Spo11345 (gene) | SpinachBase

Overview


Name	Spo11345
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Sterol carrier protein, putative
Location	SpoScf_03671 : 6369 .. 7542 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTCTAGGAGTCAAGGACAGGTTGGGATGCGTGCCTTAATCACTCTGTCTTATTCGTAGTTCGTGCATTTACCGCTTTCACTTTGGTAGTTAGAAGATCCCAAGTTCTCAACCCCGTTTTCCCACACTTTCAGCGTTCCTCCTTTTCTCTGGGAAGTCTCTTTTACACTTCTTTGCGGCATTTCGTCGAACACAAAGATGGCCGACTCAGATCAGCAGCTGAAATCCGATGCTTTGTTGGAACAAATGAAAACCCACCTCACTACTGATGCTGGGAAAGAGACCATCAAGAAAGTTGGCCTCGTTTATCAGCTCAACATCGCCCCTAAGGTAAAAATTTTCATGATTTTTATGATATTTTCTTATGGTTTTCCAAGTTTTCTTAAATTGGTAGAATTCGGATCAGTTTTTTGATGTGGGGTTTCCCTGAATTGGCAGAAATTGGGGTTTAATGAAGTGATTTACACGGTTGATCTTAAGAAGGGAGAGGTTAAGAAAGGTTAGGGTTTCATGATCATATTTATTGTTGTTTTGGACGCTAAATTTGTTGAATTTCAATTGCCAATTTCTTCAATTTGTGGATAATTCAGGGGCTTATGAAGGAGGAAAGCCAGATGCAACATTTTCTTTCAAGGATGAGGATTTCCTTAAGATTGCAACAGGAAAAATGAACCCTCAAATTGCTTTCATGAGGGGTGCAATGAAGATTAAGGGTAGTATAAGTGCTGCCCAGAAATTCACTCCTGATATTTTCCCTAAGCCTGCTAAGCTGTGATCTGTTCCATCGTTTCGGATGCAGGAACATGTTCTGGTGTGCAACAAATTTCTACACAACAGAAAGATAGTAGTTATATATAAAAGTTAGTTTAGGGAATATTAATGTTATGAATCAGGTCATACATTGTTGTTTGTAAGATTCCTGATTCTTTGTGAAACTTGTGGGCTTTTTTTCTCTGTACTTGCAACTTTCTAATGAATAAAATCCGTCTTGATTTGGGCACTTATCTTCCTTAGTTTCAGTTCCTTCTATAATTGTGTACATTGCAGCTTTTGTGTTGCTAGATGGTTTGGTTGAGCTTCTATTCTACTGGATAATTAAAGTAGTTGTGCACTTGTGTGTAAATAATGAATAGCTTTCTTCAGTTCTACAACTGAGTGATTGATGAAATGGCAA

mRNA sequence

ACCTCTAGGAGTCAAGGACAGGTTGGGATGCGTGCCTTAATCACTCTGTCTTATTCGTAGTTCGTGCATTTACCGCTTTCACTTTGGTAGTTAGAAGATCCCAAGTTCTCAACCCCGTTTTCCCACACTTTCAGCGTTCCTCCTTTTCTCTGGGAAGTCTCTTTTACACTTCTTTGCGGCATTTCGTCGAACACAAAGATGGCCGACTCAGATCAGCAGCTGAAATCCGATGCTTTGTTGGAACAAATGAAAACCCACCTCACTACTGATGCTGGGAAAGAGACCATCAAGAAAGTTGGCCTCGTTTATCAGCTCAACATCGCCCCTAAGAAATTGGGGTTTAATGAAGTGATTTACACGGTTGATCTTAAGAAGGGAGAGGTTAAGAAAGGGGCTTATGAAGGAGGAAAGCCAGATGCAACATTTTCTTTCAAGGATGAGGATTTCCTTAAGATTGCAACAGGAAAAATGAACCCTCAAATTGCTTTCATGAGGGGTGCAATGAAGATTAAGGGTAGTATAAGTGCTGCCCAGAAATTCACTCCTGATATTTTCCCTAAGCCTGCTAAGCTGTGATCTGTTCCATCGTTTCGGATGCAGGAACATGTTCTGGTGTGCAACAAATTTCTACACAACAGAAAGATAGTAGTTATATATAAAAGTTAGTTTAGGGAATATTAATGTTATGAATCAGGTCATACATTGTTGTTTGTAAGATTCCTGATTCTTTGTGAAACTTGTGGGCTTTTTTTCTCTGTACTTGCAACTTTCTAATGAATAAAATCCGTCTTGATTTGGGCACTTATCTTCCTTAGTTTCAGTTCCTTCTATAATTGTGTACATTGCAGCTTTTGTGTTGCTAGATGGTTTGGTTGAGCTTCTATTCTACTGGATAATTAAAGTAGTTGTGCACTTGTGTGTAAATAATGAATAGCTTTCTTCAGTTCTACAACTGAGTGATTGATGAAATGGCAA

