Spo11241 (gene) | SpinachBase

Overview


Name	Spo11241
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	ATP-binding ABC transporter
Location	chr3 : 49556011 .. 49558794 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTTTCCTAGTATTTCCACTTTCAGAAAAACATATGCAAAAACGGCATATTTACGAAATATTAACTATATACAAGTACTTATTTTTACTTAGACGGGGACATCAATTTTATGGAAAAAAAGTCACATGATGAATTAAAAATAAACCAATGAGAAGCTAAGTTTTCATGAGTAACTAGAGTGACCAAGATCTTAAACCGTTAAGAGTTCCTCAAATGAATTTGCCCATCCTCCTGCGCGCCTCACCACCTGTTCTTCCTCCTCTCAACTGTACCACGTCTATTACCAGGTTCCCACTTTTCTCTCTCTAAAATCTTTCTGTTTCACCTTGGCATTTCGTCGAACACTTTGTGTGCACTCATTGATTACTCGTATCCTATGTTTTCTGTTTGATACTACTGCTTCTGATTTGTGATGGGTGTTTGTTTAAAATTATTTGAGTTACAGAAACGCGAGTACTGAACAGTACGCAATATGGGGCCAGAACTTGAACTTTTCCATCAAAACCAAGCAAGGTGGAAGCTTGCCAATCCTTAAGAATTGCTCCATTCAGATACCCTCTGGTCAATTATGGATGCTGCTTGGACCTAATGGGTGTGGAAAATCTACCCTTCTTAAGGTAAATTACCAATATTTTCTTTTTGCTGATTGTTTGCTTTGGAATCTCTTTCGCGTAGAAGCATGTTTTCTAGGTTTGTTGTTTACGGCTTTCTGGGTTCATATTTATATCATGCAATTGTGCAAGTATTGGGTGAACTGAAGCAGGGAATTTGGAAATAGCTTCTGTTATTGCAGGGGTAAGGTTGTGTACAAATGATTTGCCTTACCCCGGCCAAGGCGAGAGCGCATTGATTGGTGTTGAAACATTGGGTTAAGCTTAAGAGTATGTGTTTTTTGATTGGTTGTGTAATGGTGCAGATATTGGCTGGCCTCTTGAAAACAAATGATGGGAATGTTTATGTTAAGAAGCCAAAAAGCTTTGTATTCCAGAACCCAGATCATCAGGTCAGTTGTGGGTCTTGTGGTTGGCTGGCTTCTTCTGTATGAATAAGTGTTGTGGTTTCGTTGCTGCATTAGTTAATGACCTCTTCTTCGCAAGTTCGCCATTTGTTTTGTGATCTTATATGTTAGAGTACTTGAGTTGGCTAATCTAATTCTGAAGAATCATAACTATGATACAAGGGAAAGTATTCATGTCTGGTCTTAACTGAAATATGTTACATTTACTTGAATTCCCTGGATTTACATACACATCTGAAATCTGATACTTGTCCTGGAGGTCTAGTAAACACGATTGTTTAGAATTTTGATTGTAAAGAGAAATATCAATTATCTGCTATATGTGATGAGAAAATCAGATGGTGGTTTGGAGAATGAATGCATTTGAAATTTTTATGAATATGCTCGAAAATAATGTATGTGAAGAAGAAATCTGTGTTGATACTGCATAGTTCTCTCTTATGTTGTGGATGCATGCAAGAATATGAATTTACTGAATATTGAGCGTTTGATGATTTTCTAAACTAACTGTTTGAGTTATATCAAAACCAGGAAATTTGGAAGCATATTCCATAAAATTATAAACCATTTTCTAGCCAGCTAGAACAGTTTACATGTCTATTTCCGTGTAATGTTGAATCATCTTGTCTATTTCGTGTAATGGTGGATCATCTTTGACAGGTAGTGATGCCTACTGTGGAAGCTGATGTTGCATTTGGTCTCGGTAAATTTGATTTGACCTATGACGAAGTTAAATCAAGGGTTGCGAAAGCTTTGGATGCTGTGGGCATGTCTGAGTATTCACAAGTAGGTTTCTAACCTATAATTTACTTTACTGTCAAATTATATGCTTAAACTTCAAGGCTAATGCTTAATACAAATGTTAATTGGAATTTTGCTAGAGGCCAGTTCAAACTCTCAGTGGTGGACAGAAACAGAGGGTAGCAATTGCAGGTGCACTAGCCGAAGCATGTAAAGTACTGTTGTTGGACGAGCTCACAACATTTCTGGATGAAAGTGATCAGGTATTACATTTTCAAGGGATCTTTTGTATTTTCAGAAAGGATGAATTTTTTTTTCCCACCCTACGAAATAGAAATTGCATTTTACCACCTAAAGATAAAACAAAAATGGTCTCTTTCCACCTATTTAACAACAAAGATCACAGAAACGTTATGTTATGAATCCTAAATTTTCTGTCCAATTTTGGGGGTTAATTTTAGTCATTGAATCATATATTCAGCAAATCAATTAACATATATGACCTTACCGAATCAATTACACACAAATTGGTTTACAAACTTAATTAACGCATCGTTTCAATGACTGATTAACAGTTACTGATATTATTTTTGACGCAAATTATAAATCATTGATTGGTGAATCACCTAATTGTAGATTGGAGTCGTAAAAGCAGTGAAGAATTCCCTGACAAGCTCCGGAGAAGTAACAGCATTGTGGGTAACTCATCGTTTAGAAGAACTCGAATATGCAGATGGTGCAATTTATATGGAGGACGGGAGAGTGGTGATGCATGGCGATCCTTCTTCAATCTTGGATTTTATTAACAGACAGCAAGCCTTGTATATTAATCAAATTAATTCCTGATTGTTTTATGTTTCATATTGTTGTAGACTTTGCAACAATATCAATTGTTTCTACAATCTGTCAAATATCTACTGCACTTTTCTGATGGTGTTACTTTACACATGTATTGCACATAGTCTGTTGAGAACAAGAACATTATTATTCGTGCCATAAATCGACAATAGATTCATATAAATA

