Spo11297 (gene)

Overview
NameSpo11297
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMyb/SANT-like DNA-binding domain protein
Locationchr4 : 58910535 .. 58913925 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATGGAAGGTGATCGAAGTAGAGTTCACTAAAAGAACGAGGTTGACATATGACAAGAACAAACTGAAAAACAAATGGGATTGGATGAGAAATCGATGGAGTCTTTGGAGAGCACTTAAAGGAAAAGAAACCGGATTAGGTTGGGATCATGAGAAGGGAACAATAAGTCCTAGTGACGAATGGTGGAAGAACAAAATTGAGGTTAGCTATTTTATATCACGTTTAATAACTCGCGTAGAAAATTAAACACAAAAGGTTGATTGCAAGCTAATTTTTTTTTCTTTCTTTATAGGAAAATATGCATTTTAAAGCTTTTCAATTTGAAGGTATTGAGCCTGAACTTGAATACAAGATGGAACAACTATTTGGAGTTTCAGTTGCTCAAGGGGGGCTTAAGTATACTCCTGTTCAACGCTCAAATCAAGCACCCCCTTCTGTTTTTTATATCCCTCTTCCACCCCTTGGTGCTGGTAATCTTAATCATGGTGGAAATTCTAGTAATATACCACCTGAGTATGATGATCAAATGAGTGAGAATGGTGGTATTATTCATACCCAAACTAACATGGATTGGCAGGATACTTTTCATGATTCTACTCCAAATCCTTCCCCATCTCCTTCTCCTCCTCCACAATCAACCGAACTCGGAGCTAGAGGAAGTAAAAGAAGTTCTGAAAATGATATTGCAGAGAGCTCGAAACGTTGTAGGATAGAATCTGGTAGTAGGAAAGGAGGGGCTGCACTGTTGATGGAAAAGCTAGATACAATGGTGAAAGTTGTTACTGAGAGGAACATCAAGGATATGGAATTGATGAGCCTTGAAGCACATACACTCAATGACTCATCTAATACACTTGCTGATTCGTTGGCAAAGTTGGTGTCCATGAAAGACTTAACTCCCGGTAGCCTGAATTTTGTTTTGCTTGCACCATGATTGAATATCCCCAAAAGAGGATACTTCTCAATGGAATGCCAGATGACAACACAAGGCTTCAATGGATCAAATACTTGTTTGAGAAGAGTGGGTGACCAATGAACTAACTTTAGTTTAGTATTAATACTATCTAGGTTTATTATCGGATCTAATATGTACGGGTAGTATCTAGATTACAACTCTTAGTTAGTATTATCTTTTGGATGAAACTTTTAATTGGTTTTACTATTGTGATGTAAGGCATCACTATGCATGTTGTTTCAGGTTTTGCAATTTTGTTATGTATATGCAACCTGATAACATTGATATTTTGTTTAAACTATAAATTCAATATGAATGTATGCTAATGCTTGTGACATATATTTGTGTTTTGTGTTTCTTTAATATAATTTGATGGAATGATATTGTATTGGATATACTTGTAGGTATGGATTTGTGTGCTATACGCAATAGAATACGAAAGAGGTATAAAAATAGCGCATTTTGGGACTCTGTGGCATGTGGACTAGGTTATACTTCTATTTACTATGTAAAGTACATTTACAAAGTACCATGCATGACTTCATTTCAAACAGGAGAAAAATGGATGCATGAAATGTTAACTGGTCATGAAAAACGTTGTTTTAACATGTTTAGAATGACATAATGTACATTTCGACAACTATGCATGGATTTAGAAAGTAAGTATGGGTTGATACCTTCGGAAAGAATATCAATTTTGGAAAAAGTGGGGTTATTTGTCTACATTCTTAGTAAGGCACAGTCAAATCGGGATGCTCAAGAGAGATTTCAACACTCGGGTGAAACTGTAAGCAGAATTTTCAAAGAAGTTTTGGATGCCATGGATGGTTTATCAAGAGATATTCTAAGGCCAAGAGATCCCGAGTTCAAGGAAATCCCTTCACAAATTGTGGATGATACTCGATATATGCCTCATTTTAAGGTAATTATTTGTACATTTATTGTTTTTGATATCTTATTTAAATGTTATATTAATTTGATCGTATTCGGAATGCATTGGAGCCATTGATGGCACTCATATAGATGTTATAATTGCCGAAGAGGATCAATTCCGATATAGAGGAAGGAAAGGAACACCTACCCTTAATGTTATGGCCGCATGTGACTTTGATTTGCTTTTTACTTACGTGCTAACCGGTTGGGAGGGGTCGGCTCATGACTCTCGTATCTTTCTTGATACTCTTGGCAATCCAAGTCTTAACTTTCCAAAACCTCCTCCTGGTAATTTGCATCATTCATTTCATTTACTGGTTTTGATATTTTTATTAATGCATTTTAATTATATACGGGTTCTTTCATGATAGGAAAATATTACTTGGTGGATAAAGGGTATCCGGAAAGAGAAGGGTATTTGACTCCCTACCACAAGATAAGGTATCATCAATCCGAATTTCGCGGGGCAATTCCAAGAGGGCCTCGGGAAATTTTCAATCGTGCCCATTCTTCCTTAAGGAGTTGCATTGAGAGGTCATTTGGAATTTTGAAGGCACGGTGGAAAATATTAAGAAGTATGCCAAAATATTCATTACAAGATCAAAATAGAATAGTTTGTGCTTGTTTTGCATTGCACAACTACATAAGATTAAGCAAAGTTCCTGATCCAGGATTCAAGATCATAGATGACGACCCCACTTTTATTCCTCCTGAAGTATCTATGGATGTCGAGTGTGGTTCTACACAGGAAGTTCAACGTGTGAGTACTAATGAAATGACAAAAATTCGAGAGGAAATTACTACTAGTTTGATGAGAAGTAGACGACGACGACGTCGCTCTTCTTAAACATGTGTTGCTTGTTAGAATAAATGTTTAGTAGTGTTAGAATAATGTTGTTGTAATAGGATTTTCCATGGACTACTTTTCATTGTTATGCATTGATCAAAATGTTTAATTTTTACGATGTCATATATGTACGTTACTATTTCCAATTCTTTCAACAATTTGTTAAACAAATCAGTGTTTAGAGCATAAAAGATTATTCATAAACATAAAATATATTTGGAATTAGAAACTCATCATTAATGACACAACTAAATAAATAACTTAACTATTGAGAAATAAAGTAAATGACACAAAAGAGCAATGTCCATAAATGTCTTTTTACACAACTAAATAGCTAACAGCTTTTAGCAATCAGCTAAGTGTTACCAAACACATTCATATAAACAGTTAGTCAAATCAACAGTCAAATCTGCTAAATAAAAAGTGAATCAGCTAACTGCTAATGCAAACCGTAAACGGCTAAATAAAAAGTGAATCATTTGGATGTTAGTTACCAAACAGGGCCATTCTCTTTCCTAGAATGCTTCCCTTCTTCCACTGATCTAAAGTCCCTGCTTCTCTCCTTCTTCTATGTCTCCTCCACCGCTATAAGGTTCCTTTTTCTCTCCTCCAAACTCTGTCAACGGTACACCTCCCTCTTCCCAAAACCCTAA

