLGCLAFGSYKKYEVSFTSDFNKYLFVYLNLHAIIPFE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo10820.1	Spo10820.1	mRNA

Homology

[Close]

BLAST of Spo10820.1 vs. NCBI nr
Match: gi|902234865|gb|KNA23619.1| (hypothetical protein SOVF_023350 [Spinacia oleracea])

HSP 1 Score: 231.5 bits (589), Expect = 1.300e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1

		  
Query: 50  MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS 109
           MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS
Sbjct: 1   MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS 60

Query: 110 LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG
Sbjct: 61  LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 115

[Close]

BLAST of Spo10820.1 vs. NCBI nr
Match: gi|731346087|ref|XP_010684269.1| (PREDICTED: uncharacterized protein LOC104898854 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 157.5 bits (397), Expect = 2.400e-35
Identity = 82/119 (68.91%), Postives = 95/119 (79.83%), Query Frame = 1

		  
Query: 51  LVTTRTIGGMQWSVSSLSKRRL------LSCSSSAAVKSRKLILYSKPGCCLCDGLKEKL 110
           ++TTRTI GM WSV SLS RR+      +  SSS+AV ++ LILYSKPGCCLCDGLKEKL
Sbjct: 3   IMTTRTIVGMPWSVLSLSNRRISTPPKFIRASSSSAVPNKNLILYSKPGCCLCDGLKEKL 62

Query: 111 SAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRL 164
            AAFS+S       +++LQIRDITTNP+WE+AYQYEIPVLAKL  DGTEETLPRLSPRL
Sbjct: 63  LAAFSIS-------DLNLQIRDITTNPEWEKAYQYEIPVLAKLCADGTEETLPRLSPRL 114

[Close]

BLAST of Spo10820.1 vs. NCBI nr
Match: gi|1009172094|ref|XP_015867085.1| (PREDICTED: uncharacterized protein LOC107404627 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 155.2 bits (391), Expect = 1.200e-34
Identity = 75/89 (84.27%), Postives = 83/89 (93.26%), Query Frame = 1

		  
Query: 76  SSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWER 135
           SSS+A+ SRKL+LYSKPGCCLCDGLKEKL AAF LS P D LH+VDLQIRDIT+NP+WER
Sbjct: 36  SSSSALPSRKLVLYSKPGCCLCDGLKEKLQAAFLLSGP-DSLHDVDLQIRDITSNPEWER 95

Query: 136 AYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           AYQYEIPVLAK+L+DGTEETLPRLSPRLG
Sbjct: 96  AYQYEIPVLAKVLSDGTEETLPRLSPRLG 123

[Close]

BLAST of Spo10820.1 vs. NCBI nr
Match: gi|224066847|ref|XP_002302244.1| (hypothetical protein POPTR_0002s08570g [Populus trichocarpa])

HSP 1 Score: 152.5 bits (384), Expect = 7.600e-34
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 1

		  
Query: 72  LLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNP 131
           L  CSSS++   RKLILYSKPGCCLCDGLKEKL AAF LS P   LH+VDLQ+RDIT+NP
Sbjct: 31  LAFCSSSSSASRRKLILYSKPGCCLCDGLKEKLQAAFLLSGPHS-LHDVDLQVRDITSNP 90

Query: 132 DWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           +WERAYQYEIPVLAK+L+DGTEETLPR+SPRLG
Sbjct: 91  EWERAYQYEIPVLAKVLSDGTEETLPRISPRLG 122

[Close]

BLAST of Spo10820.1 vs. NCBI nr
Match: gi|567883207|ref|XP_006434162.1| (hypothetical protein CICLE_v10002717mg [Citrus clementina])

HSP 1 Score: 149.4 bits (376), Expect = 6.500e-33
Identity = 76/126 (60.32%), Postives = 94/126 (74.60%), Query Frame = 1

