Spo11369 (gene) | SpinachBase

Overview


Name	Spo11369
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	B0616E02-H0507E05.5 protein
Location	chr6 : 45476641 .. 45479723 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCTAATCGGTATGGACTATGGTTGCCGAACGACTCAAACTCTCTAGACTTGATCAACTACTGCCCGACCCGCTGGCCAAAAAACACAAAAAGCCTGCACCAATTTTATGGGTTTGGGCATGATTTTTTGTGATAAAGTCCGGCCCGGCCCGAATTTTGATCACCTCTAAAACTCTCGCTACCCCAGAAAAAGAACCCGACCCGTTATATTCCATCCAAGCCCCAACACAAATGTACTCTAGAGTCCAGTCCATTTAAGGGCTTGCAGTTTTAGCCAGATCTAATGTTCTTTTTCGCGCCAGCCCAGCTCATTATCTCCTACAGTTTCTGTAATGTTTTACATAGAAAAACAAGATAAAATCAATCTATCCATCCAGTAACAGATAACTAGATAAGCAAACAGCCATAAATCAGAAGAAACACATCCAGATTCCAGACCATGGCTGCTCTAAGCTTCGGAGTTGCTCACTTACGCTCATTCACCACCAAATCTTTCAAGATTCCATCCACCCCCAAAATTTCATGTGTTTGGGTATTAATTACTCTTCTTTCAATTATTTCTTTCCTAATTTTCTAATTCATGTTTAAAATTTACAGAACTGAATTGAGTCATTTTTTATTTGGGGTGTTTGTATACGATTGGAAAAAGGAAGGATCCAGAAGGTGTATTCAAAACACCAGCACAAACAGGGCATTTTGCAAGACTAGATATGAAGAAAGGGATTGAGAAAGAAGCTGATGCTAAAGATGATTATGAGCGTTATTTGAAGAATGAGAAAGAACGTCGAGAAGCTCTTCGTCAGGTTTTCTTCTACTACTAGTTTACTACATTTTTCAATTTTGATCAATTTAAAATTATTTCAATTTTTGAATTTGGGTTGGATTTTGGATTCAGGCTCGGGTTATTCCGGATACGGACTCAGAGTTGATTGAGTATTTTCTTGATACTGAGGCACAGGAGATTGAGTATGAGATTGCTAGGTTGAGGCCAAGGCAAGTTCTTTTTCATTTCATTATTTGTACAATTTAATTGGTTGTAGATTAAGCTGCATAATTTTAAGTTGGTTATGTTAGTGTACTATTTTAGAATGTTCGGGAAAAGTTTTCAAGCTTCTTAGTAAAGTTTAGAATTTTAATTGAATTGTGATGAAAGAGGATCAAAGTGCCCCAATTAACCTCTTTGAACATCAATTTTTATCATCGTTAATTATAAAGGATTTGGACAATGTAACAACTAATTTCGGAAAGAGGGAGTGACTTTGATAGATGCAGGGGATAAGGAATTGATTGATTAGGAACTTTAATTAGCATAACAAGCATAACAAGAACTGTGTTGATACAAGTCACAGATGAGAAGGATAGTTGGTATAGTCAGCTATACTAACATTAAAATAATATTTTACTGTGTTTTATGTAATTGATGCATTTTCTTTTGGTACCATAGTTTGATAGATGAAGGATAGTTATATGTTCTCATTTGGTATCAAACAACATAGTTTGATATTCACAAGTCAAAGACAAATGTTTTTTTTGGTGGGTCAAACTCAATTCATTACCTGGAGTTACCATTTAGCCCTTAGTATAGGATTTAAAGACTATACCGATTATAGTATCAGAAAACCTCATGACAGATAGAAACTTGAATTATTTGGTTATTTTGGCATTGTGATGGCAACACTTTCTCTATGTGAAACAACTTTTCTTAAGGGATCATTATGAGCTCTAACCATTGACCGAAGCTAACTTCTCTATGGAAGATGTTTTATGCTATGGAATAACATCAACTTTTTGAGGAACTTGCAGATTGAATGACGGATTTTTCAAACAATTACAATCTGAATTGGGGCATCTTCGTTTTGCTATGGCGAAAACTGAGGTACTTTTCTAACCTATTTTACCATAAATAACTGATATTTAACATCCAAGTCAAGTAAATTATGATATACTGAGTGCAGGAAATGGAAGACAGGGTGTTTGAGCTCGAGGCATTGCAAAAGGCAATTTTAGAAGGAATTGGTATGTTGTTATTACTTATTATTAACCTCAGATCATTTTTGGACAGGCCTTTAAACATAAACTCATGTGTTTAACTGTTTATGTCGTTTACTGTTATGCAGAAGGATATGATAAAATGCAGAGTGAACTTGTTAAAGCAAAGGAAAGTCTAACCAAGATCTTCACATCCAAGGACGTTAACAAAACTGTATGTACTCTTTTATACATTTTTAAAAGAAACACCTTAATGAAAAACCTCTTATATGTGATTGTTCTTACCACGCAGTTATTGGATATGGTTGAGTTAAATGAGCTGAATATGTCTTTAGTCACACTTCTTGATGAGAACATAGCTAGTGCAAATCGCAGTGATCAGGTTAGTAACTGTAACCGAGTGTTTTCCATGTTAATTAGTATCTGTTAGAATAAGCGAAAATGATAAATGTCACAACTTGTGATCGTGTCACAATGATGATATGGCATGCTTATGTGTCATGATTTAAAAAGAAAACTAAAATATGAGCTGATTCGGATTTTCTGTACAGAAGCAAGCTGCGGAGTACATGGAGAAGCTTCGTGCGTCTGTTCTAAAATATGTAACAGTTTAGATTTTGAGTGATTTGTAAGAGCATTTCTTCTTTGATCATCTAATAATGTAGTGATTCCAGCTGAGCCTTTTTATATGTAAATTCAAAATTTTGTGTAAAGAAATGTTAATATTGATGATATGTTTTCGGGAGCATTCTGAGATAGTGGTAGATCATTCTGCTTTTTAACCATACAGAGTACTCCGTAGAAATTTACATGTTCTGAGGTACTGTTGTAATTAGGATTTACATCTGATCTCGAGTACAAATTTCAGTATGGACTTTGTGGAGTTATGCTAAAGGTCATAATTTAAGATAATAAACAAATTCTTTTCGATCTACTCCCTAGTCTGTGCTAGCTTGATGTTGGAAGTTCTAGTTGGAAAACAAAGAAAAGAGTTGAAAAATGAAAGGAGGGAAAATGTATCACATTGGTAGATTGCCAACTTCTTCCTTTATTTTGGGGGTTGAGTGTATTTTTTGTTGAAGGAAATGGG