mRNA sequence

ATGCCATGGAAGGTGATCGAAGTAGAGTTCACTAAAAGAACGAGGTTGACATATGACAAGAACAAACTGAAAAACAAATGGGATTGGATGAGAAATCGATGGAGTCTTTGGAGAGCACTTAAAGGAAAAGAAACCGGATTAGGTTGGGATCATGAGAAGGGAACAATAAGTCCTAGTGACGAATGGTGGAAGAACAAAATTGAGGAAAATATGCATTTTAAAGCTTTTCAATTTGAAGGTATTGAGCCTGAACTTGAATACAAGATGGAACAACTATTTGGAGTTTCAGTTGCTCAAGGGGGGCTTAAGTATACTCCTGTTCAACGCTCAAATCAAGCACCCCCTTCTGTTTTTTATATCCCTCTTCCACCCCTTGGTGCTGGTAATCTTAATCATGGTGGAAATTCTAGTAATATACCACCTGAGTATGATGATCAAATGAGTGAGAATGGTGGTATTATTCATACCCAAACTAACATGGATTGGCAGGATACTTTTCATGATTCTACTCCAAATCCTTCCCCATCTCCTTCTCCTCCTCCACAATCAACCGAACTCGGAGCTAGAGGAAGTAAAAGAAGTTCTGAAAATGATATTGCAGAGAGCTCGAAACGTTGTAGGATAGAATCTGGTAGTAGGAAAGGAGGGGCTGCACTGTTGATGGAAAAGCTAGATACAATGGTGAAAGTTGTTACTGAGAGGAACATCAAGGATATGGAATTGATGAGCCTTGAAGCACATACACTCAATGACTCATCTAATACACTTGCTGATTCGTTGGCAAAGTTGGTGTCCATGAAAGACTTAACTCCCGGGCCATTCTCTTTCCTAGAATGCTTCCCTTCTTCCACTGATCTAAAGTCCCTGCTTCTCTCCTTCTTCTATGTCTCCTCCACCGCTATAAGGTTCCTTTTTCTCTCCTCCAAACTCTGTCAACGGTACACCTCCCTCTTCCCAAAACCCTAA

