Spo11056 (gene)

Overview
NameSpo11056
Typegene
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L18a-1
LocationSpoScf_02870 : 9918 .. 19152 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAAACTCATTTCAAGACTTGGTGTAGTCTTTTACCACATTATCCCGAGATTTAGACTTAAGACTCACCTCGAGACTCTCTTCGAGAATTGGGATAAACTCACCCTAAGTAGTTGTACTAATTTTGTATGAATTTCGTAGAAATTGCTGGCGAACTGACGGCTAATTTGTCCCTACAGAGCTGTCTCTAGCGATCACCGTGTAATTCGTACAATCGATCATCAAGAAGAGAGGATGACTGAGAAAGAAAGAAAAGGGACGACCAGCACCTCCAGTGCGACCGCCTCGCCGGATCCTACGGCGCCGTTTGTTCAACCGTCGCAACAACAGTATTATGGGACGTTTCAAGGGGTTGCGTGTTACACCCAGCCACCGCCTCAACCAGCTGTCGGTTTCCCCCACCCTGCTCCCCCACCTGGCGCCGCCGTCCCTTCTGCTTATTTTACTCGGGGTTATCAAACTGTTCCTGGTATTTTCTCTACTTTTCTTCAATCTTAATTTTGTTATAATTTCGTCATTTAGTTTGTTTTTATATCATCTAGGGCAATTCTGGTTACTGTTATATGTGATTATTGAATTGGGTTTCTTCTTTGTGCTTTTGAATCGCTAAATTGCTGTAATTGTGTTGTATTTGGCTAATTTTCTGGTATAACTGTATGAGGGGACGGATTAGTAAGTTTTATTGTGTGAGGTTAAGGATGAATTTAGAGCACTTTTGTGTTCTTTTATGTTTTTTTGTTTGCACCATTTTGGGTTGGGCACAAAACCGTCTGCTAATACACAACCAATTAATGGTTGGATAAAAAAATCTTTCCGGCAAAAAAGGTGGGGAAGAAGCTAGCCGAACCCGGATAAGAAATTCTCGGCGTCAAGAGATCGTAAGTAACTCAGTGAATGCTCTCCAAGAAGGGCTTAAATATCAATTGCCCATATGATAACAAACAAAAGAGAAGGAAAAGGTTAGTTAGGTAACAATGCGAAAGTTTAAAGTGAACACTCCAAAAAGTACTTGAAAACATACCATAGAAGGACAATGAAAGTAAAAAAACCGGAGGATGTATAGGATAATGTTATTTGAATTGGCAACTTTGTACCTAAATTCCTAAATTGGATAGAGCTGTACAGCTGGTAGTATTCATGTGAGATTGATGGGATTGAGGATTGGCTTCATAGTGTACAATTTTGATTATTTAGTGCTAATTATGCATCCTTATAAATTTCGAGATTGGGCATGGATTTGAGCGGGGTGAAGGTGTGTTTGTTTGGAATAAGGAACTGAGGTGATAAGGTTGACTTTTTGAAGAATGTTTTGATATTGTGATCAAGGTTTTCAGGATCGGGATTCTACTTTGGATCGATGAAGGGGGTAGGATCGGATCGGTAGAATCGGATCGTAGGATCGTAAGATCCTACTAAATAGTAAAAATAATGGTTATATTATTAAAATGAAAGGTACAATCATGTATTCATGTAATCTTAATACTTAAATATCATTTTTTTCTCACATAAGATTAATACATGTGTAGATTCAAGAGCAATTAATAAGATATGCGCAAGGTTTTTGAAATTATATGAAATTATGTACTTTTAAGTGAATACGATACTTTTTCTATAACTAATTTATTCATTGAAAAGTATGATATTTCTAATGATGTGTGATTATGAACTATTTAGTAATAAAAAAAATTGTTATCTTGACGTATTGTATGTTGGATCGGATCGTAGAATCGTAGGATCGTATTAAGATCCCACCACTAATTTTTTTTACCGAGATAGGATCGTAAGATCCTACACACATTAAGATCCTACCTAAGTTCCGGTTGGTGGCGTGTTTTTGGATCGTAGAATCATAGGATCGTAAGATCCGAATCGGGAGTTTAACAACCATGATTGTGATTCATCTTCTATACGAAGTATAGGAGGTAGGAGAATGTTTTTAATATCTTTATTTGTGTGGAAATTGAACCTAATTTTGGTGGTTTAGGTGGATGTTTCATTTTGCAATATATGGATTATACCCTTACTCACCTCCTTTAAATAAGCAGGCCGAGCGCTGTTTTGGTGTGGGAGCTACAGGCCTACAGTTACCTTAGTGGAAATTGCTCCATATAAACAATAAAATACTAATAGAATGTGTCTATGTTACTCACACTCGAGGGATTAGGAGCTGGTATGGAACTATGGATGTGAATACTTGGAAACAAGTCCAGTACACTTATGGTAGTGTTTGAACTTTGAATTTGAAGCATAATCAAAATATCTGGGATTCAAGTCTTCAGTGCTTTAAGTGAGTTCCGGCTTCTTGTTCTAACAAAGTAGTTTGGTTTCTTGTTCTTAAGTCCTTGCATACGAGGCTCATTTGATTTCCTTCACTGGTTTGTTTAGACAATCAATAATCTATATTGTAGAGTGGATAACCTTCATTTTGGAGGAGGAAAGGGATGGGGGACTCAAAGAGTCCCCTAAAAAAGAGAATCAAAGAGAAGGAAGATTTAGGAAAATTGGAAATAGCGGAGATGAAATTTAAAGGATAAAGACCAATACAAGTAAATTATGATATGTTTTACTCATGTGTCTAATGTTGAATAGAGTGAGTAAATGTCGTTTAGGTAGCTAGTATAACATTGCAAATTAAAACAGCAACCAGTTCTGAGTCACACGTGTTATACAAAAAACAATTACACTCCTTTTCTTTCTTTTCTTCATTTATGGTTTAAGTTAATTTGAATCCATATGTTTCTTTCTCATTTCCATATTTCTTCCTCCAAGTACCCCTAACTACCACAATCGTTATTAATCTTCCTCATCTATCCACCACCATCATTGATTTCCCTTGTCTATCCACCACCGCCATCATCCCTCAACCTTCAAGAATGTTAGACACTTAGACCATAGCTTCCATTGCTTGAACTTGGTCACCACAGCAAACCTAGGTAGCCAACATCACCATATTCCTCTACGTCTGTGGTCTATCTTTAATCCTTTTTGAAAATGATTGAGTACTACTACCTCCTTTTCACAATACATACTACATTTCTATTCTCACGTACTCCAACATGCTTCTTTAGACATTAATATCTCTAATTGCGTATAAGTAAAAATTATGAAAGGATAATATTTGGAATCCTCGCATTGATACGAATTTAACAAGTTCTCACTTGACTATGTTTTTTCTTAAATAATGGTGAAAAAAATATTGTCAAAGTTGGTTGATAAATAGAGTCCAAATGAGAAACAATGCAAGTATTGTGAAAAGGAGGTAGTATTTGGTAGAATTCTTCTTATTTACGAATTCGGAATCAGCAAGTTATTACCCAAATTTGTGAAGTAAAGCAAGATAATAAATATACAAGGAACACCAAGTCAAAGAGGAGAAAGTGAAAAATAGTAAATTTGAGTAGAGGGGAGAGGAGACTAGTTACTAGTTGTAATAGTAGCATGAAGTGGCCAAGTGGGCATTAGTATTGTGGAGACTCGCCTACCATAAATACTCTTGAGAACACGGTGAGATGTTTGTTGTTGTAAAGAGGAGTAACCTACCAGTCTCAATATGGTATCACCCTTTTTTCCAGTCTTAATGCTGCTTTAAAATTACTAGGTATCTCCTATTTATGCCACGCTGCATATAAGTGTGTGTGTGAGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGGGGTGAGGTTCCGGTGAGAACCCTCTTATAGTGAGAACTTCTCTTATCGTGAGAACCTTTGTACGCATATTTCGAACTATATGTGCGTATCTTTTAAACTCTATGTGCATACTTTTAAAACTCTATGTACATATTTTTTTAAGCTAAATTTGCACCCATCTTTATAATTGTCTCTAAGATGCAACATTTGAGCAAATAATATGCACATATAGTTCAGAAAATATGCGTATTTAGTTCAAAAAATATGCATATTCAGTGCAAAAAATATGCACGTAAAAACTGTTAAGAGTGGTGGGTTTTTTGCATTGCAATTAAGAATTACAAGTTCCACAAAATCAGACTTCATCTTCATGAAGAAGCTTTTGTTGAATTGAGAATTCATATATTAAATGCGTAGTCAATGACTCGATGTTGATAGAATACTTTCAGAACAATTAATAGAGAATACAATCTGGAATTTCAAATGGTAGATTCAAATTTACTTCTATAGCGTCTAAATTTAATGTATTTAGGAGTTCGAATGATATAACATCAATGGCGTCTAGTAAATTGGGTTGGAGGAAGAGGATAAAGGAAAGGTTCCTAATTTATTATGCTTTATAAACACACGTGAGTTTGGATAAAAAGAATTTAACGGTCAAGATATCAATAATGAACGGTTAAGATGAGAGTTCTCACCCTAAGGTGGTTCTCATGTGAACTTAAATCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATCATCATCATTATTCATTATCATTACCCCATTGCCTCAAAGAGCCTCCCGCAAGAAGCGGGGTAAGGGGGGGTCGGATGTACGCAACCTTACCCCTGCAATTGCAGATAGGTTGTTTCCAATTGACCCAAAAGCGATAACGGGACAACAACGGGACGACCATCTTCTACTTCATGGAAAGGAAGCGAAGAGGTTTTAAGAGCCATTTTGATTTAGTCCAAATATATATATATATATATATATATATATATATATNATATATATATATATATATATATATATATATATATATATATATATCATTTTAAGAGTTTATGTTGTTTGCTATTGTCTACTACTCTACTAGTATGTTTCAACTCCATAAGTTCATAGCTCTGAAACAAAGTCAACCCAGGTTTGTCTTGCATCTCTTATCTCATTTTCTCCTTAGGTGATTATCAGATCCTATAATTCCTTTCTTCACGTGTAAACCATTCTGAAAGTAACTTAAACTCTATTTAAACATGCGGCAACAACTGGTAAATTGTTTTGTAAGAGTAATGAACAAACCACTTGTTCTTGTGGTGCCAAGTCTGAGAGATTTTTCCTGTACTATTGACAAAGTAAAAACCGTATTAACTTGAATAGGAATTTGGGCACTGTAATTCGAGTGAAAAGTCTCCATGTAAGGTGGCTTCAGTATCCTGTAGTGCAGTGATTGCTGTGTGTTTAACAGAGGACAATAACAATCTCCAATGGCCAAACTGGGCCACTCTACTTGAAAGTTGGCTTTATAATCATACTTTGTAAGTGAAAGATATGTAGTATGGTTATCCTGCTTATCCATGAAAATGACAGTGGTAAAAGCCCTTGAATAATTTGTTTTTTCAAAGTCTTACCGACTGAGCTTGTGTTTATGACCTTCATAGCAGTGACTAGAATAAGAAAGATATATTCTGCATAGATTTCTTCTTCAAGCTTTAAGATCATAAGTGAGAGAGTCTCTTATGTCAAACGCTACTCATGCAAACAGAAACGGAGATGCCAACACCTCGGAATAGCCGTTCGCGGAAAAGTCCTCTCTCTGTCATATCGCATCTCTTCCGGGAAAGACTATCGATACTAACATCACTTCTTATTCTTTTTAAATAGTTTCAACGGAAACTTCCATATTTCGAGAAGAAATGGTGCATTTCAGTAATTATTTGCACGTCTCCGCATGCTGTATGACAATAATACTTTTCTAGCGAACTTTGATTTCCGAAAATTTATATCCAACTCCTATGAAACATTCTTGATAATATCGAAGAAAATATTAAATCTATGGCCCTAGTACTCCCTCCGTCCTTTTTACTTGCCCCCTTAGCCATTTGCACATGATTTCAGAAGAATGAAAAAGTAGAGAGAAAAAAATGTGATGTGTATGAGTGGTGGAACCCAATTCGAGAACATGACAACATGTACAGACGGAAAATTTACCAAAAGAAAATGGGGCGTGTAAATTGGAAATTTGGAATATCCCGAAAAAGCAAAAAGTGGCGGAGGTAGTAATATTAATGGAGCTTTCGAGACGTGTATTGGAAGAGAAGGAACCAATATGGCAGGTCAGCTAGTATGGCTGTAACTTGAATATTGTAGGTGGAAAGAAATGACCACCGTGTGAAGCAGGTCTTCTAGTTTGGAGTCTTTTTTTAGTTAGAATTGTGTCTGTTGCTTCTCTAGATCTTTTTCCATTTCCCGTGTTTCAAGTTTTGGTTTGAGTGATATTAAATTTTATTCTCAATTTATCATTCAATATTTTCCCTTTAGATCATTAAGAGGTTCAGTTGTTGTTCTTTTTATTTTTTACCTATATTTTTTCTTTTATTAATGAAAAAGACTTGTATCGTGAAGAAATTATCTCTGAAACTTAATTTGATGTCTGAATATAGTTTTTCAATTCAAATTGATTGCTATAGGTGGTTTTTCATCCATACTGAATTTGTTATGATTAAAGTTTGAAGTGTGAAGGGTGTAAAAGAAAGAAGAACCCCTAATGGAAAATTCCCAATTTGCTCCTTCAAAACTCTTAAATTCTCTCCTGTATATTGCGGCTGCTACCTTTGTGTTTCTGCCACAGTCGCTGTCCTCATCTACGCTATCCACCGCCTATTTTGCTGGCAAACTTCCAATAGGGAGCAACCAAATATTCCCTCAAAGGCTTATTAGATTACCTAATGAAGTTTGACCCGAATCAAATCCATCTCGTGCTATCCTGAATGAAGCTTTACTGGATCACTAAAAAACTAAGTCATGCTGGATTGCTGAACACTTAAAACAGTAGCATGAACAATGTTTAAGTTGAAAGCAGAGTTTTCTATATGGAAAAGCCGAAAAGGTGTTCAGTACAATTTCAAATCATTGATATGCCAAGAGTTCTTATTTCATAGTGTTTGAGTTGTATGCTTATTGACCCACGTTTTTGTGCTTAGGTTATGCCATTGCTGAAGGAAGACCTTTCAGGGAGCCAAGACTTCCTTGCTGTGGAATTGGGGTTGGCTGGCTCTTGTAAGTTCACTGTCGTACTTTTGCCTTATTTTTTGTTGTTTTAATTGTAGCTAGCTTCTTGGTTCATAAGGCAACTGGTTTCAGTATAGATTCGAGCGTTCGACTTTACAACAATGTTACTGGTGTTTACTTAGAGCACCTTTCTGGGGATTGATTGAGAATATGAACATTGAATTGTTGATTGTTTGTAGCTTTGGATCCTTGTTCTAATACGGAACATAACTCATGCATGTGGTCCCCTTAACTCCTTAAGGACTTAATGTTGTTTTCCTTGTTTATGATGTGCACCCTCTGATCCAAAAATGTTATCTGTTTAGCTATCTCACACGTGTGAGTTTTTGGTTAATTATTGTTGAAATTGCATTGGTATTATTAAGTGGCATAAAATTTGATTTCCTTTTATTTGAAATGAATGCAACGTTATGTTGGTATAAGTGTCATGCCTAGCAGTTGGAGCGAAGGTATCTCCATAAGCAATTTTCAGATTGTTGATAGTAGCCTTTCATGACTAGTCTGGCCTTGTATTTGCTGGAAACAGTTTGGGTTCAATTCTCTTTTGAAATTCTGAATGTCTTTTGCGACAAAAATCTTCAACATATTGGTATTTAACAATTCATCTCATGAAATTTGTGAACTTGTATGAATAAGTTGAACAAGGCAAAATTTTGCTGATCTTTTTGTGCTACTTATTGTGTTTGATAGCAATGTGAAAGTTACAGTTCATAAAGTTTGGCCGGGATTAAGTAATGGTTTATCAAGAAAAACTAGACAAATTGTAGACTGGCATTTGCAAATCAGCATTTGTTTCTAGTTTGGCCTAAAATTGATAATAGATGGTTGAACAATTCAGATATCATGTGAGAGAATTCGGTTTTAACATTTCTATTTATATATCTAAGATATCTATCTATGTTAATGTGTATGCATGGGAGAATTGGAGAAAGGAAATGAATAACTGGACGTCTTGTATCTACATTTGAGATAATATATTTTTGGAGATAAATATGCCAGCTCACATTCTTGCTACGACAATATATTTTTTGCAAGATAGAAAAACCCTTTGCATAAGGAGGCTTTTCTTAATGTCCTGCCCTTGTTGTTTATAGATTCTAGTTCTACCTCTCGCTTGTTCTATAATTAACCCCTTTCCTCTTTTTTTTCAAGGTTTATTGTTGGTTTTTTCTTCGCGGCCATACCTTGGTATGTTGGAGCATTGATTCTACTTTGTGGCAGAGTGGATTACAGAGAGAAGCCAGGGCTTGTTGCATGCATGGTGGCTGTAAGTCTTTTAATTTTCTTCTTTTAACTTCACATCTCAAGATTATGACTAATAAGTTATCCTGCCATGACGAACTGATCGGGTTATTTTCCGTTCTACTGGATTTTTTTCTGATTCTTTTAAAAATAAATCCCCCGTACCTAGGAAAGAAGAGGAGGAAAATAAATTATATCTAGTGTTATTTATTTAAAATCATGTTAAACGTGTTGTAGATTTTATCATGATAATATGACCTGGATGTTCATGTGAATTGAGAATAGAATTTGGTGATGATTGTTAACGTATTTTTCCCTCTATTTTCTCTCTTCGGATGTAGTCTATTCTGGCTGTGATTGCTATTGTATTCGGAGCAACAAATGGTTATGATGATATCTGGTGATACCTGAAGTTAAACACAAAGGAATTAAGATGTACAACTTACATGAAGCAACAGACACCCTCCTCGTTTTCTTGTTTAAATTTACTGAAGTCCTCAACTGAATTCGTTTGTTATGTACTGTATTATGTTTGTAAATTCTTATAAATGTCAATCTTTGTTCACGGTATAATTTTTTTTACAAAGTATGAACCTCGATATGGTATGATGTTTTGGCATAGGGCTTTGGAATTGCCTGCCAATGACAAAAATAAATTGTACAGTTTTGCATCTCATTTTTGGTTGAAAGTATAAAGGCTGTTTACAAATTTATCCTGTAAAGTGTTCTGTTGAGTTTAGAGGTGGTAGTGGGGCTGTGCCGTCCCAGCTTGCGAAGCCAAAACTCAACTTAGACAAGAATCATTTTAATTCAATCTAATTACTATGGACTATGGAGCATATTGATCATCCTAATTCTGAATCCATTCTTCATTTAAAATGACTAGGGATTGCAGATCTTGTAACCTCATATGTTGGATTGATGGTATAAACTCCTAAACCAACACACTTAAAGTTAACCACAAAATTAC

