Spo11019 (gene)

Overview
NameSpo11019
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRING/U-box superfamily protein, putative
Locationchr4 : 117492973 .. 117493677 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACTGCACACCAGAAAATTACTCCCATTACTAGAAAACCATGATCCAACGTTGTTTACATCACCATCACAACATTCTCCGACTCTTTCGCCGTTAAAAGCTCAGGAGAAAGAAAATCCGACTAATTACTACAACAACGTTAAGTTGAACCCTCCGTTTGATTCGGCAATGGCGCTCACCGTTTTAGTGCTTTTGACGGCTCTGTTTTTTATGGGATTCTTTTCTATTTACATTCGCCGCTTCGCCGACGAGCCATCTTTTGACACCGCTCGTCGCCGACGAAACTCGTCCGGTACTAATACTGCAGCGACGTCGTATTTATCCAGGACGAGGGATACGACGAAAGGGGTGGATCCGGCGGTGGTGGAGTCATTGCCGGTGTATGCATACTTCCCTGGGGCTGAGGAAGCGAAGCAGCGGATGATTGATGAGGTTGAGTGTGCCATTTGTTTGAGTGAGTTCGAGGAGAAGGAATGGATAAAGGAGATTCCGTATTGTGGTCACGTGTTCCATGTTGAGTGTATTGACACGTGGCTTTCGAATCACATGACGTGTCCGCTTTGTCGGACGGCGAAACTATTGACTGAAGAGGAGGTGGCGGCAGAGAAGGAAAAGGCGGTGGCGGTGGCGGTGGAGGGAGAAGAGAGGGGATTGGATGCGGGTGAGGTGGAGCAGGGAGATGTAGATAGTAGTGGTGGCTGA

mRNA sequence

ATGACACTGCACACCAGAAAATTACTCCCATTACTAGAAAACCATGATCCAACGTTGTTTACATCACCATCACAACATTCTCCGACTCTTTCGCCGTTAAAAGCTCAGGAGAAAGAAAATCCGACTAATTACTACAACAACGTTAAGTTGAACCCTCCGTTTGATTCGGCAATGGCGCTCACCGTTTTAGTGCTTTTGACGGCTCTGTTTTTTATGGGATTCTTTTCTATTTACATTCGCCGCTTCGCCGACGAGCCATCTTTTGACACCGCTCGTCGCCGACGAAACTCGTCCGGTACTAATACTGCAGCGACGTCGTATTTATCCAGGACGAGGGATACGACGAAAGGGGTGGATCCGGCGGTGGTGGAGTCATTGCCGGTGTATGCATACTTCCCTGGGGCTGAGGAAGCGAAGCAGCGGATGATTGATGAGGTTGAGTGTGCCATTTGTTTGAGTGAGTTCGAGGAGAAGGAATGGATAAAGGAGATTCCGTATTGTGGTCACGTGTTCCATGTTGAGTGTATTGACACGTGGCTTTCGAATCACATGACGTGTCCGCTTTGTCGGACGGCGAAACTATTGACTGAAGAGGAGGTGGCGGCAGAGAAGGAAAAGGCGGTGGCGGTGGCGGTGGAGGGAGAAGAGAGGGGATTGGATGCGGGTGAGGTGGAGCAGGGAGATGTAGATAGTAGTGGTGGCTGA

Coding sequence (CDS)

ATGACACTGCACACCAGAAAATTACTCCCATTACTAGAAAACCATGATCCAACGTTGTTTACATCACCATCACAACATTCTCCGACTCTTTCGCCGTTAAAAGCTCAGGAGAAAGAAAATCCGACTAATTACTACAACAACGTTAAGTTGAACCCTCCGTTTGATTCGGCAATGGCGCTCACCGTTTTAGTGCTTTTGACGGCTCTGTTTTTTATGGGATTCTTTTCTATTTACATTCGCCGCTTCGCCGACGAGCCATCTTTTGACACCGCTCGTCGCCGACGAAACTCGTCCGGTACTAATACTGCAGCGACGTCGTATTTATCCAGGACGAGGGATACGACGAAAGGGGTGGATCCGGCGGTGGTGGAGTCATTGCCGGTGTATGCATACTTCCCTGGGGCTGAGGAAGCGAAGCAGCGGATGATTGATGAGGTTGAGTGTGCCATTTGTTTGAGTGAGTTCGAGGAGAAGGAATGGATAAAGGAGATTCCGTATTGTGGTCACGTGTTCCATGTTGAGTGTATTGACACGTGGCTTTCGAATCACATGACGTGTCCGCTTTGTCGGACGGCGAAACTATTGACTGAAGAGGAGGTGGCGGCAGAGAAGGAAAAGGCGGTGGCGGTGGCGGTGGAGGGAGAAGAGAGGGGATTGGATGCGGGTGAGGTGGAGCAGGGAGATGTAGATAGTAGTGGTGGCTGA

