Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAAAATGTTGAACTCATCCATGAGTATTGACTATTGAGTAGTGATCAAGTTGCATAAGAATGAATGAAATGGAGGTTGGGTAGTAGAGAGAGAGTAGAGACATAGAGTTATGCAATGCATTGAATATCCCACCAAATTGTGTATCCTAAATTACTTGTATTTATTCACTTCTTTCCACCCACTTTCAACCCCCACTATATTTCCCAAACTCCTTTAATTTTCTCCTTGAATCTTCATCTTCTTCCTCTCAAACTTCACTGCAAATTTTCCCTTTACAAAAGATGGTGGGACCTGCCAGACCGCAGTTCGTGCTCTTCGGGTCATCAATTGTTCAATACAGTTTCAGTAATGGCGGCTGGGGCGCCATTCTCGCTGATCTTTATGCTCGCAAGGTTTATATTTGGAGCATTTAGTTCATTTGTTTTGATTTTGATTGTTTTGTGTTACTTTTAATTGTGAAATTTGTTGTCTTTGGTGCTGAAATTAGGGTATTCATGAATCAATGATCTTGTGGAAGTTGTAATAAGTTACTTCTTATTTGATTGAGAATGATGGCAATTATTTATTTTGATTGATTCATTATGTCACTATGTGTTTCATTGTGTATGTGAAGTTTCATTGAGATTAGGGTGTTTTTAGTTTAAAGAAGTTTGATATGTTGCTTGATGGTCATTTTTTGAGCTTCTTTTGATCTTTTTTATGGAAGGTTTGTAGTTGTTGATAGCCAATGAATTAGTCAACGTACATATCAGAATAATATTTTCATAATTAGCATAATATTTTCATAATAAGCAAATATATATTAGGCGTGTAATCTTCACCTTGCATAGCTAATTAAAGGCTAGATTCTAGGGCCTAATTAGCTATACAAGGGGAAGATTACAGTGAACTTGGGATATGAAATAGGATTAAGCAGTGTAGAAAGATGATTGTGATACGATAAGGGGAGATGCTTCACGGGTCTATCATTGTTATTGTTTGTTGCCATGAGATGGAAAATGTCACCTCAATTCTCGATACTTAGTCCCTATCGTATGGTACACCAACACCCGTGTCACACTAGAATTACGCTTTTTAGATTAAAGACACTCCTCCTAGCCAACAACAATGCCATGTTAGACAAGTTGTCGGGAAAGTAACTTCTAAATGACCATTTTCTATTTTAATTAAAGGAAGAGGTGGTTGATTAGTGACCCATTCGAACTATTAATGCTAGTTCTTAAAGAGGTGTTTGATTAGCAAGGTTTAAAGATGCACTGTTATAGAAAATGACTGAAATTTAAGGGCAATGTAGATGTGATTTCTTAAGAGTTCAATCATTTCATGTCATTATCGAGCTAGCTCTTGAGACGGATTGGTAGGAAGTTGCTATGTGGAGGAATGTATGATGGCTATGAGTGACAATCTTAATTAAAGTACTTTGCAGCTATGTTGGTTCTTATTCCATGTTTAATTAGCTTTAATATCCCCACCTCTCGCCCAGCTCCATCATAGTCATTCCATATGTCCTCTTATCTCTTGTATGTTTCTTGCAAATAAGACTGGTTTGTCCTCGCTTGCTCTTATTGAATCTTGGCTTTTTGATATTTTGCAGGCAGACATTCTTGTGAGAGGATATACTTGCTGGAACTCTCGCCGTGCACTGGAGGTCCTTGATCAAGTCTTTCCAAAGGTGATTCTCTCATTACTGTTATTCTTTAGGTTGCAAACAAAAACTTTCGACCCACCTCTTTATGTCAAATCTAACCGTACATAGTCTAAGTACTGTGAACAGAAAACTGAATGAATGTTACAGCATGAGAAGGTGTGATCTTGTAGAAACTATCAGAAAATGATGCACAAGTGCAGTGCAAAGGGTATTTTCTGGTTTTAGATAGATGTTATAGACAAGCTAATGTGTCTTTGAATGTAAGGGGTACCGTACAAAGAGAAGTATGGGTGTAAAAGTTATTGCTGTATTTCCCAGGAGATAAAATTAGAGCCAGGTACTTGGTAGAAATATGTTATTTGGAATAGGGCAGGAATTATTTCATGTCTTGTCACTCTTGGGTTTTCTCTCTAGGAAATAGTCCATGGAAGGCTCATTTGACATTATCAAAATACATGCAATAGTGAGTGGGATTTGGAAGTTGAATGTTTGATTTTATGATCTATTGTATCCTTGGCCTTTCTATTATCCCTTTAGGCTAAAGCGTTACTGCCAATTCCTTTTTTTAAAAAAAATGGAGATGGTTCTGTGAGTAGTGGCTAGCAGGAGACTCATGCTCATCTCAGCGGATATGTTTGTGCATGAGTTGAGCAATTTGGGTCTGAAAAAATGCTATTGTAGCCTCTGAGTTCCCTGCAAGATGGATTTCAAAGCCGTAGAAATGCTGTTCATTGTGTGTGTGTGTGTGTGTGTGGACCATCACTCATCAAGGAGTTGGTGCCTCGTACTACTAATCTGTTGACAACTGTCAGTTCCTAATTGCTTGTCCTGTTACAAATATTTCTGTTTTCTCTGAAATCGCCTGTGATGAAATTACTTTTCTGGCTATGCACTGCAACAATAGTCGGTTTTCAATTCGTGAATCCATTTACCTTAGTAGGTTAGTTCTGCTGTTTTGTGATAGTCTGTTTCACTAAGGGAAGGGATAATAGAAATCTGTCCCTCATCCTGCCCACAGTCCCACCCCTCTCTCCCCCTCTATGTCCCCCTCTTGCTTGTGTCACTGTCTTTGTCTGTGAGTCTCTGTGAGATGAATGAATTTTTTACTTGTTAGAAAGCTTTTCTTTGTTTGAAATATGGTCGGACTTCTTCTAGAAAGTATGTTACAGATAATGTCTTAAGCTGGGTTTGTTTTGTGCTATACTCCACATTACAAAATTTGTACTGCAGTGCCTTAGATCTTCATTCCATGCTGATCTTGTGTATTTAACATCGGTTTTTATTTTATTTTCCCTTGTAGCTAAAAGTTTGACCTTGATTTAATGTTCTTGATTCTAGGATGCTGATACTCAACCTTCACTGGTAATAGTATACTTCGGAGGTAATGATTCAATGGGCACCCACCCGTCAGGTCTCGGCCCTCATGTGCCACTTCCCGAATATGTTGAGAACATGAGAAAGATTGCCACTCATATTAAGGTGTTGCTTCCTTCTTCCCTAATCCCTATTCAATATGTTTAACTCATAGGCTGTGTTTACTTCATGTAACTATCAATTAATTGTATAAAGCATGTTCTTGAGGCTTTGAAATAGTCTGACGTTCTTTCATCAGTCTTAAATTTTGCATATCTTATGAACCTGTTCATGTGATGAGGCTTCTCTTAAGATTCAGGAACTATATGTCAGAACTATATTTCACCTGAAGGACTCATTTTAATGTCACAATGCATATTATCTTGACTTGGATCTTTTTCGCTTACATATTATTTGAAGTCTAACCTAAGCATTTGAAATTTAGGGTCTTTCAGATACAACTCGGATTATTTTCCTAAGCAGTCCTCCGGTGAATGAAGACCGTATTCGGGAAACCAGAAGGTTCTCCTCTAAGATGTTTTGTTTTGTTAAACTTTTATCAAATCAGGTTGCTAATTCTGCAATAGGTATTTCTGTTGAACCAGTATATATCTATCGGATCTAATTCGAACGAATGAACGATGTCAAAAGTATTCTGAAGCTCTGATAGAACTGTGCAAGGAAATGGATATGAAAGTGGTTGATCTTTACACTGCAATCCAGAGGAAGGATGACTGGTTGACAACTTGTTTTACGTAAGTTTTTTTTTATATTTAACCAGTTTGATAACTTTCACTTTCTGCAGTAATCCTGAATTACTTTCACATGCATTTCACATTGAATTATACTTAGAATCCTTTCGATGAAAACCCTGAAACAAAGGATTACTTTATTCCTCTTCAAAATGTTACTACCTCCATCTCAATTTTATTTCCTCTCTTTCTAAGAGGTTAAAGCTGAAAAACATTAGCCTTAGCCTTACCAATGTAGAACATTTTTTTGGAATTCTTCTAAAAGACATCAAGAAAATATGAGAAAGTTCGAAAAGCTTCAACATAATATGTGACGAACTTGTTAATTGAACGGAAGAAGTATATTTATATCTGGTTTAGGAAGGTAAGCAAAGTTAATGTGTTGGAAGTTGTATGTGGGCAGAGATGGAATACATTTCTCTGAAGAAGGAAGCAAGATATTGGTAGAAGAGATACTGAAGGTGATCAAGGAAGCAGATTGGGTGCCGAGTTTGCATTGGAAGTCCATGCCAACTGAATTCTGTGAAGACTCCCCTTACTATATGGTTTCTATTGATGGAACTCAAACGCTCAACGGATCTGACTGGACATTTCACCGGGATATACAGTGGGACTAAACTGGTTTAAACTTGGCGGGATCGAGTATTTTCAGAGGAAATGGATGAATGGCCATGTACTAGCTTATACTTTACCTTGATTGTACTTTTATTGTACACAATGAACAATCATGGATTGATCATTTACTCATTTAGGCTTGTGTAGTTTTTTGGAAACTTTGTGGCTTAATAGTTACGGAGTATATAGCTTGCTTAATATGTTGTACGTTCTTGGTTGATTGTTGACAACTACTCTCATCTTCGGCGAAAGTATCATAACAAAGTTGTGCATGTTCTTGTAACTAGCAAAACTTTGCTTGAGCCAAATACACGCAACCGAATGACTCATCAAACACGAAATATGACCCGAGTTATGCCAACATGAACCACCGCGTTTGCCATCAGCAGGAGCTGAGCCATATAATGACATAATGCATAGCTATTCTTTGGCTAATTTCTCTATGCATCTAGCTTCGTAGTCAAAGATCAAAGAACTGGTACTCAAATTATAAAGAGTAATTGATAAGGGATCAATTTTATTATAGATAAGAAGAAGGGACCTATTGAACCAGCATCTA