mRNA sequence

TTCAAACTCATTTCAAGACTTGGTGTAGTCTTTTACCACATTATCCCGAGATTTAGACTTAAGACTCACCTCGAGACTCTCTTCGAGAATTGGGATAAACTCACCCTAAGTAGTTGTACTAATTTTGTATGAATTTCGTAGAAATTGCTGGCGAACTGACGGCTAATTTGTCCCTACAGAGCTGTCTCTAGCGATCACCGTGTAATTCGTACAATCGATCATCAAGAAGAGAGGATGACTGAGAAAGAAAGAAAAGGGACGACCAGCACCTCCAGTGCGACCGCCTCGCCGGATCCTACGGCGCCGTTTGTTCAACCGTCGCAACAACAGTATTATGGGACGTTTCAAGGGGTTGCGTGTTACACCCAGCCACCGCCTCAACCAGCTGTCGGTTTCCCCCACCCTGCTCCCCCACCTGGCGCCGCCGTCCCTTCTGCTTATTTTACTCGGGGTTATCAAACTGTTCCTGGTTATGCCATTGCTGAAGGAAGACCTTTCAGGGAGCCAAGACTTCCTTGCTGTGGAATTGGGGTTGGCTGGCTCTTGTTTATTGTTGGTTTTTTCTTCGCGGCCATACCTTGGTATGTTGGAGCATTGATTCTACTTTGTGGCAGAGTGGATTACAGAGAGAAGCCAGGGCTTGTTGCATGCATGGTGGCTTCTATTCTGGCTGTGATTGCTATTGTATTCGGAGCAACAAATGGTTATGATGATATCTGGTGATACCTGAAGTTAAACACAAAGGAATTAAGATGTACAACTTACATGAAGCAACAGACACCCTCCTCGTTTTCTTGTTTAAATTTACTGAAGTCCTCAACTGAATTCGTTTGTTATGTACTGTATTATGTTTGTAAATTCTTATAAATGTCAATCTTTGTTCACGGTATAATTTTTTTTACAAAGTATGAACCTCGATATGGTATGATGTTTTGGCATAGGGCTTTGGAATTGCCTGCCAATGACAAAAATAAATTGTACAGTTTTGCATCTCATTTTTGGTTGAAAGTATAAAGGCTGTTTACAAATTTATCCTGTAAAGTGTTCTGTTGAGTTTAGAGGTGGTAGTGGGGCTGTGCCGTCCCAGCTTGCGAAGCCAAAACTCAACTTAGACAAGAATCATTTTAATTCAATCTAATTACTATGGACTATGGAGCATATTGATCATCCTAATTCTGAATCCATTCTTCATTTAAAATGACTAGGGATTGCAGATCTTGTAACCTCATATGTTGGATTGATGGTATAAACTCCTAAACCAACACACTTAAAGTTAACCACAAAATTAC