mRNA sequence

ATGAGGCTAATCGATAAGCAAACAGCCATAAATCAGAAGAAACACATCCAGATTCCAGACCATGGCTGCTCTAAGCTTCGGAGTTGCTCACTTACGCTCATTCACCACCAAATCTTTCAAGATTCCATCCACCCCCAAAATTTCATGAAGGATCCAGAAGGTGTATTCAAAACACCAGCACAAACAGGGCATTTTGCAAGACTAGATATGAAGAAAGGGATTGAGAAAGAAGCTGATGCTAAAGATGATTATGAGCGTTATTTGAAGAATGAGAAAGAACGTCGAGAAGCTCTTCGTCAGGCTCGGGTTATTCCGGATACGGACTCAGAGTTGATTGAGTATTTTCTTGATACTGAGGCACAGGAGATTGAGTATGAGATTGCTAGGTTGAGGCCAAGATTGAATGACGGATTTTTCAAACAATTACAATCTGAATTGGGGCATCTTCGTTTTGCTATGGCGAAAACTGAGGAAATGGAAGACAGGGTGTTTGAGCTCGAGGCATTGCAAAAGGCAATTTTAGAAGGAATTGAAGGATATGATAAAATGCAGAGTGAACTTGTTAAAGCAAAGGAAAGTCTAACCAAGATCTTCACATCCAAGGACGTTAACAAAACTTTATTGGATATGGTTGAGTTAAATGAGCTGAATATGTCTTTAGTCACACTTCTTGATGAGAACATAGCTAGTGCAAATCGCAGTGATCAGAAGCAAGCTGCGGAGTACATGGAGAAGCTTCGTGCGTCTGTTCTAAAATATGTAACAGTTTAGATTTTGAGTGATTTGTAAGAGCATTTCTTCTTTGATCATCTAATAATGTAGTGATTCCAGCTGAGCCTTTTTATATGTAAATTCAAAATTTTGTGTAAAGAAATGTTAATATTGATGATATGTTTTCGGGAGCATTCTGAGATAGTGGTAGATCATTCTGCTTTTTAACCATACAGAGTACTCCGTAGAAATTTACATGTTCTGAGGTACTGTTGTAATTAGGATTTACATCTGATCTCGAGTACAAATTTCAGTATGGACTTTGTGGAGTTATGCTAAAGGTCATAATTTAAGATAATAAACAAATTCTTTTCGATCTACTCCCTAGTCTGTGCTAGCTTGATGTTGGAAGTTCTAGTTGGAAAACAAAGAAAAGAGTTGAAAAATGAAAGGAGGGAAAATGTATCACATTGGTAGATTGCCAACTTCTTCCTTTATTTTGGGGGTTGAGTGTATTTTTTGTTGAAGGAAATGGG