Coding sequence (CDS)

ATGGCCGACTCAGATCAGCAGCTGAAATCCGATGCTTTGTTGGAACAAATGAAAACCCACCTCACTACTGATGCTGGGAAAGAGACCATCAAGAAAGTTGGCCTCGTTTATCAGCTCAACATCGCCCCTAAGAAATTGGGGTTTAATGAAGTGATTTACACGGTTGATCTTAAGAAGGGAGAGGTTAAGAAAGGGGCTTATGAAGGAGGAAAGCCAGATGCAACATTTTCTTTCAAGGATGAGGATTTCCTTAAGATTGCAACAGGAAAAATGAACCCTCAAATTGCTTTCATGAGGGGTGCAATGAAGATTAAGGGTAGTATAAGTGCTGCCCAGAAATTCACTCCTGATATTTTCCCTAAGCCTGCTAAGCTGTGA

Protein sequence

MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKGEVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFPKPAKL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11345.1	Spo11345.1	mRNA

Homology

[Close]

BLAST of Spo11345.1 vs. NCBI nr
Match: gi|902216949|gb|KNA17567.1| (hypothetical protein SOVF_078760 [Spinacia oleracea])

HSP 1 Score: 248.8 bits (634), Expect = 4.900e-63
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG
Sbjct: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP
Sbjct: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KPAKL
Sbjct: 121 KPAKL 125

[Close]

BLAST of Spo11345.1 vs. NCBI nr
Match: gi|731370569|ref|XP_010665761.1| (PREDICTED: non-specific lipid-transfer protein-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 238.8 bits (608), Expect = 5.100e-60
Identity = 118/125 (94.40%), Postives = 122/125 (97.60%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MADSDQQLKSDALLEQMK HLTTDAGKET KK+GLVYQL+IAPKK+GFNEVIYTVDLKKG
Sbjct: 1   MADSDQQLKSDALLEQMKIHLTTDAGKETTKKIGLVYQLHIAPKKIGFNEVIYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EVKKGAYEGGKPDA FSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP
Sbjct: 61  EVKKGAYEGGKPDAAFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KPAK+
Sbjct: 121 KPAKM 125

[Close]

BLAST of Spo11345.1 vs. NCBI nr
Match: gi|697156052|ref|XP_009586774.1| (PREDICTED: non-specific lipid-transfer protein-like [Nicotiana tomentosiformis])

HSP 1 Score: 218.0 bits (554), Expect = 9.300e-54
Identity = 104/125 (83.20%), Postives = 115/125 (92.00%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MAD+  QLKSDA+ EQMK HLTTDAGK  IKK+GLVYQ+NIAPKK+GFNE +Y VDLKKG
Sbjct: 1   MADNSTQLKSDAIFEQMKLHLTTDAGKALIKKIGLVYQINIAPKKIGFNEKVYVVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           E K+G YEGGKPDATFSFKD+DF+KIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP
Sbjct: 61  ETKEGPYEGGKPDATFSFKDDDFVKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KP+K+
Sbjct: 121 KPSKM 125

[Close]

BLAST of Spo11345.1 vs. NCBI nr
Match: gi|1012198262|ref|XP_015972470.1| (PREDICTED: peroxisomal multifunctional enzyme type 2 [Arachis duranensis])

HSP 1 Score: 213.4 bits (542), Expect = 2.300e-52
Identity = 101/125 (80.80%), Postives = 114/125 (91.20%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MA     LKSDAL++QMK HL+TDAGKE +KK+GLVYQ+ IAPKK+G+NEVIYTVDLKKG
Sbjct: 1   MASESVTLKSDALMDQMKQHLSTDAGKEIVKKIGLVYQIQIAPKKIGYNEVIYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EV KG YEGGKPDATFSFKDEDF+K+A GKMNPQ+AFMRGAMKIKGS+SAAQKFTPDIFP
Sbjct: 61  EVTKGPYEGGKPDATFSFKDEDFVKVALGKMNPQLAFMRGAMKIKGSLSAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KPAK+
Sbjct: 121 KPAKM 125

[Close]