Protein sequence

MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTTKGVDPAVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDSSGG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11019.1Spo11019.1mRNA


Homology
[Close]
BLAST of Spo11019.1 vs. NCBI nr
Match: gi|902238593|gb|KNA25240.1| (hypothetical protein SOVF_008310 [Spinacia oleracea])

HSP 1 Score: 461.1 bits (1185), Expect = 1.200e-126
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1 

		  

Query: 1   MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL 60
           MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL
Sbjct: 1   MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL 60

Query: 61  TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTTKGVDP 120
           TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTTKGVDP
Sbjct: 61  TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTTKGVDP 120

Query: 121 AVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWL 180
           AVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWL
Sbjct: 121 AVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWL 180

Query: 181 SNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDSSGG 235
           SNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDSSGG
Sbjct: 181 SNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDSSGG 234
[Close]
BLAST of Spo11019.1 vs. NCBI nr
Match: gi|731371307|ref|XP_010666002.1| (PREDICTED: RING-H2 finger protein ATL57 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 252.3 bits (643), Expect = 8.300e-64
Identity = 149/243 (61.32%), Postives = 175/243 (72.02%), Query Frame = 1 

		  

Query: 1   MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL 60
           MT H R+LLPL E+H+PT F++ +   P+    K QE+ENPTNY   +KLNPPFDSAMAL
Sbjct: 1   MTTHIRRLLPLEEDHNPTFFSTKNDPPPS----KIQERENPTNY-TPLKLNPPFDSAMAL 60

Query: 61  TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNS-SGTNTAATSYL-SRTRD----T 120
           TVLVL+TALFFMGFFSIYIRRFAD+ S D  RRRR+S S   ++ TSYL SR RD    +
Sbjct: 61  TVLVLITALFFMGFFSIYIRRFADDSSVDPTRRRRSSNSAAGSSTTSYLTSRLRDGCSSS 120

Query: 121 TKGVDPAVVESLPVYAYFPGAEEA---KQRMIDEVECAICLSEFEEKEWIKEIPYCGHVF 180
            KGVDP VVESLPV+ YF G  +    K   IDE+ECAICLSEFEE+E +KEIPYCGHVF
Sbjct: 121 PKGVDPTVVESLPVHMYFGGDAKQGNIKNSNIDEMECAICLSEFEERELVKEIPYCGHVF 180

Query: 181 HVECIDTWLSNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDS 235
           HV CIDTW  +H+TCPLCRTA LL +     E+E+ V +A   EERGL   EVE     S
Sbjct: 181 HVGCIDTWFISHVTCPLCRTANLLVKVGGGKEEEQHVEIA---EERGLSVSEVE-----S 230
[Close]
BLAST of Spo11019.1 vs. NCBI nr
Match: gi|590587726|ref|XP_007016041.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 165.6 bits (418), Expect = 1.000e-37
Identity = 97/196 (49.49%), Postives = 126/196 (64.29%), Query Frame = 1 

		  

Query: 10  PLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMALTVLVLLTAL 69
           P L +H PT   S S      SPL + +K +        + N PFDS+MALT++VLLTAL
Sbjct: 24  PPLHHHRPTTTNSTS------SPLSSSKKLS--------QQNDPFDSSMALTIVVLLTAL 83

Query: 70  FFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTT--KGVDPAVVESLP 129
           FFMGFFSIYIRRF++EP+   +RRRR   G+    +    R   +T  KG+DP  V SLP
Sbjct: 84  FFMGFFSIYIRRFSEEPTAHLSRRRRYRGGSLDTLSLPSDRHHVSTPRKGLDPTTVGSLP 143

