Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAACTGTAAAAAGAGAAAGGAAGTTGATCAACTCTGAAGTTTGAGGAGAGGAAGAAGAAACATGGAGGAGGAGCTGCGTGGCATACTATCGGAACGAGGGCTGTCCGTTTCAAGTTTGCCGGAAAAAGGACGTTGTCTTCTCACCACCAACCATTTTTCTCCAGGTCTGTTTATTTTCTATAGTCCATGAAATACTGATTAAGCAAGGAATGCAGGTAAGGTGTTTGTGACAATGACCCAACAAAACCAAATAGCAAATTACACTGCTTCTGAATGGGGAAACCTTATTGAGGCAATAACATGTATCTTTCTATGGTGCAGGAGAGATTATTATAAGCCAAGAACCTTATGTTTCTGTGCCGAATCACTCAAGATGTGAAGTGTGTTTTGGTTCTGATAAATTGAAGAAGTGCGCTGCTTGTCATTTTGTGTGGTATTGTGGGAGTAAATGCCAGGTTTTTTTTACTTAAATGTCACTAAAATCCACAGTTATATGATCTTTGTAACTTTACAGTTTGACTGATACATGAAACGAATACCATTTGTTGTTTTCCGGCCAGAAAGCAGATTGGACGTTGCATCGTGTTGAATGTCAAGCACTCTCAAAGCTTGAGAAGGAGAGGCAAAAATACCTTACACCCTCTATACGCTTAATGGTAAAGCTCTACTTGAGAAGAAAGCTTCAGGATCAAAAGGTGGACTATCTTGCATTTCTTGCAACTGTGTTTACAAATTCAACTCTTTAAAGAAACTCTTTATGTCATTCCTGCAAAGAATTGATTTAGTTATGCTGGAAAACTATCTGATCATGACTGGTGAGTTGATTTCTTGTGGCAGGTTATACCAAATACTGTGACCGACAACTACAACTTGGTGGAGGCATTAGTATCTCGTATCCTCTTGCCTACTTTGCTAAATGCGTGGAACCATTTTTTGGGGAGGTTATCCTGGAATTAAGTAATAATTGACTGAGAAAAGAAGCTGGAATTGGGTGCTTCATATTTAGTAACTCATCGTTTTCTAAACATGGTCTTATCATAACCTTTATGGGTTTTTCTTAACCATATTACCTTCTAAGATATGTCTGAGATTGATGAGAAGCAGCTGGTTTTATATGCACAGATGGCCAACCTTGTTAGCGTGATTCTTCAATGGCCTGACCTGAAACTAAAAGAAGTTACAGAGAACTTTTCCAAGGTTTCCATTGAAACTCGTACTTGGCTAGTTTTCATTGTTTGAATATATGCATGCACAGATGCACTAGATATACTCTGATATTATTGCAGAATCTAGTAGTGCTTAGACTTCCAGTCAACCAATGTAAAAGTTATGGTTGGCTTTATATGTTGGCTTTTTAGAATGTTTACATCAATTTGTTACTCGTGTAACCTAAAGCACCTTATTCAATTGTGAAATCCAAGTAGGTTTAAAATGTTTAATGAGAGATACTTCGTAATTTAGTTCTTTGTTACTAGAAAAATCTCAAATTTGTGAGTTTGGGCAACCTATCTTTCATTCACTAATTGTTTTATGCTGTTGCAGCTTGCTTGCAATGCACATAGTATTTGTGATTCAGAACTTAGACCTCTGGGTACAGGACTATATCCTGTGATATCTGTCATCAACCACAGGTGATCTGGCTACGTTATTGTCTGTTGTTTGTAAATCTCTGGAAATGTATATGCTAATTGGTTATAGTATTTCAGTTGCTTGCCAAATGCGGTTTTGATGTTTGAGGGAAAAACAGCTGTGGTGCGTGCGGTGCAACCTATACCTAAAGGTAGTGAGGTACTAAAACCATATGACTTGTGCTACTCCATTTCCTTTGTTGCAATTACTTCAATATGTGTGAAAGTAGCAGTATTTGAGATGAGTCGCTTTCCCCAAAAAATTGGGAAAGAGAACAAAAGGGGGACATACTGAAGTCTGATTGTTCTTTGTCTTCTGATATTCTTGAAGGTTCTAATAAGCTATATAGAAACTGCTGGAAGCACCATGACTCGACAAAAGGCTCTAAATGAACAGTACTTCTTCAACTGCTCGTGCCCTCGTTGCATGAATTTAGTAAGTGCGTAAAATAATATCATTGTACATAATCACACTGAAGTTTATCCTTATAGTTTGTTACTTTCTGTTATTTTAACTTTTCTGTTTTTTACTTCAATCCATAATACCATATTGAAGGGGCAATGTGAAGATATTCAAGAAAGTGCCGTTCTGGAAGGTTATAGGTGTGATGCTAATACATGCACGGGCTTTTTGCTTCGGGATCCAGGTACACGCTTTCTTTAGCAAGTGCATAAACACTACTTGGGTTTCTATCATCAGTATCTTTTTTCCGATATGCAGACAACAAGGCATTCATATGCCAACAATGTGGCCGGTTGAGGAAACTGGAAGATATTAAACAGATTGCAAGTGAAGTGAAAAGCTTTTCTGAAAAGGCAGCAACTGCCCTTAAATCAGGAAGTATCCTTTCTGATGTCTTTTTTAGGAAACCAATAAATTAGGAATTGTTTTGATGACTTCCTGTTGCATAGTGTTGTTTTTGTTGTGTACTCACCCCCACCCCCTACCTGTTCATTCCATTATTTCCAAATGGAGGTGTTTCTTTGACAGAGTTCAGATTATGAAGAAGCTGGTTCTTTGTACAAGACAGTTGAAAAGCTACAGTTGAAATTATGTCATCCATTATCTCTTAATCTAATGAGCACACGAGAGAGTCTCTTAAAGGTACATCATTAACTTGTATGACTTCTCTTCTTGCAGTAAGATCTTAGTGCAGAATCACCTATTTTACAATGCAGTGTATAAACTTATTTTCAGATTTTAATATGCAACATATTTGTCGATGTATTATTTTATCATCAGATATTCATGGAGCTGAACAACTGGAAGGACGCACTGGTTTATTGCAGAATGACCATCCCTGTATATGAAAGTAATTCTCGGTGTTTCTGGTTGTCTCTCTCAATCTATAGGATATCTTTTCTTGTCAACTTTTCTGACAATCTAGGGAATTTATCTTACAGAGGCCTACCCTGGTTGTCATCCTATGCTTGGATTGCAGTATTATACATGTGGAAAATTAGAATGGTAAGAGTATGGTCTCTCTTAATGTTAAGCACCTTGTGTTAATTTCTTCTAAACGTTGTATTGTGTGATTATTTTTTTGCCTCAAACGACAAACATGAATAGAATTCTCAAAATGCTTTGATCTAGAAGAGGTTATGCTCCTCTGATAAATTTCCCATAGAACTGTACGTATATTCCTTATTGAAAAACACGGTGCGCATACAGGTTACTTGAGGAAACTGGGAATTGTATTAGATCATTAACCAAGGCATTCGATATATTGCGAGTGACACATGGGACAAACACGCCATTTATGAAGGAGCTGCTTGCCAAGCTGGAGGAAGCCCATGCTGAAGCCTCTTTTCACACTCAAACCCATTGATGAGGACTGAAGATATGTATGCTACAAGGATCAATAATACATCCCTTGCCTAATTGCTTCTGAGAGGATTAGTTTCTGCTTTTCACTTTTCAGCGTTCCTTTGGGGTTTAAGTATTTAACCCAATAAAGGAGTTGAAAACTGTACTGAAGTACTTAAATATTTATTTACTGTACTTGATTACTTGAGTTGAAAACTGTAATCTTAAACTACTCCAAAATAAACAATAGGTAGGAACTTCAAGGCAGTAAATAAATGATGAAAATGACACAAGTCTACTGCTCCAATACCTTGTCTGCAAATTTAGATTGGATTTCATTCTCATACTATTTCAACCAAATCAGAAACAAACCAACCCAAACCAAACCAGCAAAATAACATTTTCAACAAAAATATACAAGGACACTATTTCACTTTAAAACAAAAGAGGAGCTACATTCATTTCTTGGAAATTACAGGATTGTACAACCATCATAATCTATGATTCTACCAGTCTGTTGAAAGGCGC TTTAACTGTAAAAAGAGAAAGGAAGTTGATCAACTCTGAAGTTTGAGGAGAGGAAGAAGAAACATGGAGGAGGAGCTGCGTGGCATACTATCGGAACGAGGGCTGTCCGTTTCAAGTTTGCCGGAAAAAGGACGTTGTCTTCTCACCACCAACCATTTTTCTCCAGGAGAGATTATTATAAGCCAAGAACCTTATGTTTCTGTGCCGAATCACTCAAGATGTGAAGTGTGTTTTGGTTCTGATAAATTGAAGAAGTGCGCTGCTTGTCATTTTGTGTGGTATTGTGGGAGTAAATGCCAGAAAGCAGATTGGACGTTGCATCGTGTTGAATGTCAAGCACTCTCAAAGCTTGAGAAGGAGAGGCAAAAATACCTTACACCCTCTATACGCTTAATGGTAAAGCTCTACTTGAGAAGAAAGCTTCAGGATCAAAAGGTTATACCAAATACTGTGACCGACAACTACAACTTGGTGGAGGCATTAGTATCTCATATGTCTGAGATTGATGAGAAGCAGCTGGTTTTATATGCACAGATGGCCAACCTTGTTAGCGTGATTCTTCAATGGCCTGACCTGAAACTAAAAGAAGTTACAGAGAACTTTTCCAAGCTTGCTTGCAATGCACATAGTATTTGTGATTCAGAACTTAGACCTCTGGGTACAGGACTATATCCTGTGATATCTGTCATCAACCACAGTTGCTTGCCAAATGCGGTTTTGATGTTTGAGGGAAAAACAGCTGTGGTGCGTGCGGTGCAACCTATACCTAAAGGTAGTGAGGTTCTAATAAGCTATATAGAAACTGCTGGAAGCACCATGACTCGACAAAAGGCTCTAAATGAACAGTACTTCTTCAACTGCTCGTGCCCTCGTTGCATGAATTTAGGGCAATGTGAAGATATTCAAGAAAGTGCCGTTCTGGAAGGTTATAGGTGTGATGCTAATACATGCACGGGCTTTTTGCTTCGGGATCCAGACAACAAGGCATTCATATGCCAACAATGTGGCCGGTTGAGGAAACTGGAAGATATTAAACAGATTGCAAGTGAAGTGAAAAGCTTTTCTGAAAAGGCAGCAACTGCCCTTAAATCAGGAAATTATGAAGAAGCTGGTTCTTTGTACAAGACAGTTGAAAAGCTACAGTTGAAATTATGTCATCCATTATCTCTTAATCTAATGAGCACACGAGAGAGTCTCTTAAAGATATTCATGGAGCTGAACAACTGGAAGGACGCACTGGTTTATTGCAGAATGACCATCCCTGTATATGAAAAGGCCTACCCTGGTTGTCATCCTATGCTTGGATTGCAGTATTATACATGTGGAAAATTAGAATGGTTACTTGAGGAAACTGGGAATTGTATTAGATCATTAACCAAGGCATTCGATATATTGCGAGTGACACATGGGACAAACACGCCATTTATGAAGGAGCTGCTTGCCAAGCTGGAGGAAGCCCATGCTGAAGCCTCTTTTCACACTCAAACCCATTGATGAGGACTGAAGATATGTATGCTACAAGGATCAATAATACATCCCTTGCCTAATTGCTTCTGAGAGGATTAGTTTCTGCTTTTCACTTTTCAGCGTTCCTTTGGGGTTTAAGTATTTAACCCAATAAAGGAGTTGAAAACTGTACTGAAGTACTTAAATATTTATTTACTGTACTTGATTACTTGAGTTGAAAACTGTAATCTTAAACTACTCCAAAATAAACAATAGGTAGGAACTTCAAGGCAGTAAATAAATGATGAAAATGACACAAGTCTACTGCTCCAATACCTTGTCTGCAAATTTAGATTGGATTTCATTCTCATACTATTTCAACCAAATCAGAAACAAACCAACCCAAACCAAACCAGCAAAATAACATTTTCAACAAAAATATACAAGGACACTATTTCACTTTAAAACAAAAGAGGAGCTACATTCATTTCTTGGAAATTACAGGATTGTACAACCATCATAATCTATGATTCTACCAGTCTGTTGAAAGGCGC ATGGAGGAGGAGCTGCGTGGCATACTATCGGAACGAGGGCTGTCCGTTTCAAGTTTGCCGGAAAAAGGACGTTGTCTTCTCACCACCAACCATTTTTCTCCAGGAGAGATTATTATAAGCCAAGAACCTTATGTTTCTGTGCCGAATCACTCAAGATGTGAAGTGTGTTTTGGTTCTGATAAATTGAAGAAGTGCGCTGCTTGTCATTTTGTGTGGTATTGTGGGAGTAAATGCCAGAAAGCAGATTGGACGTTGCATCGTGTTGAATGTCAAGCACTCTCAAAGCTTGAGAAGGAGAGGCAAAAATACCTTACACCCTCTATACGCTTAATGGTAAAGCTCTACTTGAGAAGAAAGCTTCAGGATCAAAAGGTTATACCAAATACTGTGACCGACAACTACAACTTGGTGGAGGCATTAGTATCTCATATGTCTGAGATTGATGAGAAGCAGCTGGTTTTATATGCACAGATGGCCAACCTTGTTAGCGTGATTCTTCAATGGCCTGACCTGAAACTAAAAGAAGTTACAGAGAACTTTTCCAAGCTTGCTTGCAATGCACATAGTATTTGTGATTCAGAACTTAGACCTCTGGGTACAGGACTATATCCTGTGATATCTGTCATCAACCACAGTTGCTTGCCAAATGCGGTTTTGATGTTTGAGGGAAAAACAGCTGTGGTGCGTGCGGTGCAACCTATACCTAAAGGTAGTGAGGTTCTAATAAGCTATATAGAAACTGCTGGAAGCACCATGACTCGACAAAAGGCTCTAAATGAACAGTACTTCTTCAACTGCTCGTGCCCTCGTTGCATGAATTTAGGGCAATGTGAAGATATTCAAGAAAGTGCCGTTCTGGAAGGTTATAGGTGTGATGCTAATACATGCACGGGCTTTTTGCTTCGGGATCCAGACAACAAGGCATTCATATGCCAACAATGTGGCCGGTTGAGGAAACTGGAAGATATTAAACAGATTGCAAGTGAAGTGAAAAGCTTTTCTGAAAAGGCAGCAACTGCCCTTAAATCAGGAAATTATGAAGAAGCTGGTTCTTTGTACAAGACAGTTGAAAAGCTACAGTTGAAATTATGTCATCCATTATCTCTTAATCTAATGAGCACACGAGAGAGTCTCTTAAAGATATTCATGGAGCTGAACAACTGGAAGGACGCACTGGTTTATTGCAGAATGACCATCCCTGTATATGAAAAGGCCTACCCTGGTTGTCATCCTATGCTTGGATTGCAGTATTATACATGTGGAAAATTAGAATGGTTACTTGAGGAAACTGGGAATTGTATTAGATCATTAACCAAGGCATTCGATATATTGCGAGTGACACATGGGACAAACACGCCATTTATGAAGGAGCTGCTTGCCAAGCTGGAGGAAGCCCATGCTGAAGCCTCTTTTCACACTCAAACCCATTGA