BLAST of Spo11345.1 vs. NCBI nr
Match: gi|351725429|ref|NP_001237092.1| (uncharacterized protein LOC100500120 [Glycine max])

HSP 1 Score: 213.0 bits (541), Expect = 3.000e-52
Identity = 101/125 (80.80%), Postives = 114/125 (91.20%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MADS   LKSDA++EQMK HL TDAGK+   K+GLVYQ +IAPKKLGF+EV+YTVDLKKG
Sbjct: 1   MADSSSNLKSDAIMEQMKQHLATDAGKQVTNKIGLVYQFHIAPKKLGFDEVVYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EV KG+YEGGKPDA+FSFKDEDF+K+A GKMNPQIAFMRGAMKIKGS+SAAQKFTPDIFP
Sbjct: 61  EVTKGSYEGGKPDASFSFKDEDFVKVALGKMNPQIAFMRGAMKIKGSLSAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KP+KL
Sbjct: 121 KPSKL 125

[Close]

BLAST of Spo11345.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFC6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_078760 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.400e-63
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG
Sbjct: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP
Sbjct: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KPAKL
Sbjct: 121 KPAKL 125

[Close]

BLAST of Spo11345.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9C6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g201530 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.500e-60
Identity = 118/125 (94.40%), Postives = 122/125 (97.60%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MADSDQQLKSDALLEQMK HLTTDAGKET KK+GLVYQL+IAPKK+GFNEVIYTVDLKKG
Sbjct: 1   MADSDQQLKSDALLEQMKIHLTTDAGKETTKKIGLVYQLHIAPKKIGFNEVIYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EVKKGAYEGGKPDA FSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP
Sbjct: 61  EVKKGAYEGGKPDAAFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KPAK+
Sbjct: 121 KPAKM 125

[Close]

BLAST of Spo11345.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PYI2_GLYSO (Peroxisomal multifunctional enzyme type 2 OS=Glycine soja GN=glysoja_008746 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.100e-52
Identity = 101/125 (80.80%), Postives = 114/125 (91.20%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MADS   LKSDA++EQMK HL TDAGK+   K+GLVYQ +IAPKKLGF+EV+YTVDLKKG
Sbjct: 1   MADSSSNLKSDAIMEQMKQHLATDAGKQVTNKIGLVYQFHIAPKKLGFDEVVYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EV KG+YEGGKPDA+FSFKDEDF+K+A GKMNPQIAFMRGAMKIKGS+SAAQKFTPDIFP
Sbjct: 61  EVTKGSYEGGKPDASFSFKDEDFVKVALGKMNPQIAFMRGAMKIKGSLSAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KP+KL
Sbjct: 121 KPSKL 125

[Close]

BLAST of Spo11345.1 vs. UniProtKB/TrEMBL
Match: C6T0J9_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.100e-52
Identity = 101/125 (80.80%), Postives = 114/125 (91.20%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MADS   LKSDA++EQMK HL TDAGK+   K+GLVYQ +IAPKKLGF+EV+YTVDLKKG
Sbjct: 1   MADSSSNLKSDAIMEQMKQHLATDAGKQVTNKIGLVYQFHIAPKKLGFDEVVYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EV KG+YEGGKPDA+FSFKDEDF+K+A GKMNPQIAFMRGAMKIKGS+SAAQKFTPDIFP
Sbjct: 61  EVTKGSYEGGKPDASFSFKDEDFVKVALGKMNPQIAFMRGAMKIKGSLSAAQKFTPDIFP 120

Query: 121 KPAKL 126
           KP+KL
Sbjct: 121 KPSKL 125

[Close]

BLAST of Spo11345.1 vs. UniProtKB/TrEMBL
Match: A0A067GWW6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033240mg PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.100e-52
Identity = 101/125 (80.80%), Postives = 117/125 (93.60%), Query Frame = 1

		  
Query: 1   MADSDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKG 60
           MADS Q LKSDALLEQMK HL+TDAGK  +KK+GLVYQ+NIAPKK+GF+EV YTVDLKKG
Sbjct: 1   MADSTQ-LKSDALLEQMKQHLSTDAGKAVVKKLGLVYQINIAPKKMGFDEVTYTVDLKKG 60

Query: 61  EVKKGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFP 120
           EV KG+YEGGKPDATF+FKD+DF+K+ATGKMNPQIAFMRG MK+KGS+SAAQKFTPD+FP
Sbjct: 61  EVTKGSYEGGKPDATFTFKDDDFVKVATGKMNPQIAFMRGLMKVKGSLSAAQKFTPDLFP 120