Query: 130 VYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCP 189
           VY+Y   A+        +++CAICLSEFEEKE +K IP C HVFHVECIDTWL++H++CP
Sbjct: 144 VYSYHGDAKY-------QIDCAICLSEFEEKECVKTIPCCEHVFHVECIDTWLTSHVSCP 198

Query: 190 LCRTAKLLTEEEVAAE 204
           +CR  +LL  +  A E
Sbjct: 204 VCRGTRLLEIKGGAGE 198
[Close]
BLAST of Spo11019.1 vs. NCBI nr
Match: gi|225436426|ref|XP_002273630.1| (PREDICTED: RING-H2 finger protein ATL57 [Vitis vinifera])

HSP 1 Score: 157.1 bits (396), Expect = 3.600e-35
Identity = 95/218 (43.58%), Postives = 135/218 (61.93%), Query Frame = 1 

		  

Query: 1   MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL 60
           M  HTRKLL     H  TL   P   S  ++P  +       +   N + N PFDS+MAL
Sbjct: 1   MEPHTRKLLLDDAGHGGTLAYPPGPFSGPINPSSSSTSGFKRSL--NRQPNTPFDSSMAL 60

Query: 61  TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTTKGVDP 120
           TV+VLLTALFFMGFFS+YIRRFA++ + + +RRRR+    N  A+S  SR+   +KG+D 
Sbjct: 61  TVIVLLTALFFMGFFSVYIRRFAEDNAVEMSRRRRHP---NPPASSS-SRSPTPSKGLDA 120

Query: 121 AVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWL 180
           + V SLP+++Y   A+E        ++C +CL++FE+K+ +K IPYC HVFH  CIDTWL
Sbjct: 121 STVSSLPLFSYHGDAKET-------LDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWL 180

Query: 181 SNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERG 219
           S+H++CP+CR+ +L         K+   +V  EG + G
Sbjct: 181 SSHVSCPVCRSTQLF------PAKDGRCSVVQEGSDEG 199
[Close]
BLAST of Spo11019.1 vs. NCBI nr
Match: gi|823223406|ref|XP_012444443.1| (PREDICTED: RING-H2 finger protein ATL57 isoform X1 [Gossypium raimondii])

HSP 1 Score: 156.8 bits (395), Expect = 4.800e-35
Identity = 89/184 (48.37%), Postives = 116/184 (63.04%), Query Frame = 1 

		  

Query: 20  FTSPSQHSPT-LSPLKAQEKEN-----PTNYYNNVKLNPPFDSAMALTVLVLLTALFFMG 79
           + SP   S T L PL      N     P++   +   NPPFDSAMALT +VLLT LFFMG
Sbjct: 43  YDSPYSSSTTSLPPLHFSNTTNATSSPPSSSKKSPHYNPPFDSAMALTCVVLLTVLFFMG 102

Query: 80  FFSIYIRRFADEPSFDTARRRRNSSGTNTAAT--SYLSRTRDTTKGVDPAVVESLPVYAY 139
           FFSI+IRRF+++PS   +RRRR   G        S L     + KG+DP  + SLPVY+Y
Sbjct: 103 FFSIFIRRFSEDPSAHLSRRRRYRGGPLDPFPFPSDLHLVSASRKGLDPTTIRSLPVYSY 162

Query: 140 FPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCRT 196
              A+        +++C ICLSEFEE + +K IP+C HVFHVECIDTWL++H++CP+CR 
Sbjct: 163 RGNAKY-------QIDCPICLSEFEESQCLKTIPHCEHVFHVECIDTWLASHVSCPVCRG 219
[Close]
BLAST of Spo11019.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0F8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_008310 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 8.200e-127
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1 

		  

Query: 1   MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL 60
           MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL
Sbjct: 1   MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL 60

Query: 61  TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTTKGVDP 120
           TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTTKGVDP
Sbjct: 61  TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTTKGVDP 120

Query: 121 AVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWL 180
           AVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWL
Sbjct: 121 AVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWL 180