Coding sequence (CDS)

ATGACTGAGAAAGAAAGAAAAGGGACGACCAGCACCTCCAGTGCGACCGCCTCGCCGGATCCTACGGCGCCGTTTGTTCAACCGTCGCAACAACAGTATTATGGGACGTTTCAAGGGGTTGCGTGTTACACCCAGCCACCGCCTCAACCAGCTGTCGGTTTCCCCCACCCTGCTCCCCCACCTGGCGCCGCCGTCCCTTCTGCTTATTTTACTCGGGGTTATCAAACTGTTCCTGGTTATGCCATTGCTGAAGGAAGACCTTTCAGGGAGCCAAGACTTCCTTGCTGTGGAATTGGGGTTGGCTGGCTCTTGTTTATTGTTGGTTTTTTCTTCGCGGCCATACCTTGGTATGTTGGAGCATTGATTCTACTTTGTGGCAGAGTGGATTACAGAGAGAAGCCAGGGCTTGTTGCATGCATGGTGGCTTCTATTCTGGCTGTGATTGCTATTGTATTCGGAGCAACAAATGGTTATGATGATATCTGGTGA

Protein sequence

MTEKERKGTTSTSSATASPDPTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFPHPAPPPGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11056.1Spo11056.1mRNA


Homology
[Close]
BLAST of Spo11056.1 vs. NCBI nr
Match: gi|902207268|gb|KNA15662.1| (hypothetical protein SOVF_096150, partial [Spinacia oleracea])

HSP 1 Score: 333.6 bits (854), Expect = 2.000e-88
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1 

		  

Query: 1   MTEKERKGTTSTSSATASPDPTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFPHPAPP 60
           MTEKERKGTTSTSSATASPDPTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFPHPAPP
Sbjct: 19  MTEKERKGTTSTSSATASPDPTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFPHPAPP 78

Query: 61  PGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGA 120
           PGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGA
Sbjct: 79  PGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGA 138

Query: 121 LILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW 163
           LILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW
Sbjct: 139 LILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW 180
[Close]
BLAST of Spo11056.1 vs. NCBI nr
Match: gi|731372517|ref|XP_010666371.1| (PREDICTED: 60S ribosomal protein L18a-like protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 230.7 bits (587), Expect = 1.800e-57
Identity = 117/164 (71.34%), Postives = 130/164 (79.27%), Query Frame = 1 

		  

Query: 1   MTEKERKGTTSTSSATASPDPTAPFVQPSQQQ--YYGTFQGVACYTQPPPQPAVGFPHPA 60
           MTEKER GTTSTS A+A P PTA F Q  QQQ   YGTFQGVA YT+PP QP VGFP PA
Sbjct: 1   MTEKERNGTTSTSGASAPPYPTASFGQQQQQQPYEYGTFQGVAYYTRPPTQPVVGFPQPA 60

Query: 61  PPPGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYV 120
           PPPGA V S Y+  GY TVPGYAIAEGRP REP   CCGIG+GW+LFI GFF A IPWYV
Sbjct: 61  PPPGATVASNYYAHGYHTVPGYAIAEGRPLREPSTLCCGIGIGWVLFIAGFFLAGIPWYV 120

Query: 121 GALILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW 163
           GALIL+CGR+DYREK G VACMVA+ILA++AI+FG T+  +D W
Sbjct: 121 GALILVCGRLDYREKAGYVACMVATILAMLAILFGLTSD-NDFW 163
[Close]
BLAST of Spo11056.1 vs. NCBI nr
Match: gi|703085474|ref|XP_010092747.1| (60S ribosomal protein L18a-1 [Morus notabilis])

HSP 1 Score: 199.1 bits (505), Expect = 5.800e-48
Identity = 97/141 (68.79%), Postives = 106/141 (75.18%), Query Frame = 1 

		  

Query: 27  QPSQQQYYGTFQGVACYTQPPP---QPAVGFPHPAPPPGAAVPSA----YFTRGYQTVPG 86
           Q   Q  YGTFQGVA Y  P P   QPA+GFP P PPPG A PSA    Y+ RGYQTVPG
Sbjct: 19  QEHNQPQYGTFQGVANYPPPRPPHHQPAIGFPQPVPPPGVAEPSAHHPDYYARGYQTVPG 78

Query: 87  YAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPGLVAC 146
           YA+AEGRP RE RLPCCGIG+GW LFI+GFF A +PWY GALILLC R+DYREKPG +AC
Sbjct: 79  YAVAEGRPVRERRLPCCGIGIGWFLFIIGFFLAGVPWYAGALILLCSRIDYREKPGYIAC 138

Query: 147 MVASILAVIAIVFGATNGYDD 161
            VA+ILA IAIV G T G DD
Sbjct: 139 TVAAILATIAIVLGVTKGADD 159
[Close]
BLAST of Spo11056.1 vs. NCBI nr
Match: gi|1009162393|ref|XP_015899412.1| (PREDICTED: 60S ribosomal protein L18a-like protein [Ziziphus jujuba])