Coding sequence (CDS)

ATGCCATGGAAGGTGATCGAAGTAGAGTTCACTAAAAGAACGAGGTTGACATATGACAAGAACAAACTGAAAAACAAATGGGATTGGATGAGAAATCGATGGAGTCTTTGGAGAGCACTTAAAGGAAAAGAAACCGGATTAGGTTGGGATCATGAGAAGGGAACAATAAGTCCTAGTGACGAATGGTGGAAGAACAAAATTGAGGAAAATATGCATTTTAAAGCTTTTCAATTTGAAGGTATTGAGCCTGAACTTGAATACAAGATGGAACAACTATTTGGAGTTTCAGTTGCTCAAGGGGGGCTTAAGTATACTCCTGTTCAACGCTCAAATCAAGCACCCCCTTCTGTTTTTTATATCCCTCTTCCACCCCTTGGTGCTGGTAATCTTAATCATGGTGGAAATTCTAGTAATATACCACCTGAGTATGATGATCAAATGAGTGAGAATGGTGGTATTATTCATACCCAAACTAACATGGATTGGCAGGATACTTTTCATGATTCTACTCCAAATCCTTCCCCATCTCCTTCTCCTCCTCCACAATCAACCGAACTCGGAGCTAGAGGAAGTAAAAGAAGTTCTGAAAATGATATTGCAGAGAGCTCGAAACGTTGTAGGATAGAATCTGGTAGTAGGAAAGGAGGGGCTGCACTGTTGATGGAAAAGCTAGATACAATGGTGAAAGTTGTTACTGAGAGGAACATCAAGGATATGGAATTGATGAGCCTTGAAGCACATACACTCAATGACTCATCTAATACACTTGCTGATTCGTTGGCAAAGTTGGTGTCCATGAAAGACTTAACTCCCGGGCCATTCTCTTTCCTAGAATGCTTCCCTTCTTCCACTGATCTAAAGTCCCTGCTTCTCTCCTTCTTCTATGTCTCCTCCACCGCTATAAGGTTCCTTTTTCTCTCCTCCAAACTCTGTCAACGGTACACCTCCCTCTTCCCAAAACCCTAA

Protein sequence

MPWKVIEVEFTKRTRLTYDKNKLKNKWDWMRNRWSLWRALKGKETGLGWDHEKGTISPSDEWWKNKIEENMHFKAFQFEGIEPELEYKMEQLFGVSVAQGGLKYTPVQRSNQAPPSVFYIPLPPLGAGNLNHGGNSSNIPPEYDDQMSENGGIIHTQTNMDWQDTFHDSTPNPSPSPSPPPQSTELGARGSKRSSENDIAESSKRCRIESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMSLEAHTLNDSSNTLADSLAKLVSMKDLTPGPFSFLECFPSSTDLKSLLLSFFYVSSTAIRFLFLSSKLCQRYTSLFPKP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11297.1Spo11297.1mRNA


Homology
[Close]
BLAST of Spo11297.1 vs. NCBI nr
Match: gi|902179341|gb|KNA09334.1| (hypothetical protein SOVF_154590 isoform B [Spinacia oleracea])

HSP 1 Score: 349.7 bits (896), Expect = 5.300e-93
Identity = 187/235 (79.57%), Postives = 201/235 (85.53%), Query Frame = 1 

		  

Query: 71  MHFKAFQFEGIEPELEYKMEQLFGVSVAQGGLKYTPVQRSNQAPPSVFYIPLPPLGAGNL 130
           MHFKAFQFEGIEPE EYKMEQLFGVSVAQGGLKYTPVQRS Q  P V YIPLPPLGAGNL
Sbjct: 1   MHFKAFQFEGIEPEHEYKMEQLFGVSVAQGGLKYTPVQRSKQVSPFV-YIPLPPLGAGNL 60

Query: 131 NHGGNSSNIPPEYDDQMSENGGIIHTQTNMDWQDTFHDSTPNPSPSPSPPPQSTELGARG 190
           +HGGN+SN+PPEYDDQMSENGGIIHTQTNMDW DTFHDSTPNPSPSPSPPPQSTE GARG
Sbjct: 61  SHGGNASNMPPEYDDQMSENGGIIHTQTNMDWHDTFHDSTPNPSPSPSPPPQSTERGARG 120

Query: 191 SKRSSENDIAESSKRCRIESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMSLEAHTLN 250
           +KRSSEND+AESSK CR ESGSRKGGAALLMEKLDTMVKVVTERNIKDMELM+LEA TLN
Sbjct: 121 TKRSSENDVAESSKSCRTESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMNLEARTLN 180

