Spo11298 (gene) | SpinachBase

Overview


Name	Spo11298
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Cytochrome b6-f complex iron-sulfur subunit (1.10.9.1)
Location	chr4 : 58893120 .. 58901668 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGATCAACAAAAACCTCTAAATAAAAAGGCAAATTAAAAATACCCAATTAAACCAAAAGAAATAGAAAAAGGAAACCTTCTAATACGAAGTATGAATTATATCCATCAAACGAACAAATCGTACTCTTCAGCCAGACTTGCCAAGAGAACAACACCAACAACAACAACAAACACTCATATGTACTTCCCCACTCAAAATACCTAAATTTCTCCACTTATTTACTTATTAAATATTTACACAACTCCACTTACTTTATTATTTTATTTCATAATACCCGTGACAGAACAAATGTATCTCTTAAATAAATACGGAGGGAATACTTAGTAAAATTTAACCATTAATATTTAACCCCTTAATGATTATTGGCATTCCAGACAGGCCCTGAAGGTAACTCGAGTCCGTAGTAAAGAATATGAGAACGTGTGGCTCTGTAATACTAAAAAGCAGATAATCCACTTACCTTATCCACAAAAATGAGTCGTGGCTGAACCACCCTCACATATTTTTGAAATTACTATTAGACACTCAATGTAATCGAATTATCATCAGCCTTTCCCATACTCATCATCTCCATCTTCAACCAATTGCATCTTACAGAAAATTCATCCCTCATGGCTTCCTCCACTCTTTCATCTGCCACCCCGTCTCAGGTACGTACCCTCGACTCGTTAAAAACCTTTAATAGTCAGGCGTGACATCAAATTATCGCTGACCCTCTTAATTTTTGTGTGTGTATTTTGTTGGTTTAGCTATGTTCGAGCAAGAATGGAATGTTCGCACCATCTTTAGCTTTGGCGAAAGCGGGTAGAGTGAATGTGTTGATTAGTAAGGAAAGAATACGAGGGATGAAGCTGACATGCCAAGCTACTAGCATTCCAGCTGATAATGTGCCTGACATGCAAAAAAGAGAGACATTGAATTTGTTGTTGTTGGGTGCTCTTTCTCTTCCTACTGGTTATATGTTGCTTCCTTATGCATCCTTCTTTGTTCCTCCTGGGTATGCTTCATAACCTTCCTACATATCTCCTTTTACAAAAAAAAATTAATCAAATTATCTTTACCTATTATGTCCCTCTTTATGTTTCTTGTTTGTAGGATATGTCATAAATCTCTTCCTATTCCTGTTTTTTCTTATTTAGAATCAACTCACTTCATTGTATCAGAGCTATGAATACGGTTGTTTGAGTTGAGACTAATTGTTATATATGGAATAAATAGAGAGAAGCACAAATCAAGGAGGCATAAGGTGGAACTTGTATTTGCATTTAGTTTAAGTTAAGGGGGTATATTTTTCATGCATTTATGTTTGGAAGGAAAATTCAATGGGCCCTCTTGATACCTAGCGAGCAGGTCCGTTACAAACTCCACTATGTTCACGAAATCGCTGGGTGCCCGTTGGGTTCTCCGCCCAACTTTTCCTCTCCATATTTGGGCTAGCTACGTGGCTTATTGTGGAGCGTTGGATTAACTCTTTAGCTATATATATATAATATATATATATATATATATATATATATATTTGTTGTACTCCATTTTCATGAGGTATTCACACATTCAAACACTTAGAACTAGGGTTCTTGAGAGAGTTTGGAAAGGGAATTGAATTCTAAGCAATTGATGCTCTTGTAATCTTCATTCATCATCAATACTACTCCATAGTGCATAGGGTGGTTTTTTCTCCCGGTTCTCGGGTTTCCCACGATAACCTTTTCTCCTCTCTCATTTCAATTTCTTCGTTATTGTTTCTTGAATTTGTTCTTGTTTGTTAAACTTGATTCCATATTAGATTGTCACACTAAATCATTTGAATTGGTATCATGAGCCATGGTTGAATCTTTGGTGTTTATGATTTGAGGCTTTGTGAAATCTTGTTGTTTGTGATTGAAATTCAAAGTTTGGGGCATGGGTATTCAAAGTTTGAATTTGTTGGAGTAAAATTTCACTATTTGTTGTTGAAACCCCACGGTAGTGAACTTTGTTGTTATTAACAATGGATGAGGGCAAGTTGAAAATCGAGAAGTTTGATGGTAAGGACTTTGGGTTTCAGAAGATGCAAATAAAGGACTATTTGTACAAAAAAAAAAACCTATTTTGCCTCTTGATAGTAAGAAACCAAATCATATGAAGAAGGAAGATTGGAGAGTGCTAGATAGACAAGCACTTGGAGTGATAAGATTGTCATTGGCAAAGAGTGTTGTCTACAATGTCAAAGATGAAGAGACGACGGATGGGGTGTTGAAGACATTGACAAATATGTATGAAAAACCCTCGGCTGTGAACAAGGTGTTCTTGATGCGTCGTTTGTTCGAAATTGAGATGAATGATAATGGTTCGACCGCCGAACACATCAATTAATTCAATTCGGTTATTTCTCAATTTTCTTCGGTCGAGATATGAGGATGAGGTGAAGGCCTTGATTTTGTTATCATCGTTGCCTAGATCATGGGATACCGTTGTTGCCGCTATAAGAAACTCTTTCGGCAAGGAAAAGTTGAAATGTGATGATGTGAGAGACTTAATCTTGAGTGAGAGTTTGAGGAGAAAGGAATTATGAGAATCGTCGGGTGGTGCGCATTCTAGTGATGGAAGGGGACGTGGAAGACATCAAAAGGGTAACTCTAGAACAGGGAGATCGAAGAGTAGGGGAATGAGTAAATCGTAGGGGAAAGCAAATATTGTGTGTTGGGGTTGCGGTGTAAAATGGTCATTCTAAAAGGGAATGCCCAAATCCCAAGAACAACGGAGGTGTGCATCAAAAGAACCATGAAGAATCAAGTCCATCGGTAAGCTTGGCCTCAAGCGATGAATTTGGTGATGCTTTGATTTTGAGCGTGGACAGTCCCACTGAGTCTTGGATCCTTGATTCGGGAGCTTCATTCCATTCTTCTTCATGCAAGGATATTTTTCGGAACTTCAAGAGTGGCAAGTTTGGAAAAGTGTACCTAGCAGATGACGAACCATTGGATATCACGGGGAAGGGAGATGTCATGATCAAGAATTCAAGTGGGAGCTTATGGAAACTTGAAGATGTTAGGTTTATGCCTAAGCTAAGGAAAAATTTGATTTCGGTGGGTCAATTGGACTCATGTGGTTATAGAAGGATGTTTAATGATAGTGCTTGAAAAGTGTCAAGAGGGGCTATGGTGGTGGCTCGGGGCACGAAGTCCAACACATTGTACACTACCTTAAGATGTACTAACATGGTTGCTACAACCACGGGATGTGACACCAAACTATGGCATACTCGGTTTGGTCACATGAGTGAGAAAAAAGATGAAAACTCTAGCTTCAAAGGGTAAGTAGTCGGATTTGAAATCAATCGACATGGACTTTTGTGAGACATGTGTTTTTGGCAAGCAAAAGAAGGTGTCATTCACAAAGATCAAATGGTCCTTGAAGAAGGAGAAGGTAGAGCTTGTGCACATATATGTTTGGGGCCCATACCCAATCAAATCTCTTAGGTGGATCTCACTATTTTGTTACTTTCATTGATCACTCAACTCGGAAAGTGTGGGTATACTTTATGAAGCAAAAGTCGGAAGTCTTTGAGAAATTCAAGACTTGGAGGGCCGGGTTGAGAACATGACGGGCAAGAAAATCAATAGTATAAAGTCCAACAATGGAGGGGAGTATGAGTTGAATTCTAACAAGGAAATTTGTAAGGAACATGACATTGTTTTGGTGAAGACCATACATGGCAAGCCTCGCCAAAACGGGGTCGTGGAAAGGATGAATAGAACACTTCTTGAGAGAGCAAGGTGTATGAGGTTGTGTTCAGGCCTCCCAAAATGTTTTTGGGCGTATGCCGTTAGTACCGCGGCTTACTTGATAAACCGTGGACCGTCGTTACCCTTGGATTTCAAGATTCCGGAGGAGGAATGGAGTGGAAAGAGGTGTCCTTTACTCATTGGAAGACCTTCGGTTGTGTAGCCTATTTGCAATCCGAGAAAAGAGACAGGTTTGATCCAAAGGTCATCAAATGCTACTTTATCGGGTATGGAGGTGAGAAATATGGTTATAGATTGTGGGATCCTAAGAGTCGAAAGGTTCTTAGGAATTGTGATATTACCTTTGATGATAATTACTTGTACAAGAATAATTTTGGCGGAAAGTCCGTTGAGAAAGAGGTTATTGGAGATGAACGGGAAATTATGGAGCTTGATGTTGGTGTTAAAAGAGACAGCGAAAGAAGATGTTGAGGTGCCACTTCAACACACATCACCTCAACGAGTTGTTCATGTTCTGGAAGATCCGGTTTCTAGTGAATCGGATGAGGATAATCACCTTGAGATGGATGAGGTTGTGACTCAAGAAGAGCCGATTACACCACCACCGTTAAGGAGGTCAACAAGGCCCACTAAACCACCAAGCAAGTTTTCTCCATCCATGTACTATCTATTGTTGACAGATGCCGGTGAGCCGGAATCCTACAATGAGGCAATGAAGACGAGTGACTCGTAGAAGTGGGAGCAAGAAATGGGTGAAGAGATGAACTCATTGGAGAACAACCACACTTGGTTGCTAGTTGGGTTTCCTAAGGGAAAGAGAGCACTTATGTGAAAATGGCTCTTTCAAAAGAAAGAGGAACCAGAAGATAAAATTTGGTTCAATGCAAGGCTTGTAGTGAAAGGTTTTCCACAAAAGGAGGGCATTATTATCACGAGGTCTTTGCACCGGTTGTGAAGTTAACCACTATAAGAATCTTGTTGGCAATCGTGGCTTTGGAAAACTTATTTCTTGAGAAAATGAATGTAAAAAGAGCGTTTTTGCATGTGGATTTGACAGAAGAAATCTCTATGAAAGAACCGGAAGGTCTTCAAGTTCCGCGAAAGGAGAACTTGGTTTGCAAGCTAAAATAGAGTATTTTTGGGTTGAAGCAAGCTCTAAGGCAATGTTACAAGAAGTTTGACAGTTTCATGCTAGGGTACGAGTTCGTGAGAGCGGATGGAGACCATTGTTGCTATTTTCAAAGGTATGATGATGGTGGTTACATTTACTTGCTTTTATATGTTGATGATATGCTTATTGAGTTATTGCAAGTACTAGCATGTACAATTGTGAATGATTTGAAAAGGAAGTTGTCTAAAAGGTTTGAGATGAAGGATTTGGGTGAGGCTAAGCAAATACTTGGCATGAGAATCTCAAGAGACAAATCAACGGGCGGAGGTTGTCACAAGAAGAGTATGTCAAGAAAGTACTAAAGCGTTTCAACATGGTTGATTCCAAGCCTCGGAACTCGCCTCTTTCGCTTGATCTCAAGCTCACTAAGGAGGATTGTCCAAAGACAAAGGAGTAAAAGGAAAAGGTGGTCTCTATTCCTTATTCTTCAGCCGTTGGTAGCATGATGTATGCTATGGTTTGCACAAGACCCGATATTTCCCATGCGGTGGGAGTTGTGAGTAGATTCATGTCAAATCCGGGTGAACGGCATTGGGAAGCCGTTAAATGGATTTTGAGGTACTTGTTGGGTACTTCAAGTATGATCCTTTGTTTTGGAAGAAATGGAGTTGTTCTTGAAGGTTTTGTTGATGCCAATTTTGGCGGGTATTATGATTCAAGCAAAAGAATTTCGGGGTATGTGTATACTATATTGGTGGTACGACCAATAGAATGGTTGAAGGGTATTCTTAAGGAAATGAGCATGAAATAAGGAGTGTGTGCGTTGCATAGTGATAGCCAAAGTGCGGTTCAATTGGCTAAGAATCATGTGTTCCATTATCGCGTAAAACACATTAAGAGGCGTTATCACTATACAAGAAGTCTAGTAGAGGATGAAACCATGTGTTTCAGGAAGATTGCCAGAGCGAAGAATCCGACGGATATGTTCACTAAAGTTGTTTCTAGTGACGAATTGGGGTTGTGTCGAACCTCAATCGGTCTCCATCACTAAGTGTTAGAGGTTTGCGCTATGGTGAAAAATTGGTGTTGAATGATGATGATTAAAGTATATTAAAGTTTAGACTCTTGATCGTCCTTATATCCTAGTGGGAGATTGTTAGGATATATGTGTTAGAGAAAAGCACAAATTAAGGAGGTATACAGTGGAACTTGTGTTTGCATTTGGTCTAAGTGAAGGGGGTATATTTTTCATGCATTTATGTTGGGAAGGAAAATCCAACGGGCCCACTTGATACCTAGATGGCAGGTCAGTTACAAACTACATTGTGTTCGCGAAATCCATCAGGCTCGCTGGGTGCCCGCTGGTTTCTCCGCCCAACTTTTCCTCTCCATATTTTAGCTAGCTACGTGGCTTATTGTGGAGAGTAGGATTAGCTCTTTTGCTAGATCCTATATATACTTGTTGTACTCCATTTTCATTAGGTATTCACACATTCAAACACTTAGAAATAGTGTTCTTGAGAGAGTTTGGGAAGGGCATTGAATTCTAAGAAATTGATGCTCTTGTAATCTTCATTCATCATCAATACTACCCCATAGTGCATAGGGTGATTTTTTCTCCCAGTTCTCGGGTTTCCCACGGTAACCCTGTCTCCTCCCTCATTTCAATTTCTTCATTATTATTTCTTGAACTTGTTCTTGTTTGTTAAACTTGATTGCAAATTAGATTGTCACACTAAATCATTTCAAAAACAACAAATTCTTAATTAACCATGGTGTAGAATAATAAATATTATAACACGGAAAAGTCAACCCAAAATGATTAAACGTTACTCGATATAATTAATTTTAAAGGTTACCTACTTTTTAATGATAAATCTTTTCTCATTCATAAAATAAAATGTACCACTTCAAAATCATTAATATTGTATAGAGGTAATCATACAATTCTTTAAAATGTTTATCAAACAAATGTTTTTCATGATAAAAGTTATTGATTAAAACATTGTAAAAGTTATCAAAAATATTAGTAAAACTTACCCCGATGTACAATAAATTTATTGCACACCGAGTGTGTGCAAGACCTTGTTGCAAAACTAATCTTATGGGACGAAGGGAGTAACTAATTATATTAAATCATGTTGCATTCATTTGTTTCAATATCCTGTATTTCTTATCAGAATCCATGATAGTCATTAAACATATGGTGGTGTTCGAGTTTAAGTATGATCTAAGTTTGTTTGTTTCCCTGAAAAACCGACAACAGTGGAGGAGCTGGCACTGGTGGAACCATCGCCAAGGATGCTCTAGGAAATGATGTAATTGCTGCTGAATGGCTCAAGACCCATGCACCAGGAGACCGGACCCTTACCCAAGGATTAAAGGTATATTTGTCGTCCTTCATTATCTGTCTTTTCTCTCACATTGCTCTATCTTTTGCCTTACACTAACTCGATACTTAGAAGTAGGTAAGAAAAAGCATAGATCATCTCAATAATTCCAGTTGTTATTGCAGAGTTATGGTTTTTGATATATTGTCTATTGGTTCGTTATTTAACGAAAGGGGAGAGAAATTGATATGGGTTATGATCTCGTGGAATATAGGGTTTAAAGTAATATAACTAAAATTACTAATTTTGTATTTAGCATGATACTGATGTCTAATATATACTGAGAAGCAGTAAGCCAAGTGGCAAATTAAGTTGCTTCTTACAATTTGATGTTGCTGCATCAGGGAGATCCAACATACTTGGTTGTGGAGAGCGACAAAACTCTTGCCACATTTGGAATAAATGCTGTCTGCACACATCTTGGATGTGTGGTGCCATTTAATGCTGCTGAGAACAAATTCATTTGTCCATGCCATGGATCCCAATACAATAACCAAGGCAGAGTTGTTCGAGGCCCTGCACCTTTGGTAAGCCCTCAACATGCATCCTTGAGTTTTATCACTTAATCTTAAACTTCCTGACCTCTTTTCTTATGTAATTGTGTGACAGTCATTGGCATTGGCCCACTGCGATGTTGATGATGGAAAGGTGGTGTTTGTTCCATGGACTGAAACAGATTTTAGAACTGGTGAAGCACCATGGTGGTCTGCATAAAACTAGACCGCACCATATCAGAAGCTGTTTTCAAATTCATTTGTGGAAGTGGATTACTTTATTCTGCATCACCAAAGATACATACAGTACAAGTACAGTAGAGTTAGTATTGTAAACTGTGTGATGTTTGAATCTCTAAGGACACCAATATTCAAGTTAATCATGGCAGATACATTTCCTTGCTGCTGAAATACATGTTTGTCTATATCTTATATATTGCCTTATTTCTGAACTAATTAAAAGCCATTGTTTACAACAGATGTGCTAAAAATTTATCATTATTCAGGCCTTCAGGGTTAACACGACACCAAGGTTTGTGTGCACTCACAAGCCTCGGTTGGAGACCATAATACTTGCCCAGAAAAAACAGAAAATTGTTTATTTGAGAGAGAATGTAGAGAATCGTTTTCTGTGAATGTGTGTTTATGAAAAATGGAAGGGAGGTATTTATAGGAGAGCTGCAACAACCATAAACGACTAGTAGTGGAGTAGTGGGTGGTTACCACGTTTACTGGGTAATTATGGGGCAGTTAAAACAACATTTAGTGGGGGTTAATGGTACAGTTACGGGATTAGTTGTTGATTAATTATTTCTACCCGTTAG

mRNA sequence

TAGATCAACAAAAACCTCTAAATAAAAAGGCAAATTAAAAATACCCAATTAAACCAAAAGAAATAGAAAAAGGAAACCTTCTAATACGAAGTATGAATTATATCCATCAAACGAACAAATCGTACTCTTCAGCCAGACTTGCCAAGAGAACAACACCAACAACAACAACAAACACTCATATGTACTTCCCCACTCAAAATACCTAAATTTCTCCACTTATTTACTTATTAAATATTTACACAACTCCACTTACTTTATTATTTTATTTCATAATACCCGTGACAGAACAAATGTATCTCTTAAATAAATACGGAGGGAATACTTAGTAAAATTTAACCATTAATATTTAACCCCTTAATGATTATTGGCATTCCAGACAGGCCCTGAAGGTAACTCGAGTCCGTAGTAAAGAATATGAGAACGTGTGGCTCTGTAATACTAAAAAGCAGATAATCCACTTACCTTATCCACAAAAATGAGTCGTGGCTGAACCACCCTCACATATTTTTGAAATTACTATTAGACACTCAATGTAATCGAATTATCATCAGCCTTTCCCATACTCATCATCTCCATCTTCAACCAATTGCATCTTACAGAAAATTCATCCCTCATGGCTTCCTCCACTCTTTCATCTGCCACCCCGTCTCAGCTATGTTCGAGCAAGAATGGAATGTTCGCACCATCTTTAGCTTTGGCGAAAGCGGGTAGAGTGAATGTGTTGATTAGTAAGGAAAGAATACGAGGGATGAAGCTGACATGCCAAGCTACTAGCATTCCAGCTGATAATGTGCCTGACATGCAAAAAAGAGAGACATTGAATTTGTTGTTGTTGGGTGCTCTTTCTCTTCCTACTGGTTATATGTTGCTTCCTTATGCATCCTTCTTTGTTCCTCCTGGTGGAGGAGCTGGCACTGGTGGAACCATCGCCAAGGATGCTCTAGGAAATGATGTAATTGCTGCTGAATGGCTCAAGACCCATGCACCAGGAGACCGGACCCTTACCCAAGGATTAAAGGGAGATCCAACATACTTGGTTGTGGAGAGCGACAAAACTCTTGCCACATTTGGAATAAATGCTGTCTGCACACATCTTGGATGTGTGGTGCCATTTAATGCTGCTGAGAACAAATTCATTTGTCCATGCCATGGATCCCAATACAATAACCAAGGCAGAGTTGTTCGAGGCCCTGCACCTTTGTCATTGGCATTGGCCCACTGCGATGTTGATGATGGAAAGGTGGTGTTTGTTCCATGGACTGAAACAGATTTTAGAACTGGTGAAGCACCATGGTGGTCTGCATAAAACTAGACCGCACCATATCAGAAGCTGTTTTCAAATTCATTTGTGGAAGTGGATTACTTTATTCTGCATCACCAAAGATACATACAGTACAAGTACAGTAGAGTTAGTATTGTAAACTGTGTGATGTTTGAATCTCTAAGGACACCAATATTCAAGTTAATCATGGCAGATACATTTCCTTGCTGCTGAAATACATGTTTGTCTATATCTTATATATTGCCTTATTTCTGAACTAATTAAAAGCCATTGTTTACAACAGATGTGCTAAAAATTTATCATTATTCAGGCCTTCAGGGTTAACACGACACCAAGGTTTGTGTGCACTCACAAGCCTCGGTTGGAGACCATAATACTTGCCCAGAAAAAACAGAAAATTGTTTATTTGAGAGAGAATGTAGAGAATCGTTTTCTGTGAATGTGTGTTTATGAAAAATGGAAGGGAGGTATTTATAGGAGAGCTGCAACAACCATAAACGACTAGTAGTGGAGTAGTGGGTGGTTACCACGTTTACTGGGTAATTATGGGGCAGTTAAAACAACATTTAGTGGGGGTTAATGGTACAGTTACGGGATTAGTTGTTGATTAATTATTTCTACCCGTTAG