HSP 1 Score: 190.3 bits (482), Expect = 2.700e-45
Identity = 91/145 (62.76%), Postives = 104/145 (71.72%), Query Frame = 1 

		  

Query: 27  QPSQQQYYGTFQGVACYT-----QPPPQPAVGFPHPAPPPGAAVPSA------YFTRGYQ 86
           QP     YGTFQGVA Y      +PP QPA+GFP P PPPGA           Y+  GYQ
Sbjct: 26  QPQPPPQYGTFQGVANYPPPLPPRPPQQPAIGFPRPVPPPGATASGGPPPDPQYYAHGYQ 85

Query: 87  TVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPG 146
           TVPGYA+AEGRP RE RLPCCG+G GW LFI+GFF AAIPWY+GA+ILLC RVD+REKPG
Sbjct: 86  TVPGYAVAEGRPVRERRLPCCGLGFGWFLFIIGFFLAAIPWYIGAIILLCARVDHREKPG 145

Query: 147 LVACMVASILAVIAIVFGATNGYDD 161
            + C+VA+ILA +AIVFG   G DD
Sbjct: 146 YIGCVVAAILATVAIVFGVVKGVDD 170
[Close]
BLAST of Spo11056.1 vs. NCBI nr
Match: gi|225462958|ref|XP_002268796.1| (PREDICTED: 60S ribosomal protein L18a-like protein [Vitis vinifera])

HSP 1 Score: 189.5 bits (480), Expect = 4.600e-45
Identity = 90/133 (67.67%), Postives = 102/133 (76.69%), Query Frame = 1 

		  

Query: 32  QYYGTFQGVACYTQPPPQPAVGFPHPAPPPGAAVPSA-------YFTRGYQTVPGYAIAE 91
           Q+YGTFQGV  Y+QPP   AVGFP P PPPGAA PSA       Y+  GYQ VPGYA+AE
Sbjct: 11  QHYGTFQGVPTYSQPP---AVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAE 70

Query: 92  GRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPGLVACMVASI 151
           G P RE RLPCCGIG+GW LFI+GFF AA+PWYVG  +LLC RVDYREKPG +AC +A+I
Sbjct: 71  GTPVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGYIACTIAAI 130

Query: 152 LAVIAIVFGATNG 158
           LA IAI+FG T G
Sbjct: 131 LATIAIIFGVTKG 140
[Close]
BLAST of Spo11056.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RA86_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_096150 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.400e-88
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1 

		  

Query: 1   MTEKERKGTTSTSSATASPDPTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFPHPAPP 60
           MTEKERKGTTSTSSATASPDPTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFPHPAPP
Sbjct: 19  MTEKERKGTTSTSSATASPDPTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFPHPAPP 78

Query: 61  PGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGA 120
           PGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGA
Sbjct: 79  PGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGA 138

Query: 121 LILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW 163
           LILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW
Sbjct: 139 LILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW 180
[Close]
BLAST of Spo11056.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B597_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_001610 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.300e-57
Identity = 117/164 (71.34%), Postives = 130/164 (79.27%), Query Frame = 1 

		  

Query: 1   MTEKERKGTTSTSSATASPDPTAPFVQPSQQQ--YYGTFQGVACYTQPPPQPAVGFPHPA 60
           MTEKER GTTSTS A+A P PTA F Q  QQQ   YGTFQGVA YT+PP QP VGFP PA
Sbjct: 1   MTEKERNGTTSTSGASAPPYPTASFGQQQQQQPYEYGTFQGVAYYTRPPTQPVVGFPQPA 60

Query: 61  PPPGAAVPSAYFTRGYQTVPGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYV 120
           PPPGA V S Y+  GY TVPGYAIAEGRP REP   CCGIG+GW+LFI GFF A IPWYV
Sbjct: 61  PPPGATVASNYYAHGYHTVPGYAIAEGRPLREPSTLCCGIGIGWVLFIAGFFLAGIPWYV 120

Query: 121 GALILLCGRVDYREKPGLVACMVASILAVIAIVFGATNGYDDIW 163
           GALIL+CGR+DYREK G VACMVA+ILA++AI+FG T+  +D W
Sbjct: 121 GALILVCGRLDYREKAGYVACMVATILAMLAILFGLTSD-NDFW 163
[Close]
BLAST of Spo11056.1 vs. UniProtKB/TrEMBL
Match: W9QZI1_9ROSA (60S ribosomal protein L18a-1 OS=Morus notabilis GN=L484_024642 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.000e-48
Identity = 97/141 (68.79%), Postives = 106/141 (75.18%), Query Frame = 1 

		  

Query: 27  QPSQQQYYGTFQGVACYTQPPP---QPAVGFPHPAPPPGAAVPSA----YFTRGYQTVPG 86
           Q   Q  YGTFQGVA Y  P P   QPA+GFP P PPPG A PSA    Y+ RGYQTVPG
Sbjct: 19  QEHNQPQYGTFQGVANYPPPRPPHHQPAIGFPQPVPPPGVAEPSAHHPDYYARGYQTVPG 78

Query: 87  YAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPGLVAC 146
           YA+AEGRP RE RLPCCGIG+GW LFI+GFF A +PWY GALILLC R+DYREKPG +AC
Sbjct: 79  YAVAEGRPVRERRLPCCGIGIGWFLFIIGFFLAGVPWYAGALILLCSRIDYREKPGYIAC 138