Coding sequence (CDS)

ATGAGGCTAATCGATAAGCAAACAGCCATAAATCAGAAGAAACACATCCAGATTCCAGACCATGGCTGCTCTAAGCTTCGGAGTTGCTCACTTACGCTCATTCACCACCAAATCTTTCAAGATTCCATCCACCCCCAAAATTTCATGAAGGATCCAGAAGGTGTATTCAAAACACCAGCACAAACAGGGCATTTTGCAAGACTAGATATGAAGAAAGGGATTGAGAAAGAAGCTGATGCTAAAGATGATTATGAGCGTTATTTGAAGAATGAGAAAGAACGTCGAGAAGCTCTTCGTCAGGCTCGGGTTATTCCGGATACGGACTCAGAGTTGATTGAGTATTTTCTTGATACTGAGGCACAGGAGATTGAGTATGAGATTGCTAGGTTGAGGCCAAGATTGAATGACGGATTTTTCAAACAATTACAATCTGAATTGGGGCATCTTCGTTTTGCTATGGCGAAAACTGAGGAAATGGAAGACAGGGTGTTTGAGCTCGAGGCATTGCAAAAGGCAATTTTAGAAGGAATTGAAGGATATGATAAAATGCAGAGTGAACTTGTTAAAGCAAAGGAAAGTCTAACCAAGATCTTCACATCCAAGGACGTTAACAAAACTTTATTGGATATGGTTGAGTTAAATGAGCTGAATATGTCTTTAGTCACACTTCTTGATGAGAACATAGCTAGTGCAAATCGCAGTGATCAGAAGCAAGCTGCGGAGTACATGGAGAAGCTTCGTGCGTCTGTTCTAAAATATGTAACAGTTTAG

Protein sequence

MRLIDKQTAINQKKHIQIPDHGCSKLRSCSLTLIHHQIFQDSIHPQNFMKDPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSELIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQKAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIASANRSDQKQAAEYMEKLRASVLKYVTV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11369.1	Spo11369.1	mRNA

Homology

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BLAST of Spo11369.1 vs. NCBI nr
Match: gi|902160134|gb|KNA06393.1| (hypothetical protein SOVF_181510 [Spinacia oleracea])

HSP 1 Score: 388.7 bits (997), Expect = 8.100e-105
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE
Sbjct: 32  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 91

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ
Sbjct: 92  LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 151

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS
Sbjct: 152 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 211

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           ANRSDQKQAAEYMEKLRASVLKYVTV
Sbjct: 212 ANRSDQKQAAEYMEKLRASVLKYVTV 237

[Close]

BLAST of Spo11369.1 vs. NCBI nr
Match: gi|731330549|ref|XP_010676191.1| (PREDICTED: uncharacterized protein LOC104892071 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 322.0 bits (824), Expect = 9.400e-85
Identity = 168/206 (81.55%), Postives = 189/206 (91.75%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEGVF+ P QTGH ARL+ KK +EK+++AK+ YER L+ EKERRE++RQ+RV+PDTD+E
Sbjct: 32  DPEGVFRQPPQTGHLARLEFKKRLEKDSEAKEAYERQLREEKERRESVRQSRVVPDTDTE 91

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQEIE+EIARLR RLND FFKQLQSELG LRFAMAKTE+MEDR+FELEALQ
Sbjct: 92  LIEYFLDTEAQEIEFEIARLRSRLNDNFFKQLQSELGQLRFAMAKTEDMEDRIFELEALQ 151

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KA+LEGIE YDKMQ+ELVKAK+SLTKIFTSKDVN TLLDMVE NELN SLVTLLDENIAS
Sbjct: 152 KALLEGIEAYDKMQNELVKAKQSLTKIFTSKDVNSTLLDMVEQNELNRSLVTLLDENIAS 211

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A RS+Q QAAEYMEKLR+SVLKYVTV
Sbjct: 212 AYRSNQNQAAEYMEKLRSSVLKYVTV 237

[Close]

BLAST of Spo11369.1 vs. NCBI nr
Match: gi|225426919|ref|XP_002264554.1| (PREDICTED: uncharacterized protein LOC100245386 [Vitis vinifera])

HSP 1 Score: 269.6 bits (688), Expect = 5.500e-69
Identity = 142/206 (68.93%), Postives = 173/206 (83.98%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEG+F +P  TGH ARL+ K+ +EK+ADA++ ++R++  EKERR+ALRQ+RVIPDT  E
Sbjct: 38  DPEGLFGSP-NTGHIARLEFKRRLEKDADAREAFQRHVLEEKERRQALRQSRVIPDTPEE 97

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQE E+EIAR+R RL+  FF  LQSE G LRF+++KTEEMEDR+ ELEALQ
Sbjct: 98  LIEYFLDTEAQEFEFEIARMRHRLDKDFFSHLQSERGQLRFSVSKTEEMEDRLIELEALQ 157

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KA+LEG E YDKMQ++L+ AKESLTKI TSKDV  TLL+MVE NELN SL+ LLDENIAS
Sbjct: 158 KALLEGTEAYDKMQADLITAKESLTKILTSKDVKATLLEMVEKNELNRSLLALLDENIAS 217

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A  S+QKQA  +MEKLRA+VLKY+TV
Sbjct: 218 AQSSEQKQAVAFMEKLRAAVLKYITV 242

[Close]

BLAST of Spo11369.1 vs. NCBI nr
Match: gi|147861738|emb|CAN83165.1| (hypothetical protein VITISV_040233 [Vitis vinifera])

HSP 1 Score: 269.2 bits (687), Expect = 7.200e-69
Identity = 142/206 (68.93%), Postives = 173/206 (83.98%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEG+F +P  TGH ARL+ K+ +EK+A A++ ++R++  EKERR+ALRQ+RVIPDT  E
Sbjct: 38  DPEGLFGSP-NTGHIARLEFKRRLEKDAXAREAFQRHVLEEKERRQALRQSRVIPDTPEE 97

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQE E+EIAR+R RL+  FF  LQSELG LRF+++KTEEMEDR+ ELEALQ
Sbjct: 98  LIEYFLDTEAQEFEFEIARMRHRLDKDFFSHLQSELGQLRFSVSKTEEMEDRLIELEALQ 157

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KA+LEG E YDKMQ++L+ AKESLTKI TSKDV  TLL+MVE NELN SL+ LLDENIAS
Sbjct: 158 KALLEGTEAYDKMQADLITAKESLTKILTSKDVKATLLEMVEKNELNRSLLALLDENIAS 217

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A  S+QKQA  +MEKLRA+VLKY+TV
Sbjct: 218 AQSSEQKQAVAFMEKLRAAVLKYITV 242

[Close]

BLAST of Spo11369.1 vs. NCBI nr
Match: gi|729322195|ref|XP_010533757.1| (PREDICTED: uncharacterized protein LOC104809449 [Tarenaya hassleriana])

HSP 1 Score: 268.1 bits (684), Expect = 1.600e-68
Identity = 140/206 (67.96%), Postives = 175/206 (84.95%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DP+G+F  P QTGH ARL+ K+ +E++A+A++ ++R ++ EKERR+ALR++RVIPDT +E
Sbjct: 31  DPKGLFGPP-QTGHLARLEFKRRLERDAEAREAFQRQIREEKERRQALRKSRVIPDTAAE 90

