Spo10832 (gene)

Overview
NameSpo10832
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUbiquitin-fold modifier 1
LocationSpoScf_00206 : 257608 .. 261568 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCATTTGATCGGGTAAGAATTGTGAATTTGTGAACCCGCTTCACAACCCAGAAACCAAATAGAAAGGTAGAAAGGGAAGAAGCAAATAGAAAGAGGAAAAATCAAATCGGAGTGAAAACTATGGCGAGTGGAGCAGCAGCACCAGCAGGAGGAGGAGGGAAGGTATCGTTTAAGATCACATTGACTTCTGATCCAAAGCTTCCTTTCAAAGTGTAAGTTTATCTGATTTCTCATATCTGATTTCGGGAGATTCGACATACAATTCGATTGAAATTGTAATTTCAATGTAAACAGGTTTAGCGTGCCGGAAGCTGCGCCTTTCACCGCCGTCCTCAAATTTGCCGCCGAGGAATTCAAAGTCCCTCCCCAGACAAGCGCTATCATCACAAATGGTATTTTCTTTTTATTTATTTCATAAAATGTGTAAATTCAATCAAAAGTGGCATCCGTTTATTGTACATACTTCAATTATGATGAAAGATTTTTGATTTTCAGTTTTAGTTTTAGTTTTAGTTTTAGGTTTCTTTCGGAGCTGAATTACATGATTTCGGTGCTTAATTTCAAAACCCTACTGATTCAATATCAAATCATCTGGAGTTTAGGGTATGCTGTGATCCAATTAGAATTCAAACCACTGCCTTTTTAACTCAACAATTCAATTCCACCTGATTGTGGAAATTCAGTTGAAATTTAAGCATAATAAGTTGTATAGACATGCTGCAAGGAAGCAACGGAACTTGTAAATTTAGTATTCAATGTGTTGAGGGACGTACATGAATTAAGTTCTGCGCCAAAAATTACCTCATTTCATTGCATAAGAATTATGTAGTGCTGTTTCCTACAACTAAACAGGCAAACAGCCTTGCAACGAGAGAGTTGTGTATCCAATTACTCCAGGCTATTCAATTCTGTACCCGTTATGTGACATGTTCTCTCTTACACAAGCTCCTAGTGGCTTCGGAATATTCTTCTTTGCATTATCAATCAAACGAGAGAATATTAGGTGATAAGGGCCCTAAATTGTAAATACAAACGGTATTAGACTATGAATATCCTACAGTTCCCTTTTACTTAGCTGAGAAATCTGGGATAATGGATTACATAGCGTTGCCAAAACATCTAAAACCTTTCCTGTTGATCATTCGTCTCAAATTCAGTTCCCAAGGATGGAACTTTCAATGTCCTTTGTACCTATCCAATGAGAACATAGCTCTCCTTCAGCAAATGTGGTGTACTTCAAGAGTTCAAGTTTAAAAATATCTAAACAAGCGCTTCTAAGGGATTCAAAATTAAAAGGTCAACGCAAAATGAAAGTTGCTCTGATACTTTCCTTAGTAGAAAAGAGTGATAGTTGGTGCACGAAGTTGTATTTTATCTGATGCTTGGTACAATTACTTGAGTTAGTTGGACAGACAACGTCTCTCCTTCGTTGTTTCATCTCTGTTTTTCTCACCGCATATCAATATTTATTTTCTATAGTCTGAACTTGTGGAGCTTCATGGTTTGTGCATTCAGAACTTGCAGTCCTTACTGAGTATGTGAGTATATTGAAACCTAGGGTAATAATGGTGCAATCATTTTCTTTTTGGTAATTAAGTAATATTATTGCCAAGATCAATCATCCACTCTCAAGGATCTCCCAACAGGCCAACAGCAACCGTAGGCTCTGTAGGCCTAAGCCTTACAACTACCAAGCGAACATTTTAACGGTTTATCCCAAGGATACAAACCAAGCTCTATCAACTCGGAACACCTTTTTACCTAAGAATCTAAGATACAATAGATTCTACGCTTCACTATGCTCTGTATCTGCTTAACTACTGCATTAACAGTAGGGATTTAACGATTCCATATAGCTTCTTTTGAAACATTCCAGATTGTGTACGAAGTTGCAGCCAAAAATGCTATTGCAACTTTTCTCCAGAATTGAGATTTCCTTGCTCGTCTACTAATCCATCTCAAAATGTAATAGATATCATTAGTCACTCATAGCCCTGATTCCAAGTCATTGTTTGATCCTCTTAATGCACCAATTGCTGTATGGACATTCAAAGAACAGATGTTTGTGAGATTCACGATCCTGCCCACAAATGCAACAACTATCAGTTTCACTAATGTGCAATTTTAATAATCGTTGCCTAGTCTGCAGCCTCCCAAGCATATGCAAGCCAAACTATGAATCTGCTTGCACATAGTAAACCAATTACAGACCAACTTGTTCCAATGCATTTTTTAATATTTGTCTAAACAACGTTGTTAGTGGCATATACATTGATACATATAGCTTGCTTTATGCTACTTAGGTGGGCAGTAACTAGTAAGGTTCTCAGCTTACTATGAAAGTTCAATTGCTGACATATATCTGTATGAATAAGGGAACATATCTTCTTGATTTTTGTTCAATCAGGCTCCAAGATAGCAGTTTTCTTTATTAAGTTACAAACTTATTACAGCCTTGAAATATTATGCATCACACTGCTCTTTGGTTTGAAATTTTACATTCCACTAATTAAGTTTCATTCTTTTTTTCCTTTTTAAAAACAGATGGTGTTGGTATTAATCCTCAGCAAAGTGCAGGTAAGCAAAATTTGTATATTGGTTAGCAGTTGTTTTTCCTTCAGAAATCCTCTATGACAATTTTTTAAGGCTTCTTCTTTTGCTTGGCTGTTGAAATATTTAATGTATGAGGCATTATATCCACTCCACTTGCTGTGTAGCTCAGTAGCTTATACGGAATTACGGAGTATGAATTTCAATATCAGAATTACATAAGTAATGTTTAGTCATATCCCATATTTCGCATGTGAGTAAGTTGTGTGGATGTTTTTTTGATATCTCCTCAATTGTCATTGATGCACTAATTTGTTTCCTTGTCCTTCCATCCATCCTTTCCTGTGCAATAGCGTAGCCTTATATTCTTATCAGTTTTCAATTTATAATTTCTTTCAAAAGTTGGCTGTAAGGGAAATACACAATTGCTTTAGTCAAAATTTCCTTTGTTTTCATCATGGAGCATGGACTACTGTTAAATTTGAAATGTTAGGACATAAGCACTCTGGTTAATGTTGATTCAATTATGAACCTGGCATTCATTTGGATCATAAATATGTTAAGCTATCAATTGAGAAATTGTAGTGGTTGTGTGGCTAACTGGCTAAACTGGGGAGAGAAATGTCTTCATGGTTGTGCTGGAGCCATTAATTTCACAGCTTTTGAATTCTGTATAGCTTCTAGTATTTCTACTGCTACTTTCTCATATCTACTTCTCATTTTGTTTGAGTGCATGTGCAAATTTGTTTTAATGCTCCGTAGTTATTAGTCTGTTTTTGGCTTCGTGCTTTTAACTCATTCGGCATTATTGGTGGATCCTTATTATTGGTGGATCCTTAGAATACTGCTAAGAAGAATGTATTAAGCACTACTAATAGTGTTTCTGATGATTAACTCAATTAATTGTATAGGTAATGTCTTCCTCAAGCATGGTTCTGAATTGCGGCTGATTCCCCGTGATAGAGTTGGGACTCTGCGGACCTCCTTTTAGATGATCTTGTCATAAGAATTACTACAACTCAGTTATGCTGTCAATGAATTTCGTCTTGGATGTAAGAATTCGAGGCTTTATATACTACTCATCGAAATATGTTCACCTCTTGTCTCGAAATTAATAATGTACAAGTTACAAAATGGAAAGGTTTTGGAGTTTGGATAAAGTTTACTTGGTATTTGTAGCTATTATTTTACCAACCCATCCAGAAATAACCAGACAGTAATTTAGGCAATGAACAATTTCGATCAACAGGCAGAGTTGGTGCATCATTCTTTAAAACTGACTGTGGATAGACCCCTGCAGTCTTGCAGGTTCTGCTCAAAAATTAATGCATAGTTTACCCAACAAAAACTATAAATAAGTAAATAGTGTGGCCCCTTTCCCCAGTTATATGAACCCTTTTCTTTTATAT