Coding sequence (CDS)

ATGGCTTCCTCCACTCTTTCATCTGCCACCCCGTCTCAGCTATGTTCGAGCAAGAATGGAATGTTCGCACCATCTTTAGCTTTGGCGAAAGCGGGTAGAGTGAATGTGTTGATTAGTAAGGAAAGAATACGAGGGATGAAGCTGACATGCCAAGCTACTAGCATTCCAGCTGATAATGTGCCTGACATGCAAAAAAGAGAGACATTGAATTTGTTGTTGTTGGGTGCTCTTTCTCTTCCTACTGGTTATATGTTGCTTCCTTATGCATCCTTCTTTGTTCCTCCTGGTGGAGGAGCTGGCACTGGTGGAACCATCGCCAAGGATGCTCTAGGAAATGATGTAATTGCTGCTGAATGGCTCAAGACCCATGCACCAGGAGACCGGACCCTTACCCAAGGATTAAAGGGAGATCCAACATACTTGGTTGTGGAGAGCGACAAAACTCTTGCCACATTTGGAATAAATGCTGTCTGCACACATCTTGGATGTGTGGTGCCATTTAATGCTGCTGAGAACAAATTCATTTGTCCATGCCATGGATCCCAATACAATAACCAAGGCAGAGTTGTTCGAGGCCCTGCACCTTTGTCATTGGCATTGGCCCACTGCGATGTTGATGATGGAAAGGTGGTGTTTGTTCCATGGACTGAAACAGATTTTAGAACTGGTGAAGCACCATGGTGGTCTGCATAA

Protein sequence

MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11298.1	Spo11298.1	mRNA

Homology

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BLAST of Spo11298.1 vs. NCBI nr
Match: gi|902162314|gb|KNA06670.1| (hypothetical protein SOVF_178790 [Spinacia oleracea])

HSP 1 Score: 471.9 bits (1213), Expect = 6.600e-130
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV
Sbjct: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 231
           SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 230

[Close]

BLAST of Spo11298.1 vs. NCBI nr
Match: gi|21311|emb|CAA29590.1| (Rieske FeS-precursor [Spinacia oleracea])

HSP 1 Score: 469.5 bits (1207), Expect = 3.300e-129
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           MAS TLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV
Sbjct: 18  MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 77

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL
Sbjct: 78  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 137

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG
Sbjct: 138 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 197

Query: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 231
           SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA
Sbjct: 198 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 247

[Close]

BLAST of Spo11298.1 vs. NCBI nr
Match: gi|68067963|sp|P08980.2|UCRIA_SPIOL (RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic; AltName: Full=Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; AltName: Full=Rieske iron-sulfur protein; Short=ISP; Short=RISP; Flags: Precursor)

HSP 1 Score: 469.5 bits (1207), Expect = 3.300e-129
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           MAS TLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 231
           SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 230

[Close]

BLAST of Spo11298.1 vs. NCBI nr
Match: gi|731355768|ref|XP_010689313.1| (PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 421.0 bits (1081), Expect = 1.300e-114
Identity = 197/229 (86.03%), Postives = 219/229 (95.63%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           MASSTLSSATPSQLCSSK+G+FAPS ALAKAG+VNVL+ K R+  M+++CQATSIPADNV
Sbjct: 1   MASSTLSSATPSQLCSSKSGVFAPSSALAKAGKVNVLMGKGRVGRMRVSCQATSIPADNV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDM+KR+ LNLLLLGA+SLP+G+ML+PY +FFVPPGGG+G+GGTIAKDALGNDVIA+EWL
Sbjct: 61  PDMEKRKLLNLLLLGAISLPSGFMLVPYTNFFVPPGGGSGSGGTIAKDALGNDVIASEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           K H PGDRTLTQGLKGDPTYLVVESD+TLATFGINAVCTHLGCVVPFN+AENKFICPCHG
Sbjct: 121 KNHGPGDRTLTQGLKGDPTYLVVESDRTLATFGINAVCTHLGCVVPFNSAENKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 230
           SQYNNQGRVVRGPAPLSLALAHCDVDDGKVV VPWTETDFRTG+APWW+
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVLVPWTETDFRTGDAPWWA 229

[Close]

BLAST of Spo11298.1 vs. NCBI nr
Match: gi|802592125|ref|XP_012071411.1| (PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Jatropha curcas])

HSP 1 Score: 375.9 bits (964), Expect = 4.900e-101
Identity = 182/230 (79.13%), Postives = 202/230 (87.83%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLAL-AKAGRVNVLISKERIRGMKLTCQATSIPADN 60
           MASSTLSSATPSQLCSSK+G+F+P+ A+  K  R +++    R R M+LTCQATSIPAD 
Sbjct: 1   MASSTLSSATPSQLCSSKSGIFSPTHAMFVKPTRTHMMT---RDRAMRLTCQATSIPADR 60

Query: 61  VPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEW 120
           VPDM KR+ +NLLLLGALSLPTGYML+PY +FFVP G G   GGT+AKDALGNDVIA +W
Sbjct: 61  VPDMGKRQLMNLLLLGALSLPTGYMLVPYGAFFVPSGAGGAGGGTVAKDALGNDVIADQW 120

Query: 121 LKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCH 180
           LKTH PGDRTLTQGLKGDPTYLVVE D+TLAT+GINAVCTHLGCVVP+NAAE KFICPCH
Sbjct: 121 LKTHGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNAAEKKFICPCH 180