Query: 147 MVASILAVIAIVFGATNGYDD 161
            VA+ILA IAIV G T G DD
Sbjct: 139 TVAAILATIAIVLGVTKGADD 159
[Close]
BLAST of Spo11056.1 vs. UniProtKB/TrEMBL
Match: D7SX30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0135g00070 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.200e-45
Identity = 90/133 (67.67%), Postives = 102/133 (76.69%), Query Frame = 1 

		  

Query: 32  QYYGTFQGVACYTQPPPQPAVGFPHPAPPPGAAVPSA-------YFTRGYQTVPGYAIAE 91
           Q+YGTFQGV  Y+QPP   AVGFP P PPPGAA PSA       Y+  GYQ VPGYA+AE
Sbjct: 11  QHYGTFQGVPTYSQPP---AVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAE 70

Query: 92  GRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPGLVACMVASI 151
           G P RE RLPCCGIG+GW LFI+GFF AA+PWYVG  +LLC RVDYREKPG +AC +A+I
Sbjct: 71  GTPVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGYIACTIAAI 130

Query: 152 LAVIAIVFGATNG 158
           LA IAI+FG T G
Sbjct: 131 LATIAIIFGVTKG 140
[Close]
BLAST of Spo11056.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VF56_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G176500 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.200e-45
Identity = 88/139 (63.31%), Postives = 102/139 (73.38%), Query Frame = 1 

		  

Query: 30  QQQYYGTFQGVACYTQPPPQ----PAVGFPHPAPPPGAAVPSA----YFTRGYQTVPGYA 89
           Q   YGTFQGV+ Y  PPP     PA+GFP P PPPG   PSA    Y+ +GYQTVPGYA
Sbjct: 15  QHHQYGTFQGVSNYPPPPPPQHHGPAIGFPQPVPPPGLHEPSAPPPQYYPQGYQTVPGYA 74

Query: 90  IAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPGLVACMV 149
           +AEGRP RE RLPCCGIG GW LFI+GFF  AIPWY+G  +LLC R+DYREKPG +AC +
Sbjct: 75  VAEGRPVRERRLPCCGIGFGWFLFIIGFFLGAIPWYIGLFVLLCARIDYREKPGYIACTI 134

Query: 150 ASILAVIAIVFGATNGYDD 161
           A++LA IAI+ G T G DD
Sbjct: 135 AAVLATIAIILGVTKGIDD 153
[Close]
BLAST of Spo11056.1 vs. ExPASy Swiss-Prot
Match: R18AL_ARATH (60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana GN=At1g29970 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 1.800e-25
Identity = 69/152 (45.39%), Postives = 88/152 (57.89%), Query Frame = 1 

		  

Query: 21  PTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFP-HPAPP-PGAAVPSAY-------FT 80
           P    V    Q YYGTFQGVA +  P P P    P HP    PG A  +         + 
Sbjct: 8   PRDSTVNQQHQYYYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYA 67

Query: 81  RGYQTV-PGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDY 140
           +G+  V P Y + E RP  E  LPCCG+G+GW LFI+GF F  IPWY+GA I+L   VD+
Sbjct: 68  QGFPVVVPDYTVVEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDH 127

Query: 141 REKPGLVACMVASILAVIAIVFGATNGYDDIW 163
           REK G VAC +AS++ +IA++ G T G  +IW
Sbjct: 128 REKAGYVACSIASVVYLIAVMLGMT-GDINIW 158
[Close]
BLAST of Spo11056.1 vs. TAIR (Arabidopsis)
Match: AT1G17080.1 (Ribosomal protein L18ae family)

HSP 1 Score: 158.3 bits (399), Expect = 4.000e-39
Identity = 81/138 (58.70%), Postives = 98/138 (71.01%), Query Frame = 1 

		  

Query: 29  SQQQYYGTFQGVACYTQPPPQ---PAVGFPHPAPPPGAAVPSA-YFTRGYQTVPGYA-IA 88
           +Q   YGTFQGV+ Y  PPPQ   P  GFP P+ PPG     A Y+  GYQTVP +  +A
Sbjct: 18  NQHHQYGTFQGVSNY--PPPQNSAPVTGFPQPSAPPGVYDSGAPYYAHGYQTVPVHGGVA 77

Query: 89  EGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCG-RVDYREKPGLVACMVA 148
           EGRP R+ RLPCCGIG+GW LFIVGFF  AIPWYVG  I++ G R+DYREKPG +AC +A
Sbjct: 78  EGRPVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGLFIMMFGRRIDYREKPGYIACTIA 137

Query: 149 SILAVIAIVFGATNGYDD 161
           +ILA IA++ G + G DD
Sbjct: 138 AILATIAVILGVSKGADD 153
[Close]
BLAST of Spo11056.1 vs. TAIR (Arabidopsis)
Match: AT1G53560.1 (Ribosomal protein L18ae family)

HSP 1 Score: 146.0 bits (367), Expect = 2.100e-35
Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 1 

		  

Query: 34  YGTFQGVACYTQP----PPQ--PAVGFPHPAPPPGAA---VPSAYFTRGYQTVPGYAIAE 93
           YGTFQGV  Y  P    PP   P +G P P+PPPG+    +    + + +QTV GY +++
Sbjct: 16  YGTFQGVPTYPPPSYPHPPSHHPVIGIPQPSPPPGSPHHDISVHQYIQEHQTVAGYPVSQ 75