mRNA sequence

TTGTTTTCCTAGTATTTCCACTTTCAGAAAAACATATGCAAAAACGGCATATTTACGAAATATTAACTATATACAAGTACTTATTTTTACTTAGACGGGGACATCAATTTTATGGAAAAAAAGTCACATGATGAATTAAAAATAAACCAATGAGAAGCTAAGTTTTCATGAGTAACTAGAGTGACCAAGATCTTAAACCGTTAAGAGTTCCTCAAATGAATTTGCCCATCCTCCTGCGCGCCTCACCACCTGTTCTTCCTCCTCTCAACTGTACCACGTCTATTACCAGAAACGCGAGTACTGAACAGTACGCAATATGGGGCCAGAACTTGAACTTTTCCATCAAAACCAAGCAAGGTGGAAGCTTGCCAATCCTTAAGAATTGCTCCATTCAGATACCCTCTGGTCAATTATGGATGCTGCTTGGACCTAATGGGTGTGGAAAATCTACCCTTCTTAAGATATTGGCTGGCCTCTTGAAAACAAATGATGGGAATGTTTATGTTAAGAAGCCAAAAAGCTTTGTATTCCAGAACCCAGATCATCAGGTAGTGATGCCTACTGTGGAAGCTGATGTTGCATTTGGTCTCGGTAAATTTGATTTGACCTATGACGAAGTTAAATCAAGGGTTGCGAAAGCTTTGGATGCTGTGGGCATGTCTGAGTATTCACAAAGGCCAGTTCAAACTCTCAGTGGTGGACAGAAACAGAGGGTAGCAATTGCAGGTGCACTAGCCGAAGCATGTAAAGTACTGTTGTTGGACGAGCTCACAACATTTCTGGATGAAAGTGATCAGATTGGAGTCGTAAAAGCAGTGAAGAATTCCCTGACAAGCTCCGGAGAAGTAACAGCATTGTGGGTAACTCATCGTTTAGAAGAACTCGAATATGCAGATGGTGCAATTTATATGGAGGACGGGAGAGTGGTGATGCATGGCGATCCTTCTTCAATCTTGGATTTTATTAACAGACAGCAAGCCTTGTATATTAATCAAATTAATTCCTGATTGTTTTATGTTTCATATTGTTGTAGACTTTGCAACAATATCAATTGTTTCTACAATCTGTCAAATATCTACTGCACTTTTCTGATGGTGTTACTTTACACATGTATTGCACATAGTCTGTTGAGAACAAGAACATTATTATTCGTGCCATAAATCGACAATAGATTCATATAAATA

Coding sequence (CDS)

ATGAATTTGCCCATCCTCCTGCGCGCCTCACCACCTGTTCTTCCTCCTCTCAACTGTACCACGTCTATTACCAGAAACGCGAGTACTGAACAGTACGCAATATGGGGCCAGAACTTGAACTTTTCCATCAAAACCAAGCAAGGTGGAAGCTTGCCAATCCTTAAGAATTGCTCCATTCAGATACCCTCTGGTCAATTATGGATGCTGCTTGGACCTAATGGGTGTGGAAAATCTACCCTTCTTAAGATATTGGCTGGCCTCTTGAAAACAAATGATGGGAATGTTTATGTTAAGAAGCCAAAAAGCTTTGTATTCCAGAACCCAGATCATCAGGTAGTGATGCCTACTGTGGAAGCTGATGTTGCATTTGGTCTCGGTAAATTTGATTTGACCTATGACGAAGTTAAATCAAGGGTTGCGAAAGCTTTGGATGCTGTGGGCATGTCTGAGTATTCACAAAGGCCAGTTCAAACTCTCAGTGGTGGACAGAAACAGAGGGTAGCAATTGCAGGTGCACTAGCCGAAGCATGTAAAGTACTGTTGTTGGACGAGCTCACAACATTTCTGGATGAAAGTGATCAGATTGGAGTCGTAAAAGCAGTGAAGAATTCCCTGACAAGCTCCGGAGAAGTAACAGCATTGTGGGTAACTCATCGTTTAGAAGAACTCGAATATGCAGATGGTGCAATTTATATGGAGGACGGGAGAGTGGTGATGCATGGCGATCCTTCTTCAATCTTGGATTTTATTAACAGACAGCAAGCCTTGTATATTAATCAAATTAATTCCTGA

Protein sequence

MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQALYINQINS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11241.1	Spo11241.1	mRNA

Homology

[Close]

BLAST of Spo11241.1 vs. NCBI nr
Match: gi|902205552|gb|KNA15195.1| (hypothetical protein SOVF_100580 [Spinacia oleracea])

HSP 1 Score: 521.5 bits (1342), Expect = 8.300e-145
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQ 60
           MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQ
Sbjct: 1   MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQ 60

Query: 61  IPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEAD 120
           IPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEAD
Sbjct: 61  IPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEAD 120

Query: 121 VAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVL 180
           VAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVL
Sbjct: 121 VAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVL 180

Query: 181 LLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMH 240
           LLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMH
Sbjct: 181 LLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMH 240

Query: 241 GDPSSILDFINRQQALYINQINS 264
           GDPSSILDFINRQQALYINQINS
Sbjct: 241 GDPSSILDFINRQQALYINQINS 263

[Close]