Query: 181 SNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDSSGG 235
           SNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDSSGG
Sbjct: 181 SNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDSSGG 234
[Close]
BLAST of Spo11019.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DZX1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g225350 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 5.800e-64
Identity = 149/243 (61.32%), Postives = 175/243 (72.02%), Query Frame = 1 

		  

Query: 1   MTLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMAL 60
           MT H R+LLPL E+H+PT F++ +   P+    K QE+ENPTNY   +KLNPPFDSAMAL
Sbjct: 1   MTTHIRRLLPLEEDHNPTFFSTKNDPPPS----KIQERENPTNY-TPLKLNPPFDSAMAL 60

Query: 61  TVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNS-SGTNTAATSYL-SRTRD----T 120
           TVLVL+TALFFMGFFSIYIRRFAD+ S D  RRRR+S S   ++ TSYL SR RD    +
Sbjct: 61  TVLVLITALFFMGFFSIYIRRFADDSSVDPTRRRRSSNSAAGSSTTSYLTSRLRDGCSSS 120

Query: 121 TKGVDPAVVESLPVYAYFPGAEEA---KQRMIDEVECAICLSEFEEKEWIKEIPYCGHVF 180
            KGVDP VVESLPV+ YF G  +    K   IDE+ECAICLSEFEE+E +KEIPYCGHVF
Sbjct: 121 PKGVDPTVVESLPVHMYFGGDAKQGNIKNSNIDEMECAICLSEFEERELVKEIPYCGHVF 180

Query: 181 HVECIDTWLSNHMTCPLCRTAKLLTEEEVAAEKEKAVAVAVEGEERGLDAGEVEQGDVDS 235
           HV CIDTW  +H+TCPLCRTA LL +     E+E+ V +A   EERGL   EVE     S
Sbjct: 181 HVGCIDTWFISHVTCPLCRTANLLVKVGGGKEEEQHVEIA---EERGLSVSEVE-----S 230
[Close]
BLAST of Spo11019.1 vs. UniProtKB/TrEMBL
Match: A0A061GV29_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_041565 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.100e-38
Identity = 97/196 (49.49%), Postives = 126/196 (64.29%), Query Frame = 1 

		  

Query: 10  PLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMALTVLVLLTAL 69
           P L +H PT   S S      SPL + +K +        + N PFDS+MALT++VLLTAL
Sbjct: 24  PPLHHHRPTTTNSTS------SPLSSSKKLS--------QQNDPFDSSMALTIVVLLTAL 83

Query: 70  FFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRDTT--KGVDPAVVESLP 129
           FFMGFFSIYIRRF++EP+   +RRRR   G+    +    R   +T  KG+DP  V SLP
Sbjct: 84  FFMGFFSIYIRRFSEEPTAHLSRRRRYRGGSLDTLSLPSDRHHVSTPRKGLDPTTVGSLP 143

Query: 130 VYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCP 189
           VY+Y   A+        +++CAICLSEFEEKE +K IP C HVFHVECIDTWL++H++CP
Sbjct: 144 VYSYHGDAKY-------QIDCAICLSEFEEKECVKTIPCCEHVFHVECIDTWLTSHVSCP 198

Query: 190 LCRTAKLLTEEEVAAE 204
           +CR  +LL  +  A E
Sbjct: 204 VCRGTRLLEIKGGAGE 198
[Close]
BLAST of Spo11019.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TGA5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G089200 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.300e-35
Identity = 89/184 (48.37%), Postives = 116/184 (63.04%), Query Frame = 1 

		  

Query: 20  FTSPSQHSPT-LSPLKAQEKEN-----PTNYYNNVKLNPPFDSAMALTVLVLLTALFFMG 79
           + SP   S T L PL      N     P++   +   NPPFDSAMALT +VLLT LFFMG
Sbjct: 12  YDSPYSSSTTSLPPLHFSNTTNATSSPPSSSKKSPHYNPPFDSAMALTCVVLLTVLFFMG 71

Query: 80  FFSIYIRRFADEPSFDTARRRRNSSGTNTAAT--SYLSRTRDTTKGVDPAVVESLPVYAY 139
           FFSI+IRRF+++PS   +RRRR   G        S L     + KG+DP  + SLPVY+Y
Sbjct: 72  FFSIFIRRFSEDPSAHLSRRRRYRGGPLDPFPFPSDLHLVSASRKGLDPTTIRSLPVYSY 131

Query: 140 FPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCRT 196
              A+        +++C ICLSEFEE + +K IP+C HVFHVECIDTWL++H++CP+CR 
Sbjct: 132 RGNAKY-------QIDCPICLSEFEESQCLKTIPHCEHVFHVECIDTWLASHVSCPVCRG 188
[Close]
BLAST of Spo11019.1 vs. UniProtKB/TrEMBL
Match: B9SCM2_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0475580 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.700e-35
Identity = 92/191 (48.17%), Postives = 120/191 (62.83%), Query Frame = 1 

		  

Query: 51  NPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSR 110
           NPPFDS+MALTVLVLL+ALFFMGFFSIYIRRF+ EP+ +         G  T +    SR
Sbjct: 43  NPPFDSSMALTVLVLLSALFFMGFFSIYIRRFSTEPASEFTSHH---PGPGTPSNQRPSR 102

Query: 111 T-RDTTKGVDPAVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGH 170
               + KG+DP V++SLPVY+Y+ G  EAK     ++ECA+CL EFEEKE +K IPYC H
Sbjct: 103 VVGGSRKGLDPEVIKSLPVYSYYHG--EAKY----QIECAVCLGEFEEKETVKSIPYCKH 162

Query: 171 VFHVECIDTWLSNHMTCPLCRTAKLLTEE-------EVAAEKEKAVAVAVE--GEERGLD 230
           +FH+ECI+TWL  H+TCP+CR  + L  +       +     +K V + V+  G     D
Sbjct: 163 MFHLECIETWLKLHVTCPVCRGTQFLEVKSRDGDGGDGGGGSDKVVRIRVDDGGNSSQQD 222

Query: 231 AGEVEQGDVDS 232
            G    GD D+
Sbjct: 223 QGRSMVGDADT 224
[Close]
BLAST of Spo11019.1 vs. ExPASy Swiss-Prot
Match: ATL57_ARATH (RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.200e-32
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 1 

		  

Query: 2   TLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMALT 61
           T H RKLL L +        + +  + T SPL       P +           DS MALT
Sbjct: 3   TKHLRKLLQLYQACGGEQELTKTVQNVTSSPLTPTPPPQPPS---------ALDSTMALT 62

Query: 62  VLVLLTALFFMGFFSIYIRRFADEPS----FDTARRRRNS--SGTNTAATSYLSRTRDTT 121
           + +LL ALFFMGFFS+Y R FAD  S      +  R R+S  S    + +  +SR     
Sbjct: 63  IFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFR 122

Query: 122 KGVDPAVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVEC 181
           +G+D   V SLPVY Y    + AKQR  D   C ICLS+FEE E +K IP+CGHVFHV+C
Sbjct: 123 RGLDSQAVRSLPVYRY---TKAAKQRNED---CVICLSDFEEGETVKVIPHCGHVFHVDC 182

Query: 182 IDTWLSNHMTCPLCRTAKLLTEEEVAAEK 205
           +DTWLS+++TCPLCR+ +L +++++  ++
Sbjct: 183 VDTWLSSYVTCPLCRSNQLFSDKDLGMQE 196
[Close]
BLAST of Spo11019.1 vs. ExPASy Swiss-Prot
Match: ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.100e-23
Identity = 67/161 (41.61%), Postives = 94/161 (58.39%), Query Frame = 1 

		  

Query: 35  AQEKENPTNY-YNNVKLNPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADEPS--FDTA 94
           +Q +  PTN  YN  +L+P    AMA+ V++L+ ALFFMGFFSIY R  +  P      A
Sbjct: 29  SQSQPGPTNQPYNYGRLSP----AMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPA 88

Query: 95  RRRRNSSGTNTAATSYLSRTRDTTKGVDPAVVESLPVYAYFPGAEEAKQRMID--EVECA 154
              R+ +  N AA           +G+D +VVE+ P + Y     + K + +   E+ECA
Sbjct: 89  GGARSRATVNAAA-----------RGLDVSVVETFPTFLY----SDVKTQKLGKGELECA 148