TTTAAAATGTTGAACTCATCCATGAGTATTGACTATTGAGTAGTGATCAAGTTGCATAAGAATGAATGAAATGGAGGTTGGGTAGTAGAGAGAGAGTAGAGACATAGAGTTATGCAATGCATTGAATATCCCACCAAATTGTGTATCCTAAATTACTTGTATTTATTCACTTCTTTCCACCCACTTTCAACCCCCACTATATTTCCCAAACTCCTTTAATTTTCTCCTTGAATCTTCATCTTCTTCCTCTCAAACTTCACTGCAAATTTTCCCTTTACAAAAGATGGTGGGACCTGCCAGACCGCAGTTCGTGCTCTTCGGGTCATCAATTGTTCAATACAGTTTCAGTAATGGCGGCTGGGGCGCCATTCTCGCTGATCTTTATGCTCGCAAGGCAGACATTCTTGTGAGAGGATATACTTGCTGGAACTCTCGCCGTGCACTGGAGGTCCTTGATCAAGTCTTTCCAAAGGATGCTGATACTCAACCTTCACTGGTAATAGTATACTTCGGAGGTAATGATTCAATGGGCACCCACCCGTCAGGTCTCGGCCCTCATGTGCCACTTCCCGAATATGTTGAGAACATGAGAAAGATTGCCACTCATATTAAGGGTCTTTCAGATACAACTCGGATTATTTTCCTAAGCAGTCCTCCGGTGAATGAAGACCGTATTCGGGAAACCAGAAGTATATATCTATCGGATCTAATTCGAACGAATGAACGATGTCAAAAGTATTCTGAAGCTCTGATAGAACTGTGCAAGGAAATGGATATGAAAGTGGTTGATCTTTACACTGCAATCCAGAGGAAGGATGACTGGTTGACAACTTGTTTTACAGATGGAATACATTTCTCTGAAGAAGGAAGCAAGATATTGGTAGAAGAGATACTGAAGGTGATCAAGGAAGCAGATTGGGTGCCGAGTTTGCATTGGAAGTCCATGCCAACTGAATTCTGTGAAGACTCCCCTTACTATATGGTTTCTATTGATGGAACTCAAACGCTCAACGGATCTGACTGGACATTTCACCGGGATATACAGTGGGACTAAACTGGTTTAAACTTGGCGGGATCGAGTATTTTCAGAGGAAATGGATGAATGGCCATGTACTAGCTTATACTTTACCTTGATTGTACTTTTATTGTACACAATGAACAATCATGGATTGATCATTTACTCATTTAGGCTTGTGTAGTTTTTTGGAAACTTTGTGGCTTAATAGTTACGGAGTATATAGCTTGCTTAATATGTTGTACGTTCTTGGTTGATTGTTGACAACTACTCTCATCTTCGGCGAAAGTATCATAACAAAGTTGTGCATGTTCTTGTAACTAGCAAAACTTTGCTTGAGCCAAATACACGCAACCGAATGACTCATCAAACACGAAATATGACCCGAGTTATGCCAACATGAACCACCGCGTTTGCCATCAGCAGGAGCTGAGCCATATAATGACATAATGCATAGCTATTCTTTGGCTAATTTCTCTATGCATCTAGCTTCGTAGTCAAAGATCAAAGAACTGGTACTCAAATTATAAAGAGTAATTGATAAGGGATCAATTTTATTATAGATAAGAAGAAGGGACCTATTGAACCAGCATCTA ATGGTGGGACCTGCCAGACCGCAGTTCGTGCTCTTCGGGTCATCAATTGTTCAATACAGTTTCAGTAATGGCGGCTGGGGCGCCATTCTCGCTGATCTTTATGCTCGCAAGGCAGACATTCTTGTGAGAGGATATACTTGCTGGAACTCTCGCCGTGCACTGGAGGTCCTTGATCAAGTCTTTCCAAAGGATGCTGATACTCAACCTTCACTGGTAATAGTATACTTCGGAGGTAATGATTCAATGGGCACCCACCCGTCAGGTCTCGGCCCTCATGTGCCACTTCCCGAATATGTTGAGAACATGAGAAAGATTGCCACTCATATTAAGGGTCTTTCAGATACAACTCGGATTATTTTCCTAAGCAGTCCTCCGGTGAATGAAGACCGTATTCGGGAAACCAGAAGTATATATCTATCGGATCTAATTCGAACGAATGAACGATGTCAAAAGTATTCTGAAGCTCTGATAGAACTGTGCAAGGAAATGGATATGAAAGTGGTTGATCTTTACACTGCAATCCAGAGGAAGGATGACTGGTTGACAACTTGTTTTACAGATGGAATACATTTCTCTGAAGAAGGAAGCAAGATATTGGTAGAAGAGATACTGAAGGTGATCAAGGAAGCAGATTGGGTGCCGAGTTTGCATTGGAAGTCCATGCCAACTGAATTCTGTGAAGACTCCCCTTACTATATGGTTTCTATTGATGGAACTCAAACGCTCAACGGATCTGACTGGACATTTCACCGGGATATACAGTGGGACTAA MVGPARPQFVLFGSSIVQYSFSNGGWGAILADLYARKADILVRGYTCWNSRRALEVLDQVFPKDADTQPSLVIVYFGGNDSMGTHPSGLGPHVPLPEYVENMRKIATHIKGLSDTTRIIFLSSPPVNEDRIRETRSIYLSDLIRTNERCQKYSEALIELCKEMDMKVVDLYTAIQRKDDWLTTCFTDGIHFSEEGSKILVEEILKVIKEADWVPSLHWKSMPTEFCEDSPYYMVSIDGTQTLNGSDWTFHRDIQWD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11196.1 vs. NCBI nr
