Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAACCCAAAGTTAATTATTGCTGTACCGCAAGACACTACCCGTGATAACGCGGGTAACCGGTTGAACGGGTCGGGTTATAGGCTGCGTTTTCAATTACCGCTTTTATACCCGGTAATAACCCCGCGCTTTCATTCCAACTTCACTGGCTTATTGGAAAAAAAAACTCAGCAGAGGCTTCTTTGCAGTTCGCACCGCCGAACCTCACGCATTCCACACCCTGCCACCACCCTGTTTGCCGGTCGTCATCCCGCTTCTCACCACCGCCACCAACCTTCTCTCCTCTTCCGTAATAATCGAGGCCGCTGTCCTCTCTATCTCGCCGGCCATATCTTCTCGCCGGCCATATCTTCTGTTTCTCCTCTTTTCTCAAGGTTGGTTCATAACGTTTTTCGATTCTCCTGTTTTGTTTGGTCTTTATATTTAATTTCCGTTTAATGAGTGGAGCATAATGAGTTGAGGGCTAATCTCCCAAGTATTGGATGAAAGTTACAAATTAGGGTTCTGATATTTGTGGTTTTTGAGTAATCCCTTAATTTATGGGTTTTGTATGTTAACTCAAACTTCAATCTATTTGATTCTGAAATATAAATTGTTTGTTTTGGTGGTATTGTTGTACAGGAGTTAGTATGGATTTTTCTAGAAGGCGTGATTTTTTGTTCTGTGGCTCATGTGGGACGATGTTGTCTTTGCCATCAACTAAGTATGCTCGATGCCCTTTGTGCCGCACTAAGAAAAATGTCAAAGGTATTACTTTCTGCCTTCTTTCTAGTTATCTTCTGACCTTTATTGTTTCTTTGATGCTGTATTTAACTATAAGCAAAGGAAATATATTTAGCTTGGATTGAGTTGAGTCGAGTCGAGGCAAGGAACAAGATTAGATTGAAGGGTATGTACTGATGATAGAACCCCTTATGTTGGATTTGAAGGAGATTGTTTGATTAATTCAATAGTTTTGAACTTTGAATGTACTAGGAAGATAATTGGGTGGGAGAGTATGTCATCAACTCTGAGGGTAGAACAAATAGATTTTATCTAGTGAGTGTAAGAGCAATATTATTGGTTAGTCCATCAGCCAATTTTGATCTGACTAATTAGTGCACTAGTCGCAAATTGCTTCGTGATAGTTATGGCGTGGATGTTGAATGCTTGAAGCTATAAACCAAGACACTTGGATATGATATGAAGGCTGGTTACCTAGTTGGAAATTGAGTGCCATGGATTTAATTCTTTAAAGTTTGAACCCCACGAATTCATTTGTTAACATTATGTACCAAGTTTTGAGTTCACCCTCATGACTATAGCAATATGAATTTATGGATTCATACCAATCATAAACACGTGAAGAGCATTTCTGTTGTTGATATGTTCATTTCTATGGGATTATGGGAAGTCATTGCTAGGAGTTATTATTGAGCTTTCAGGAAATATGTATTTGAGACAAAGATCTTGTAAGTCGGAGCTTTATTGGATAGATGGTCTTGCAACCTAAGTGTATTAGTTGTGTATTGTTTTAGTAGCATCTCAATCAATGGTGTGTAACTTGCCATCTTATGTGACTTGTGAGTCATTTTATTTAATGAACTACAACTCTACAAGGATTTGCTATCCTGTCTAACACCAAAAGAATTTGTTTCTGTTTTTATATTTTGATTGGTAAGTAGGAAAATATTGAAATCTCAAATACCAGTTACAATGTTCAACCTTCCCGAGGAAGGCTTAAGTTCTAGAAAGGGCCTCCCCAAAGCCAAAGAATCATTGACAGATTAAGAACGGAAAAAAAAACATAAGGCACAATTGAGGCCAAAAGTTACAAGGCTTTACAAACACTAAACCATAATCTGTCATTACTAGATATCGTCTTTGGCATAAGCTATCCAACACGGATGGAAACTTGGGTCTTCACTTGTTTCACCAACTTATCAGGGTGGATGATTTTTCCATCCCACACAACACCATTTTTTTGCATAATACACAAGAGCCGCAAAAGCAGAAAAGACGAGTTTCTTTATAAAATATCTTTTGACATATTAAAGCATCCACTTACTACAAAAAAAAAAACATACTTTGTACAAGGAATTACTGTAGTGTTTAAAAAAGCGCGCTTAAGCTCTGAAGCGCAAAGCTTGAGGGCAAATTGCTTAATTAGGTCTGAGCGAAGCCTTATGATTAAGCGCCGAAGCGCGCTTAAGCGCATGAAGCACGGGAATCGCAAAAAAAGCGCGATTTTTGGTGCTTCATTGAAATTCTTTTATTTTTTATTACTTTACGTTGAAAGCTTTTTTTTAATATGTTATTATGTTTTGGACCACACCCTATGAATCCTTAACTATAGAAAGTAGGCCAAGAGTTCAAAAGAAAAGGAAAAAGAAGAAAAGAAGAAGACAACAGTCATAACAGCCGGTCCTAGCTTCTGGATAAACACTGTGTTATATGCTTTATTTTTGTTAAAACAAAGAATAATATATTTTAGGAAGCAAATCTGATGTATTTGTGGTTATTTTAGTAAGATATATATATACTTCGTACATAATAGTAAAAAAACCTTTAATTCTTAAAATGTGTGCTTCACTTCGGTGAAGCGCGTCTTGCACTTCCGCTTTACGCTTAAGCTCTAGGACTCATATCGCTTTAGTGCTCTTTGCTCTTATGTATACACTGGGAATCGCCTCAGTCCAATAAATCTGACTGTAGGGGAAAGAGAAGAAGAGTTGATCATTGGTCTCAGTATGTATTATTCCCACACAAACGACAGTTGGTCTCATCAACGGTCTTTAGTCACACAACTAGTTTCAACATGTCTAGCATTGCTAATCGTGCAATGAAACAATGCTTTGGGATGTTTAGTCAAACCAGATTATGCCTGGAAAGCTTGGTTAAAGCAGGTCTAAGCCACTTATACCCTCTAGACATACTATATCCTTTCATAGGATTAGCCTTCAAAATATTACATGATTGACCCAAATGTGAAGGTGTGATTTTTCTAGTGTGTTTAGCTCTTTCCTTCTACTATCTGGATATTTTCTGTTTTTCTTCTTAACTGTTAAAACTATCCGGAAATGCATATTATGACATAAGAGTACTATTGCTTTGGTTATGCTCATGAACTAGTCATTGTTGGATACTATCACCATAGTTATGCCTGTCTATGTTTTAACAATTTTTCCAGCTCTTGTTTGATCTTATGACAGTATGATATTTATAATGTGTGTTGATGTTTTCAGATGTTGAAGGAAAGGAAACATGTTATACAGTTTCCGGAGAGGTATGGTTAATTAGTTATGCTGCTCTGTTTGCTTTCTTATTTACTGGAGCTTATTATGTCCCCAGTGCGTTACAAATTTCAATTTCTCATTAACCACTAGAAGTACATGGATAATGAATTGCATACATTCTTGATATTATCAGCCTTGTTTCGTATTTTCGTATTATTTGATAGTTGGTTTAATCTCCTAGCTGATTGTATGAGGACTTTTTACACTATACAAAATATCAATGCCGTGAAGAGCAAAAGTGAAATCTTAAAAAATGAAAATAAAAACAGAATAAAGTAGCAGCCAGAGGCTCCCCGGAAAGGGTTGGGGAAAATAAATGGAAAGTCCATGTCTGAACCATGCGTTTTGACCTAATGTAATGCATTTTGACCTAATGTAATGCATCAAGAATAGGGGAATGGGTACTTTAGGTAATACAAAAAGTTAATGTTATTCTTAGCTTGGGTAGGATTGCAACTAGGGAGTTATATAGGTGAGATCAATTAGAGAGGAGGTATGATAAAAATGATCAGAGTTTTGTTTGTTTAGTGTTAGCTTTTTGTTTAGGGAGAGTCCAGCTACTCAACTCGCGTCGTCNAGTTTTGTTTGTTTAGTGTTAGCTTTTTGTTTAGGGAGAGTCCAGCTACTCAACTCGCGTCGTCTTATAATCGACTGTTGTTTTTCCCCCAGATGCCCTTGTCCTCATTCTCTTTTCTATATTTCTGATTTCCAGTCTTATAATCTTACATCACTTCAATCAGTGTTAACGCCTCCATCAAACTTCTTGTTGGAGATAACATCGAGGTCTTTTCCCTATTTCTCCTTTATCAAACCGTGTATCATAGGTAAAATGATTCTAAATGCTGGGATGCTTGGGTTGGTGCACAACAGTAATTGTATTTGTAGTCACACTGAGTTTACATTTCTAATGGTTGATTAACCTGTTCTTATCTGCTGATTCTTGCAAGCAATGGGGGAATTAACAAACAAGGCTAGCTTTTCCAAGGAAATTGAGGCTAGTTTGTAGAGTTGCACGTCATGAATTTTTATGGATGCTTATTTATTCCCTAGATGATTACCTAAAGATTAGAATGAATGCTTATTTATTCCTGGTCCTGATGTAAGATGTTAGGTATTAGATGCTCCACCATCATTGAGTTTTTGCTACAGTGTGTGTGTGTGTGTGTGNGTTTGGGGGGGGGGGGGGGGTGAGACTTGAGAGCTAGCAGGTACTTGGTGTGCTTTCATGGAAGCCTCTGAATTATTTACTGAACCTTGGCCGGATTTGGTAGATTCTGTTTATTTTGTTTATAGAGGAAATCCTGATTAAGCACACTTGATATCCAGCCTATTTTTGAAACCATAAAATCGAACTTTAGTTAAAATTTCTTCTTTCAGAATATTATTAACATGTATAATTTGTTGGCAAGACTCGATGACTGGGCTGAGTGGCGATACCCTCTTCACAAAATAGTTCCGGTTCCACAGATTGTTGGGATGACTGGTGATACCATTGTTACATCATACATGTCAAAAGCTTTTGTCTCTGATGCCAAAGAACGACATCCTCCAATAAATATTGTTGTTCCCTAGGAATCTAGGACCCCTTCAGCCTTCATACCTACCTATCTGGTCAGTAATGTCTTCTGCTGTTGTTATTGTTGTATACTGTGACATGATCCCTAGCCTGAGATTAAGGTTTACAAGGTGAACTACTGAAGTCTTCTAGAGACATAAAGAGGGTTTAAGTTTGTAAACCACAGGGACTCTTCATTTCTATGCTGCCTTCTTCTCACCCATTCTGTAATATACTCTGACGCTCCGTAGTGAGTAAATCTTCCTTTTAAATGCTATTTCGCTGGCTATTAGATGGTGGTAGAAGATTCTTGGGTATTCTTTGATTTCTTGGTTATTTTTTTAAGTAAGAATGACCATAAATAATCCCAAGTAACTTCCATCTTTTAAATTAATTTTAATTCTGTGTTTTATGGGGACTTTCTCAAAATAGTTCAAGTGTTAGTTTTCTTATCTTTGTTGGGTTTTTTAGGGTTAGTTGTGCAGGAAAGAAACACTTAAAATAATTTTGAAAAGACAGCCCCAGAACTTGGTATTATTTCTGAATAATCAAATTATGGGATTAATTTAACATGAAAGAGAATTAGGATTATGCGTTTCATTTTTTTCTTAAAAATTTCACTGGGTCCTCTTAGTTGCTTCGAACTGACTTCAGACTTTTTCCATATTACATACTAAGAACTTTTATTTGATACTTCCTCCATTTTTTTTTTTAATTGCACCATCTGGGATTTCACGCTTGCCAACGCACTATTTTAACTACTAGTATCTCTCATTATACATTTTAAAAAATTATAAAAATTTGATAATTTGAAAGTATATTTCGAGACGAATCTAACAAGATCCCACATGAGTATATTTTTCCTTACATATAAATCACAAAAAATAACTATATAAGAATAAGAGAATAGTGCTAAAACCAAGATGGTGCAATTATAAAAAAACGGAGGAAGTACATCGTATGTTTTATTTTTTTTGGGTTTAGCTGACACTTTCTGGGTTATTTATCCTATAGGATATTAGAAGGGCATTACAAATGGAGCCATTCGTGAAGGTGGATGGAGTGATGTCTGGCGAAGTGAAAGTACAACGACAAGAGGTAAGTGGAGCTGATATGAAAACCTGTAAATACAGCGTTGTCATTTCCTGGAATGTGGAGTTCTGATGTCTGTTGTTGGTGTAATTTTCTTTGCAGATTAACCAACCATGTGAAAAGTGCGCACACAGTCCTGTTGAGCTGGTTGATTCAAGACAAGTAAGCTCTATAACATTTTGCACTTATTTTTCACTTATTTGTTTAACTTGATTGCTCATTTGGAGAGCTGAATTTAAAATGTATACAGACGAGATCAGCAGATGAAGGACAGACTAATTTCTACGAGTGCCCTTCATGTCGACACCGTTGGAAGGAAAACTCTTAGCTCTTTTTTTCAAGTATATTGTGGGAGCTACGTTGTTGGTTGTCATCTTGAAGCCATTATTTGGTAATTTTGCTTGTCTAACCCGTCAGTTTTGGTGCATGTTGGGTTATAAACTTCCGCAGCAGGTTGGGTTGGGAACATTGTATGGTACTCCATATCTAGTTTGTAGTACAACGTACATGTTCATTTTGCGATATGGAGTATATCTTTGTGCTATCAGGTAATAGATAATATACCTTTCATGTTATTTATTCCATCGCTTGCATCATATTCTTTTTAAGGGAACTCCAAAATAGTTTTTTGATGAAGTTTCAAAATACTTCAGTTGCTAACGTCTCTATGATTGGTAGCTATTTTGTGCCTTTAAACAAAATTTGTATTACAATCTTCTAGAGGCAGTAAATACAGAACTTGTCTTCTCTCCATTTTCGTAGATCACTTTGAAGTTTGAAGTTATGGCACATATATTTGTATTGTCAAAAACATTCTATGAAGATGGACTTTATTGGTAGAGCTTTTCTATGTCAGCGTTCCATATGTTTGGGACTTGTTTGGTTGACCTGGGGAATTAAATCTCACATAGGAAGTACTTCAAGGGAAGTTACTTCCTTTATTTATTAAATTCCTACGAAACTTACTTCCCATCGGAATTTTCCATGCAGTTTGATTGAACGGGGGTTGGGGGGCGCTTGGAAATTTACTTCCCATGTTTTTGGAGGAAGTCCAAATTCCATTGAGTTTCAACTTCATTTTTTAATTTTTATATCAACCAAACAACGGTCTTGAGCTTCCTTTTAAAGCACAGTTGAAATCGATCACAATACAACGAGTTGACAAACAAGCTTGAGATATCAATCGTATCTATCTTTGTTCGGGATTGAATTTGGATCCAATGCCTCAATTCGTGGAGGTGTTTTGGGCTTGTTTTGATCGGATTGGCATGTATTGGTCATAATCGTCTTATTCTTTTGCACTTTAAGAGCATATCAAGCTCATTGTCC