Query: 121 KPAKL 126
           KP+K+
Sbjct: 121 KPSKM 124

[Close]

BLAST of Spo11345.1 vs. ExPASy Swiss-Prot
Match: NLTP1_CAEEL (Non-specific lipid-transfer protein-like 1 OS=Caenorhabditis elegans GN=nlt-1 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.300e-12
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 1

		  
Query: 9   KSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKGEVKKGAYE 68
           KSD + E++K  + TD  KE +KKVG  +++ IA    G  +V +T+D K      G   
Sbjct: 4   KSDVIFEEIKERIATD--KEMVKKVGTSFRMTIAGAD-GKTKV-WTIDAKSDTPYVGDDS 63

Query: 69  GGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFPKPAK 125
               +   + KD DF+ IA GKM P  AFM+G MK+KG+I+ A K    + PK  K
Sbjct: 64  SRPVEIEINIKDSDFIAIAAGKMKPDQAFMQGKMKLKGNIAKAMKLRTILDPKMLK 115

[Close]

BLAST of Spo11345.1 vs. ExPASy Swiss-Prot
Match: MFEA_DICDI (Peroxisomal multifunctional enzyme A OS=Dictyostelium discoideum GN=mfeA PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.400e-9
Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = 1

		  
Query: 26  GKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKGEVKKGAYEGG-KPDATFSFKDEDFL 85
           G E +KK+  +Y +NI   K G N   + +DLK G        G  KP+ T +  DEDF+
Sbjct: 346 GAELVKKINGIYLINI---KKGTNTQAWALDLKNGSGSIVVGAGSTKPNVTITVSDEDFV 405

Query: 86  KIATGKMNPQIAFMRGAMKIKGSISAAQK 114
            I TGK+N Q AF +G +KI G++  A K
Sbjct: 406 DIMTGKLNAQSAFTKGKLKISGNMGLATK 431

[Close]

BLAST of Spo11345.1 vs. ExPASy Swiss-Prot
Match: NLTP_BOVIN (Non-specific lipid-transfer protein OS=Bos taurus GN=SCP2 PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 2.400e-9
Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = 1

		  
Query: 9   KSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKGEVKKGAYE 68
           K++ + ++++  L  D G++ +KK+G ++   +     G  E  + VD+K G+       
Sbjct: 428 KANLVFKEIEKKLE-DEGEQFVKKIGGIFAFKVKDGP-GGKEATWVVDVKNGKGSVLPNS 487

Query: 69  GGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKF-TPDIFPKPAKL 126
             K D T +  D D L + TGKMNPQ AF +G +KI G++  A K     + P  AKL
Sbjct: 488 DKKADCTITMADSDLLALMTGKMNPQTAFFQGKLKINGNMGLAMKLQNLQLQPGKAKL 543

[Close]

BLAST of Spo11345.1 vs. ExPASy Swiss-Prot
Match: NLTP_HUMAN (Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 3.100e-9
Identity = 34/105 (32.38%), Postives = 58/105 (55.24%), Query Frame = 1

		  
Query: 9   KSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKGEVKKGAYE 68
           K++ + ++++  L  + G++ +KK+G ++   +     G  E  + VD+K G+       
Sbjct: 432 KANLVFKEIEKKLEEE-GEQFVKKIGGIFAFKVKDGP-GGKEATWVVDVKNGKGSVLPNS 491

Query: 69  GGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQK 114
             K D T +  D DFL + TGKMNPQ AF +G +KI G++  A K
Sbjct: 492 DKKADCTITMADSDFLALMTGKMNPQSAFFQGKLKITGNMGLAMK 534

[Close]

BLAST of Spo11345.1 vs. ExPASy Swiss-Prot
Match: HSDL2_XENTR (Hydroxysteroid dehydrogenase-like protein 2 OS=Xenopus tropicalis GN=hsdl2 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.500e-6
Identity = 35/100 (35.00%), Postives = 52/100 (52.00%), Query Frame = 1

		  
Query: 27  KETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKGEVKKGAYEGG-KPDATFSFKDEDFLK 86
           +E +K    +YQ  ++ ++ G     + +DLK G+   G+ E   K D   S    DF+K
Sbjct: 322 EEAVKTTQGIYQFVLSGEESGN----WFLDLKNGKGGVGSGEPSTKADVVMSMDSGDFIK 381

Query: 87  IATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFPKPAKL 126
           + TGKM P +AFM G +KIKG +  A K    +    AKL
Sbjct: 382 MFTGKMKPTMAFMSGKLKIKGDMGLALKLEKILGQMNAKL 417