Query: 181 GSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 230
           GSQYN+QGRVVRGPAPLSLALAH DVDDGKVVFVPW ETDFRTGE PWW+
Sbjct: 181 GSQYNDQGRVVRGPAPLSLALAHADVDDGKVVFVPWVETDFRTGEDPWWA 227

[Close]

BLAST of Spo11298.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHF2_SPIOL (Cytochrome b6-f complex iron-sulfur subunit OS=Spinacia oleracea GN=SOVF_178790 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 4.600e-130
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV
Sbjct: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 231
           SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 230

[Close]

BLAST of Spo11298.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLD8_BETVU (Cytochrome b6-f complex iron-sulfur subunit OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206750 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 9.300e-115
Identity = 197/229 (86.03%), Postives = 219/229 (95.63%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           MASSTLSSATPSQLCSSK+G+FAPS ALAKAG+VNVL+ K R+  M+++CQATSIPADNV
Sbjct: 1   MASSTLSSATPSQLCSSKSGVFAPSSALAKAGKVNVLMGKGRVGRMRVSCQATSIPADNV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDM+KR+ LNLLLLGA+SLP+G+ML+PY +FFVPPGGG+G+GGTIAKDALGNDVIA+EWL
Sbjct: 61  PDMEKRKLLNLLLLGAISLPSGFMLVPYTNFFVPPGGGSGSGGTIAKDALGNDVIASEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           K H PGDRTLTQGLKGDPTYLVVESD+TLATFGINAVCTHLGCVVPFN+AENKFICPCHG
Sbjct: 121 KNHGPGDRTLTQGLKGDPTYLVVESDRTLATFGINAVCTHLGCVVPFNSAENKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 230
           SQYNNQGRVVRGPAPLSLALAHCDVDDGKVV VPWTETDFRTG+APWW+
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVLVPWTETDFRTGDAPWWA 229

[Close]

BLAST of Spo11298.1 vs. UniProtKB/TrEMBL
Match: A0A067KV04_JATCU (Cytochrome b6-f complex iron-sulfur subunit OS=Jatropha curcas GN=JCGZ_05119 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.400e-101
Identity = 182/230 (79.13%), Postives = 202/230 (87.83%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLAL-AKAGRVNVLISKERIRGMKLTCQATSIPADN 60
           MASSTLSSATPSQLCSSK+G+F+P+ A+  K  R +++    R R M+LTCQATSIPAD 
Sbjct: 1   MASSTLSSATPSQLCSSKSGIFSPTHAMFVKPTRTHMMT---RDRAMRLTCQATSIPADR 60

Query: 61  VPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEW 120
           VPDM KR+ +NLLLLGALSLPTGYML+PY +FFVP G G   GGT+AKDALGNDVIA +W
Sbjct: 61  VPDMGKRQLMNLLLLGALSLPTGYMLVPYGAFFVPSGAGGAGGGTVAKDALGNDVIADQW 120

Query: 121 LKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCH 180
           LKTH PGDRTLTQGLKGDPTYLVVE D+TLAT+GINAVCTHLGCVVP+NAAE KFICPCH
Sbjct: 121 LKTHGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNAAEKKFICPCH 180

Query: 181 GSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 230
           GSQYN+QGRVVRGPAPLSLALAH DVDDGKVVFVPW ETDFRTGE PWW+
Sbjct: 181 GSQYNDQGRVVRGPAPLSLALAHADVDDGKVVFVPWVETDFRTGEDPWWA 227

[Close]

BLAST of Spo11298.1 vs. UniProtKB/TrEMBL
Match: A0A078BEF6_MALDO (Cytochrome b6-f complex iron-sulfur subunit OS=Malus domestica GN=cyt b6f PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.200e-100
Identity = 176/229 (76.86%), Postives = 200/229 (87.34%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           MASSTLS AT SQLCSSK+ MF+ +   A  G+   ++ K +  GM++TCQA SI AD V
Sbjct: 1   MASSTLSPATTSQLCSSKSAMFSSAQGFAVKGKRTQMMGKGK--GMRVTCQAASISADRV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDM+KR+ +NLLLLGA+SLP+G+ML+PYA+FF PPG G+G+GG +AKDALGNDVIAAEWL
Sbjct: 61  PDMEKRKLMNLLLLGAISLPSGFMLVPYATFFAPPGSGSGSGGQVAKDALGNDVIAAEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           KTH PGDRTLTQGLKGDPTYLVVE DKTLAT+GINAVCTHLGCVVPFN AENKFICPCHG
Sbjct: 121 KTHGPGDRTLTQGLKGDPTYLVVEKDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 230
           SQYN+QGRVVRGPAPLSLALAH D+DDGKV+FVPW ETDFRTGE PWWS
Sbjct: 181 SQYNDQGRVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGEDPWWS 227

[Close]

BLAST of Spo11298.1 vs. UniProtKB/TrEMBL
Match: B7FGU7_MEDTR (Cytochrome b6-f complex iron-sulfur subunit OS=Medicago truncatula GN=MTR_2g089510 PE=2 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.900e-100
Identity = 180/231 (77.92%), Postives = 197/231 (85.28%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           M+S+TLS ATPSQLCS K+G+  PS+ L        +I K +  GM +TCQAT IPAD V
Sbjct: 1   MSSTTLSPATPSQLCSGKSGISCPSIGLLVKPTRTQMIGKGK--GMSITCQATGIPADRV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDM KRETLNLLLLGALSLPT  ML+PY SF VPPG G+ TGGT+AKDA+GNDV+AAEWL
Sbjct: 61  PDMSKRETLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVAAEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           K+H PGDRTLTQGLKGDPTYLVVESD+TLATF INAVCTHLGCVVPFN AE KFICPCHG
Sbjct: 121 KSHGPGDRTLTQGLKGDPTYLVVESDRTLATFAINAVCTHLGCVVPFNQAEKKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCD--VDDGKVVFVPWTETDFRTGEAPWWS 230
           SQYN+QGRVVRGPAPLSLALAHCD  VDDGKVVFVPW ETDFRTG+APWWS
Sbjct: 181 SQYNDQGRVVRGPAPLSLALAHCDVGVDDGKVVFVPWVETDFRTGDAPWWS 229