Query: 251 DSSNTLADSLAKLVSMKDLTPGPFSF-LECFPSSTDLKSLLLSFFYVSSTAIRFL 305
           DSSNTLA+SLAKLVSM  L PG   F   C       K +LL+     +T ++++
Sbjct: 181 DSSNTLAESLAKLVSMDGLIPGSPEFCFACTMIEDPQKRILLNGMPDDNTRLQWI 234
[Close]
BLAST of Spo11297.1 vs. NCBI nr
Match: gi|902179340|gb|KNA09333.1| (hypothetical protein SOVF_154590 isoform A [Spinacia oleracea])

HSP 1 Score: 314.7 bits (805), Expect = 1.900e-82
Identity = 170/217 (78.34%), Postives = 184/217 (84.79%), Query Frame = 1 

		  

Query: 89  MEQLFGVSVAQGGLKYTPVQRSNQAPPSVFYIPLPPLGAGNLNHGGNSSNIPPEYDDQMS 148
           MEQLFGVSVAQGGLKYTPVQRS Q  P V YIPLPPLGAGNL+HGGN+SN+PPEYDDQMS
Sbjct: 1   MEQLFGVSVAQGGLKYTPVQRSKQVSPFV-YIPLPPLGAGNLSHGGNASNMPPEYDDQMS 60

Query: 149 ENGGIIHTQTNMDWQDTFHDSTPNPSPSPSPPPQSTELGARGSKRSSENDIAESSKRCRI 208
           ENGGIIHTQTNMDW DTFHDSTPNPSPSPSPPPQSTE GARG+KRSSEND+AESSK CR 
Sbjct: 61  ENGGIIHTQTNMDWHDTFHDSTPNPSPSPSPPPQSTERGARGTKRSSENDVAESSKSCRT 120

Query: 209 ESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMSLEAHTLNDSSNTLADSLAKLVSMKD 268
           ESGSRKGGAALLMEKLDTMVKVVTERNIKDMELM+LEA TLNDSSNTLA+SLAKLVSM  
Sbjct: 121 ESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMNLEARTLNDSSNTLAESLAKLVSMDG 180

Query: 269 LTPGPFSF-LECFPSSTDLKSLLLSFFYVSSTAIRFL 305
           L PG   F   C       K +LL+     +T ++++
Sbjct: 181 LIPGSPEFCFACTMIEDPQKRILLNGMPDDNTRLQWI 216
[Close]
BLAST of Spo11297.1 vs. NCBI nr
Match: gi|731369419|ref|XP_010696546.1| (PREDICTED: uncharacterized protein LOC104909059 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 259.2 bits (661), Expect = 9.300e-66
Identity = 149/285 (52.28%), Postives = 184/285 (64.56%), Query Frame = 1 

		  

Query: 1   MPWKVIEVEFTKRTRLTYDKNKLKNKWDWMRNRWSLWRALKGKETGLGWDHEKGTISPSD 60
           MPWK++EVEF KRT L YD+NKLKNKWDWMRN+W LWR LKG ET LGWDHEKGTIS S 
Sbjct: 55  MPWKILEVEFHKRTNLAYDRNKLKNKWDWMRNKWILWRTLKGNETDLGWDHEKGTISASQ 114

Query: 61  EWWKNKIEENMHFKAFQFEGIEPELEYKMEQLFGVSVAQGGLKYTPVQRSNQ---APPSV 120
           EWWK KIEENMHFKAFQ EG+EPEL+ KMEQLFG S+AQ   K+TPV    Q        
Sbjct: 115 EWWKKKIEENMHFKAFQDEGVEPELDIKMEQLFGGSLAQRVHKFTPVTDCAQLAHCGKET 174

Query: 121 FYIPLPPLGAGNLNHGGNSSNIPPEYDDQMSENGGIIHTQTNMDWQDTFHDSTPNPSPSP 180
            +   PP             N P ++D+++SEN     ++ NM WQ+  +D +P   P+P
Sbjct: 175 IFTSSPPRNV-------TVDNEPHDFDEEISENNVQAPSEANMKWQEVSNDCSPILCPTP 234

Query: 181 SPPPQSTELGARG--SKRSSENDIAESSKRCRIESGSRKGGAALLMEKLDTMVKVVTERN 240
               +  E G RG  SKR SEND ++++KRC+ E          +MEKLD +++VV ERN
Sbjct: 235 L---RCAEHGIRGRESKRVSENDASQNTKRCKTEFA--------IMEKLDAIMRVVIERN 294