ATGAAAAACCCAAAGTTAATTATTGCTGTACCGCAAGACACTACCCGTGATAACGCGGTTCGCACCGCCGAACCTCACGCATTCCACACCCTGCCACCACCCTGTTTGCCGGTCGTCATCCCGCTTCTCACCACCGCCACCAACCTTCTCTCCTCTTCCGTAATAATCGAGGCCGCTGTCCTCTCTATCTCGCCGGCCATATCTTCTCGCCGGCCATATCTTCTGTTTCTCCTCTTTTCTCAAGGAGTTAGTATGGATTTTTCTAGAAGGCGTGATTTTTTGTTCTGTGGCTCATGTGGGACGATGTTGTCTTTGCCATCAACTAAGTATGCTCGATGCCCTTTGTGCCGCACTAAGAAAAATGTCAAAGATGTTGAAGGAAAGGAAACATGTTATACAGTTTCCGGAGAGGATATTAGAAGGGCATTACAAATGGAGCCATTCGTGAAGGTGGATGGAGTGATGTCTGGCGAAGTGAAAGTACAACGACAAGAGATTAACCAACCATGTGAAAAGTGCGCACACAGTCCTGTTGAGCTGGTTGATTCAAGACAAACGAGATCAGCAGATGAAGGACAGACTAATTTCTACGAGTGCCCTTCATGTCGACACCGTTGGAAGGAAAACTCTTAGCTCTTTTTTTCAAGTATATTGTGGGAGCTACGTTGTTGGTTGTCATCTTGAAGCCATTATTTGGTAATTTTGCTTGTCTAACCCGTCAGTTTTGGTGCATGTTGGGTTATAAACTTCCGCAGCAGGTTGGGTTGGGAACATTGTATGGTACTCCATATCTAGTTTGTAGTACAACGTACATGTTCATTTTGCGATATGGAGTATATCTTTGTGCTATCAGGTAATAGATAATATACCTTTCATGTTATTTATTCCATCGCTTGCATCATATTCTTTTTAAGGGAACTCCAAAATAGTTTTTTGATGAAGTTTCAAAATACTTCAGTTGCTAACGTCTCTATGATTGGTAGCTATTTTGTGCCTTTAAACAAAATTTGTATTACAATCTTCTAGAGGCAGTAAATACAGAACTTGTCTTCTCTCCATTTTCGTAGATCACTTTGAAGTTTGAAGTTATGGCACATATATTTGTATTGTCAAAAACATTCTATGAAGATGGACTTTATTGGTAGAGCTTTTCTATGTCAGCGTTCCATATGTTTGGGACTTGTTTGGTTGACCTGGGGAATTAAATCTCACATAGGAAGTACTTCAAGGGAAGTTACTTCCTTTATTTATTAAATTCCTACGAAACTTACTTCCCATCGGAATTTTCCATGCAGTTTGATTGAACGGGGGTTGGGGGGCGCTTGGAAATTTACTTCCCATGTTTTTGGAGGAAGTCCAAATTCCATTGAGTTTCAACTTCATTTTTTAATTTTTATATCAACCAAACAACGGTCTTGAGCTTCCTTTTAAAGCACAGTTGAAATCGATCACAATACAACGAGTTGACAAACAAGCTTGAGATATCAATCGTATCTATCTTTGTTCGGGATTGAATTTGGATCCAATGCCTCAATTCGTGGAGGTGTTTTGGGCTTGTTTTGATCGGATTGGCATGTATTGGTCATAATCGTCTTATTCTTTTGCACTTTAAGAGCATATCAAGCTCATTGTCC ATGAAAAACCCAAAGTTAATTATTGCTGTACCGCAAGACACTACCCGTGATAACGCGGTTCGCACCGCCGAACCTCACGCATTCCACACCCTGCCACCACCCTGTTTGCCGGTCGTCATCCCGCTTCTCACCACCGCCACCAACCTTCTCTCCTCTTCCGTAATAATCGAGGCCGCTGTCCTCTCTATCTCGCCGGCCATATCTTCTCGCCGGCCATATCTTCTGTTTCTCCTCTTTTCTCAAGGAGTTAGTATGGATTTTTCTAGAAGGCGTGATTTTTTGTTCTGTGGCTCATGTGGGACGATGTTGTCTTTGCCATCAACTAAGTATGCTCGATGCCCTTTGTGCCGCACTAAGAAAAATGTCAAAGATGTTGAAGGAAAGGAAACATGTTATACAGTTTCCGGAGAGGATATTAGAAGGGCATTACAAATGGAGCCATTCGTGAAGGTGGATGGAGTGATGTCTGGCGAAGTGAAAGTACAACGACAAGAGATTAACCAACCATGTGAAAAGTGCGCACACAGTCCTGTTGAGCTGGTTGATTCAAGACAAACGAGATCAGCAGATGAAGGACAGACTAATTTCTACGAGTGCCCTTCATGTCGACACCGTTGGAAGGAAAACTCTTAG MKNPKLIIAVPQDTTRDNAVRTAEPHAFHTLPPPCLPVVIPLLTTATNLLSSSVIIEAAVLSISPAISSRRPYLLFLLFSQGVSMDFSRRRDFLFCGSCGTMLSLPSTKYARCPLCRTKKNVKDVEGKETCYTVSGEDIRRALQMEPFVKVDGVMSGEVKVQRQEINQPCEKCAHSPVELVDSRQTRSADEGQTNFYECPSCRHRWKENS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11191.1 vs. NCBI nr