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQEIE+EIARLR RLND FF Q++ E+G LRFA++KTEEMEDR+ ELEALQ
Sbjct: 91  LIEYFLDTEAQEIEFEIARLRQRLNDEFFSQIRLEIGQLRFAVSKTEEMEDRLIELEALQ 150

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KA+ EGIE YDKMQ+EL+ AK SLTKI T+ DV  TLL+MVE NELN SL+ LLDENIA+
Sbjct: 151 KALEEGIEAYDKMQNELITAKNSLTKILTTSDVKATLLEMVEKNELNRSLLALLDENIAN 210

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A R +QKQAAEYME +R SVLKY+TV
Sbjct: 211 AYRGNQKQAAEYMESIRGSVLKYLTV 235

[Close]

BLAST of Spo11369.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QI76_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181510 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 5.700e-105
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE
Sbjct: 32  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 91

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ
Sbjct: 92  LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 151

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS
Sbjct: 152 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 211

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           ANRSDQKQAAEYMEKLRASVLKYVTV
Sbjct: 212 ANRSDQKQAAEYMEKLRASVLKYVTV 237

[Close]

BLAST of Spo11369.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFN5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098100 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 6.500e-85
Identity = 168/206 (81.55%), Postives = 189/206 (91.75%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEGVF+ P QTGH ARL+ KK +EK+++AK+ YER L+ EKERRE++RQ+RV+PDTD+E
Sbjct: 32  DPEGVFRQPPQTGHLARLEFKKRLEKDSEAKEAYERQLREEKERRESVRQSRVVPDTDTE 91

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQEIE+EIARLR RLND FFKQLQSELG LRFAMAKTE+MEDR+FELEALQ
Sbjct: 92  LIEYFLDTEAQEIEFEIARLRSRLNDNFFKQLQSELGQLRFAMAKTEDMEDRIFELEALQ 151

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KA+LEGIE YDKMQ+ELVKAK+SLTKIFTSKDVN TLLDMVE NELN SLVTLLDENIAS
Sbjct: 152 KALLEGIEAYDKMQNELVKAKQSLTKIFTSKDVNSTLLDMVEQNELNRSLVTLLDENIAS 211

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A RS+Q QAAEYMEKLR+SVLKYVTV
Sbjct: 212 AYRSNQNQAAEYMEKLRSSVLKYVTV 237

[Close]

BLAST of Spo11369.1 vs. UniProtKB/TrEMBL
Match: D7TDD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0323g00040 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.800e-69
Identity = 142/206 (68.93%), Postives = 173/206 (83.98%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEG+F +P  TGH ARL+ K+ +EK+ADA++ ++R++  EKERR+ALRQ+RVIPDT  E
Sbjct: 38  DPEGLFGSP-NTGHIARLEFKRRLEKDADAREAFQRHVLEEKERRQALRQSRVIPDTPEE 97

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQE E+EIAR+R RL+  FF  LQSE G LRF+++KTEEMEDR+ ELEALQ
Sbjct: 98  LIEYFLDTEAQEFEFEIARMRHRLDKDFFSHLQSERGQLRFSVSKTEEMEDRLIELEALQ 157

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KA+LEG E YDKMQ++L+ AKESLTKI TSKDV  TLL+MVE NELN SL+ LLDENIAS
Sbjct: 158 KALLEGTEAYDKMQADLITAKESLTKILTSKDVKATLLEMVEKNELNRSLLALLDENIAS 217

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A  S+QKQA  +MEKLRA+VLKY+TV
Sbjct: 218 AQSSEQKQAVAFMEKLRAAVLKYITV 242

[Close]

BLAST of Spo11369.1 vs. UniProtKB/TrEMBL
Match: A5BEK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040233 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.000e-69
Identity = 142/206 (68.93%), Postives = 173/206 (83.98%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEG+F +P  TGH ARL+ K+ +EK+A A++ ++R++  EKERR+ALRQ+RVIPDT  E
Sbjct: 38  DPEGLFGSP-NTGHIARLEFKRRLEKDAXAREAFQRHVLEEKERRQALRQSRVIPDTPEE 97