Query: 241 IKDMELMSLEAHTLNDSSNTLADSLAKLVSMKDLTPGPFSFLECF 281
            K+ME M+L A TL  SS TL +SLAK+V+M DL  G   F  CF
Sbjct: 295 NKEMESMNLGASTLAVSSPTLVESLAKVVAMPDLIHGSPEF--CF 319
[Close]
BLAST of Spo11297.1 vs. NCBI nr
Match: gi|902197574|gb|KNA13476.1| (hypothetical protein SOVF_116640 [Spinacia oleracea])

HSP 1 Score: 224.6 bits (571), Expect = 2.500e-55
Identity = 139/284 (48.94%), Postives = 166/284 (58.45%), Query Frame = 1 

		  

Query: 1   MPWKVIEVEFTKRTRLTYDKNKLKNKWDWMRNRWSLWRALKGKETGLGWDHEKGTISPSD 60
           MPWK +EVEF  RT L Y+KNKLKNKWDWMR+RWSLW+ALKG+ETGLGWDHEKGTIS S+
Sbjct: 51  MPWKTLEVEFRLRTNLAYEKNKLKNKWDWMRSRWSLWKALKGEETGLGWDHEKGTISASE 110

Query: 61  EWWKNKIEENMHFKAFQFEGIEPELEYKMEQLFGVSVAQ----GGLKYTPVQRSNQAPPS 120
           +WWK KIEENMHFKAF+ EGIEPELE KMEQLFGV V Q             +  +    
Sbjct: 111 DWWKKKIEENMHFKAFKDEGIEPELENKMEQLFGVLVDQRVHNKPSSVVDCSQHVECEKD 170

Query: 121 VFYIPLPPLGAGNLNHGGNSSNIPPEYDDQMSENGGIIHTQTNMDWQDTFHDSTPNPSPS 180
              +P PP    +LN G  S     E DD++SEN      Q N + Q+   +   +P PS
Sbjct: 171 TVPVPSPP---PSLNVGDASY----ECDDEISENNAFDPNQANTEQQEQLRNDHHSPIPS 230

Query: 181 PSPPPQSTELGARGSKRSSENDIAESSKRCRIESGSRKGGAALLMEKLDTMVKVVTERNI 240
           P P         R      END +ES K C+ E                    VVTERN+
Sbjct: 231 PVP--------LRCCGHGFENDASESQKSCKTE-------------------LVVTERNV 290

Query: 241 KDMELMSLEAHTLNDSSNTLADSLAKLVSMKDLTPGPFSFLECF 281
           + MELM+ EA  L DSS+TL +S+AKLVS+  L  G   F  CF
Sbjct: 291 RVMELMNNEARKLVDSSHTLVESIAKLVSIPGLIHGSPEF--CF 298
[Close]
BLAST of Spo11297.1 vs. NCBI nr
Match: gi|870851739|gb|KMT03747.1| (hypothetical protein BVRB_8g188950 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 200.7 bits (509), Expect = 3.900e-48
Identity = 120/194 (61.86%), Postives = 140/194 (72.16%), Query Frame = 1 

		  

Query: 89  MEQLFGVSVAQGGLKYTPVQRSNQAP--PSVFYIPLPPLGAGNLNHGGNSSNIPPEYDDQ 148
           MEQLFG SVAQGGLK+TPVQR  +    PS  +I   PL A N+       N+  + +D 
Sbjct: 1   MEQLFGSSVAQGGLKFTPVQRPKELVYIPSTTHIHSSPLDATNVG------NVMVDNEDV 60

Query: 149 MSENGGIIHTQTNMDWQDTFHDSTPNPSPSPSPPPQSTELGARGSKRSSENDIAESSKRC 208
           MS+NG + H +TNM+WQ+ ++DSTP PSPSP    QSTE   +GSKR SEND+AESSK C
Sbjct: 61  MSDNGDLNHNETNMEWQEVWNDSTPLPSPSP----QSTEHVVKGSKRCSENDVAESSKSC 120

Query: 209 RIESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMSLEAHTLNDSSNTLADSLAKLVSM 268
             ESGSRKGGA LLMEKLDTMVKVVTERN K+MELMS+EA TL +SS+TL DSLAKLVSM
Sbjct: 121 WTESGSRKGGAGLLMEKLDTMVKVVTERNTKEMELMSIEAQTLAESSHTLVDSLAKLVSM 180

Query: 269 KDLTPG-PFSFLEC 280
            DL  G P  F  C
Sbjct: 181 PDLILGSPEFFFAC 184
[Close]
BLAST of Spo11297.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPX9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154590 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.700e-93
Identity = 187/235 (79.57%), Postives = 201/235 (85.53%), Query Frame = 1 

		  