BLAST of Spo11241.1 vs. NCBI nr
Match: gi|731338202|ref|XP_010680201.1| (PREDICTED: ABC transporter I family member 10, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 457.2 bits (1175), Expect = 1.900e-125
Identity = 235/265 (88.68%), Postives = 246/265 (92.83%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPLNCTTSITRNAST--EQYAIWGQNLNFSIKTKQGGSLPILKNCS 60
           MNLPILLRA+ P    L  T S TRN ST  E YAIWGQNLNFSIKTKQGGSLPILKNCS
Sbjct: 1   MNLPILLRATLPPPAALPPTVSTTRNLSTQSENYAIWGQNLNFSIKTKQGGSLPILKNCS 60

Query: 61  IQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVE 120
           IQIPSGQLWMLLGPNGCGKSTLLKILAGLLK  DG+VYVKKPKSFVFQNPDHQVVMPTVE
Sbjct: 61  IQIPSGQLWMLLGPNGCGKSTLLKILAGLLKPTDGSVYVKKPKSFVFQNPDHQVVMPTVE 120

Query: 121 ADVAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACK 180
           ADVAFGLGKFDLTY+EVKS+VAKALDAVGMSEYS+R VQTLSGGQKQRVAIAGALAE C+
Sbjct: 121 ADVAFGLGKFDLTYEEVKSKVAKALDAVGMSEYSKRQVQTLSGGQKQRVAIAGALAETCQ 180

Query: 181 VLLLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVV 240
           VLLLDELTTFLDESDQ+GV+KAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVV
Sbjct: 181 VLLLDELTTFLDESDQVGVIKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVV 240

Query: 241 MHGDPSSILDFINRQQALYINQINS 264
            +GDPS+ILDFINRQQALYI +INS
Sbjct: 241 KNGDPSAILDFINRQQALYIEKINS 265

[Close]

BLAST of Spo11241.1 vs. NCBI nr
Match: gi|261865339|gb|ACY01920.1| (hypothetical protein [Beta vulgaris])

HSP 1 Score: 438.7 bits (1127), Expect = 7.000e-120
Identity = 221/243 (90.95%), Postives = 232/243 (95.47%), Query Frame = 1


		  
Query: 23  ITRNAST--EQYAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTL 82
           +T N ST  E YAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTL
Sbjct: 116 LTLNLSTQSENYAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTL 175

Query: 83  LKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVA 142
           LKILAGLLK  DG+VYVKKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTY+EVKS+VA
Sbjct: 176 LKILAGLLKPTDGSVYVKKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYEEVKSKVA 235

Query: 143 KALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKA 202
           KALDAVGMSEYS+R VQTLSGGQKQRVAIAGALAE C+VLLLDELTTFLDESDQ+GV+KA
Sbjct: 236 KALDAVGMSEYSKRQVQTLSGGQKQRVAIAGALAETCQVLLLDELTTFLDESDQVGVIKA 295

Query: 203 VKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQALYINQ 262
           VKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVV +GDPS+ILDFINRQQALYI +
Sbjct: 296 VKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVKNGDPSAILDFINRQQALYIEK 355

Query: 263 INS 264
           INS
Sbjct: 356 INS 358

[Close]

BLAST of Spo11241.1 vs. NCBI nr
Match: gi|823252465|ref|XP_012458843.1| (PREDICTED: ABC transporter I family member 10, chloroplastic isoform X1 [Gossypium raimondii])

HSP 1 Score: 389.0 bits (998), Expect = 6.400e-105
Identity = 199/263 (75.67%), Postives = 228/263 (86.69%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQ 60
           MNL  L R S   L PL  T+S TR+ +TE  AI G+N+NFS+ T+QG  +PILK+CSI+
Sbjct: 1   MNLSTLARTSLLHLSPLRSTSS-TRDNATESVAIEGRNINFSVNTRQGRIVPILKDCSIR 60

Query: 61  IPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEAD 120
           IPSGQLWMLLGPNGCGKSTLLKILAGLL   +G +YV++PKS+VFQNPDHQVVMPTVEAD
Sbjct: 61  IPSGQLWMLLGPNGCGKSTLLKILAGLLTPTNGALYVRRPKSYVFQNPDHQVVMPTVEAD 120

Query: 121 VAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVL 180
           VAFGLG+ +LT  EV+SRV+KAL+AVGMSEY QRPVQTLSGGQKQRVAIAGALAEACKVL
Sbjct: 121 VAFGLGRLNLTNSEVRSRVSKALEAVGMSEYLQRPVQTLSGGQKQRVAIAGALAEACKVL 180

Query: 181 LLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMH 240
           LLDELTTFLDESDQ+GV+KAV+N L  SGEVTALWVTHRLEELEYADGA+YMEDGRV+MH
Sbjct: 181 LLDELTTFLDESDQMGVIKAVQNLLDISGEVTALWVTHRLEELEYADGAVYMEDGRVIMH 240

Query: 241 GDPSSILDFINRQQALYINQINS 264
           GD +SI  FI  +Q+ YIN+INS
Sbjct: 241 GDAASINKFIKAKQSSYINRINS 262

[Close]

BLAST of Spo11241.1 vs. NCBI nr
Match: gi|225431461|ref|XP_002280615.1| (PREDICTED: ABC transporter I family member 10, chloroplastic [Vitis vinifera])

HSP 1 Score: 384.8 bits (987), Expect = 1.200e-103
Identity = 197/269 (73.23%), Postives = 230/269 (85.50%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPLNCTTSITRNAS--------TEQYAIWGQNLNFSIKTKQGGSLP 60
           MN   L R+S   LP L+ +T+ TR+ S        T+  AI GQ+LN+S+ T+ G   P
Sbjct: 1   MNYSALSRSSALHLPNLH-STNPTRSVSLSIRSCIVTQNDAIEGQSLNYSVTTRLGQLTP 60

Query: 61  ILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQV 120
           ILK+CSI+IPSGQLWMLLGPNGCGKSTLLKILAGLL    G +YVKKPKSFVFQNPDHQV
Sbjct: 61  ILKDCSIRIPSGQLWMLLGPNGCGKSTLLKILAGLLNPTSGTLYVKKPKSFVFQNPDHQV 120

