Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAGCTTAAGGCAGAGTTTGGGGATTGATATATACAGAGCTGTATCCTTGTCATAATGTTTTGAAAGTAGCATGTAAATGATCGTTTCTTTATAAGACATTGTTGCATACATGATACATGAATGATACAGCTAATCCCCATGTTTTAAGACTAATTGTGATTGTGAATGGAAACTAAAAGTTGGTATACACGAGCTCAAGATCCATTATAACTGTCATGAGTTGATCAGTGAGAACTGAGAAGTGAGAAGTGAGAAGTGTAAGCATGTTCCACTTCCACAAACGAGAAATTATGTAATCCACATAAACTGTTTCTGGATATAACCAGTTTCAGTATCCTTTCAATTTGGTGTAACATTATACTCAAATTAATTTCACGAAAATCTATAGTATTTTCTGAAACCCAATATGTTCTGGGAGTTGGATTGTAAATAAAAAAAAGAAAAGAAAAATAGTGATGCGCAATGATACGTGGCATTAGCCTATAGGTAGTGACACATAGAAATAATGACGTGGCAGTGGCTGTGGCTGTGGCTGTGGCTGTGGCTGTGGCAGGCATATAAAGCAACTAGGATGACATAACGAAGCGTTAAGGATAAAATTAACATCAGAAATCCGTAATATCAACTGCTCGTAGAAGGAGAAGAGAGAGTCTTGTCTGCAACTCTGCAAGGGAAGGTGATCCGTCTCCCATGGCTTACGTCGAGAAGGGTACGTCTCCTTCTCAATTTTATTTTATTTTTTTATTTTGGTGTCATGGTTTGTTTTTATCTCCTTGTTTTGGATTAAATTGCGATCTACACATTTATGAATTGACTGTCGATTTTTTGTGTTTCCCGTTCTATTCTATATTCTCTGCATAATCCATGTTTGATTGTCTTCTTTAATTTTCGATTTCATTTATTGCGCGATTTAATTAAAGCTTTTCAAACACCCTGGTTTTTTTTTTTTTTTAGGTTTTTAGTAAATCAATTTTGAGTATTAGGGTTTGTATGTCAATGTTTGATATGCACCGAGATCTGTTTGCACTCTCCCTTGCTTAGGAGCAACCTAAGGGCACAAATTTTAGGGATTTAATCTTCAAACTTGATTTTGACGAAGCGATTCTTTGTAGACCGGCCCAATTTTAGGGATTTGTGAGGCAAATCATATGTACCAGATTCAGCATCCTATGATCATACACAATTTCAGAACCTTCTTTGCTATAGATGTCGGAACTTCCACTAACTGAGCTTAGAAATGCCTCCGGAGTGTAACCTGGTGAATCATGTTTATGTGAACCTAATTTTTGTTCTGGAGTTCGCAAACCAAACTCTTCATTGATACCAGCTCTGAGCATGCCAAAAGTCGATTTTTCTGGTTTTCCTGTGAGTATAGGATGTAATCAATGAATAGGATAGCATATAAAATAGCTAACTCATTAGGAGGCAGGAGGTACTCACAAACTAAAGCCAGCACGAAGGGAACTATATAAGCATGATAGGAAAAAATACAAGGATGGTAAGAAGCTCAAAGTCAACTTTAGAAAGAATGTTGTCTTCTGGTGAAAGGTGATCCAGTTGCAAGTTTGGGAGACTGATTTTCTGCCATCACAATCAATTACGTGGTTTGATCCCCTTGTACAAAACAACTTCGGGAAAAAAATCTGTAGAGCTTCAAAGTTCAGATCACTTATAGTTTCAATTGCAAATGAAACATTAAAACATCATCTAATAACATCGATCAGTATACCTCTTGCAGTCTTGCCTTAGCATCATCTAAAACATCATTCATAAAGCAAAAGGTTTTTAGATAAGTTTTAGAAAACAAGGGATCATTCTTTAAGTACTAGATTATATTTAAGTATTTAACTGGATAGGGGATTTAAGTCATGGGGATCCAGAAGTTTGACAGACCTCTTCTTGGTGATTCAATTGAAGTGACCCTTTCATCCTGTGATATGCCCTGTGTGGAGGATGTGTTATATCAGACGTCAGGCCTTTATGTTTGGATACTACTTCCGGTTGCACCTTTAGCTCATTGGGTATCTGCAAGATTACATGTTATGCTAGTAGCAGATTCTAATGTTAATCCATCCCACTTTTCATAGATCTTAATTACACGTTTGGCTGTGATCAAAGTTCAGACTGATAATGGAATCAAAACAGGGATTCTATTTATGCTAGTTTCGTAATTGTACAGGCAGAATCAAGCCTTTTCTTCCGTAACAGTTATACCCAATTTGAATCACTCCACCCTGCGGTATCAGTGACACTATTTACTGGAAATACTAAAAAAACTCATTTATATCCCCTCCTCTCTCCTATAAAAACGTCACAACTGTAGAAACAAAGAAAGAGAGATGCTAAATAGAACACATAAGAGAGAGAAAGAGTAAGGACAACCTAGGAGGACCCTGATTCAACACCACCCTAGCTATCACAGTACAAAATACTTGATAATTGGTAGAATAGACAATATTGTAGTAAATCAGCCATGAAAGGACGTTATGCCCAAATCTAGGCTTGGAGCCAAAATTGGTTCTTCCATAGCTGAAAGCACATTATACATATCAACTTGAAAGAAGAAATGACTCCATTTATGGCAAGCAGCATGGTCTTGTTGCAAATAATGGGCAAGAGAAAGTGACTAAGACTATGGAGAAAGAAAGGATAGAGAGAGGGTATTAAATGAGTTCCATGCTGGTATTAATATTTGGTAATATAAATTTTTGATTGCAGCTACTTACCAAAGCTTTATTTTACACCAGGTGTTGTCAAAACAAAGCGGTCACTATGGCGTTTGAAGACGTTCACTGATTCCTTCTGGTCTATTATCAACTTCGTTGTATTTTTCGTTACAACAATGTTTTCGGTGAGTTATCATATGAGGATGCCATAAGTTAATTTGTAACAGTTACAAAAAAATAACTGTGGTGCAGTTATCTTGATACATAATGCATGTACTCTGACTTCTGAGTTGCAGATGGAGAAGTCAGATGCTTATAAGAAAACATCTGGTTCCGGCAAGAAATGGGACGGTGGTGGCCCTGGTGGTGGAAGAGGCCCATATGGTGGTGGTCCTCCTGGACCTCCACGTGGGTTAGACAATGTTCGTGGATTGAGGGATGTTCGTGGTGCAGATCACAGTAAGCTCCGTTTCCTTGTTTCTTAACTCCACTTTGAACTTTGGGTTCTTGTGTTAACATTTATTTTTCATGGTTCAGGCTCACTTCCTGCCTGTGGTTCTTGCTGCGGCTGA ATGAGCAGCTTAAGGCAGAGTTTGGGGATTGATATATACAGAGCTAAATCCGTAATATCAACTGCTCGTAGAAGGAGAAGAGAGAGTCTTGTCTGCAACTCTGCAAGGGAAGGTGATCCGTCTCCCATGGCTTACGTCGAGAAGGGTGTTGTCAAAACAAAGCGGTCACTATGGCGTTTGAAGACGTTCACTGATTCCTTCTGGTCTATTATCAACTTCGTTGTATTTTTCGTTACAACAATGTTTTCGATGGAGAAGTCAGATGCTTATAAGAAAACATCTGGTTCCGGCAAGAAATGGGACGGTGGTGGCCCTGGTGGTGGAAGAGGCCCATATGGTGGTGGTCCTCCTGGACCTCCACGTGGGTTAGACAATGTTCGTGGATTGAGGGATGTTCGTGGTGCAGATCACAGCTCACTTCCTGCCTGTGGTTCTTGCTGCGGCTGA ATGAGCAGCTTAAGGCAGAGTTTGGGGATTGATATATACAGAGCTAAATCCGTAATATCAACTGCTCGTAGAAGGAGAAGAGAGAGTCTTGTCTGCAACTCTGCAAGGGAAGGTGATCCGTCTCCCATGGCTTACGTCGAGAAGGGTGTTGTCAAAACAAAGCGGTCACTATGGCGTTTGAAGACGTTCACTGATTCCTTCTGGTCTATTATCAACTTCGTTGTATTTTTCGTTACAACAATGTTTTCGATGGAGAAGTCAGATGCTTATAAGAAAACATCTGGTTCCGGCAAGAAATGGGACGGTGGTGGCCCTGGTGGTGGAAGAGGCCCATATGGTGGTGGTCCTCCTGGACCTCCACGTGGGTTAGACAATGTTCGTGGATTGAGGGATGTTCGTGGTGCAGATCACAGCTCACTTCCTGCCTGTGGTTCTTGCTGCGGCTGA MSSLRQSLGIDIYRAKSVISTARRRRRESLVCNSAREGDPSPMAYVEKGVVKTKRSLWRLKTFTDSFWSIINFVVFFVTTMFSMEKSDAYKKTSGSGKKWDGGGPGGGRGPYGGGPPGPPRGLDNVRGLRDVRGADHSSLPACGSCCG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10829.1 vs. NCBI nr
Match: gi|902162175|gb|KNA06650.1| (hypothetical protein SOVF_179130 [Spinacia oleracea]) HSP 1 Score: 268.1 bits (684), Expect = 9.300e-69 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of Spo10829.1 vs. NCBI nr
Match: gi|731310585|ref|XP_010686261.1| (PREDICTED: selenoprotein K [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 199.1 bits (505), Expect = 5.300e-48 Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1
BLAST of Spo10829.1 vs. NCBI nr