MEEELRGILSERGLSVSSLPEKGRCLLTTNHFSPGEIIISQEPYVSVPNHSRCEVCFGSDKLKKCAACHFVWYCGSKCQKADWTLHRVECQALSKLEKERQKYLTPSIRLMVKLYLRRKLQDQKVIPNTVTDNYNLVEALVSHMSEIDEKQLVLYAQMANLVSVILQWPDLKLKEVTENFSKLACNAHSICDSELRPLGTGLYPVISVINHSCLPNAVLMFEGKTAVVRAVQPIPKGSEVLISYIETAGSTMTRQKALNEQYFFNCSCPRCMNLGQCEDIQESAVLEGYRCDANTCTGFLLRDPDNKAFICQQCGRLRKLEDIKQIASEVKSFSEKAATALKSGNYEEAGSLYKTVEKLQLKLCHPLSLNLMSTRESLLKIFMELNNWKDALVYCRMTIPVYEKAYPGCHPMLGLQYYTCGKLEWLLEETGNCIRSLTKAFDILRVTHGTNTPFMKELLAKLEEAHAEASFHTQTH Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10856.1 vs. NCBI nr
Match: gi|902180304|gb|KNA09525.1| (hypothetical protein SOVF_152750 [Spinacia oleracea]) HSP 1 Score: 972.6 bits (2513), Expect = 2.500e-280 Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 1
BLAST of Spo10856.1 vs. NCBI nr
Match: gi|731310605|ref|XP_010694872.1| (PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 793.5 bits (2048), Expect = 2.000e-226 Identity = 389/477 (81.55%), Postives = 420/477 (88.05%), Query Frame = 1
BLAST of Spo10856.1 vs. NCBI nr
Match: gi|870869259|gb|KMT20004.1| (hypothetical protein BVRB_1g000260 isoform A [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 770.8 bits (1989), Expect = 1.400e-219 Identity = 381/477 (79.87%), Postives = 411/477 (86.16%), Query Frame = 1
BLAST of Spo10856.1 vs. NCBI nr
Match: gi|731310613|ref|XP_010666085.1| (PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 761.5 bits (1965), Expect = 8.600e-217 Identity = 377/477 (79.04%), Postives = 407/477 (85.32%), Query Frame = 1
BLAST of Spo10856.1 vs. NCBI nr
Match: gi|731310615|ref|XP_010666643.1| (PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 718.8 bits (1854), Expect = 6.400e-204 Identity = 350/426 (82.16%), Postives = 379/426 (88.97%), Query Frame = 1
BLAST of Spo10856.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQI4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_152750 PE=4 SV=1) HSP 1 Score: 972.6 bits (2513), Expect = 1.700e-280 Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 1
BLAST of Spo10856.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1J9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g000260 PE=4 SV=1) HSP 1 Score: 793.5 bits (2048), Expect = 1.400e-226 Identity = 389/477 (81.55%), Postives = 420/477 (88.05%), Query Frame = 1
