Spo11379 (gene)

Overview
NameSpo11379
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionYABBY protein
Locationchr6 : 45590432 .. 45594610 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAGTAGTTGACAGAATGAAGTATACCACATACATAACGTTACAAGAATTAGAGATAACATCCATTAACATGACATGAGAAATGAGATACATGTAGAGGCATTATATTGGGGTATAAAAGGAAACACAAAGAAGAGTTGAGTATAATGAGAAATGAAGGAGGAAGCAAAGTAAGGACATAGCCACTCTCTCATACGGAGTACTCCTATTATTATCTACTAGATCAACAACACCACCTCCCACTATCTCTAGGATCTCTTTCTCTTTCTATCTCTATCTCTCTCTTCCCACTCACCTGTCTTTCATTCTGAGCAGAGCAGCAATACACAAAGCTGAAATTTAAGTTGAAAACAAAAAGGGGAAATTAAATTTAAACAAAAAAAAAGGATCCAAGGGTGTTGGGGTTTCATCTGTCAAACCCATCAAATCATATCAAATCAAATCAAATCAAATATCAGAAAACAAAGGATTGATCAAATTTCAAATCATCAATTATAAAAGAGAGAGAAGAAACAGAAATGTCAAGCTCTACATCATCAACAATAACAACTAACTTGTCATTGGACCCCTTCCCTTCTTCTGAACAACTCTGCTATCTCCAATGCTCTCGTTGCGACACTGTTCTTGCGGTATTCCTTCCTCCTTTGTTTCTTCTATATTGTTACTGTTCGCGGGATTAATACTGGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATCTTGTTATTACTATTAATGGTGTATTTTTCAAATTTAATGTTTATGATTTGATAGAAGTGGAGTATATCCTTTATTTTAGGGTTTTGTTTTGTTTGTGATAACATAAATTTCAACTTTGGGGACAGGTAAGTGTGCCGTCAAGCAGCTTGTATAAGACGGTGACAGTCCGATGTGGACATTGCACCCACCTCCTTCCGGTGAACACGCGGTCGCTTTTACCGCCGCCGCCGCCGCCTAACCAGCTTCACTTGTCTCATAACTTCTTCTCCCCAACCTCCCACTATCGTCTGGTATATATTACTCCTTATTGCTATAATAATATCATCACTCAAAAAATAAAAATAAAAAGAGGCTAGGGTTTCTATTTTTAGGAATTGAGAAAGAGTATAATATTTTAATTAATTGTTCATAAGATTCTAATTTTTTTATCTCAAAATAAGAAATTTAATCATTTTAGTTTTGGTTTTTTAGGGGGAGATGCCAAACCAAAGTCCAAATTTCTCACTCACACAACCAGGTGGTGCATCTAATTACATGACTCCAACACTAAGCCGCGGCGGTGCGAACGAGCTACCGAGGGTTCCTACCACCAACAGACGTGAGCTTATTAATTAATTTCTTAAATATATATGTTCATAATTCATCTTATTCTAGCTTTGATATATAAATTCATCTTAAGAAGTATAAATATTTAATTCATTTTATTTTTTTGTTGTTGTTAGGAGAGAAGGGTGGGGTGTTCTTTTAATGCTAGCTATGACTACTTTTTGCAGCAACTTTGTCATTGATTCAGTGTTGTTTCAGCACTAGAGGATGACTTTGTTAATTACTCTGTACTTTGAACTAGCTTAATCAACTCTAACAATTGATATTAAAAGCAACAAGAACCTAAAATTAATTAGGTGAATTTGGCATAGCTTATGAATTTAATGAATGTGTAATGAAAAACTAGTACAATCCCATCAAATCATTTTCTTTTGCCATTGGCTACATGGGTGGTCCTTCATAAAATCACAAACTTTTATTACTTTTAAGACAAACTATACGGAGTATATTATTGGTTACCAAAAGCGGCCACTTATATAGTCGGTTTTTTTGTATTCCGTAGTAAAATAAAATACAAAAAGATGCTTGAAAGTCTTTGTAAAATATTTGTATCAATTCTAATTTCTTTTCCATTGAACACCCTTCATTATTCAAAATCGGAATTCTTGATTGGCTCACTAATTGAAATAGGTAGAGCACATGTTAATTAGTTAAAATCAAATGGATCGAGAACATATAAAAGAACAAATAAACATGAGATATAGAGCAAGGGATTTCTTGAGATGTTTTTTATGGTGCAAATGAACCATAATGATAGGAATGAAAATCGATCTCATGATCACCTGTAACCAACTGAGCTATCCCCCACTCCCGGGCTTTCTTGAGATATGATTCATATCAAAGTAGCTCAGAAGATCGATAGCAAAGGGTTATTACAATGTTTTTATTGGGGTGTTAATTACAATTATAACCTTCCTAAACAATAGAGCATAGACAAGAATTAAGACAAGGTTGTCTTTGTGTTTGTTTGTTTTCTATGTCAGTAAGTGAATAAGAGAGATATTACAATCATTGTTTCCCGGAAGTTAAGGGGAAAGGAAAAGGGTGATAATCATTTACGTGTTTATACAATCATTACAAAATAAAGTTAAGGTTTGTAAGTGTCAATAACTCAATATAGTATGTCTAATGTTTAGAAAAAAGCAAAAAACTGTACATTTTTGTAACACAAGGACTACGGATAAACAAAAAAGCAAAAAAAATTCAAGCTGCTAATTTATTGTTTATTAACGGACTAATTATTTATCTATAATTCTTAAAATTTTCCATAGATTCAAACTCTAGATTTTTTGTATTCAAAGGAGTGTTTTATTTTATTTTGAGGTGTTCTTATTGTTTGTACTTGATTAATTATACAAGTCAGCCGTACATATTTTTCTGATAAGATTTGGATGTGCCCTTTTGTAAACAGCACCGGAAAAAAGACAGAGAGTTCCTTCTGCTTACAACCGATTCATCAAGTGAGTAATCTTTCAAAATAAAAATTAAAAAAAAAAAACTGAAATTTCTTCTCTAATTTTCTAGTCTCTAATTATTGTACATAATTGGCTGGTGCAGAGATGAGATCCAACGTATTAAGGCTCAAAATCCTGATATTACTCACAGAGAGGCTTTTAGTGCTGCTGCCAAGAATGTAAGATTACTTAACCTAACTAATTAACCACTAATCACATTGTTTTACTTGAGGATTAGATGATCAGCTCCATTTAAAGATAAGCATTTTTTGTGTTTAGATAATCAGCTCCATTCAAAGGCACAACTAAGCTCTACTAGTCTATTATTGTACATGAGAGTATGTGACATACATGCATATATAATTGAATACGGAAACATTTGATGTGCATATATATATATATATATGCCCTACGCGTTTCACACATTGGCATGTGTATGTCAAATGTTGTAATCATAATGTCAATCTTGTCAAGCATATTACCATTTTACGCGCAATGTGTATCATGTATTTGCTGATACAAGTTGTGTACGTGTTCTTTTATAACACCATGTGTTTAATGGTTGGAACTTACAATCTTATTAGACTTATTTCTTAAATTATGTTACTCATTCTCTCAATATAACTGGAAAGTACAACCTTTGTCATCACGGTCGAAGTGAAATTCTAAAAGTATAAAATCAGCTTTATGTGCATTTTTTAGTCCTTACATATACTCATTTTATAATTTATTCAATGTTAATCATTTTTGTACCTGGATTATTTAAGTTATTAATATGTCACACTGTACATTAGGGTTTTAGTATAAAAGTTTATGGTTAAATTTTGACAAAAGAAATTGTATTATAATGAATAGTGGGCCCACTTTCCCCATATCCATTTTGGGCTGATGCCGGATCAGACGGTGAAAAGGACAAGTAACATGCGGCCTCACCATCCCCAGGTAATTCTATCAATCTATTCACCATTCCCATATTTAGGGCAAACACCACACTTTTCTCCTCCTTTTTTTAACTAAAATTTGGCTGTTGTTTTTAATTTTTTTTACTGTTTATGGTAAAAGGAAGCTGGAGAAGATGTCCGCATGAGAACTGGATATTACGGTGCTCAAGCTAATGTTGGTGTTTCTCCCTATTAAAATAACACAAAACTGAATTAATTATGCTGATGTTTAATTAATTTGCAACCCTTTTTATTTTCTTCAGTTCTTCATAATAGTCGTCGGGCGACGAATGTAATTAGGTGGGGTGTAATTTTGATATCCAGATTGCCTTGTTAAGCCTTTAATTTCTGTGATATCTTCATAACTCACCAGAAATTTCAATGATATCTGTTTGTTGTATAATACAACTTGGTTTTATTAAAATTAACCCATTGCACTTTAACTCATTGCTTTGGTG