[Close]

BLAST of Spo11298.1 vs. ExPASy Swiss-Prot
Match: UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2)

HSP 1 Score: 469.5 bits (1207), Expect = 2.000e-131
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           MAS TLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 231
           SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA 230

[Close]

BLAST of Spo11298.1 vs. ExPASy Swiss-Prot
Match: UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.400e-102
Identity = 179/231 (77.49%), Postives = 198/231 (85.71%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
           M+S+TLS  TPSQLCS K+G+  PS+AL        +  +   +GMK+TCQATSIPAD V
Sbjct: 1   MSSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGN-KGMKITCQATSIPADRV 60

Query: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
           PDM KR+TLNLLLLGALSLPT  ML+PY SF VPPG G+ TGGT+AKDA+GNDV+A EWL
Sbjct: 61  PDMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWL 120

Query: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
           KTHAPGDRTLTQGLKGDPTYLVVE D+TLATF INAVCTHLGCVVPFN AENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHG 180

Query: 181 SQYNNQGRVVRGPAPLSLALAHCD--VDDGKVVFVPWTETDFRTGEAPWWS 230
           SQYN+QGRVVRGPAPLSLALAHCD  V+DGKVVFVPW ETDFRTG+APWWS
Sbjct: 181 SQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230

[Close]

BLAST of Spo11298.1 vs. ExPASy Swiss-Prot
Match: UCRIA_ARATH (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana GN=petC PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.500e-97
Identity = 177/232 (76.29%), Postives = 204/232 (87.93%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLAL-AKAGRVN-VLISKERIRGMKLTCQATSIPAD 60
           MASS+LS AT  QL SS++ + A S  L  K  ++N  ++ KE+I G++++CQA+SIPAD
Sbjct: 1   MASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKI-GLRISCQASSIPAD 60

Query: 61  NVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAE 120
            VPDM+KR+TLNLLLLGALSLPTGYML+PYA+FFVPPG G G GGT AKDALGNDV+AAE
Sbjct: 61  RVPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAE 120

Query: 121 WLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPC 180
           WLKTH PGDRTLTQGLKGDPTYLVVE+DKTLAT+GINAVCTHLGCVVP+N AENKF+CPC
Sbjct: 121 WLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPC 180

Query: 181 HGSQYNNQGRVVRGPAPLSLALAHCDVDD-GKVVFVPWTETDFRTGEAPWWS 230
           HGSQYN QGRVVRGPAPLSLALAH D+D+ GKV+FVPW ETDFRTG+APWWS
Sbjct: 181 HGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229

[Close]

BLAST of Spo11298.1 vs. ExPASy Swiss-Prot
Match: UCRIB_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum GN=petC2 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.100e-95
Identity = 177/232 (76.29%), Postives = 198/232 (85.34%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLALA-KAGRVNVL-ISKERIRGMKLTCQATSIPAD 60
           MASSTLS  T  QLCSSK+G+ + S  L  K  ++N   + K++   MK+ C ATSIPAD
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLLKPMKINSHGLGKDK--RMKVKCMATSIPAD 60

Query: 61  N-VPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAA 120
           + VPDM+KR  +NLLLLGALSLPT  ML+PYA+FF PPG G G+GGT AKDALGNDVIA+
Sbjct: 61  DRVPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIAS 120

Query: 121 EWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICP 180
           EWLKTH PG+RTLTQGLKGDPTYLVVE+D TLAT+GINAVCTHLGCVVPFNAAENKFICP
Sbjct: 121 EWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICP 180

Query: 181 CHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 230
           CHGSQYNNQGRVVRGPAPLSLALAH D+DDGKVVFVPW ETDFRTGEAPWW+
Sbjct: 181 CHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWWA 228

[Close]

BLAST of Spo11298.1 vs. ExPASy Swiss-Prot
Match: UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 4.000e-95
Identity = 176/232 (75.86%), Postives = 197/232 (84.91%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLAL-AKAGRVNVL-ISKERIRGMKLTCQATSIPAD 60
           MASSTLS  T  QLCSSK+G+ + S  L  K  ++N   + K++   MK+ C ATSIPAD
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMKINSHGLGKDK--RMKVKCMATSIPAD 60

Query: 61  N-VPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAA 120
           + VPDM+KR  +NLLLLGALSLPT  ML+PY +FFVPPG G G+GGT AKDALGNDVIA+
Sbjct: 61  DRVPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIAS 120

Query: 121 EWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICP 180
           EWLKTH PG+RTLTQGLKGDPTYLVVE+D TLAT+GINAVCTHLGCVVPFNAAENKFICP
Sbjct: 121 EWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICP 180

Query: 181 CHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 230
           CHGSQYNNQGRVVRGPAPLSLALAH D+DDGKVVFVPW ETDFRTGE PWW+
Sbjct: 181 CHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228

[Close]

BLAST of Spo11298.1 vs. TAIR (Arabidopsis)
Match: AT4G03280.1 (photosynthetic electron transfer C)

HSP 1 Score: 356.3 bits (913), Expect = 1.400e-98
Identity = 177/232 (76.29%), Postives = 204/232 (87.93%), Query Frame = 1