Query: 71  MHFKAFQFEGIEPELEYKMEQLFGVSVAQGGLKYTPVQRSNQAPPSVFYIPLPPLGAGNL 130
           MHFKAFQFEGIEPE EYKMEQLFGVSVAQGGLKYTPVQRS Q  P V YIPLPPLGAGNL
Sbjct: 1   MHFKAFQFEGIEPEHEYKMEQLFGVSVAQGGLKYTPVQRSKQVSPFV-YIPLPPLGAGNL 60

Query: 131 NHGGNSSNIPPEYDDQMSENGGIIHTQTNMDWQDTFHDSTPNPSPSPSPPPQSTELGARG 190
           +HGGN+SN+PPEYDDQMSENGGIIHTQTNMDW DTFHDSTPNPSPSPSPPPQSTE GARG
Sbjct: 61  SHGGNASNMPPEYDDQMSENGGIIHTQTNMDWHDTFHDSTPNPSPSPSPPPQSTERGARG 120

Query: 191 SKRSSENDIAESSKRCRIESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMSLEAHTLN 250
           +KRSSEND+AESSK CR ESGSRKGGAALLMEKLDTMVKVVTERNIKDMELM+LEA TLN
Sbjct: 121 TKRSSENDVAESSKSCRTESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMNLEARTLN 180

Query: 251 DSSNTLADSLAKLVSMKDLTPGPFSF-LECFPSSTDLKSLLLSFFYVSSTAIRFL 305
           DSSNTLA+SLAKLVSM  L PG   F   C       K +LL+     +T ++++
Sbjct: 181 DSSNTLAESLAKLVSMDGLIPGSPEFCFACTMIEDPQKRILLNGMPDDNTRLQWI 234
[Close]
BLAST of Spo11297.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRM7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154590 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.300e-82
Identity = 170/217 (78.34%), Postives = 184/217 (84.79%), Query Frame = 1 

		  

Query: 89  MEQLFGVSVAQGGLKYTPVQRSNQAPPSVFYIPLPPLGAGNLNHGGNSSNIPPEYDDQMS 148
           MEQLFGVSVAQGGLKYTPVQRS Q  P V YIPLPPLGAGNL+HGGN+SN+PPEYDDQMS
Sbjct: 1   MEQLFGVSVAQGGLKYTPVQRSKQVSPFV-YIPLPPLGAGNLSHGGNASNMPPEYDDQMS 60

Query: 149 ENGGIIHTQTNMDWQDTFHDSTPNPSPSPSPPPQSTELGARGSKRSSENDIAESSKRCRI 208
           ENGGIIHTQTNMDW DTFHDSTPNPSPSPSPPPQSTE GARG+KRSSEND+AESSK CR 
Sbjct: 61  ENGGIIHTQTNMDWHDTFHDSTPNPSPSPSPPPQSTERGARGTKRSSENDVAESSKSCRT 120

Query: 209 ESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMSLEAHTLNDSSNTLADSLAKLVSMKD 268
           ESGSRKGGAALLMEKLDTMVKVVTERNIKDMELM+LEA TLNDSSNTLA+SLAKLVSM  
Sbjct: 121 ESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMNLEARTLNDSSNTLAESLAKLVSMDG 180

Query: 269 LTPGPFSF-LECFPSSTDLKSLLLSFFYVSSTAIRFL 305
           L PG   F   C       K +LL+     +T ++++
Sbjct: 181 LIPGSPEFCFACTMIEDPQKRILLNGMPDDNTRLQWI 216
[Close]
BLAST of Spo11297.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E179_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g199310 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 6.500e-66
Identity = 149/285 (52.28%), Postives = 184/285 (64.56%), Query Frame = 1 

		  

Query: 1   MPWKVIEVEFTKRTRLTYDKNKLKNKWDWMRNRWSLWRALKGKETGLGWDHEKGTISPSD 60
           MPWK++EVEF KRT L YD+NKLKNKWDWMRN+W LWR LKG ET LGWDHEKGTIS S 
Sbjct: 55  MPWKILEVEFHKRTNLAYDRNKLKNKWDWMRNKWILWRTLKGNETDLGWDHEKGTISASQ 114

Query: 61  EWWKNKIEENMHFKAFQFEGIEPELEYKMEQLFGVSVAQGGLKYTPVQRSNQ---APPSV 120
           EWWK KIEENMHFKAFQ EG+EPEL+ KMEQLFG S+AQ   K+TPV    Q        
Sbjct: 115 EWWKKKIEENMHFKAFQDEGVEPELDIKMEQLFGGSLAQRVHKFTPVTDCAQLAHCGKET 174

Query: 121 FYIPLPPLGAGNLNHGGNSSNIPPEYDDQMSENGGIIHTQTNMDWQDTFHDSTPNPSPSP 180
            +   PP             N P ++D+++SEN     ++ NM WQ+  +D +P   P+P
Sbjct: 175 IFTSSPPRNV-------TVDNEPHDFDEEISENNVQAPSEANMKWQEVSNDCSPILCPTP 234

