Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCACTTGGAGTGGAAACTGATCCCGGAGAACCTTGGATAGTTGATCATATTGACTGGGATCCATTATCTAGTGGTGAAGGTGATTTGCTTTTAGATGATATGGCAAAAGCATTTGCCGAGTCTGCAAAAGTCTCTCAAACCATGAAAGGCGTTGTTTCTTCTTCTATAGTTAATCATATGTAATCACATGGTTTACATGTAAATAACATAGGCTATACAACTCCCAAGGATCTCGAGGTGTCAAAAAAGACAGATAAGCCGGAGAATGAGCCTACTTCTTTGTGGAGCAGTCTATTGGATCAACAGGGGAATAATTTCGAAGATTCTCTGCAGGCAGTCCTTCCCGATTCTTCTGTTGCTTGCTCTAATGTTGAGGATTTCCGAAATTATTCTACAAAACCTCTGCTGGAGGCTAAGAACTCCTATGTACTGGAGACCACAACCTCTATAGCATCGCATGTATTAGAGCCGCCAGATCATGTTAATAATGCTGATATTGTGCAGTTAAGTGATAGTATGAAGGAAATAATCTCTAAGGATTATGGCTTGGATGTAGGCTGTATTGCTATTTCAAGAAAGGAAGTCTTAATGGAATCTGAGGGTCTTAATTGTAACGGTCAGCAAACTGATAAATTGAAGCTAGCTTCTGGTCTTGTGAACAGGATAGACGCTGGGATCCCAACTGAGATGCAATTATGTGATCAGTCAGATTCATCACTTCTTCCTGACATATCCCTGGGTGGAAATCTGCTGGAGCTAAAAGAGGATACAGTAGCCGAAAAAAATGCTAGAAATGTGATGGTTTTGGACTCCTTTTCCGAGGGGAGTAGTAGTGATGGTTTACCAATACTTCGTGACCGGCAATTGCTGGAAGAGGTGGAAGAAATTAAAGAGCAGAAGGGAAATCGCATTGAAGTCAACACTGGCTCCGATAATTTTATAGTTGAGGATACCATGATGTTATTGGATTCACTCCAGCAGGGAAAAAAAGGCAATGATCATTTAGTTGCAAAAAGTACACTATCAGATGAAATGATGGAATGTAGAAAACAAGTAAAAGAGCTTAGTGAAGCTGAGCATCAACCACTTGGTGAAAATAAATCAGGTGATGTATTGATGTTATCTTGTGATGTGTAATTAGTTTATTGTTTCGTTTGGTTTTCTTTTGTATTGTGTATTTCTTTGTAAATAGCTTGACACCTATCAGCATGCATTATATTTTTCATGTAATCCGCCCCAATTAGTTTTTTCTCAGCTGTTAATTTGTTAACGAAGATTAGAAAGATGCATCAATAGTCAATACAGATTATGAAGAAGCAGCATTTTCAAGTTGGAATTAGAGACTCTTATGTTTGTTTTATGTTTCTCATCAGCTAAAGACACTTTGATATCTTTCTGTATTATGTCTGTGTTGACTGTTTTCATGCTGTAAAATGCAGGCAATCATAAGGTGAAGCGATGGGGTACAGGCCAAGTTCTTAGGTTTCCTTTTAAACGATTGTTACAAGTTCAATTTAAGAAGAAAAGGAAAACTTCCATGTACAAGATCCAAAAGAGGTTAGTGTAGGAGATGTTCTAAAATTCTTAAGCGGTGTTGTAGTTGATGTAACGTATAGCAGTGCATACAAATTTATGAGATTCGTAATTACCAGTTATCGTTTATATCATGGACGCTTGCAAGTTGCAACTTACATTTTGTCAAAATTTAATTTATAATACTGAGCTCACATTTCCAAGTCTTAAAACTGCGTTTCTTCTTTTTCTCTGGCCTAGCAGATAA ATGCCACTTGGAGTGGAAACTGATCCCGGAGAACCTTGGATAGTTGATCATATTGACTGGGATCCATTATCTAGTGGTGAAGGCTATACAACTCCCAAGGATCTCGAGGTGTCAAAAAAGACAGATAAGCCGGAGAATGAGCCTACTTCTTTGTGGAGCAGTCTATTGGATCAACAGGGGAATAATTTCGAAGATTCTCTGCAGGCAGTCCTTCCCGATTCTTCTGTTGCTTGCTCTAATGTTGAGGATTTCCGAAATTATTCTACAAAACCTCTGCTGGAGGCTAAGAACTCCTATGTACTGGAGACCACAACCTCTATAGCATCGCATGTATTAGAGCCGCCAGATCATGTTAATAATGCTGATATTGTGCAGATAGACGCTGGGATCCCAACTGAGATGCAATTATGTGATCAGTCAGATTCATCACTTCTTCCTGACATATCCCTGGGTGGAAATCTGCTGGAGCTAAAAGAGGATACAGTAGCCGAAAAAAATGCTAGAAATGTGATGGTTTTGGACTCCTTTTCCGAGGGGAGTAGTAGTGATGGTTTACCAATACTTCGTGACCGGCAATTGCTGGAAGAGGTGGAAGAAATTAAAGAGCAGAAGGGAAATCGCATTGAAGTCAACACTGGCTCCGATAATTTTATAGTTGAGGATACCATGATGTTATTGGATTCACTCCAGCAGGGAAAAAAAGGCAATGATCATTTAGTTGCAAAAAGTACACTATCAGATGAAATGATGGAATGTAGAAAACAAGTAAAAGAGCTTAGTGAAGCTGAGCATCAACCACTTGGTGAAAATAAATCAGGCAATCATAAGGTGAAGCGATGGGGTACAGGCCAAGTTCTTAGGTTTCCTTTTAAACGATTGTTACAAGTTCAATTTAAGAAGAAAAGGAAAACTTCCATGTACAAGATCCAAAAGAGATAA