Match: gi|1009136598|ref|XP_015885609.1| (PREDICTED: selenoprotein K isoform X1 [Ziziphus jujuba]) HSP 1 Score: 169.5 bits (428), Expect = 4.500e-39 Identity = 84/107 (78.50%), Postives = 91/107 (85.05%), Query Frame = 1
BLAST of Spo10829.1 vs. NCBI nr
Match: gi|225459495|ref|XP_002285840.1| (PREDICTED: selenoprotein K [Vitis vinifera]) HSP 1 Score: 164.1 bits (414), Expect = 1.900e-37 Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = 1
BLAST of Spo10829.1 vs. NCBI nr
Match: gi|697106574|ref|XP_009607117.1| (PREDICTED: selenoprotein K [Nicotiana tomentosiformis]) HSP 1 Score: 163.3 bits (412), Expect = 3.200e-37 Identity = 83/107 (77.57%), Postives = 90/107 (84.11%), Query Frame = 1
BLAST of Spo10829.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHD2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_179130 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 6.500e-69 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of Spo10829.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1H4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g000180 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 3.700e-48 Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1
BLAST of Spo10829.1 vs. UniProtKB/TrEMBL
Match: A5CA43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015657 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.300e-37 Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = 1
BLAST of Spo10829.1 vs. UniProtKB/TrEMBL
Match: A0A067GZK2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033941mg PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 9.400e-36 Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 1
BLAST of Spo10829.1 vs. UniProtKB/TrEMBL
Match: V4T2M0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002911mg PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 9.400e-36 Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 1
BLAST of Spo10829.1 vs. TAIR (Arabidopsis)
Match: AT4G08230.1 (glycine-rich protein) HSP 1 Score: 132.5 bits (332), Expect = 2.100e-31 Identity = 76/113 (67.26%), Postives = 82/113 (72.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10829.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10829.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10829.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo10829.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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