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQE E+EIAR+R RL+  FF  LQSELG LRF+++KTEEMEDR+ ELEALQ
Sbjct: 98  LIEYFLDTEAQEFEFEIARMRHRLDKDFFSHLQSELGQLRFSVSKTEEMEDRLIELEALQ 157

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KA+LEG E YDKMQ++L+ AKESLTKI TSKDV  TLL+MVE NELN SL+ LLDENIAS
Sbjct: 158 KALLEGTEAYDKMQADLITAKESLTKILTSKDVKATLLEMVEKNELNRSLLALLDENIAS 217

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A  S+QKQA  +MEKLRA+VLKY+TV
Sbjct: 218 AQSSEQKQAVAFMEKLRAAVLKYITV 242

[Close]

BLAST of Spo11369.1 vs. UniProtKB/TrEMBL
Match: V7CGS1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G060700g PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.200e-68
Identity = 137/206 (66.50%), Postives = 173/206 (83.98%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DPEGV   P QTGH ARL+ ++ +E++++A++ +ER ++ +KERR+ LRQ+R++PDT  E
Sbjct: 38  DPEGVLGRP-QTGHLARLEFRRRLERDSEAREAFERQVQEDKERRQTLRQSRIVPDTPEE 97

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEY LDTEAQEIE+EIAR+RPRL++GFF QL+ ELG LRFA+ KTE ME+R  ELEAL+
Sbjct: 98  LIEYLLDTEAQEIEFEIARMRPRLDEGFFAQLKFELGQLRFAVKKTEHMEERQIELEALE 157

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KAI EGIE YDKMQ EL+KA+ +LTKI TSKDV  TLLDMVE NELN SL+ LLDENIA+
Sbjct: 158 KAIQEGIEAYDKMQGELIKARANLTKILTSKDVKATLLDMVEKNELNRSLLALLDENIAN 217

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A+R +QKQAAEYMEKLR SV++Y+TV
Sbjct: 218 AHRGNQKQAAEYMEKLRGSVIRYITV 242

[Close]

BLAST of Spo11369.1 vs. TAIR (Arabidopsis)
Match: AT1G62780.1 (unknown protein)

HSP 1 Score: 255.0 bits (650), Expect = 5.000e-68
Identity = 130/206 (63.11%), Postives = 172/206 (83.50%), Query Frame = 1

		  
Query: 51  DPEGVFKTPAQTGHFARLDMKKGIEKEADAKDDYERYLKNEKERREALRQARVIPDTDSE 110
           DP+GV   PAQTGH ARL+ K+ +E++++A++ +++ L+ EKERR+ALRQ+RV+PDT +E
Sbjct: 33  DPKGVLG-PAQTGHIARLEFKRRLERDSEAREAFQKQLREEKERRQALRQSRVVPDTAAE 92

Query: 111 LIEYFLDTEAQEIEYEIARLRPRLNDGFFKQLQSELGHLRFAMAKTEEMEDRVFELEALQ 170
           LIEYFLDTEAQEIEYEIARLR RLND FF Q++ E+G +RFA+ KT ++EDR+ ELE LQ
Sbjct: 93  LIEYFLDTEAQEIEYEIARLRGRLNDEFFAQIRLEIGQIRFAVTKTADIEDRLIELETLQ 152

Query: 171 KAILEGIEGYDKMQSELVKAKESLTKIFTSKDVNKTLLDMVELNELNMSLVTLLDENIAS 230
           KA+ EGIE YDKMQ+EL+ A  SLTK+ TS D+  TLLDMVE N++N SL+ LLDENIA+
Sbjct: 153 KALEEGIEAYDKMQNELMTATNSLTKLLTSTDIKTTLLDMVEKNQINRSLLALLDENIAN 212

Query: 231 ANRSDQKQAAEYMEKLRASVLKYVTV 257
           A + +QK+A +YMEK+R+SVLKY+TV
Sbjct: 213 AYKGNQKEAGDYMEKIRSSVLKYLTV 237

The following BLAST results are available for this feature:

BLAST of Spo11369.1 vs. NCBI nr
BLAST of Spo11369.1 vs. UniProtKB/TrEMBL
BLAST of Spo11369.1 vs. ExPASy Swiss-Prot
BLAST of Spo11369.1 vs. TAIR (Arabidopsis)