Query: 155 ICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCR 191
           ICL+EFE+ E ++ +P C HVFH  CID WL  H+TCP+CR
Sbjct: 149 ICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170
[Close]
BLAST of Spo11019.1 vs. ExPASy Swiss-Prot
Match: ATL11_ARATH (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.000e-21
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 1 

		  

Query: 54  FDSAMALTVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRD 113
           FD  MA+ ++VL++  FF+GFFS+YIRR  +       R      G    A ++L+  R 
Sbjct: 59  FDPTMAILMIVLVSVFFFLGFFSVYIRRCLE-------RVMGMDYGNPNDAGNWLATNRQ 118

Query: 114 TTKGVDPAVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHV 173
             +G+D +++E+ P + Y     +  +   + +EC++CL+EFE+ E ++ IP C HVFH 
Sbjct: 119 QARGLDASIIETFPTFQY--STVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHP 178

Query: 174 ECIDTWLSNHMTCPLCR 191
            CID WL +H TCPLCR
Sbjct: 179 GCIDAWLRSHTTCPLCR 186
[Close]
BLAST of Spo11019.1 vs. ExPASy Swiss-Prot
Match: ATL31_ARATH (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 3.900e-21
Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 1 

		  

Query: 30  LSPLKAQEKENPTNYYNNVKLNPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADEPSFD 89
           L  + A +   P   ++    +     AMA+ V+V++ ALFFMGFF++YIR         
Sbjct: 17  LLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVD-- 76

Query: 90  TARRRRNSSGTNTAATSYLSRTRDTT--KGVDPAVVESLPVYAYFPGAEEAKQRMIDE-- 149
                    G+ T A     R  + T  +G+D   +E+ P + Y     E K + I +  
Sbjct: 77  ---------GSVTPAGGARRRVTNATVARGLDAETIETFPTFVY----SEVKTQKIGKGA 136

Query: 150 VECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCRT--------AKLLTE 209
           +ECAICL+EFE+ E ++ +P C HVFH  CI  WL  H+TCP+CRT         +++ E
Sbjct: 137 LECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVE 196

Query: 210 EEVAAEKEKAVAVAV 213
            ++ A+++ AV V V
Sbjct: 197 TDLEAQQQSAVPVPV 196
[Close]
BLAST of Spo11019.1 vs. ExPASy Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 2.100e-19
Identity = 65/184 (35.33%), Postives = 98/184 (53.26%), Query Frame = 1 

		  

Query: 43  NYYNNVKLNPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADEPSFDTARRR-RNSSGT- 102
           N ++  K        M   +++L   +  M F  +Y R +         RRR RN   T 
Sbjct: 16  NNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATM 75

Query: 103 -------NTAATSYLSRTRDTTKGVDPAVVESLPVYAYFPGAEEAKQRMIDEVECAICLS 162
                  +TAATS ++     ++G+DP V++SLPV+ +   ++E  +   D +ECA+CLS
Sbjct: 76  VFFTADPSTAATSVVA-----SRGLDPNVIKSLPVFTF---SDETHK---DPIECAVCLS 135

Query: 163 EFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCRT--AKLLTEEEVAAEKEKAVAVA 216
           EFEE E  + +P C H FHV+CID W  +H TCPLCR+    L   E  AA +E+ V +A
Sbjct: 136 EFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIA 188
[Close]
BLAST of Spo11019.1 vs. TAIR (Arabidopsis)
Match: AT2G27940.1 (RING/U-box superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.200e-33
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 1 

		  

Query: 2   TLHTRKLLPLLENHDPTLFTSPSQHSPTLSPLKAQEKENPTNYYNNVKLNPPFDSAMALT 61
           T H RKLL L +        + +  + T SPL       P +           DS MALT
Sbjct: 3   TKHLRKLLQLYQACGGEQELTKTVQNVTSSPLTPTPPPQPPS---------ALDSTMALT 62

Query: 62  VLVLLTALFFMGFFSIYIRRFADEPS----FDTARRRRNS--SGTNTAATSYLSRTRDTT 121
           + +LL ALFFMGFFS+Y R FAD  S      +  R R+S  S    + +  +SR     
Sbjct: 63  IFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFR 122