[Close]

BLAST of Spo11345.1 vs. TAIR (Arabidopsis)
Match: AT5G42890.1 (sterol carrier protein 2)

HSP 1 Score: 201.1 bits (510), Expect = 4.100e-52
Identity = 95/122 (77.87%), Postives = 111/122 (90.98%), Query Frame = 1

		  
Query: 4   SDQQLKSDALLEQMKTHLTTDAGKETIKKVGLVYQLNIAPKKLGFNEVIYTVDLKKGEVK 63
           ++ QLKSDA+++ MK HL+TDAGKE  +K+GLVYQ+NIAPKKLGF EV Y VDLKKGEV 
Sbjct: 2   ANTQLKSDAIMDMMKEHLSTDAGKEVTEKIGLVYQINIAPKKLGFEEVTYIVDLKKGEVT 61

Query: 64  KGAYEGGKPDATFSFKDEDFLKIATGKMNPQIAFMRGAMKIKGSISAAQKFTPDIFPKPA 123
           KG YEGGK DATFSFKD+DF+K+ATGKMNPQ+AF+RGAMKIKGS+SAAQKFTPDIFPKP+
Sbjct: 62  KGKYEGGKVDATFSFKDDDFVKVATGKMNPQMAFIRGAMKIKGSLSAAQKFTPDIFPKPS 121

Query: 124 KL 126
           KL
Sbjct: 122 KL 123

The following BLAST results are available for this feature:

BLAST of Spo11345.1 vs. NCBI nr
BLAST of Spo11345.1 vs. UniProtKB/TrEMBL
BLAST of Spo11345.1 vs. ExPASy Swiss-Prot
BLAST of Spo11345.1 vs. TAIR (Arabidopsis)

BLAST of Spo11345.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902216949\|gb\|KNA17567.1\|	4.9e-63	100.	hypothetical protein SOVF_0787...	[more]
gi\|731370569\|ref\|XP_010665761.1\|	5.1e-60	94.4	PREDICTED: non-specific lipid-...	[more]
gi\|697156052\|ref\|XP_009586774.1\|	9.3e-54	83.2	PREDICTED: non-specific lipid-...	[more]
gi\|1012198262\|ref\|XP_015972470.1\|	2.3e-52	80.8	PREDICTED: peroxisomal multifu...	[more]
gi\|351725429\|ref\|NP_001237092.1\|	3.0e-52	80.8	uncharacterized protein LOC100...	[more]

BLAST of Spo11345.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RFC6_SPIOL	3.4e-63	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B9C6_BETVU	3.5e-60	94.4	Uncharacterized protein OS=Bet...	[more]
A0A0B2PYI2_GLYSO	2.1e-52	80.8	Peroxisomal multifunctional en...	[more]
C6T0J9_SOYBN	2.1e-52	80.8	Uncharacterized protein OS=Gly...	[more]
A0A067GWW6_CITSI	6.1e-52	80.8	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo11345.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
NLTP1_CAEEL	2.3e-12	38.7	Non-specific lipid-transfer pr...	[more]
MFEA_DICDI	1.4e-9	40.4	Peroxisomal multifunctional en...	[more]
NLTP_BOVIN	2.4e-9	32.2	Non-specific lipid-transfer pr...	[more]
NLTP_HUMAN	3.1e-9	32.3	Non-specific lipid-transfer pr...	[more]
HSDL2_XENTR	1.5e-6	35.0	Hydroxysteroid dehydrogenase-l...	[more]

BLAST of Spo11345.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT5G42890.1	4.1e-52	77.8	sterol carrier protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003033	SCP2 sterol-binding domain	GENE3D	3.30.1050.10		coord: 4..118 score: 1.2
IPR003033	SCP2 sterol-binding domain	PFAM	PF02036	SCP2	coord: 14..115 score: 1.1
IPR003033	SCP2 sterol-binding domain	unknown	SSF55718	SCP-like	coord: 7..122 score: 3.77
None	No IPR available	PANTHER	PTHR10094	STEROL CARRIER PROTEIN 2 SCP-2 FAMILY PROTEIN	coord: 7..125 score: 6.1
None	No IPR available	PANTHER	PTHR10094:SF17	SUBFAMILY NOT NAMED	coord: 7..125 score: 6.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0009686	gibberellin biosynthetic process
biological_process	GO:0046487	glyoxylate metabolic process
biological_process	GO:0032365	intracellular lipid transport
biological_process	GO:0007031	peroxisome organization
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0009845	seed germination
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0032934	sterol binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11163	0.66	Barchart \| Table