Query: 121 VMPTVEADVAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGA 180
           VMPTVEADVAFGLGKF+LT +EV+SRV+KALDAVG+S+Y QRPVQTLSGGQKQRVAIAGA
Sbjct: 121 VMPTVEADVAFGLGKFNLTIEEVRSRVSKALDAVGISDYMQRPVQTLSGGQKQRVAIAGA 180

Query: 181 LAEACKVLLLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYM 240
           LAEACKVLLLDELTTFLDE+DQ+GV+KAVKNS+ SSGEVTALWVTHR+EELEYADGA+YM
Sbjct: 181 LAEACKVLLLDELTTFLDENDQVGVIKAVKNSVDSSGEVTALWVTHRMEELEYADGAVYM 240

Query: 241 EDGRVVMHGDPSSILDFINRQQALYINQI 262
           EDGRVVMHG+ +SI+DF+  +Q+ Y+NQ+
Sbjct: 241 EDGRVVMHGNAASIMDFVKARQSSYLNQL 268

[Close]

BLAST of Spo11241.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6Q9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_100580 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 5.800e-145
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQ 60
           MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQ
Sbjct: 1   MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQ 60

Query: 61  IPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEAD 120
           IPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEAD
Sbjct: 61  IPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEAD 120

Query: 121 VAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVL 180
           VAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVL
Sbjct: 121 VAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVL 180

Query: 181 LLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMH 240
           LLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMH
Sbjct: 181 LLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMH 240

Query: 241 GDPSSILDFINRQQALYINQINS 264
           GDPSSILDFINRQQALYINQINS
Sbjct: 241 GDPSSILDFINRQQALYINQINS 263

[Close]

BLAST of Spo11241.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CA97_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g132560 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.300e-125
Identity = 235/265 (88.68%), Postives = 246/265 (92.83%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPLNCTTSITRNAST--EQYAIWGQNLNFSIKTKQGGSLPILKNCS 60
           MNLPILLRA+ P    L  T S TRN ST  E YAIWGQNLNFSIKTKQGGSLPILKNCS
Sbjct: 1   MNLPILLRATLPPPAALPPTVSTTRNLSTQSENYAIWGQNLNFSIKTKQGGSLPILKNCS 60

Query: 61  IQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVE 120
           IQIPSGQLWMLLGPNGCGKSTLLKILAGLLK  DG+VYVKKPKSFVFQNPDHQVVMPTVE
Sbjct: 61  IQIPSGQLWMLLGPNGCGKSTLLKILAGLLKPTDGSVYVKKPKSFVFQNPDHQVVMPTVE 120

Query: 121 ADVAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACK 180
           ADVAFGLGKFDLTY+EVKS+VAKALDAVGMSEYS+R VQTLSGGQKQRVAIAGALAE C+
Sbjct: 121 ADVAFGLGKFDLTYEEVKSKVAKALDAVGMSEYSKRQVQTLSGGQKQRVAIAGALAETCQ 180

Query: 181 VLLLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVV 240
           VLLLDELTTFLDESDQ+GV+KAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVV
Sbjct: 181 VLLLDELTTFLDESDQVGVIKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVV 240

Query: 241 MHGDPSSILDFINRQQALYINQINS 264
            +GDPS+ILDFINRQQALYI +INS
Sbjct: 241 KNGDPSAILDFINRQQALYIEKINS 265

[Close]

BLAST of Spo11241.1 vs. UniProtKB/TrEMBL
Match: E2DMY7_BETVU (Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 4.900e-120
Identity = 221/243 (90.95%), Postives = 232/243 (95.47%), Query Frame = 1


		  
Query: 23  ITRNAST--EQYAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTL 82
           +T N ST  E YAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTL
Sbjct: 116 LTLNLSTQSENYAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTL 175

Query: 83  LKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVA 142
           LKILAGLLK  DG+VYVKKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTY+EVKS+VA
Sbjct: 176 LKILAGLLKPTDGSVYVKKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYEEVKSKVA 235

Query: 143 KALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKA 202
           KALDAVGMSEYS+R VQTLSGGQKQRVAIAGALAE C+VLLLDELTTFLDESDQ+GV+KA
Sbjct: 236 KALDAVGMSEYSKRQVQTLSGGQKQRVAIAGALAETCQVLLLDELTTFLDESDQVGVIKA 295

Query: 203 VKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQALYINQ 262
           VKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVV +GDPS+ILDFINRQQALYI +
Sbjct: 296 VKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVKNGDPSAILDFINRQQALYIEK 355

Query: 263 INS 264
           INS
Sbjct: 356 INS 358

[Close]

BLAST of Spo11241.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VUW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G035000 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.500e-105
Identity = 199/263 (75.67%), Postives = 228/263 (86.69%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPLNCTTSITRNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQ 60
           MNL  L R S   L PL  T+S TR+ +TE  AI G+N+NFS+ T+QG  +PILK+CSI+
Sbjct: 1   MNLSTLARTSLLHLSPLRSTSS-TRDNATESVAIEGRNINFSVNTRQGRIVPILKDCSIR 60

Query: 61  IPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEAD 120
           IPSGQLWMLLGPNGCGKSTLLKILAGLL   +G +YV++PKS+VFQNPDHQVVMPTVEAD
Sbjct: 61  IPSGQLWMLLGPNGCGKSTLLKILAGLLTPTNGALYVRRPKSYVFQNPDHQVVMPTVEAD 120

Query: 121 VAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVL 180
           VAFGLG+ +LT  EV+SRV+KAL+AVGMSEY QRPVQTLSGGQKQRVAIAGALAEACKVL
Sbjct: 121 VAFGLGRLNLTNSEVRSRVSKALEAVGMSEYLQRPVQTLSGGQKQRVAIAGALAEACKVL 180