BLAST of Spo10856.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D6P6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g000260 PE=4 SV=1) HSP 1 Score: 770.8 bits (1989), Expect = 9.900e-220 Identity = 381/477 (79.87%), Postives = 411/477 (86.16%), Query Frame = 1
BLAST of Spo10856.1 vs. UniProtKB/TrEMBL
Match: E0CRB7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g03730 PE=4 SV=1) HSP 1 Score: 708.4 bits (1827), Expect = 6.000e-201 Identity = 339/472 (71.82%), Postives = 399/472 (84.53%), Query Frame = 1
BLAST of Spo10856.1 vs. UniProtKB/TrEMBL
Match: A0A067GM08_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011626mg PE=4 SV=1) HSP 1 Score: 696.8 bits (1797), Expect = 1.800e-197 Identity = 328/473 (69.34%), Postives = 395/473 (83.51%), Query Frame = 1
BLAST of Spo10856.1 vs. ExPASy Swiss-Prot
Match: ASHR1_ARATH (Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana GN=ASHR1 PE=2 SV=2) HSP 1 Score: 624.0 bits (1608), Expect = 1.300e-177 Identity = 292/472 (61.86%), Postives = 380/472 (80.51%), Query Frame = 1
BLAST of Spo10856.1 vs. ExPASy Swiss-Prot
Match: SMY2A_DANRE (N-lysine methyltransferase SMYD2-A OS=Danio rerio GN=smyd2a PE=2 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.000e-40 Identity = 124/464 (26.72%), Postives = 213/464 (45.91%), Query Frame = 1
BLAST of Spo10856.1 vs. ExPASy Swiss-Prot
Match: SMY2A_XENLA (N-lysine methyltransferase SMYD2-A OS=Xenopus laevis GN=smyd2-a PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.400e-40 Identity = 126/460 (27.39%), Postives = 211/460 (45.87%), Query Frame = 1
BLAST of Spo10856.1 vs. ExPASy Swiss-Prot
Match: SMYD2_CHICK (N-lysine methyltransferase SMYD2 OS=Gallus gallus GN=SMYD2 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.400e-40 Identity = 120/461 (26.03%), Postives = 210/461 (45.55%), Query Frame = 1
BLAST of Spo10856.1 vs. ExPASy Swiss-Prot
Match: SMYD2_PIG (N-lysine methyltransferase SMYD2 OS=Sus scrofa GN=SMYD2 PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.700e-39 Identity = 125/460 (27.17%), Postives = 208/460 (45.22%), Query Frame = 1
BLAST of Spo10856.1 vs. TAIR (Arabidopsis)
Match: AT2G17900.1 (SET domain group 37) HSP 1 Score: 624.0 bits (1608), Expect = 7.500e-179 Identity = 292/472 (61.86%), Postives = 380/472 (80.51%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10856.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo10856.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo10856.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo10856.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|