mRNA sequence

AATAGTAGTTGACAGAATGAAGTATACCACATACATAACGTTACAAGAATTAGAGATAACATCCATTAACATGACATGAGAAATGAGATACATGTAGAGGCATTATATTGGGGTATAAAAGGAAACACAAAGAAGAGTTGAGTATAATGAGAAATGAAGGAGGAAGCAAAGTAAGGACATAGCCACTCTCTCATACGGAGTACTCCTATTATTATCTACTAGATCAACAACACCACCTCCCACTATCTCTAGGATCTCTTTCTCTTTCTATCTCTATCTCTCTCTTCCCACTCACCTGTCTTTCATTCTGAGCAGAGCAGCAATACACAAAGCTGAAATTTAAGTTGAAAACAAAAAGGGGAAATTAAATTTAAACAAAAAAAAAGGATCCAAGGGTGTTGGGGTTTCATCTGTCAAACCCATCAAATCATATCAAATCAAATCAAATCAAATATCAGAAAACAAAGGATTGATCAAATTTCAAATCATCAATTATAAAAGAGAGAGAAGAAACAGAAATGTCAAGCTCTACATCATCAACAATAACAACTAACTTGTCATTGGACCCCTTCCCTTCTTCTGAACAACTCTGCTATCTCCAATGCTCTCGTTGCGACACTGTTCTTGCGGTAAGTGTGCCGTCAAGCAGCTTGTATAAGACGGTGACAGTCCGATGTGGACATTGCACCCACCTCCTTCCGGTGAACACGCGGTCGCTTTTACCGCCGCCGCCGCCGCCTAACCAGCTTCACTTGTCTCATAACTTCTTCTCCCCAACCTCCCACTATCGTCTGGGGGAGATGCCAAACCAAAGTCCAAATTTCTCACTCACACAACCAGGTGGTGCATCTAATTACATGACTCCAACACTAAGCCGCGGCGGTGCGAACGAGCTACCGAGGGTTCCTACCACCAACAGACCACCGGAAAAAAGACAGAGAGTTCCTTCTGCTTACAACCGATTCATCAAAGATGAGATCCAACGTATTAAGGCTCAAAATCCTGATATTACTCACAGAGAGGCTTTTAGTGCTGCTGCCAAGAATTGGGCCCACTTTCCCCATATCCATTTTGGGCTGATGCCGGATCAGACGGTGAAAAGGACAAGTAACATGCGGCCTCACCATCCCCAGGAAGCTGGAGAAGATGTCCGCATGAGAACTGGATATTACGGTGCTCAAGCTAATGTTGGTGTTTCTCCCTATTAAAATAACACAAAACTGAATTAATTATGCTGATGTTTAATTAATTTGCAACCCTTTTTATTTTCTTCAGTTCTTCATAATAGTCGTCGGGCGACGAATGTAATTAGGTGGGGTGTAATTTTGATATCCAGATTGCCTTGTTAAGCCTTTAATTTCTGTGATATCTTCATAACTCACCAGAAATTTCAATGATATCTGTTTGTTGTATAATACAACTTGGTTTTATTAAAATTAACCCATTGCACTTTAACTCATTGCTTTGGTG