Match: gi|902227644|gb|KNA20769.1| (hypothetical protein SOVF_049370 [Spinacia oleracea]) HSP 1 Score: 536.6 bits (1381), Expect = 2.400e-149 Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 1
BLAST of Spo11196.1 vs. NCBI nr
Match: gi|731315054|ref|XP_010689718.1| (PREDICTED: GDSL esterase/lipase CPRD49 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 463.0 bits (1190), Expect = 3.400e-127 Identity = 213/256 (83.20%), Postives = 237/256 (92.58%), Query Frame = 1
BLAST of Spo11196.1 vs. NCBI nr
Match: gi|695025531|ref|XP_009400020.1| (PREDICTED: GDSL esterase/lipase CPRD49 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 433.7 bits (1114), Expect = 2.200e-118 Identity = 201/256 (78.52%), Postives = 229/256 (89.45%), Query Frame = 1
BLAST of Spo11196.1 vs. NCBI nr
Match: gi|659126541|ref|XP_008463235.1| (PREDICTED: GDSL esterase/lipase CPRD49 [Cucumis melo]) HSP 1 Score: 425.2 bits (1092), Expect = 7.800e-116 Identity = 190/256 (74.22%), Postives = 229/256 (89.45%), Query Frame = 1
BLAST of Spo11196.1 vs. NCBI nr
Match: gi|460390654|ref|XP_004240943.1| (PREDICTED: GDSL esterase/lipase CPRD49-like isoform X1 [Solanum lycopersicum]) HSP 1 Score: 424.1 bits (1089), Expect = 1.700e-115 Identity = 195/256 (76.17%), Postives = 224/256 (87.50%), Query Frame = 1
BLAST of Spo11196.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPF2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_049370 PE=4 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 1.700e-149 Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 1
BLAST of Spo11196.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CX79_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g023820 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 2.400e-127 Identity = 213/256 (83.20%), Postives = 237/256 (92.58%), Query Frame = 1
BLAST of Spo11196.1 vs. UniProtKB/TrEMBL
Match: M0SWU6_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 1.500e-118 Identity = 201/256 (78.52%), Postives = 229/256 (89.45%), Query Frame = 1
BLAST of Spo11196.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HQS6_SOLCH (Putative GDSL esterase/lipase CPRD49-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 4.200e-116 Identity = 194/256 (75.78%), Postives = 225/256 (87.89%), Query Frame = 1
BLAST of Spo11196.1 vs. UniProtKB/TrEMBL
Match: K4C5W1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.200e-115 Identity = 195/256 (76.17%), Postives = 224/256 (87.50%), Query Frame = 1
BLAST of Spo11196.1 vs. ExPASy Swiss-Prot