Match: gi|902185232|gb|KNA10455.1| (hypothetical protein SOVF_144290 [Spinacia oleracea]) HSP 1 Score: 267.3 bits (682), Expect = 2.200e-68 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1
BLAST of Spo11191.1 vs. NCBI nr
Match: gi|731361685|ref|XP_010692494.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 235.7 bits (600), Expect = 7.200e-59 Identity = 108/126 (85.71%), Postives = 119/126 (94.44%), Query Frame = 1
BLAST of Spo11191.1 vs. NCBI nr
Match: gi|720025589|ref|XP_010263999.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Nelumbo nucifera]) HSP 1 Score: 150.2 bits (378), Expect = 4.000e-33 Identity = 71/126 (56.35%), Postives = 92/126 (73.02%), Query Frame = 1
BLAST of Spo11191.1 vs. NCBI nr
Match: gi|731429993|ref|XP_003634465.2| (PREDICTED: DNA-directed RNA polymerase I subunit RPA12 isoform X1 [Vitis vinifera]) HSP 1 Score: 149.4 bits (376), Expect = 6.800e-33 Identity = 66/126 (52.38%), Postives = 89/126 (70.63%), Query Frame = 1
BLAST of Spo11191.1 vs. NCBI nr
Match: gi|672114069|ref|XP_008775237.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform X1 [Phoenix dactylifera]) HSP 1 Score: 141.7 bits (356), Expect = 1.400e-30 Identity = 74/151 (49.01%), Postives = 96/151 (63.58%), Query Frame = 1
BLAST of Spo11191.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QT80_SPIOL (DNA-directed RNA polymerase subunit OS=Spinacia oleracea GN=SOVF_144290 PE=3 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.600e-68 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1
BLAST of Spo11191.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFN6_BETVU (DNA-directed RNA polymerase subunit OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g020650 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.000e-59 Identity = 108/126 (85.71%), Postives = 119/126 (94.44%), Query Frame = 1
BLAST of Spo11191.1 vs. UniProtKB/TrEMBL
Match: M0T620_MUSAM (DNA-directed RNA polymerase subunit OS=Musa acuminata subsp. malaccensis PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.400e-29 Identity = 65/126 (51.59%), Postives = 85/126 (67.46%), Query Frame = 1
BLAST of Spo11191.1 vs. UniProtKB/TrEMBL
Match: J3LS48_ORYBR (DNA-directed RNA polymerase subunit OS=Oryza brachyantha PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 4.200e-29 Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 1
BLAST of Spo11191.1 vs. UniProtKB/TrEMBL
Match: F2D9U5_HORVD (DNA-directed RNA polymerase subunit OS=Hordeum vulgare var. distichum PE=2 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.400e-29 Identity = 65/126 (51.59%), Postives = 85/126 (67.46%), Query Frame = 1
BLAST of Spo11191.1 vs. ExPASy Swiss-Prot
Match: RPA12_BOVIN (DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus GN=ZNRD1 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.800e-9 Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 1
BLAST of Spo11191.1 vs. ExPASy Swiss-Prot
Match: RPA12_MACMU (DNA-directed RNA polymerase I subunit RPA12 OS=Macaca mulatta GN=ZNRD1 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.400e-9 Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 1
BLAST of Spo11191.1 vs. ExPASy Swiss-Prot
Match: RPA12_HUMAN (DNA-directed RNA polymerase I subunit RPA12 OS=Homo sapiens GN=ZNRD1 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.000e-9 Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 1
BLAST of Spo11191.1 vs. ExPASy Swiss-Prot
Match: RPA12_PANTR (DNA-directed RNA polymerase I subunit RPA12 OS=Pan troglodytes GN=ZNRD1 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.000e-9 Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 1
BLAST of Spo11191.1 vs. ExPASy Swiss-Prot
Match: RPA12_RAT (DNA-directed RNA polymerase I subunit RPA12 OS=Rattus norvegicus GN=Znrd1 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.300e-7 Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = 1
BLAST of Spo11191.1 vs. TAIR (Arabidopsis)
Match: AT3G25940.1 (TFIIB zinc-binding protein) HSP 1 Score: 124.8 bits (312), Expect = 6.300e-29 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 1
BLAST of Spo11191.1 vs. TAIR (Arabidopsis)
Match: AT1G20065.2 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 65.1 bits (157), Expect = 6.000e-11 Identity = 30/53 (56.60%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of Spo11191.1 vs. TAIR (Arabidopsis)
Match: AT4G07950.1 (DNA-directed RNA polymerase, subunit M, archaeal) HSP 1 Score: 48.1 bits (113), Expect = 7.500e-6 Identity = 32/114 (28.07%), Postives = 48/114 (42.11%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11191.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11191.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11191.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11191.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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