Query: 122 KGVDPAVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHVEC 181
           +G+D   V SLPVY Y    + AKQR  D   C ICLS+FEE E +K IP+CGHVFHV+C
Sbjct: 123 RGLDSQAVRSLPVYRY---TKAAKQRNED---CVICLSDFEEGETVKVIPHCGHVFHVDC 182

Query: 182 IDTWLSNHMTCPLCRTAKLLTEEEVAAEK 205
           +DTWLS+++TCPLCR+ +L +++++  ++
Sbjct: 183 VDTWLSSYVTCPLCRSNQLFSDKDLGMQE 196
[Close]
BLAST of Spo11019.1 vs. TAIR (Arabidopsis)
Match: AT3G05200.1 (RING/U-box superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 6.200e-25
Identity = 67/161 (41.61%), Postives = 94/161 (58.39%), Query Frame = 1 

		  

Query: 35  AQEKENPTNY-YNNVKLNPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADEPS--FDTA 94
           +Q +  PTN  YN  +L+P    AMA+ V++L+ ALFFMGFFSIY R  +  P      A
Sbjct: 29  SQSQPGPTNQPYNYGRLSP----AMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPA 88

Query: 95  RRRRNSSGTNTAATSYLSRTRDTTKGVDPAVVESLPVYAYFPGAEEAKQRMID--EVECA 154
              R+ +  N AA           +G+D +VVE+ P + Y     + K + +   E+ECA
Sbjct: 89  GGARSRATVNAAA-----------RGLDVSVVETFPTFLY----SDVKTQKLGKGELECA 148

Query: 155 ICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCR 191
           ICL+EFE+ E ++ +P C HVFH  CID WL  H+TCP+CR
Sbjct: 149 ICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170
[Close]
BLAST of Spo11019.1 vs. TAIR (Arabidopsis)
Match: AT1G72200.1 (RING/U-box superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 5.800e-23
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 1 

		  

Query: 54  FDSAMALTVLVLLTALFFMGFFSIYIRRFADEPSFDTARRRRNSSGTNTAATSYLSRTRD 113
           FD  MA+ ++VL++  FF+GFFS+YIRR  +       R      G    A ++L+  R 
Sbjct: 59  FDPTMAILMIVLVSVFFFLGFFSVYIRRCLE-------RVMGMDYGNPNDAGNWLATNRQ 118

Query: 114 TTKGVDPAVVESLPVYAYFPGAEEAKQRMIDEVECAICLSEFEEKEWIKEIPYCGHVFHV 173
             +G+D +++E+ P + Y     +  +   + +EC++CL+EFE+ E ++ IP C HVFH 
Sbjct: 119 QARGLDASIIETFPTFQY--STVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHP 178

Query: 174 ECIDTWLSNHMTCPLCR 191
            CID WL +H TCPLCR
Sbjct: 179 GCIDAWLRSHTTCPLCR 186
[Close]
BLAST of Spo11019.1 vs. TAIR (Arabidopsis)
Match: AT5G27420.1 (carbon/nitrogen insensitive 1)

HSP 1 Score: 103.2 bits (256), Expect = 2.200e-22
Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 1 

		  

Query: 30  LSPLKAQEKENPTNYYNNVKLNPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADEPSFD 89
           L  + A +   P   ++    +     AMA+ V+V++ ALFFMGFF++YIR         
Sbjct: 17  LLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVD-- 76

Query: 90  TARRRRNSSGTNTAATSYLSRTRDTT--KGVDPAVVESLPVYAYFPGAEEAKQRMIDE-- 149
                    G+ T A     R  + T  +G+D   +E+ P + Y     E K + I +  
Sbjct: 77  ---------GSVTPAGGARRRVTNATVARGLDAETIETFPTFVY----SEVKTQKIGKGA 136

Query: 150 VECAICLSEFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCRT--------AKLLTE 209
           +ECAICL+EFE+ E ++ +P C HVFH  CI  WL  H+TCP+CRT         +++ E
Sbjct: 137 LECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVE 196

Query: 210 EEVAAEKEKAVAVAV 213
            ++ A+++ AV V V
Sbjct: 197 TDLEAQQQSAVPVPV 196
[Close]
BLAST of Spo11019.1 vs. TAIR (Arabidopsis)
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2)