		  
Query: 1   MASSTLSSATPSQLCSSKNGMFAPSLAL-AKAGRVN-VLISKERIRGMKLTCQATSIPAD 60
           MASS+LS AT  QL SS++ + A S  L  K  ++N  ++ KE+I G++++CQA+SIPAD
Sbjct: 1   MASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKI-GLRISCQASSIPAD 60

Query: 61  NVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAE 120
            VPDM+KR+TLNLLLLGALSLPTGYML+PYA+FFVPPG G G GGT AKDALGNDV+AAE
Sbjct: 61  RVPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAE 120

Query: 121 WLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPC 180
           WLKTH PGDRTLTQGLKGDPTYLVVE+DKTLAT+GINAVCTHLGCVVP+N AENKF+CPC
Sbjct: 121 WLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPC 180

Query: 181 HGSQYNNQGRVVRGPAPLSLALAHCDVDD-GKVVFVPWTETDFRTGEAPWWS 230
           HGSQYN QGRVVRGPAPLSLALAH D+D+ GKV+FVPW ETDFRTG+APWWS
Sbjct: 181 HGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229

[Close]

BLAST of Spo11298.1 vs. TAIR (Arabidopsis)
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 55.1 bits (131), Expect = 6.800e-8
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 1


		  
Query: 157 VCTHLGCVVPFNAAE-NKFICPCHGSQYNNQGRVVRGPAPLSL 199
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 214 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 256

[Close]

BLAST of Spo11298.1 vs. TAIR (Arabidopsis)
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 55.1 bits (131), Expect = 6.800e-8
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 1


		  
Query: 157 VCTHLGCVVPFNAAE-NKFICPCHGSQYNNQGRVVRGPAPLSL 199
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 216 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 258

The following BLAST results are available for this feature:

BLAST of Spo11298.1 vs. NCBI nr
BLAST of Spo11298.1 vs. UniProtKB/TrEMBL
BLAST of Spo11298.1 vs. ExPASy Swiss-Prot
BLAST of Spo11298.1 vs. TAIR (Arabidopsis)

BLAST of Spo11298.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902162314\|gb\|KNA06670.1\|	6.6e-130	100.	hypothetical protein SOVF_1787...	[more]
gi\|21311\|emb\|CAA29590.1\|	3.3e-129	99.5	Rieske FeS-precursor [Spinacia...	[more]
gi\|68067963\|sp\|P08980.2\|UCRIA_SPIOL	3.3e-129	99.5	RecName: Full=Cytochrome b6-f ...	[more]
gi\|731355768\|ref\|XP_010689313.1\|	1.3e-114	86.0	PREDICTED: cytochrome b6-f com...	[more]
gi\|802592125\|ref\|XP_012071411.1\|	4.9e-101	79.1	PREDICTED: cytochrome b6-f com...	[more]

BLAST of Spo11298.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QHF2_SPIOL	4.6e-130	100.	Cytochrome b6-f complex iron-s...	[more]
A0A0J8BLD8_BETVU	9.3e-115	86.0	Cytochrome b6-f complex iron-s...	[more]
A0A067KV04_JATCU	3.4e-101	79.1	Cytochrome b6-f complex iron-s...	[more]
A0A078BEF6_MALDO	2.2e-100	76.8	Cytochrome b6-f complex iron-s...	[more]
B7FGU7_MEDTR	4.9e-100	77.9	Cytochrome b6-f complex iron-s...	[more]

BLAST of Spo11298.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
UCRIA_SPIOL	2.0e-131	99.5	Cytochrome b6-f complex iron-s...	[more]
UCRIA_PEA	4.4e-102	77.4	Cytochrome b6-f complex iron-s...	[more]
UCRIA_ARATH	2.5e-97	76.2	Cytochrome b6-f complex iron-s...	[more]
UCRIB_TOBAC	1.1e-95	76.2	Cytochrome b6-f complex iron-s...	[more]
UCRIA_TOBAC	4.0e-95	75.8	Cytochrome b6-f complex iron-s...	[more]

BLAST of Spo11298.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G03280.1	1.4e-98	76.2	photosynthetic electron transf...	[more]
AT5G13430.1	6.8e-8	53.4	Ubiquinol-cytochrome C reducta...	[more]
AT5G13440.1	6.8e-8	53.4	Ubiquinol-cytochrome C reducta...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 153..164 score: 1.3E-14coord: 174..186 score: 1.3E-14coord: 186..198 score: 1.3
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..214 score: 2.1E
IPR014909	Cytochrome b6-f complex Fe-S subunit	PFAM	PF08802	CytB6-F_Fe-S	coord: 58..96 score: 5.0
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	GENE3D	2.102.10.10		coord: 61..228 score: 8.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 134..198 score: 3.1
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROFILE	PS51296	RIESKE	coord: 116..212 score: 22
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	unknown	SSF50022	ISP domain	coord: 58..228 score: 3.55
IPR023960	Cytochrome b6-f complex iron-sulfur subunit	HAMAP	MF_01335	Cytb6_f_Rieske	coord: 52..230 score: 38
None	No IPR available	PANTHER	PTHR10134:SF5	CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTIC	coord: 1..214 score: 2.1E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009595	detection of biotic stimulus
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009409	response to cold
biological_process	GO:0010200	response to chitin
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0043900	regulation of multi-organism process
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0009657	plastid organization
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0046028	electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009496	plastoquinol--plastocyanin reductase activity
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
molecular_function	GO:0016168	chlorophyll binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17046	0.72	Barchart \| Table
Spo22090	0.67	Barchart \| Table
Spo10537	0.66	Barchart \| Table
Spo19731	0.66	Barchart \| Table
Spo10529	0.65	Barchart \| Table