Query: 181 LLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMH 240
           LLDELTTFLDESDQ+GV+KAV+N L  SGEVTALWVTHRLEELEYADGA+YMEDGRV+MH
Sbjct: 181 LLDELTTFLDESDQMGVIKAVQNLLDISGEVTALWVTHRLEELEYADGAVYMEDGRVIMH 240

Query: 241 GDPSSILDFINRQQALYINQINS 264
           GD +SI  FI  +Q+ YIN+INS
Sbjct: 241 GDAASINKFIKAKQSSYINRINS 262

[Close]

BLAST of Spo11241.1 vs. UniProtKB/TrEMBL
Match: A0A097P9R3_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCI10 PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.700e-101
Identity = 188/239 (78.66%), Postives = 209/239 (87.45%), Query Frame = 1


		  
Query: 25  RNASTEQYAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTLLKIL 84
           R+  TE  AI G+NL+FS  T+QG   PILK+CS+++PSGQLWMLLGPNGCGKSTLLKIL
Sbjct: 23  RSNITENVAIEGRNLSFSFATRQGKFFPILKDCSLRVPSGQLWMLLGPNGCGKSTLLKIL 82

Query: 85  AGLLKTNDGNVYVKKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVAKALD 144
           AGLL+   G +YVK+PKSFVFQNPDHQVVMPTVEADVAFGLGKF LT DEV+ RV+KALD
Sbjct: 83  AGLLQPTSGTLYVKRPKSFVFQNPDHQVVMPTVEADVAFGLGKFILTEDEVRQRVSKALD 142

Query: 145 AVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKAVKNS 204
            VGMS Y QRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLD++DQIGV+KAVKNS
Sbjct: 143 DVGMSTYMQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDQNDQIGVIKAVKNS 202

Query: 205 LTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQALYINQINS 264
           L +S E+TALWVTHRLEELEYADGA YME+GRVV  GD SSI+DFIN +QA Y NQ NS
Sbjct: 203 LVASDEITALWVTHRLEELEYADGAFYMENGRVVKVGDGSSIMDFINARQASYFNQTNS 261

[Close]

BLAST of Spo11241.1 vs. ExPASy Swiss-Prot
Match: AB10I_ARATH (ABC transporter I family member 10, chloroplastic OS=Arabidopsis thaliana GN=ABCI10 PE=2 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.200e-96
Identity = 182/271 (67.16%), Postives = 226/271 (83.39%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPL-NCTTSITRNAS-----TEQYAIWGQNLNFSIKTKQGGSLPIL 60
           MN   L  ASPP L PL + ++S++ + S     ++  A+  +NL FS+ T+QG S+PIL
Sbjct: 1   MNGHCLFAASPPRLFPLRSISSSVSPSGSYRIKFSDNVAVECRNLCFSVSTRQGISVPIL 60

Query: 61  KNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVM 120
           ++CS +IPSGQLWM+LGPNGCGKSTLLKILAG++  + G V+V+KPK+FVFQNPDHQVVM
Sbjct: 61  RDCSFRIPSGQLWMILGPNGCGKSTLLKILAGVVNPSSGTVFVEKPKNFVFQNPDHQVVM 120

Query: 121 PTVEADVAFGLGKF-DLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGAL 180
           PTVEADVAFGLGK+ D+  +EVKSRV KAL+AVGM +Y QRP+QTLSGGQKQR+AIAGAL
Sbjct: 121 PTVEADVAFGLGKYHDMNQEEVKSRVIKALEAVGMRDYMQRPIQTLSGGQKQRIAIAGAL 180

Query: 181 AEACKVLLLDELTTFLDESDQIGVVKAVKNSLTS-SGEVTALWVTHRLEELEYADGAIYM 240
           AEACKVLLLDELTTFLDESDQ+GV+KAVK+ + +  G+VTALWVTHRLEEL+YADGA+YM
Sbjct: 181 AEACKVLLLDELTTFLDESDQMGVIKAVKDLINAKKGDVTALWVTHRLEELKYADGAVYM 240

Query: 241 EDGRVVMHGDPSSILDFINRQQALYINQINS 264
           E+GRVV HGD ++I DFI  +Q+ YI+QI S
Sbjct: 241 ENGRVVRHGDAATISDFIKAKQSSYIDQIGS 271

[Close]

BLAST of Spo11241.1 vs. ExPASy Swiss-Prot
Match: ECFA1_CALS4 (Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=ecfA1 PE=3 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.500e-37
Identity = 93/229 (40.61%), Postives = 126/229 (55.02%), Query Frame = 1


		  
Query: 32  YAIWGQNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTN 91
           + I  QN++F     +  S P+LK+ ++Q   GQ   ++G NG GKSTL K    LL   
Sbjct: 3   FIIRAQNVSFCYSEGESKSPPVLKDINLQFEKGQFIGIIGHNGSGKSTLAKHFNALLLPT 62

Query: 92  DGNVYVK--------------KPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKS 151
            GNVYVK              +    VFQNPD+Q+V   VE DVAFG     +  +E++ 
Sbjct: 63  KGNVYVKDMDTKDAKHLWDIRQTAGLVFQNPDNQIVAAIVEEDVAFGPENLGIPPEEIRK 122

Query: 152 RVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGV 211
           RV  AL AVGM EY   P   LSGGQKQRVAIAG +A   + ++LDE T  LD   +  V
Sbjct: 123 RVEYALKAVGMWEYKDFPPHMLSGGQKQRVAIAGIIAMKPECIVLDEPTAMLDPIGRREV 182

Query: 212 VKAVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSI 247
           +  +K  L     +T + +TH +EE+  AD  I M+DG+VV+ G P  +
Sbjct: 183 ISTIK-KLNKEEGITVILITHFMEEVVDADRVIVMDDGKVVLDGTPKEV 230