HSP 1 Score: 97.4 bits (241), Expect = 1.200e-20
Identity = 65/184 (35.33%), Postives = 98/184 (53.26%), Query Frame = 1 

		  

Query: 43  NYYNNVKLNPPFDSAMALTVLVLLTALFFMGFFSIYIRRFADEPSFDTARRR-RNSSGT- 102
           N ++  K        M   +++L   +  M F  +Y R +         RRR RN   T 
Sbjct: 16  NNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATM 75

Query: 103 -------NTAATSYLSRTRDTTKGVDPAVVESLPVYAYFPGAEEAKQRMIDEVECAICLS 162
                  +TAATS ++     ++G+DP V++SLPV+ +   ++E  +   D +ECA+CLS
Sbjct: 76  VFFTADPSTAATSVVA-----SRGLDPNVIKSLPVFTF---SDETHK---DPIECAVCLS 135

Query: 163 EFEEKEWIKEIPYCGHVFHVECIDTWLSNHMTCPLCRT--AKLLTEEEVAAEKEKAVAVA 216
           EFEE E  + +P C H FHV+CID W  +H TCPLCR+    L   E  AA +E+ V +A
Sbjct: 136 EFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIA 188
The following BLAST results are available for this feature:
BLAST of Spo11019.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902238593|gb|KNA25240.1|1.2e-126100.hypothetical protein SOVF_0083... [more]
gi|731371307|ref|XP_010666002.1|8.3e-6461.3PREDICTED: RING-H2 finger prot... [more]
gi|590587726|ref|XP_007016041.1|1.0e-3749.4RING/U-box superfamily protein... [more]
gi|225436426|ref|XP_002273630.1|3.6e-3543.5PREDICTED: RING-H2 finger prot... [more]
gi|823223406|ref|XP_012444443.1|4.8e-3548.3PREDICTED: RING-H2 finger prot... [more]
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BLAST of Spo11019.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S0F8_SPIOL8.2e-127100.Uncharacterized protein OS=Spi... [more]
A0A0J8DZX1_BETVU5.8e-6461.3Uncharacterized protein OS=Bet... [more]
A0A061GV29_THECC7.1e-3849.4RING/U-box superfamily protein... [more]
A0A0D2TGA5_GOSRA3.3e-3548.3Uncharacterized protein OS=Gos... [more]
B9SCM2_RICCO5.7e-3548.1Zinc finger protein, putative ... [more]
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BLAST of Spo11019.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ATL57_ARATH2.2e-3241.6RING-H2 finger protein ATL57 O... [more]
ATL6_ARATH1.1e-2341.6E3 ubiquitin-protein ligase AT... [more]
ATL11_ARATH1.0e-2138.6RING-H2 finger protein ATL11 O... [more]
ATL31_ARATH3.9e-2133.3E3 ubiquitin-protein ligase AT... [more]
ATL2_ARATH2.1e-1935.3RING-H2 finger protein ATL2 OS... [more]
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BLAST of Spo11019.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G27940.11.2e-3341.6RING/U-box superfamily protein[more]
AT3G05200.16.2e-2541.6RING/U-box superfamily protein[more]
AT1G72200.15.8e-2338.6RING/U-box superfamily protein[more]
AT5G27420.12.2e-2233.3carbon/nitrogen insensitive 1[more]
AT3G16720.11.2e-2035.3TOXICOS EN LEVADURA 2[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 147..190
score: 5.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 148..189
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 148..190
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 145..191
score: 5.9
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 55..216
score: 4.4
NoneNo IPR availablePANTHERPTHR14155:SF102RING ZINC FINGER-CONTAINING PROTEINcoord: 55..216
score: 4.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 140..193
score: 7.57

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
biological_process GO:0006396 RNA processing
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006012 galactose metabolic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006002 fructose 6-phosphate metabolic process
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0008152 metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006417 regulation of translation
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:1901918 negative regulation of exoribonuclease activity
biological_process GO:0010207 photosystem II assembly
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005622 intracellular
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
cellular_component GO:0005945 6-phosphofructokinase complex
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003872 6-phosphofructokinase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0043531 ADP binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0016887 ATPase activity
RNA-Seq Expression