Query: 94  GRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPGLVACMVASI 153
           GRP R+ RLPCCG+G+GW LFI+GF   AIPWYVG  IL+C R+D REKPG VAC +A++
Sbjct: 76  GRPARQNRLPCCGLGLGWFLFIIGFLLGAIPWYVGVFILVCARIDPREKPGYVACTIAAV 135

Query: 154 LAVIAIVFGATNG 158
           +A I IVFG   G
Sbjct: 136 VATITIVFGVMGG 148
[Close]
BLAST of Spo11056.1 vs. TAIR (Arabidopsis)
Match: AT1G29970.2 (60S ribosomal protein L18A-1)

HSP 1 Score: 105.1 bits (261), Expect = 4.000e-23
Identity = 61/132 (46.21%), Postives = 74/132 (56.06%), Query Frame = 1 

		  

Query: 21  PTAPFVQPSQQQYYGTFQGVACYTQPPPQPAVGFP-HPAPP-PGAAVPSAY-------FT 80
           P    V    Q YYGTFQGVA +  P P P    P HP    PG A  +         + 
Sbjct: 8   PRDSTVNQQHQYYYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYA 67

Query: 81  RGYQTV-PGYAIAEGRPFREPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDY 140
           +G+  V P Y + E RP  E  LPCCG+G+GW LFI+GF F  IPWY+GA I+L   VD+
Sbjct: 68  QGFPVVVPDYTVVEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDH 127

Query: 141 REKPGLVACMVA 143
           REK G VAC +A
Sbjct: 128 REKAGYVACSIA 139
[Close]
BLAST of Spo11056.1 vs. TAIR (Arabidopsis)
Match: AT3G14595.1 (Ribosomal protein L18ae family)

HSP 1 Score: 94.0 bits (232), Expect = 9.200e-20
Identity = 55/133 (41.35%), Postives = 72/133 (54.14%), Query Frame = 1 

		  

Query: 30  QQQYYGTFQGVACYTQPPPQPAVGFPHPAPPPGAAVPSAYFTRGYQTVPGYAIAEGRPFR 89
           QQQ    FQGV+ Y      PA G+P PA P                  GY +   RP  
Sbjct: 19  QQQPPPPFQGVSNYPPQQQPPATGYPQPAQP---------------YAQGYVVNGVRPTE 78

Query: 90  EPRLPCCGIGVGWLLFIVGFFFAAIPWYVGALILLCGRVDYREKPGLVACMVASILAVIA 149
             R  CCGIG+GW+LFI+GFFF A+PWY+G  +LL  R + RE+PG +AC V ++ A I 
Sbjct: 79  HGR--CCGIGIGWVLFILGFFF-ALPWYIGFFLLLFSR-NPRERPGYIACAVGAVFATII 131

Query: 150 IVFGATNGYDDIW 163
           ++FG   G   +W
Sbjct: 139 VIFGTVRG-SGVW 131
The following BLAST results are available for this feature:
BLAST of Spo11056.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902207268|gb|KNA15662.1|2.0e-88100.hypothetical protein SOVF_0961... [more]
gi|731372517|ref|XP_010666371.1|1.8e-5771.3PREDICTED: 60S ribosomal prote... [more]
gi|703085474|ref|XP_010092747.1|5.8e-4868.760S ribosomal protein L18a-1 [... [more]
gi|1009162393|ref|XP_015899412.1|2.7e-4562.7PREDICTED: 60S ribosomal prote... [more]
gi|225462958|ref|XP_002268796.1|4.6e-4567.6PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo11056.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RA86_SPIOL1.4e-88100.Uncharacterized protein (Fragm... [more]
A0A0J8B597_BETVU1.3e-5771.3Uncharacterized protein OS=Bet... [more]
W9QZI1_9ROSA4.0e-4868.760S ribosomal protein L18a-1 O... [more]
D7SX30_VITVI3.2e-4567.6Putative uncharacterized prote... [more]
A0A0D2VF56_GOSRA4.2e-4563.3Uncharacterized protein OS=Gos... [more]
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BLAST of Spo11056.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
R18AL_ARATH1.8e-2545.360S ribosomal protein L18a-lik... [more]
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BLAST of Spo11056.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G17080.14.0e-3958.7Ribosomal protein L18ae family[more]
AT1G53560.12.1e-3552.6Ribosomal protein L18ae family[more]
AT1G29970.24.0e-2346.260S ribosomal protein L18A-1[more]
AT3G14595.19.2e-2041.3Ribosomal protein L18ae family[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 69..157
score: 9.6
NoneNo IPR availablePANTHERPTHR10052:SF9SUBFAMILY NOT NAMEDcoord: 69..157
score: 9.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0006260 DNA replication
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0043687 post-translational protein modification
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0010050 vegetative phase change
biological_process GO:0016310 phosphorylation
biological_process GO:0008283 cell proliferation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0008152 metabolic process
biological_process GO:0019521 D-gluconate metabolic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006574 valine catabolic process
biological_process GO:0006306 DNA methylation
biological_process GO:0033528 S-methylmethionine cycle
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0050821 protein stabilization
biological_process GO:0042550 photosystem I stabilization
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0016573 histone acetylation
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009780 photosynthetic NADP+ reduction
biological_process GO:0009773 photosynthetic electron transport in photosystem I
cellular_component GO:0044428 nuclear part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0005737 cytoplasm
cellular_component GO:0030093 chloroplast photosystem I
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0000785 chromatin
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005778 peroxisomal membrane
molecular_function GO:0008442 3-hydroxyisobutyrate dehydrogenase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity
RNA-Seq Expression