[Close]

BLAST of Spo11241.1 vs. ExPASy Swiss-Prot
Match: ECFA1_LACS1 (Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Lactobacillus salivarius (strain UCC118) GN=ecfA1 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.800e-36
Identity = 90/219 (41.10%), Postives = 128/219 (58.45%), Query Frame = 1


		  
Query: 53  ILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYV-------------KK 112
           ILKN ++ I  GQ   L+G NG GKSTL +++ GLLK   G++ V             +K
Sbjct: 25  ILKNLTLNIKDGQWIALIGHNGSGKSTLARLIDGLLKAESGSIKVDGYEMNEKNIWDIRK 84

Query: 113 PKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQTL 172
               VFQNPD+Q V   VE+D+AFGL    +  +E+ SRVA AL  VGM +++      L
Sbjct: 85  KIGMVFQNPDNQFVGADVESDIAFGLENQGVPREEMVSRVADALKVVGMEKFATHEPARL 144

Query: 173 SGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTHR 232
           SGGQKQRVAIAG LA   K+++LDE T+ LD   + G++  +K+ L    + T + +TH 
Sbjct: 145 SGGQKQRVAIAGVLALRPKIIILDEATSMLDPEGRKGLITLIKD-LKDEYKFTVISITHD 204

Query: 233 LEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQALYI 259
           ++E   AD  I ++DG+++  G P SI  FI   + L I
Sbjct: 205 IDEATLADRVIVLDDGKIIDDGKPESI--FIKNDELLNI 240

[Close]

BLAST of Spo11241.1 vs. ExPASy Swiss-Prot
Match: ECFA1_STRPB (Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=ecfA1 PE=3 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 1.300e-33
Identity = 78/208 (37.50%), Postives = 121/208 (58.17%), Query Frame = 1


		  
Query: 52  PILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYV-------------K 111
           P L   S  +  G+   ++G NG GKST ++++ GLL+   G+V V             +
Sbjct: 21  PTLDGVSFHVKQGEWLSIIGHNGSGKSTTIRLIDGLLEPESGSVIVDGDLLTITNVWEIR 80

Query: 112 KPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQT 171
                VFQNPD+Q V  TVE DVAFGL    + ++++K RV  AL+ VGM  + ++    
Sbjct: 81  HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPAR 140

Query: 172 LSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKAVKNSLTSSGEVTALWVTH 231
           LSGGQKQRVAIAGA+A   K+++LDE T+ LD   ++ ++K +KN +    ++T + +TH
Sbjct: 141 LSGGQKQRVAIAGAVAMKPKIIILDEATSMLDPKGRLELIKTIKN-IRDDYQLTVISITH 200

Query: 232 RLEELEYADGAIYMEDGRVVMHGDPSSI 247
            L+E+  +D  + M+DG+V     P  +
Sbjct: 201 DLDEVALSDRVLVMKDGQVESTSTPEQL 227

[Close]

BLAST of Spo11241.1 vs. ExPASy Swiss-Prot
Match: ECFA1_SYMTH (Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Symbiobacterium thermophilum (strain T / IAM 14863) GN=ecfA1 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.300e-33
Identity = 92/228 (40.35%), Postives = 125/228 (54.82%), Query Frame = 1


		  
Query: 49  GSLPI---LKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYV-------- 108
           G+ P+   L    + +  G+   +LG NG GKSTL + L  LL    G V V        
Sbjct: 22  GAAPVRLALDGVDLDVRRGEFLAILGMNGSGKSTLARHLNALLLPRAGRVLVDGLDTREE 81

Query: 109 ------KKPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVAKALDAVGMSEY 168
                 +     VFQNPD+Q+V   VE DVAFG     L   E+++RVA+AL+AVGMSE+
Sbjct: 82  ANLWSIRDRVGMVFQNPDNQIVAAVVEEDVAFGPENQGLPSAEIRARVAEALEAVGMSEH 141

Query: 169 SQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKAVKNSLTSSGEV 228
            +R    LSGGQKQRVAIAGALA     L+LDE T  LD S +  V+  V+      G +
Sbjct: 142 RERSPHLLSGGQKQRVAIAGALAMRPACLVLDEPTAMLDPSGRAEVLAVVRRLNRELG-M 201

Query: 229 TALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQALYIN 260
           T +W+TH ++E   AD  + M +GRV M G P  +    +R +AL ++
Sbjct: 202 TVVWITHFMDEAVVADRVVVMAEGRVQMVGTPREVFAQADRIRALRLD 248

[Close]

BLAST of Spo11241.1 vs. TAIR (Arabidopsis)
Match: AT4G33460.1 (ABC transporter family protein)

HSP 1 Score: 352.8 bits (904), Expect = 1.800e-97
Identity = 182/271 (67.16%), Postives = 226/271 (83.39%), Query Frame = 1


		  
Query: 1   MNLPILLRASPPVLPPL-NCTTSITRNAS-----TEQYAIWGQNLNFSIKTKQGGSLPIL 60
           MN   L  ASPP L PL + ++S++ + S     ++  A+  +NL FS+ T+QG S+PIL
Sbjct: 1   MNGHCLFAASPPRLFPLRSISSSVSPSGSYRIKFSDNVAVECRNLCFSVSTRQGISVPIL 60

Query: 61  KNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVYVKKPKSFVFQNPDHQVVM 120
           ++CS +IPSGQLWM+LGPNGCGKSTLLKILAG++  + G V+V+KPK+FVFQNPDHQVVM
Sbjct: 61  RDCSFRIPSGQLWMILGPNGCGKSTLLKILAGVVNPSSGTVFVEKPKNFVFQNPDHQVVM 120