Coding sequence (CDS)

ATGTCAAGCTCTACATCATCAACAATAACAACTAACTTGTCATTGGACCCCTTCCCTTCTTCTGAACAACTCTGCTATCTCCAATGCTCTCGTTGCGACACTGTTCTTGCGGTAAGTGTGCCGTCAAGCAGCTTGTATAAGACGGTGACAGTCCGATGTGGACATTGCACCCACCTCCTTCCGGTGAACACGCGGTCGCTTTTACCGCCGCCGCCGCCGCCTAACCAGCTTCACTTGTCTCATAACTTCTTCTCCCCAACCTCCCACTATCGTCTGGGGGAGATGCCAAACCAAAGTCCAAATTTCTCACTCACACAACCAGGTGGTGCATCTAATTACATGACTCCAACACTAAGCCGCGGCGGTGCGAACGAGCTACCGAGGGTTCCTACCACCAACAGACCACCGGAAAAAAGACAGAGAGTTCCTTCTGCTTACAACCGATTCATCAAAGATGAGATCCAACGTATTAAGGCTCAAAATCCTGATATTACTCACAGAGAGGCTTTTAGTGCTGCTGCCAAGAATTGGGCCCACTTTCCCCATATCCATTTTGGGCTGATGCCGGATCAGACGGTGAAAAGGACAAGTAACATGCGGCCTCACCATCCCCAGGAAGCTGGAGAAGATGTCCGCATGAGAACTGGATATTACGGTGCTCAAGCTAATGTTGGTGTTTCTCCCTATTAA

Protein sequence

MSSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11379.1Spo11379.1mRNA


Homology
[Close]
BLAST of Spo11379.1 vs. NCBI nr
Match: gi|902189831|gb|KNA11476.1| (hypothetical protein SOVF_134890 [Spinacia oleracea])

HSP 1 Score: 470.7 bits (1210), Expect = 1.500e-129
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1 

		  

Query: 1   MSSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLL 60
           MSSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLL
Sbjct: 1   MSSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLL 60

Query: 61  PVNTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSR 120
           PVNTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSR
Sbjct: 61  PVNTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSR 120

Query: 121 GGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHF 180
           GGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHF
Sbjct: 121 GGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHF 180

Query: 181 PHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY 230
           PHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY
Sbjct: 181 PHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY 229
[Close]
BLAST of Spo11379.1 vs. NCBI nr
Match: gi|731330525|ref|XP_010676177.1| (PREDICTED: axial regulator YABBY 1-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 380.6 bits (976), Expect = 2.000e-102
Identity = 186/227 (81.94%), Postives = 204/227 (89.87%), Query Frame = 1 

		  

Query: 5   TSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNT 64
           +SST TTNLSLD FP SEQLCYLQC+RC+TVLAVSVPS SL+KTVTVRCGHCTHL P NT
Sbjct: 2   SSSTTTTNLSLDHFPPSEQLCYLQCTRCETVLAVSVPSCSLFKTVTVRCGHCTHLQPANT 61

Query: 65  RSLLPPPPPPNQLHLSHNFFS-PTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGA 124
           RSLL   PPPNQ HL+HN++S PTSHYRLGEM N SP +S+TQP   S+YMTPTLSRGG+
Sbjct: 62  RSLL-VQPPPNQFHLAHNYYSPPTSHYRLGEMANPSPTYSVTQPNATSSYMTPTLSRGGS 121

Query: 125 NELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHI 184
           NELP+ PTTNRPPEKRQRVPSAYNRFIK+EIQRIKA+NPDI+HREAFSAAAKNWAHFPHI
Sbjct: 122 NELPKPPTTNRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNWAHFPHI 181