Match: CPR49_ARATH (GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana GN=CPRD49 PE=2 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.100e-106 Identity = 176/256 (68.75%), Postives = 216/256 (84.38%), Query Frame = 1
BLAST of Spo11196.1 vs. ExPASy Swiss-Prot
Match: GDL46_ARATH (GDSL esterase/lipase At2g38180 OS=Arabidopsis thaliana GN=At2g38180 PE=2 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 1.800e-83 Identity = 146/227 (64.32%), Postives = 182/227 (80.18%), Query Frame = 1
BLAST of Spo11196.1 vs. ExPASy Swiss-Prot
Match: GDL88_ARATH (GDSL esterase/lipase At5g62930 OS=Arabidopsis thaliana GN=At5g62930 PE=2 SV=3) HSP 1 Score: 167.9 bits (424), Expect = 1.400e-40 Identity = 89/238 (37.39%), Postives = 140/238 (58.82%), Query Frame = 1
BLAST of Spo11196.1 vs. ExPASy Swiss-Prot
Match: GDL84_ARATH (GDSL esterase/lipase At5g45920 OS=Arabidopsis thaliana GN=At5g45920 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 5.900e-39 Identity = 85/211 (40.28%), Postives = 129/211 (61.14%), Query Frame = 1
BLAST of Spo11196.1 vs. ExPASy Swiss-Prot
Match: IAH1_RAT (Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus GN=Iah1 PE=2 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 8.900e-27 Identity = 69/220 (31.36%), Postives = 121/220 (55.00%), Query Frame = 1
BLAST of Spo11196.1 vs. TAIR (Arabidopsis)
Match: AT3G11210.1 (SGNH hydrolase-type esterase superfamily protein) HSP 1 Score: 387.5 bits (994), Expect = 6.400e-108 Identity = 176/256 (68.75%), Postives = 216/256 (84.38%), Query Frame = 1
BLAST of Spo11196.1 vs. TAIR (Arabidopsis)
Match: AT2G38180.1 (SGNH hydrolase-type esterase superfamily protein) HSP 1 Score: 310.5 bits (794), Expect = 9.900e-85 Identity = 146/227 (64.32%), Postives = 182/227 (80.18%), Query Frame = 1
BLAST of Spo11196.1 vs. TAIR (Arabidopsis)
Match: AT5G62930.1 (SGNH hydrolase-type esterase superfamily protein) HSP 1 Score: 167.9 bits (424), Expect = 8.000e-42 Identity = 89/238 (37.39%), Postives = 140/238 (58.82%), Query Frame = 1
BLAST of Spo11196.1 vs. TAIR (Arabidopsis)
Match: AT5G45920.1 (SGNH hydrolase-type esterase superfamily protein) HSP 1 Score: 162.5 bits (410), Expect = 3.300e-40 Identity = 85/211 (40.28%), Postives = 129/211 (61.14%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11196.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo11196.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo11196.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo11196.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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