Query: 121 PTVEADVAFGLGKF-DLTYDEVKSRVAKALDAVGMSEYSQRPVQTLSGGQKQRVAIAGAL 180
           PTVEADVAFGLGK+ D+  +EVKSRV KAL+AVGM +Y QRP+QTLSGGQKQR+AIAGAL
Sbjct: 121 PTVEADVAFGLGKYHDMNQEEVKSRVIKALEAVGMRDYMQRPIQTLSGGQKQRIAIAGAL 180

Query: 181 AEACKVLLLDELTTFLDESDQIGVVKAVKNSLTS-SGEVTALWVTHRLEELEYADGAIYM 240
           AEACKVLLLDELTTFLDESDQ+GV+KAVK+ + +  G+VTALWVTHRLEEL+YADGA+YM
Sbjct: 181 AEACKVLLLDELTTFLDESDQMGVIKAVKDLINAKKGDVTALWVTHRLEELKYADGAVYM 240

Query: 241 EDGRVVMHGDPSSILDFINRQQALYINQINS 264
           E+GRVV HGD ++I DFI  +Q+ YI+QI S
Sbjct: 241 ENGRVVRHGDAATISDFIKAKQSSYIDQIGS 271

[Close]

BLAST of Spo11241.1 vs. TAIR (Arabidopsis)
Match: AT3G28390.1 (P-glycoprotein 18)

HSP 1 Score: 82.4 bits (202), Expect = 4.500e-16
Identity = 67/224 (29.91%), Postives = 113/224 (50.45%), Query Frame = 1


		  
Query: 52  PILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNV-------------YVK 111
           PI  +  +++PSG+   L+G +G GKST++ +L        G +             +++
Sbjct: 363 PIFDDLCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPIAGEILIDGLPINKLQVKWLR 422

Query: 112 KPKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVAKALDAVGM---------S 171
                V Q P   +   +++ ++ FG  K D + DEV    AKA +A            +
Sbjct: 423 SQMGLVSQEP--VLFATSIKENILFG--KEDASMDEVVE-AAKASNAHSFISQFPNSYQT 482

Query: 172 EYSQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKAVKNSLTSSG 231
           +  +R VQ LSGGQKQR+AIA A+ ++  +LLLDE T+ LD   +  V +A+ N+  S G
Sbjct: 483 QVGERGVQ-LSGGQKQRIAIARAIIKSPIILLLDEATSALDSESERVVQEALDNA--SIG 542

Query: 232 EVTALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQ 254
             T + + HRL  +  AD    + +GR++  G    +L+ ++ Q
Sbjct: 543 RTTIV-IAHRLSTIRNADVICVVHNGRIIETGSHEELLEKLDGQ 577

[Close]

BLAST of Spo11241.1 vs. TAIR (Arabidopsis)
Match: AT3G28360.1 (P-glycoprotein 16)

HSP 1 Score: 82.0 bits (201), Expect = 5.900e-16
Identity = 66/225 (29.33%), Postives = 111/225 (49.33%), Query Frame = 1


		  
Query: 53  ILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNV-------------YVKK 112
           I  +  ++IPSG+   L+G +G GKST++ +L      N+G++             +++ 
Sbjct: 363 IFDDLCLKIPSGKTVALVGGSGSGKSTVISLLQRFYDPNEGDILIDSVSINNMQVKWLRS 422

Query: 113 PKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVAKALDAVGMSEYSQRPVQT- 172
               V Q P   +   +++ ++ FG  K D ++DEV    AKA +A           QT 
Sbjct: 423 QMGMVSQEPS--LFATSIKENILFG--KEDASFDEVVE-AAKASNAHNFISQFPHGYQTQ 482

Query: 173 -------LSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKAVKNSLTSSGEV 232
                  +SGGQKQR+AIA AL ++  +LLLDE T+ LD   +  V +A+ N+  S G  
Sbjct: 483 VGERGVHMSGGQKQRIAIARALIKSPIILLLDEATSALDLESERVVQEALDNA--SVGRT 542

Query: 233 TALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQAL 257
           T + + HRL  +  AD    + +G +V  G    +++   +  +L
Sbjct: 543 TIV-IAHRLSTIRNADIICVLHNGCIVETGSHDKLMEIDGKYTSL 579

[Close]

BLAST of Spo11241.1 vs. TAIR (Arabidopsis)
Match: AT2G36910.1 (ATP binding cassette subfamily B1)

HSP 1 Score: 81.3 bits (199), Expect = 1.000e-15
Identity = 65/242 (26.86%), Postives = 122/242 (50.41%), Query Frame = 1


		  
Query: 37   QNLNFSIKTKQGGSLPILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNVY 96
            ++++FS  ++    + I ++ S++  +G+   L+GP+GCGKS+++ ++    + + G V 
Sbjct: 1027 KHIDFSYPSRP--DIQIFRDLSLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSGRVM 1086

Query: 97   V--KKPKSFVFQN-PDHQVVMP--------TVEADVAFG---LGKFDLTYDEVKSRVAKA 156
            +  K  + +  +    H  ++P        T+  ++A+G     + ++      +   K 
Sbjct: 1087 IDGKDIRKYNLKAIRKHIAIVPQEPCLFGTTIYENIAYGHECATEAEIIQAATLASAHKF 1146

Query: 157  LDAV--GMSEY-SQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVK 216
            + A+  G   Y  +R VQ LSGGQKQR+AIA AL    +++LLDE T+ LD   +  V +
Sbjct: 1147 ISALPEGYKTYVGERGVQ-LSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQE 1206

Query: 217  AVKNSLTSSGEVTALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQALYIN 262
            A+  + +     T++ V HRL  +  A     ++DG+V   G  S +L   N    +Y  
Sbjct: 1207 ALDQACSGR---TSIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLK--NHPDGIYAR 1260

[Close]

BLAST of Spo11241.1 vs. TAIR (Arabidopsis)
Match: AT3G28345.1 (ABC transporter family protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.000e-15
Identity = 66/229 (28.82%), Postives = 116/229 (50.66%), Query Frame = 1