Query: 185 HFGLMPDQTVKRTSNMRPHHPQEAGED-VRMRTGYYGAQANVGVSPY 230
           HFGLMPDQT KRTS MRPHHPQEAGED VRMR+G+Y AQ NVG+SPY
Sbjct: 182 HFGLMPDQTAKRTSTMRPHHPQEAGEDNVRMRSGFYSAQTNVGISPY 227
[Close]
BLAST of Spo11379.1 vs. NCBI nr
Match: gi|731330527|ref|XP_010676179.1| (PREDICTED: protein YABBY 4-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 344.0 bits (881), Expect = 2.100e-91
Identity = 167/202 (82.67%), Postives = 182/202 (90.10%), Query Frame = 1 

		  

Query: 5   TSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNT 64
           +SST TTNLSLD FP SEQLCYLQC+RC+TVLAVSVPS SL+KTVTVRCGHCTHL P NT
Sbjct: 2   SSSTTTTNLSLDHFPPSEQLCYLQCTRCETVLAVSVPSCSLFKTVTVRCGHCTHLQPANT 61

Query: 65  RSLLPPPPPPNQLHLSHNFFS-PTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGA 124
           RSLL   PPPNQ HL+HN++S PTSHYRLGEM N SP +S+TQP   S+YMTPTLSRGG+
Sbjct: 62  RSLL-VQPPPNQFHLAHNYYSPPTSHYRLGEMANPSPTYSVTQPNATSSYMTPTLSRGGS 121

Query: 125 NELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHI 184
           NELP+ PTTNRPPEKRQRVPSAYNRFIK+EIQRIKA+NPDI+HREAFSAAAKNWAHFPHI
Sbjct: 122 NELPKPPTTNRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNWAHFPHI 181

Query: 185 HFGLMPDQTVKRTSNMRPHHPQ 206
           HFGLMPDQT KRTS MRPHHPQ
Sbjct: 182 HFGLMPDQTAKRTSTMRPHHPQ 202
[Close]
BLAST of Spo11379.1 vs. NCBI nr
Match: gi|1011997087|ref|XP_015963203.1| (PREDICTED: protein YABBY 4-like [Arachis duranensis])

HSP 1 Score: 287.0 bits (733), Expect = 3.000e-74
Identity = 155/228 (67.98%), Postives = 176/228 (77.19%), Query Frame = 1 

		  

Query: 2   SSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLP 61
           SSS+SS+ +T LSLD  P SEQLCY+ C+ CDTVLAVSVP +SL+KTVTVRCGHCT+LLP
Sbjct: 3   SSSSSSSSSTTLSLDHIPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLP 62

Query: 62  VNTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRG 121
           VN R LL P P  NQ H  H+FFSPT H  L E+PN SPNF + Q    + +  PT  R 
Sbjct: 63  VNMRGLLLPSP--NQFHFGHSFFSPT-HNLLEEIPNPSPNFFMNQTNTPNEFSMPT--RT 122

Query: 122 GANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFP 181
             +ELPR P  NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDITHREAFSAAAKNWAHFP
Sbjct: 123 VVDELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFP 182

Query: 182 HIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY 230
           HIHFGLMPDQTVK+T N+R    Q+ GE+V M+   + A ANVGVSPY
Sbjct: 183 HIHFGLMPDQTVKKT-NVR----QQEGEEVLMKDAGFYASANVGVSPY 220
[Close]
BLAST of Spo11379.1 vs. NCBI nr
Match: gi|922363598|ref|XP_003608761.2| (plant-specific transcription factor YABBY family protein [Medicago truncatula])

HSP 1 Score: 286.2 bits (731), Expect = 5.100e-74
Identity = 147/224 (65.62%), Postives = 173/224 (77.23%), Query Frame = 1 

		  

Query: 6   SSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNTR 65
           SS+ TT LSLD  P SEQLCY+ C+ CDT+LAVSVP +SL+KTVTVRCGHCT+LLPVN R
Sbjct: 2   SSSSTTTLSLDHLPPSEQLCYVHCTICDTILAVSVPCTSLFKTVTVRCGHCTNLLPVNMR 61