ATGCCACTTGGAGTGGAAACTGATCCCGGAGAACCTTGGATAGTTGATCATATTGACTGGGATCCATTATCTAGTGGTGAAGGCTATACAACTCCCAAGGATCTCGAGGTGTCAAAAAAGACAGATAAGCCGGAGAATGAGCCTACTTCTTTGTGGAGCAGTCTATTGGATCAACAGGGGAATAATTTCGAAGATTCTCTGCAGGCAGTCCTTCCCGATTCTTCTGTTGCTTGCTCTAATGTTGAGGATTTCCGAAATTATTCTACAAAACCTCTGCTGGAGGCTAAGAACTCCTATGTACTGGAGACCACAACCTCTATAGCATCGCATGTATTAGAGCCGCCAGATCATGTTAATAATGCTGATATTGTGCAGATAGACGCTGGGATCCCAACTGAGATGCAATTATGTGATCAGTCAGATTCATCACTTCTTCCTGACATATCCCTGGGTGGAAATCTGCTGGAGCTAAAAGAGGATACAGTAGCCGAAAAAAATGCTAGAAATGTGATGGTTTTGGACTCCTTTTCCGAGGGGAGTAGTAGTGATGGTTTACCAATACTTCGTGACCGGCAATTGCTGGAAGAGGTGGAAGAAATTAAAGAGCAGAAGGGAAATCGCATTGAAGTCAACACTGGCTCCGATAATTTTATAGTTGAGGATACCATGATGTTATTGGATTCACTCCAGCAGGGAAAAAAAGGCAATGATCATTTAGTTGCAAAAAGTACACTATCAGATGAAATGATGGAATGTAGAAAACAAGTAAAAGAGCTTAGTGAAGCTGAGCATCAACCACTTGGTGAAAATAAATCAGGCAATCATAAGGTGAAGCGATGGGGTACAGGCCAAGTTCTTAGGTTTCCTTTTAAACGATTGTTACAAGTTCAATTTAAGAAGAAAAGGAAAACTTCCATGTACAAGATCCAAAAGAGATAA MPLGVETDPGEPWIVDHIDWDPLSSGEGYTTPKDLEVSKKTDKPENEPTSLWSSLLDQQGNNFEDSLQAVLPDSSVACSNVEDFRNYSTKPLLEAKNSYVLETTTSIASHVLEPPDHVNNADIVQIDAGIPTEMQLCDQSDSSLLPDISLGGNLLELKEDTVAEKNARNVMVLDSFSEGSSSDGLPILRDRQLLEEVEEIKEQKGNRIEVNTGSDNFIVEDTMMLLDSLQQGKKGNDHLVAKSTLSDEMMECRKQVKELSEAEHQPLGENKSGNHKVKRWGTGQVLRFPFKRLLQVQFKKKRKTSMYKIQKR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10941.1 vs. NCBI nr
Match: gi|902238538|gb|KNA25219.1| (hypothetical protein SOVF_008510, partial [Spinacia oleracea]) HSP 1 Score: 180.6 bits (457), Expect = 4.100e-42 Identity = 96/144 (66.67%), Postives = 97/144 (67.36%), Query Frame = 1
BLAST of Spo10941.1 vs. NCBI nr
Match: gi|731349173|ref|XP_010685861.1| (PREDICTED: uncharacterized protein LOC104900192 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 156.4 bits (394), Expect = 8.300e-35 Identity = 101/191 (52.88%), Postives = 124/191 (64.92%), Query Frame = 1
BLAST of Spo10941.1 vs. NCBI nr
Match: gi|731349179|ref|XP_010685864.1| (PREDICTED: uncharacterized protein LOC104900192 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 156.4 bits (394), Expect = 8.300e-35 Identity = 101/191 (52.88%), Postives = 124/191 (64.92%), Query Frame = 1
BLAST of Spo10941.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1Z3_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_008510 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 2.900e-42 Identity = 96/144 (66.67%), Postives = 97/144 (67.36%), Query Frame = 1
BLAST of Spo10941.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BW39_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174800 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.800e-35 Identity = 101/191 (52.88%), Postives = 124/191 (64.92%), Query Frame = 1
BLAST of Spo10941.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZH4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174800 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.800e-35 Identity = 101/191 (52.88%), Postives = 124/191 (64.92%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10941.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 3
BLAST of Spo10941.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 3
BLAST of Spo10941.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo10941.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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