Query: 181 SPPPQSTELGARG--SKRSSENDIAESSKRCRIESGSRKGGAALLMEKLDTMVKVVTERN 240
               +  E G RG  SKR SEND ++++KRC+ E          +MEKLD +++VV ERN
Sbjct: 235 L---RCAEHGIRGRESKRVSENDASQNTKRCKTEFA--------IMEKLDAIMRVVIERN 294

Query: 241 IKDMELMSLEAHTLNDSSNTLADSLAKLVSMKDLTPGPFSFLECF 281
            K+ME M+L A TL  SS TL +SLAK+V+M DL  G   F  CF
Sbjct: 295 NKEMESMNLGASTLAVSSPTLVESLAKVVAMPDLIHGSPEF--CF 319
[Close]
BLAST of Spo11297.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1S6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_116640 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.800e-55
Identity = 139/284 (48.94%), Postives = 166/284 (58.45%), Query Frame = 1 

		  

Query: 1   MPWKVIEVEFTKRTRLTYDKNKLKNKWDWMRNRWSLWRALKGKETGLGWDHEKGTISPSD 60
           MPWK +EVEF  RT L Y+KNKLKNKWDWMR+RWSLW+ALKG+ETGLGWDHEKGTIS S+
Sbjct: 51  MPWKTLEVEFRLRTNLAYEKNKLKNKWDWMRSRWSLWKALKGEETGLGWDHEKGTISASE 110

Query: 61  EWWKNKIEENMHFKAFQFEGIEPELEYKMEQLFGVSVAQ----GGLKYTPVQRSNQAPPS 120
           +WWK KIEENMHFKAF+ EGIEPELE KMEQLFGV V Q             +  +    
Sbjct: 111 DWWKKKIEENMHFKAFKDEGIEPELENKMEQLFGVLVDQRVHNKPSSVVDCSQHVECEKD 170

Query: 121 VFYIPLPPLGAGNLNHGGNSSNIPPEYDDQMSENGGIIHTQTNMDWQDTFHDSTPNPSPS 180
              +P PP    +LN G  S     E DD++SEN      Q N + Q+   +   +P PS
Sbjct: 171 TVPVPSPP---PSLNVGDASY----ECDDEISENNAFDPNQANTEQQEQLRNDHHSPIPS 230

Query: 181 PSPPPQSTELGARGSKRSSENDIAESSKRCRIESGSRKGGAALLMEKLDTMVKVVTERNI 240
           P P         R      END +ES K C+ E                    VVTERN+
Sbjct: 231 PVP--------LRCCGHGFENDASESQKSCKTE-------------------LVVTERNV 290

Query: 241 KDMELMSLEAHTLNDSSNTLADSLAKLVSMKDLTPGPFSFLECF 281
           + MELM+ EA  L DSS+TL +S+AKLVS+  L  G   F  CF
Sbjct: 291 RVMELMNNEARKLVDSSHTLVESIAKLVSIPGLIHGSPEF--CF 298
[Close]
BLAST of Spo11297.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BRD5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g188950 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.700e-48
Identity = 120/194 (61.86%), Postives = 140/194 (72.16%), Query Frame = 1 

		  

Query: 89  MEQLFGVSVAQGGLKYTPVQRSNQAP--PSVFYIPLPPLGAGNLNHGGNSSNIPPEYDDQ 148
           MEQLFG SVAQGGLK+TPVQR  +    PS  +I   PL A N+       N+  + +D 
Sbjct: 1   MEQLFGSSVAQGGLKFTPVQRPKELVYIPSTTHIHSSPLDATNVG------NVMVDNEDV 60

Query: 149 MSENGGIIHTQTNMDWQDTFHDSTPNPSPSPSPPPQSTELGARGSKRSSENDIAESSKRC 208
           MS+NG + H +TNM+WQ+ ++DSTP PSPSP    QSTE   +GSKR SEND+AESSK C
Sbjct: 61  MSDNGDLNHNETNMEWQEVWNDSTPLPSPSP----QSTEHVVKGSKRCSENDVAESSKSC 120

Query: 209 RIESGSRKGGAALLMEKLDTMVKVVTERNIKDMELMSLEAHTLNDSSNTLADSLAKLVSM 268
             ESGSRKGGA LLMEKLDTMVKVVTERN K+MELMS+EA TL +SS+TL DSLAKLVSM
Sbjct: 121 WTESGSRKGGAGLLMEKLDTMVKVVTERNTKEMELMSIEAQTLAESSHTLVDSLAKLVSM 180