BLAST of Spo11369.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902160134\|gb\|KNA06393.1\|	8.1e-105	100.	hypothetical protein SOVF_1815...	[more]
gi\|731330549\|ref\|XP_010676191.1\|	9.4e-85	81.5	PREDICTED: uncharacterized pro...	[more]
gi\|225426919\|ref\|XP_002264554.1\|	5.5e-69	68.9	PREDICTED: uncharacterized pro...	[more]
gi\|147861738\|emb\|CAN83165.1\|	7.2e-69	68.9	hypothetical protein VITISV_04...	[more]
gi\|729322195\|ref\|XP_010533757.1\|	1.6e-68	67.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo11369.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QI76_SPIOL	5.7e-105	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CFN5_BETVU	6.5e-85	81.5	Uncharacterized protein OS=Bet...	[more]
D7TDD2_VITVI	3.8e-69	68.9	Putative uncharacterized prote...	[more]
A5BEK8_VITVI	5.0e-69	68.9	Putative uncharacterized prote...	[more]
V7CGS1_PHAVU	3.2e-68	66.5	Uncharacterized protein OS=Pha...	[more]

BLAST of Spo11369.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo11369.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT1G62780.1	5.0e-68	63.1	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 74..101 scor
None	No IPR available	PANTHER	PTHR36333	FAMILY NOT NAMED	coord: 51..256 score: 1.9
None	No IPR available	PANTHER	PTHR36333:SF1	SUBFAMILY NOT NAMED	coord: 51..256 score: 1.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:0051607	defense response to virus
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0006223	uracil salvage
biological_process	GO:0044206	UMP salvage
biological_process	GO:0032502	developmental process
biological_process	GO:0046148	pigment biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:1901362	organic cyclic compound biosynthetic process
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0072330	monocarboxylic acid biosynthetic process
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0098542	defense response to other organism
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0006412	translation
biological_process	GO:0009409	response to cold
biological_process	GO:0015031	protein transport
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0018160	peptidyl-pyrromethane cofactor linkage
biological_process	GO:0009814	defense response, incompatible interaction
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0010239	chloroplast mRNA processing
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0019438	aromatic compound biosynthetic process
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006733	oxidoreduction coenzyme metabolic process
biological_process	GO:0009117	nucleotide metabolic process
biological_process	GO:0009106	lipoate metabolic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0006546	glycine catabolic process
biological_process	GO:0009108	coenzyme biosynthetic process
biological_process	GO:0019748	secondary metabolic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0042545	cell wall modification
biological_process	GO:0030154	cell differentiation
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0016310	phosphorylation
biological_process	GO:0030001	metal ion transport
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006766	vitamin metabolic process
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0016556	mRNA modification
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009537	proplastid
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0009501	amyloplast
cellular_component	GO:0009513	etioplast
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016020	membrane
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009536	plastid
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000311	plastid large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004418	hydroxymethylbilane synthase activity
molecular_function	GO:0004845	uracil phosphoribosyltransferase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22999	0.77	Barchart \| Table
Spo26644	0.76	Barchart \| Table
Spo09282	0.73	Barchart \| Table
Spo08715	0.71	Barchart \| Table
Spo20640	0.71	Barchart \| Table
Spo19288	0.71	Barchart \| Table
Spo10493	0.71	Barchart \| Table
Spo26673	0.70	Barchart \| Table
Spo01401	0.70	Barchart \| Table
Spo00405	0.69	Barchart \| Table
Spo06060	0.69	Barchart \| Table
Spo03064	0.69	Barchart \| Table
Spo25773	0.69	Barchart \| Table
Spo08474	0.68	Barchart \| Table
Spo21808	0.68	Barchart \| Table
Spo00921	0.67	Barchart \| Table
Spo24056	0.66	Barchart \| Table
Spo03906	0.66	Barchart \| Table
Spo08824	0.66	Barchart \| Table
Spo09784	0.66	Barchart \| Table
Spo14906	0.66	Barchart \| Table
Spo06775	0.65	Barchart \| Table
Spo16115	0.65	Barchart \| Table
Spo18111	0.65	Barchart \| Table
Spo11221	0.65	Barchart \| Table