mRNA sequence

AATCATTTGATCGGGTAAGAATTGTGAATTTGTGAACCCGCTTCACAACCCAGAAACCAAATAGAAAGGTAGAAAGGGAAGAAGCAAATAGAAAGAGGAAAAATCAAATCGGAGTGAAAACTATGGCGAGTGGAGCAGCAGCACCAGCAGGAGGAGGAGGGAAGGTATCGTTTAAGATCACATTGACTTCTGATCCAAAGCTTCCTTTCAAAGTGTTTAGCGTGCCGGAAGCTGCGCCTTTCACCGCCGTCCTCAAATTTGCCGCCGAGGAATTCAAAGTCCCTCCCCAGACAAGCGCTATCATCACAAATGATGGTGTTGGTATTAATCCTCAGCAAAGTGCAGGTAATGTCTTCCTCAAGCATGGTTCTGAATTGCGGCTGATTCCCCGTGATAGAGTTGGGACTCTGCGGACCTCCTTTTAGATGATCTTGTCATAAGAATTACTACAACTCAGTTATGCTGTCAATGAATTTCGTCTTGGATGTAAGAATTCGAGGCTTTATATACTACTCATCGAAATATGTTCACCTCTTGTCTCGAAATTAATAATGTACAAGTTACAAAATGGAAAGGTTTTGGAGTTTGGATAAAGTTTACTTGGTATTTGTAGCTATTATTTTACCAACCCATCCAGAAATAACCAGACAGTAATTTAGGCAATGAACAATTTCGATCAACAGGCAGAGTTGGTGCATCATTCTTTAAAACTGACTGTGGATAGACCCCTGCAGTCTTGCAGGTTCTGCTCAAAAATTAATGCATAGTTTACCCAACAAAAACTATAAATAAGTAAATAGTGTGGCCCCTTTCCCCAGTTATATGAACCCTTTTCTTTTATAT

Coding sequence (CDS)

ATGGCGAGTGGAGCAGCAGCACCAGCAGGAGGAGGAGGGAAGGTATCGTTTAAGATCACATTGACTTCTGATCCAAAGCTTCCTTTCAAAGTGTTTAGCGTGCCGGAAGCTGCGCCTTTCACCGCCGTCCTCAAATTTGCCGCCGAGGAATTCAAAGTCCCTCCCCAGACAAGCGCTATCATCACAAATGATGGTGTTGGTATTAATCCTCAGCAAAGTGCAGGTAATGTCTTCCTCAAGCATGGTTCTGAATTGCGGCTGATTCCCCGTGATAGAGTTGGGACTCTGCGGACCTCCTTTTAG

Protein sequence

MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10832.1Spo10832.1mRNA


Homology
[Close]
BLAST of Spo10832.1 vs. NCBI nr
Match: gi|902180310|gb|KNA09531.1| (hypothetical protein SOVF_152800 [Spinacia oleracea])

HSP 1 Score: 196.4 bits (498), Expect = 2.300e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60
           MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI
Sbjct: 1   MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60

Query: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF
Sbjct: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 100
[Close]
BLAST of Spo10832.1 vs. NCBI nr
Match: gi|573915401|ref|XP_006645355.1| (PREDICTED: ubiquitin-fold modifier 1 [Oryza brachyantha])

HSP 1 Score: 177.6 bits (449), Expect = 1.100e-41
Identity = 91/99 (91.92%), Postives = 91/99 (91.92%), Query Frame = 1 

		  

Query: 2   ASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII 61
           A   A  AGGGGKVSFKI LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII
Sbjct: 4   AGSGAGAAGGGGKVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII 63

Query: 62  TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG L TSF
Sbjct: 64  TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALGTSF 102
[Close]
BLAST of Spo10832.1 vs. NCBI nr
Match: gi|565397777|ref|XP_006364461.1| (PREDICTED: ubiquitin-fold modifier 1 [Solanum tuberosum])

HSP 1 Score: 176.8 bits (447), Expect = 1.900e-41
Identity = 92/100 (92.00%), Postives = 93/100 (93.00%), Query Frame = 1 

		  

Query: 1   MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60
           MASG  A  GGGGKVSFK+TLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI
Sbjct: 1   MASGGGA--GGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60

Query: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG L  SF
Sbjct: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALWISF 98
[Close]
BLAST of Spo10832.1 vs. NCBI nr
Match: gi|747046120|ref|XP_011097797.1| (PREDICTED: ubiquitin-fold modifier 1 [Sesamum indicum])

HSP 1 Score: 176.4 bits (446), Expect = 2.500e-41
Identity = 89/94 (94.68%), Postives = 90/94 (95.74%), Query Frame = 1 

		  

Query: 1  MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60
          MASG A   GGGGKVSFK+TLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI
Sbjct: 1  MASGGAGGGGGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60

Query: 61 ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 95
          ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG
Sbjct: 61 ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 94
[Close]
BLAST of Spo10832.1 vs. NCBI nr
Match: gi|118484173|gb|ABK93968.1| (unknown [Populus trichocarpa])