Query: 269 KDLTPG-PFSFLEC 280
            DL  G P  F  C
Sbjct: 181 PDLILGSPEFFFAC 184
[Close]
BLAST of Spo11297.1 vs. ExPASy Swiss-Prot
Match: LIMYB_ARATH (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana GN=LIMYB PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.200e-6
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 1 

		  

Query: 3   WKVIEVEFTKRTRLTYDKNKLKNKWDWMRNRWSLWRALKGKETGLGWDHEKGTISPSDEW 62
           WK I     + T L Y + +LKN WD  R  W +W  L G  + + WD E  +   ++E 
Sbjct: 201 WKTILGTINENTGLGYTRPQLKNHWDCTRKAWKIWCQLVG-ASSMKWDPESRSFGATEEE 260

Query: 63  WKNKIEENMHFKAFQFEGIEPELEYKMEQLFGVSVAQGGLKYTPVQRSNQ 113
           W+  I EN   +A QF   E     ++  +F   V + G  YTP  RS +
Sbjct: 261 WRIYIRENP--RAGQFRHKEVPHADQLAIIFN-GVIEPGETYTPPSRSRK 306
[Close]
BLAST of Spo11297.1 vs. TAIR (Arabidopsis)
Match: AT5G05800.1 (unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.200e-7
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 1 

		  

Query: 3   WKVIEVEFTKRTRLTYDKNKLKNKWDWMRNRWSLWRALKGKETGLGWDHEKGTISPSDEW 62
           WK I     + T L Y + +LKN WD  R  W +W  L G  + + WD E  +   ++E 
Sbjct: 201 WKTILGTINENTGLGYTRPQLKNHWDCTRKAWKIWCQLVG-ASSMKWDPESRSFGATEEE 260

Query: 63  WKNKIEENMHFKAFQFEGIEPELEYKMEQLFGVSVAQGGLKYTPVQRSNQ 113
           W+  I EN   +A QF   E     ++  +F   V + G  YTP  RS +
Sbjct: 261 WRIYIRENP--RAGQFRHKEVPHADQLAIIFN-GVIEPGETYTPPSRSRK 306
[Close]
BLAST of Spo11297.1 vs. TAIR (Arabidopsis)
Match: AT3G11290.1 (unknown protein)

HSP 1 Score: 48.5 bits (114), Expect = 8.800e-6
Identity = 24/75 (32.00%), Postives = 37/75 (49.33%), Query Frame = 1 

		  

Query: 3   WKVIEVEFTKRTRLTYDKNKLKNKWDWMRNRWSLWRALKGKETGLGWDHEKGTISPSDEW 62
           WK+I     + T  ++ + +LKN WD  R  W +W  + G    + WD    T   +DE 
Sbjct: 199 WKMILETINQNTGKSFTRPQLKNHWDCTRKSWKIWCQVIGAPV-MKWDATSRTFGATDED 258

Query: 63  WKNKIEENMHFKAFQ 78
           WKN ++EN     F+
Sbjct: 259 WKNYLKENHRAAPFR 272
The following BLAST results are available for this feature:
BLAST of Spo11297.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902179341|gb|KNA09334.1|5.3e-9379.5hypothetical protein SOVF_1545... [more]
gi|902179340|gb|KNA09333.1|1.9e-8278.3hypothetical protein SOVF_1545... [more]
gi|731369419|ref|XP_010696546.1|9.3e-6652.2PREDICTED: uncharacterized pro... [more]
gi|902197574|gb|KNA13476.1|2.5e-5548.9hypothetical protein SOVF_1166... [more]
gi|870851739|gb|KMT03747.1|3.9e-4861.8hypothetical protein BVRB_8g18... [more]
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BLAST of Spo11297.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QPX9_SPIOL3.7e-9379.5Uncharacterized protein OS=Spi... [more]
A0A0K9QRM7_SPIOL1.3e-8278.3Uncharacterized protein OS=Spi... [more]
A0A0J8E179_BETVU6.5e-6652.2Uncharacterized protein OS=Bet... [more]
A0A0K9R1S6_SPIOL1.8e-5548.9Uncharacterized protein OS=Spi... [more]
A0A0J8BRD5_BETVU2.7e-4861.8Uncharacterized protein OS=Bet... [more]
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BLAST of Spo11297.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LIMYB_ARATH2.2e-632.7L10-interacting MYB domain-con... [more]
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BLAST of Spo11297.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G05800.11.2e-732.7unknown protein[more]
AT3G11290.18.8e-632.0unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 3..65
score: 1.4
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 3..112
score: 5.7
NoneNo IPR availablePANTHERPTHR31704:SF9SUBFAMILY NOT NAMEDcoord: 3..112
score: 5.7

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo187820.69Barchart | Table
Spo092900.68Barchart | Table