		  
Query: 48  IKMLVTTRTIGGMQWSVSSLSKRR---------LLSCSSSAAVKSRKLILYSKPGCCLCD 107
           I    T  T+     S++ +S+RR           S SSS++  +RKL+LYSKPGCCLCD
Sbjct: 27  IMAAATVATVVARPLSLTLVSRRRSRWGFSPLAYSSSSSSSSSSTRKLVLYSKPGCCLCD 86

Query: 108 GLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPR 165
           GLKEKL AAF LS P D LH+VDLQ+RDITTNP+WE++YQYEIPVLA++L+DGTEE LPR
Sbjct: 87  GLKEKLQAAFLLSGP-DSLHDVDLQVRDITTNPEWEKSYQYEIPVLARVLSDGTEEALPR 146

[Close]

BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXI3_SPIOL (Glutaredoxin-like protein OS=Spinacia oleracea GN=SOVF_023350 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.000e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1

		  
Query: 50  MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS 109
           MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS
Sbjct: 1   MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS 60

Query: 110 LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG
Sbjct: 61  LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 115

[Close]

BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ESK5_BETVU (Glutaredoxin-like protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163160 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.700e-35
Identity = 82/119 (68.91%), Postives = 95/119 (79.83%), Query Frame = 1

		  
Query: 51  LVTTRTIGGMQWSVSSLSKRRL------LSCSSSAAVKSRKLILYSKPGCCLCDGLKEKL 110
           ++TTRTI GM WSV SLS RR+      +  SSS+AV ++ LILYSKPGCCLCDGLKEKL
Sbjct: 3   IMTTRTIVGMPWSVLSLSNRRISTPPKFIRASSSSAVPNKNLILYSKPGCCLCDGLKEKL 62

Query: 111 SAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRL 164
            AAFS+S       +++LQIRDITTNP+WE+AYQYEIPVLAKL  DGTEETLPRLSPRL
Sbjct: 63  LAAFSIS-------DLNLQIRDITTNPEWEKAYQYEIPVLAKLCADGTEETLPRLSPRL 114

[Close]

BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: B9GU56_POPTR (Glutaredoxin-like protein OS=Populus trichocarpa GN=POPTR_0002s08570g PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.300e-34
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 1

		  
Query: 72  LLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNP 131
           L  CSSS++   RKLILYSKPGCCLCDGLKEKL AAF LS P   LH+VDLQ+RDIT+NP
Sbjct: 31  LAFCSSSSSASRRKLILYSKPGCCLCDGLKEKLQAAFLLSGPHS-LHDVDLQVRDITSNP 90

Query: 132 DWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           +WERAYQYEIPVLAK+L+DGTEETLPR+SPRLG
Sbjct: 91  EWERAYQYEIPVLAKVLSDGTEETLPRISPRLG 122

[Close]

BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: A0A067GZI3_CITSI (Glutaredoxin-like protein OS=Citrus sinensis GN=CISIN_1g030511mg PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.500e-33
Identity = 76/126 (60.32%), Postives = 94/126 (74.60%), Query Frame = 1

		  
Query: 48  IKMLVTTRTIGGMQWSVSSLSKRR---------LLSCSSSAAVKSRKLILYSKPGCCLCD 107
           I    T  T+     S++ +S+RR           S SSS++  +RKL+LYSKPGCCLCD
Sbjct: 3   IMAAATVATVVARPLSLTLVSRRRSRWGFSPLAYSSSSSSSSSSTRKLVLYSKPGCCLCD 62

Query: 108 GLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPR 165
           GLKEKL AAF LS P D LH+VDLQ+RDITTNP+WE++YQYEIPVLA++L+DGTEE LPR
Sbjct: 63  GLKEKLQAAFLLSGP-DSLHDVDLQVRDITTNPEWEKSYQYEIPVLARVLSDGTEEALPR 122

[Close]

BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: V4V5W6_9ROSI (Glutaredoxin-like protein OS=Citrus clementina GN=CICLE_v10002717mg PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.500e-33
Identity = 76/126 (60.32%), Postives = 94/126 (74.60%), Query Frame = 1

		  
Query: 48  IKMLVTTRTIGGMQWSVSSLSKRR---------LLSCSSSAAVKSRKLILYSKPGCCLCD 107
           I    T  T+     S++ +S+RR           S SSS++  +RKL+LYSKPGCCLCD
Sbjct: 27  IMAAATVATVVARPLSLTLVSRRRSRWGFSPLAYSSSSSSSSSSTRKLVLYSKPGCCLCD 86

Query: 108 GLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPR 165
           GLKEKL AAF LS P D LH+VDLQ+RDITTNP+WE++YQYEIPVLA++L+DGTEE LPR
Sbjct: 87  GLKEKLQAAFLLSGP-DSLHDVDLQVRDITTNPEWEKSYQYEIPVLARVLSDGTEEALPR 146

[Close]

BLAST of Spo10820.1 vs. TAIR (Arabidopsis)
Match: AT4G08280.1 (Thioredoxin superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.100e-33
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 1

		  
Query: 73  LSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPD 132
           LS SSS+   +RKL+LYSKPGCCLCDGLKEKL AAF+LS+  D L++V LQ+RDITTNP+
Sbjct: 22  LSSSSSSKPNTRKLVLYSKPGCCLCDGLKEKLHAAFTLSTGPDSLNDVTLQVRDITTNPE 81

Query: 133 WERAYQYEIPVLAKLLTDGTEETLPRLSPRL 164
           WERAYQYEIPVLAK  +DG EE LPRLSPRL
Sbjct: 82  WERAYQYEIPVLAKENSDGKEEVLPRLSPRL 112

The following BLAST results are available for this feature:

BLAST of Spo10820.1 vs. NCBI nr
BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
BLAST of Spo10820.1 vs. ExPASy Swiss-Prot
BLAST of Spo10820.1 vs. TAIR (Arabidopsis)

BLAST of Spo10820.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902234865\|gb\|KNA23619.1\|	1.3e-57	100.	hypothetical protein SOVF_0233...	[more]
gi\|731346087\|ref\|XP_010684269.1\|	2.4e-35	68.9	PREDICTED: uncharacterized pro...	[more]
gi\|1009172094\|ref\|XP_015867085.1\|	1.2e-34	84.2	PREDICTED: uncharacterized pro...	[more]
gi\|224066847\|ref\|XP_002302244.1\|	7.6e-34	78.4	hypothetical protein POPTR_000...	[more]
gi\|567883207\|ref\|XP_006434162.1\|	6.5e-33	60.3	hypothetical protein CICLE_v10...	[more]

BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RXI3_SPIOL	9.0e-58	100.	Glutaredoxin-like protein OS=S...	[more]
A0A0J8ESK5_BETVU	1.7e-35	68.9	Glutaredoxin-like protein OS=B...	[more]
B9GU56_POPTR	5.3e-34	78.4	Glutaredoxin-like protein OS=P...	[more]
A0A067GZI3_CITSI	4.5e-33	60.3	Glutaredoxin-like protein OS=C...	[more]
V4V5W6_9ROSI	4.5e-33	60.3	Glutaredoxin-like protein OS=C...	[more]