Query: 66  SLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGANE 125
           +LL P P  NQ HL H+FFSPT H  L EMPN +PNF +      +++  P  +R  A+E
Sbjct: 62  ALLLPSP--NQFHLGHSFFSPTHHNLLEEMPNPAPNFMMNHINAPNDFSMPP-TRTVADE 121

Query: 126 LPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHIHF 185
           LPR P  NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDITHREAFSAAAKNWAHFPHIHF
Sbjct: 122 LPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHF 181

Query: 186 GLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY 230
           GLMPDQT+K+T+  +    QE  + + M+ G + A AN+GVSPY
Sbjct: 182 GLMPDQTMKKTNVCQ----QEGDDQILMKDGGFYASANLGVSPY 218
[Close]
BLAST of Spo11379.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QY62_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134890 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.000e-129
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1 

		  

Query: 1   MSSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLL 60
           MSSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLL
Sbjct: 1   MSSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLL 60

Query: 61  PVNTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSR 120
           PVNTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSR
Sbjct: 61  PVNTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSR 120

Query: 121 GGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHF 180
           GGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHF
Sbjct: 121 GGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHF 180

Query: 181 PHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY 230
           PHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY
Sbjct: 181 PHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY 229
[Close]
BLAST of Spo11379.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CG91_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g097950 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.400e-102
Identity = 186/227 (81.94%), Postives = 204/227 (89.87%), Query Frame = 1 

		  

Query: 5   TSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNT 64
           +SST TTNLSLD FP SEQLCYLQC+RC+TVLAVSVPS SL+KTVTVRCGHCTHL P NT
Sbjct: 2   SSSTTTTNLSLDHFPPSEQLCYLQCTRCETVLAVSVPSCSLFKTVTVRCGHCTHLQPANT 61

Query: 65  RSLLPPPPPPNQLHLSHNFFS-PTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGA 124
           RSLL   PPPNQ HL+HN++S PTSHYRLGEM N SP +S+TQP   S+YMTPTLSRGG+
Sbjct: 62  RSLL-VQPPPNQFHLAHNYYSPPTSHYRLGEMANPSPTYSVTQPNATSSYMTPTLSRGGS 121

Query: 125 NELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHI 184
           NELP+ PTTNRPPEKRQRVPSAYNRFIK+EIQRIKA+NPDI+HREAFSAAAKNWAHFPHI
Sbjct: 122 NELPKPPTTNRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNWAHFPHI 181

Query: 185 HFGLMPDQTVKRTSNMRPHHPQEAGED-VRMRTGYYGAQANVGVSPY 230
           HFGLMPDQT KRTS MRPHHPQEAGED VRMR+G+Y AQ NVG+SPY
Sbjct: 182 HFGLMPDQTAKRTSTMRPHHPQEAGEDNVRMRSGFYSAQTNVGISPY 227
[Close]
BLAST of Spo11379.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CKI1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g097950 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.400e-91
Identity = 167/202 (82.67%), Postives = 182/202 (90.10%), Query Frame = 1 

		  

Query: 5   TSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNT 64
           +SST TTNLSLD FP SEQLCYLQC+RC+TVLAVSVPS SL+KTVTVRCGHCTHL P NT
Sbjct: 2   SSSTTTTNLSLDHFPPSEQLCYLQCTRCETVLAVSVPSCSLFKTVTVRCGHCTHLQPANT 61

Query: 65  RSLLPPPPPPNQLHLSHNFFS-PTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGA 124
           RSLL   PPPNQ HL+HN++S PTSHYRLGEM N SP +S+TQP   S+YMTPTLSRGG+
Sbjct: 62  RSLL-VQPPPNQFHLAHNYYSPPTSHYRLGEMANPSPTYSVTQPNATSSYMTPTLSRGGS 121

Query: 125 NELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHI 184
           NELP+ PTTNRPPEKRQRVPSAYNRFIK+EIQRIKA+NPDI+HREAFSAAAKNWAHFPHI
Sbjct: 122 NELPKPPTTNRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNWAHFPHI 181