		  
Query: 53  ILKNCSIQIPSGQLWMLLGPNGCGKSTLLKILAGLLKTNDGNV-------------YVKK 112
           I  +  +++PSG+   L+G +G GKST++ +L        G +             +++ 
Sbjct: 376 IFDDFCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPLAGEILIDGVSIDKLQVKWLRS 435

Query: 113 PKSFVFQNPDHQVVMPTVEADVAFGLGKFDLTYDEVKSRVAKALDAVGM---------SE 172
               V Q P   +   T++ ++ FG  K D + D+V    AKA +A            ++
Sbjct: 436 QMGLVSQEP--ALFATTIKENILFG--KEDASMDDVVE-AAKASNAHNFISQLPNGYETQ 495

Query: 173 YSQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQIGVVKAVKNSLTSSGE 232
             +R VQ +SGGQKQR+AIA A+ ++  +LLLDE T+ LD   +  V +A++N+  S G 
Sbjct: 496 VGERGVQ-MSGGQKQRIAIARAIIKSPTILLLDEATSALDSESERVVQEALENA--SIGR 555

Query: 233 VTALWVTHRLEELEYADGAIYMEDGRVVMHGDPSSILDFINRQQALYIN 260
            T L + HRL  +  AD    +++G +V  G    +++ I+ Q +  ++
Sbjct: 556 TTIL-IAHRLSTIRNADVISVVKNGHIVETGSHDELMENIDGQYSTLVH 595

The following BLAST results are available for this feature:

BLAST of Spo11241.1 vs. NCBI nr
BLAST of Spo11241.1 vs. UniProtKB/TrEMBL
BLAST of Spo11241.1 vs. ExPASy Swiss-Prot
BLAST of Spo11241.1 vs. TAIR (Arabidopsis)

BLAST of Spo11241.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902205552\|gb\|KNA15195.1\|	8.3e-145	100.	hypothetical protein SOVF_1005...	[more]
gi\|731338202\|ref\|XP_010680201.1\|	1.9e-125	88.6	PREDICTED: ABC transporter I f...	[more]
gi\|261865339\|gb\|ACY01920.1\|	7.0e-120	90.9	hypothetical protein [Beta vul...	[more]
gi\|823252465\|ref\|XP_012458843.1\|	6.4e-105	75.6	PREDICTED: ABC transporter I f...	[more]
gi\|225431461\|ref\|XP_002280615.1\|	1.2e-103	73.2	PREDICTED: ABC transporter I f...	[more]

BLAST of Spo11241.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R6Q9_SPIOL	5.8e-145	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CA97_BETVU	1.3e-125	88.6	Uncharacterized protein OS=Bet...	[more]
E2DMY7_BETVU	4.9e-120	90.9	Putative uncharacterized prote...	[more]
A0A0D2VUW5_GOSRA	4.5e-105	75.6	Uncharacterized protein OS=Gos...	[more]
A0A097P9R3_HEVBR	6.7e-101	78.6	ABC transporter family protein...	[more]

BLAST of Spo11241.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
AB10I_ARATH	3.2e-96	67.1	ABC transporter I family membe...	[more]
ECFA1_CALS4	1.5e-37	40.6	Energy-coupling factor transpo...	[more]
ECFA1_LACS1	4.8e-36	41.1	Energy-coupling factor transpo...	[more]
ECFA1_STRPB	1.3e-33	37.5	Energy-coupling factor transpo...	[more]
ECFA1_SYMTH	1.3e-33	40.3	Energy-coupling factor transpo...	[more]

BLAST of Spo11241.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G33460.1	1.8e-97	67.1	ABC transporter family protein	[more]
AT3G28390.1	4.5e-16	29.9	P-glycoprotein 18	[more]
AT3G28360.1	5.9e-16	29.3	P-glycoprotein 16	[more]
AT2G36910.1	1.0e-15	26.8	ATP binding cassette subfamily...	[more]
AT3G28345.1	1.0e-15	28.8	ABC transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 54..186 score: 1.2
IPR003439	ABC transporter-like	PROFILE	PS50893	ABC_TRANSPORTER_2	coord: 34..259 score: 20
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 63..236 score: 6.2
IPR017871	ABC transporter, conserved site	PROSITE	PS00211	ABC_TRANSPORTER_1	coord: 159..173 scor
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 38..259 score: 7.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 31..254 score: 9.86
None	No IPR available	PANTHER	PTHR24220	FAMILY NOT NAMED	coord: 35..247 score: 2.7
None	No IPR available	PANTHER	PTHR24220:SF218	ABC TRANSPORTER I FAMILY MEMBER 10, CHLOROPLASTIC	coord: 35..247 score: 2.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006547	histidine metabolic process
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0045727	positive regulation of translation
biological_process	GO:0031425	chloroplast RNA processing
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006427	histidyl-tRNA aminoacylation
biological_process	GO:0006412	translation
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016020	membrane
cellular_component	GO:0019013	viral nucleocapsid
molecular_function	GO:0004821	histidine-tRNA ligase activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005524	ATP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19459	0.75	Barchart \| Table
Spo18103	0.73	Barchart \| Table
Spo22592	0.68	Barchart \| Table
Spo01695	0.67	Barchart \| Table
Spo16842	0.67	Barchart \| Table
Spo27346	0.66	Barchart \| Table
Spo07114	0.66	Barchart \| Table
Spo12726	0.66	Barchart \| Table
Spo16224	0.66	Barchart \| Table
Spo26958	0.66	Barchart \| Table
Spo00579	0.66	Barchart \| Table
Spo10473	0.65	Barchart \| Table
Spo27210	0.65	Barchart \| Table
Spo11768	0.65	Barchart \| Table
Spo22326	0.65	Barchart \| Table