HSP 1 Score: 176.0 bits (445), Expect = 3.200e-41
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 1 

		  

Query: 1  MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60
          MASG AA AGGGGKVSFK+TLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI
Sbjct: 1  MASGGAA-AGGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60

Query: 61 ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 95
          ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG
Sbjct: 61 ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 93
[Close]
BLAST of Spo10832.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSL8_SPIOL (Ubiquitin-fold modifier 1 OS=Spinacia oleracea GN=SOVF_152800 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.600e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60
           MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI
Sbjct: 1   MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60

Query: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF
Sbjct: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 100
[Close]
BLAST of Spo10832.1 vs. UniProtKB/TrEMBL
Match: J3L845_ORYBR (Ubiquitin-fold modifier 1 OS=Oryza brachyantha PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.800e-42
Identity = 91/99 (91.92%), Postives = 91/99 (91.92%), Query Frame = 1 

		  

Query: 2   ASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII 61
           A   A  AGGGGKVSFKI LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII
Sbjct: 4   AGSGAGAAGGGGKVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII 63

Query: 62  TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG L TSF
Sbjct: 64  TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALGTSF 102
[Close]
BLAST of Spo10832.1 vs. UniProtKB/TrEMBL
Match: A0A0V0GRY8_SOLCH (Ubiquitin-fold modifier 1 OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.300e-41
Identity = 92/100 (92.00%), Postives = 93/100 (93.00%), Query Frame = 1 

		  

Query: 1   MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60
           MASG  A  GGGGKVSFK+TLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI
Sbjct: 1   MASGGGA--GGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60

Query: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG L  SF
Sbjct: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALWISF 98
[Close]
BLAST of Spo10832.1 vs. UniProtKB/TrEMBL
Match: M1D1J4_SOLTU (Ubiquitin-fold modifier 1 OS=Solanum tuberosum GN=PGSC0003DMG400030853 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.300e-41
Identity = 92/100 (92.00%), Postives = 93/100 (93.00%), Query Frame = 1 

		  

Query: 1   MASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60
           MASG  A  GGGGKVSFK+TLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI
Sbjct: 1   MASGGGA--GGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAI 60

Query: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG L  SF
Sbjct: 61  ITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALWISF 98
[Close]
BLAST of Spo10832.1 vs. UniProtKB/TrEMBL
Match: A0A0E0JTY9_ORYPU (Ubiquitin-fold modifier 1 OS=Oryza punctata PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.300e-41
Identity = 90/99 (90.91%), Postives = 91/99 (91.92%), Query Frame = 1 

		  

Query: 2   ASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII 61
           A+G  A A GGGKVSFKI LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII
Sbjct: 6   AAGGGAGAAGGGKVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII 65

Query: 62  TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG L  SF
Sbjct: 66  TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALAASF 104
[Close]
BLAST of Spo10832.1 vs. ExPASy Swiss-Prot
Match: UFM1_ORYSJ (Ubiquitin-fold modifier 1 OS=Oryza sativa subsp. japonica GN=Os01g0962400 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.000e-42
Identity = 89/99 (89.90%), Postives = 89/99 (89.90%), Query Frame = 1 

		  

Query: 2   ASGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII 61
           A G  A A GGGKVSFKI LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII
Sbjct: 4   AGGGGAGAAGGGKVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAII 63

Query: 62  TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTLRTSF 101
           TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG L   F
Sbjct: 64  TNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALAAPF 102
[Close]
BLAST of Spo10832.1 vs. ExPASy Swiss-Prot
Match: UFM1_ARATH (Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana GN=At1g77710 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.700e-40
Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 1 

		  

Query: 12 GGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQ 71
          GGKVSFK+TLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQ
Sbjct: 4  GGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGINPQ 63

Query: 72 QSAGNVFLKHGSELRLIPRDRVGTL 97
          QSAGNVFLKHGSELRLIPRDRVG +
Sbjct: 64 QSAGNVFLKHGSELRLIPRDRVGAV 88
[Close]
BLAST of Spo10832.1 vs. ExPASy Swiss-Prot
Match: UFM1_CHLIN (Ubiquitin-fold modifier 1 OS=Chlamydomonas incerta GN=PR46a PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.700e-37
Identity = 79/92 (85.87%), Postives = 83/92 (90.22%), Query Frame = 1 

		  

Query: 3  SGAAAPAGGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIIT 62
          S    PA G  KV+FK+TLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIIT
Sbjct: 2  SQQTTPAPGVTKVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIIT 61