BLAST of Spo10820.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo10820.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT4G08280.1	1.1e-33	74.7	Thioredoxin superfamily protei...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008554	Glutaredoxin-like	PFAM	PF05768	DUF836	coord: 85..163 score: 4.7
IPR012336	Thioredoxin-like fold	GENE3D	3.40.30.10		coord: 85..159 score: 1.5
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 80..155 score: 1.6
None	No IPR available	PANTHER	PTHR33558	FAMILY NOT NAMED	coord: 70..164 score: 3.0
None	No IPR available	PANTHER	PTHR33558:SF1	GLUTAREDOXIN-LIKE PROTEIN C5ORF63	coord: 70..164 score: 3.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0000737	DNA catabolic process, endonucleolytic
biological_process	GO:0016578	histone deubiquitination
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0015031	protein transport
biological_process	GO:0001510	RNA methylation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0007034	vacuolar transport
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006285	base-excision repair, AP site formation
biological_process	GO:0006306	DNA methylation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0019852	L-ascorbic acid metabolic process
biological_process	GO:0010731	protein glutathionylation
biological_process	GO:0010583	response to cyclopentenone
biological_process	GO:0009636	response to toxic substance
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0009733	response to auxin
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006412	translation
biological_process	GO:0006368	transcription elongation from RNA polymerase II promoter
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0010817	regulation of hormone levels
biological_process	GO:0010015	root morphogenesis
biological_process	GO:0008152	metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0060560	developmental growth involved in morphogenesis
biological_process	GO:0048869	cellular developmental process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0016049	cell growth
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0048653	anther development
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0007389	pattern specification process
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0006508	proteolysis
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0030904	retromer complex
cellular_component	GO:0070390	transcription export complex 2
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005840	ribosome
cellular_component	GO:0071819	DUBm complex
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0045174	glutathione dehydrogenase (ascorbate) activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046914	transition metal ion binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004364	glutathione transferase activity
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0003713	transcription coactivator activity
molecular_function	GO:0008534	oxidized purine nucleobase lesion DNA N-glycosylase activity
molecular_function	GO:0046983	protein dimerization activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25503	0.86	Barchart \| Table
Spo27236	0.83	Barchart \| Table
Spo00538	0.82	Barchart \| Table
Spo15608	0.80	Barchart \| Table
Spo10817	0.79	Barchart \| Table
Spo15244	0.78	Barchart \| Table
Spo01967	0.78	Barchart \| Table
Spo04037	0.78	Barchart \| Table
Spo04387	0.78	Barchart \| Table
Spo24307	0.76	Barchart \| Table
Spo11629	0.76	Barchart \| Table
Spo08497	0.76	Barchart \| Table
Spo12379	0.74	Barchart \| Table
Spo09469	0.73	Barchart \| Table
Spo19305	0.73	Barchart \| Table
Spo00754	0.72	Barchart \| Table
Spo09460	0.72	Barchart \| Table
Spo10300	0.72	Barchart \| Table
Spo05708	0.72	Barchart \| Table
Spo13121	0.71	Barchart \| Table
Spo26907	0.71	Barchart \| Table
Spo04959	0.71	Barchart \| Table
Spo09321	0.71	Barchart \| Table
Spo23874	0.71	Barchart \| Table
Spo15882	0.71	Barchart \| Table
Spo17884	0.70	Barchart \| Table
Spo15984	0.70	Barchart \| Table
Spo21716	0.70	Barchart \| Table
Spo23709	0.69	Barchart \| Table
Spo26313	0.69	Barchart \| Table
Spo07549	0.69	Barchart \| Table
Spo03006	0.69	Barchart \| Table
Spo06936	0.69	Barchart \| Table
Spo23067	0.69	Barchart \| Table
Spo06045	0.69	Barchart \| Table
Spo25111	0.68	Barchart \| Table
Spo25995	0.68	Barchart \| Table
Spo25075	0.67	Barchart \| Table
Spo03213	0.67	Barchart \| Table
Spo08712	0.66	Barchart \| Table
Spo17047	0.66	Barchart \| Table
Spo18617	0.66	Barchart \| Table
Spo19407	0.66	Barchart \| Table
Spo21300	0.66	Barchart \| Table
Spo00851	0.66	Barchart \| Table
Spo24610	0.66	Barchart \| Table
Spo25175	0.66	Barchart \| Table
Spo05810	0.65	Barchart \| Table
Spo14051	0.65	Barchart \| Table
Spo13428	0.65	Barchart \| Table