Query: 63 NDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 95
          NDGVGINPQQ+AGNVFLKHGSELRLIPRDRVG
Sbjct: 62 NDGVGINPQQTAGNVFLKHGSELRLIPRDRVG 93
[Close]
BLAST of Spo10832.1 vs. ExPASy Swiss-Prot
Match: UFM1_CHLRE (Ubiquitin-fold modifier 1 OS=Chlamydomonas reinhardtii GN=PR46a PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.400e-36
Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 1 

		  

Query: 14 KVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 73
          KV+FK+TLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ 
Sbjct: 10 KVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINPQQI 69

Query: 74 AGNVFLKHGSELRLIPRDRVG 95
          AGNVFLKHGSELRLIPRDRVG
Sbjct: 70 AGNVFLKHGSELRLIPRDRVG 90
[Close]
BLAST of Spo10832.1 vs. ExPASy Swiss-Prot
Match: UFM1_AEDAE (Ubiquitin-fold modifier 1 OS=Aedes aegypti GN=AAEL006251 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.100e-36
Identity = 74/82 (90.24%), Postives = 79/82 (96.34%), Query Frame = 1 

		  

Query: 14 KVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 73
          KV+FKITLTSDPKLPFKV SVPEA PFTAVLKFAAEEFKVPP TSAIIT+DG+GINPQQ+
Sbjct: 4  KVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFKVPPATSAIITDDGIGINPQQT 63

Query: 74 AGNVFLKHGSELRLIPRDRVGT 96
          AGNVFLKHGSELRLIPRDRVG+
Sbjct: 64 AGNVFLKHGSELRLIPRDRVGS 85
[Close]
BLAST of Spo10832.1 vs. TAIR (Arabidopsis)
Match: AT1G77710.1 (Ubiquitin-like, Ufm1 (InterPro:IPR005375))

HSP 1 Score: 164.9 bits (416), Expect = 2.600e-41
Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 1 

		  

Query: 12 GGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQ 71
          GGKVSFK+TLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQ
Sbjct: 4  GGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGINPQ 63

Query: 72 QSAGNVFLKHGSELRLIPRDRVGTL 97
          QSAGNVFLKHGSELRLIPRDRVG +
Sbjct: 64 QSAGNVFLKHGSELRLIPRDRVGAV 88
The following BLAST results are available for this feature:
BLAST of Spo10832.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902180310|gb|KNA09531.1|2.3e-47100.hypothetical protein SOVF_1528... [more]
gi|573915401|ref|XP_006645355.1|1.1e-4191.9PREDICTED: ubiquitin-fold modi... [more]
gi|565397777|ref|XP_006364461.1|1.9e-4192.0PREDICTED: ubiquitin-fold modi... [more]
gi|747046120|ref|XP_011097797.1|2.5e-4194.6PREDICTED: ubiquitin-fold modi... [more]
gi|118484173|gb|ABK93968.1|3.2e-4196.8unknown [Populus trichocarpa][more]
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BLAST of Spo10832.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSL8_SPIOL1.6e-47100.Ubiquitin-fold modifier 1 OS=S... [more]
J3L845_ORYBR7.8e-4291.9Ubiquitin-fold modifier 1 OS=O... [more]
A0A0V0GRY8_SOLCH1.3e-4192.0Ubiquitin-fold modifier 1 OS=S... [more]
M1D1J4_SOLTU1.3e-4192.0Ubiquitin-fold modifier 1 OS=S... [more]
A0A0E0JTY9_ORYPU2.3e-4190.9Ubiquitin-fold modifier 1 OS=O... [more]
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BLAST of Spo10832.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UFM1_ORYSJ1.0e-4289.9Ubiquitin-fold modifier 1 OS=O... [more]
UFM1_ARATH4.7e-4094.1Ubiquitin-fold modifier 1 OS=A... [more]
UFM1_CHLIN3.7e-3785.8Ubiquitin-fold modifier 1 OS=C... [more]
UFM1_CHLRE2.4e-3692.5Ubiquitin-fold modifier 1 OS=C... [more]
UFM1_AEDAE3.1e-3690.2Ubiquitin-fold modifier 1 OS=A... [more]
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BLAST of Spo10832.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G77710.12.6e-4194.1Ubiquitin-like, Ufm1 (InterPro... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005375Ubiquitin-fold modifier 1PIRPIRSF038027Ufm1coord: 1..96
score: 5.6
IPR005375Ubiquitin-fold modifier 1PFAMPF03671Ufm1coord: 14..88
score: 1.5
NoneNo IPR availableGENE3D3.10.20.90coord: 13..95
score: 2.9
NoneNo IPR availablePANTHERPTHR15825FAMILY NOT NAMEDcoord: 1..94
score: 1.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo005800.66Barchart | Table