Query: 185 HFGLMPDQTVKRTSNMRPHHPQ 206
           HFGLMPDQT KRTS MRPHHPQ
Sbjct: 182 HFGLMPDQTAKRTSTMRPHHPQ 202
[Close]
BLAST of Spo11379.1 vs. UniProtKB/TrEMBL
Match: G7JK46_MEDTR (Plant-specific transcription factor YABBY family protein OS=Medicago truncatula GN=MTR_4g101660 PE=4 SV=2)

HSP 1 Score: 286.2 bits (731), Expect = 3.500e-74
Identity = 147/224 (65.62%), Postives = 173/224 (77.23%), Query Frame = 1 

		  

Query: 6   SSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNTR 65
           SS+ TT LSLD  P SEQLCY+ C+ CDT+LAVSVP +SL+KTVTVRCGHCT+LLPVN R
Sbjct: 2   SSSSTTTLSLDHLPPSEQLCYVHCTICDTILAVSVPCTSLFKTVTVRCGHCTNLLPVNMR 61

Query: 66  SLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGANE 125
           +LL P P  NQ HL H+FFSPT H  L EMPN +PNF +      +++  P  +R  A+E
Sbjct: 62  ALLLPSP--NQFHLGHSFFSPTHHNLLEEMPNPAPNFMMNHINAPNDFSMPP-TRTVADE 121

Query: 126 LPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHIHF 185
           LPR P  NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDITHREAFSAAAKNWAHFPHIHF
Sbjct: 122 LPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHF 181

Query: 186 GLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY 230
           GLMPDQT+K+T+  +    QE  + + M+ G + A AN+GVSPY
Sbjct: 182 GLMPDQTMKKTNVCQ----QEGDDQILMKDGGFYASANLGVSPY 218
[Close]
BLAST of Spo11379.1 vs. UniProtKB/TrEMBL
Match: I1MUX5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G138200 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.300e-73
Identity = 153/227 (67.40%), Postives = 176/227 (77.53%), Query Frame = 1 

		  

Query: 3   SSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPV 62
           SS+SST    LSLD  P SEQLCY+ C+ CDTVLAVSVP +SL+KTVTVRCGHCT+LLPV
Sbjct: 2   SSSSST----LSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPV 61

Query: 63  NTRSLLPPPPPPNQLHLSHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGG 122
           N R LL P P   Q HL H+FFSP SH  L E+PN +PNF + Q   ++++     +R  
Sbjct: 62  NMRGLLMPSP--TQFHLGHSFFSP-SHNLLEEIPNPTPNFLMNQTNFSASHEFSMPARTA 121

Query: 123 ANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPH 182
           A+ELPR P TNRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDITHREAFSAAAKNWAHFPH
Sbjct: 122 ADELPRPPITNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPH 181

Query: 183 IHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRTGYYGAQANVGVSPY 230
           IHFGLMPDQTVK+T+       Q+ GE+V M+ G+Y A ANVGVSPY
Sbjct: 182 IHFGLMPDQTVKKTNVC-----QQDGEEVLMKDGFY-ASANVGVSPY 215
[Close]
BLAST of Spo11379.1 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.300e-57
Identity = 136/261 (52.11%), Postives = 163/261 (62.45%), Query Frame = 1 

		  

Query: 1   MSSSTSSTITTNLSLDPFPS-SEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHL 60
           MSSS+SS+    L     PS +EQLCY+ C+ CDT+LAV VP SSL+KTVTVRCGHC +L
Sbjct: 1   MSSSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANL 60

Query: 61  LPVNTRSLL---PPPPPPNQLHLSHNFFSPTS-HYRLGEMPNQSPNFSLTQPGGAS-NYM 120
           L VN R LL   P P P NQLH   +  SPTS H  L E+  Q+P+  + Q   AS + +
Sbjct: 61  LSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSI 120

Query: 121 TPTLSRGGANELPRVP-------------------TTNRPPEKRQRVPSAYNRFIKDEIQ 180
           T   S   A+  P +                    + NRPPEKRQRVPSAYNRFIKDEIQ
Sbjct: 121 TGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQ 180

Query: 181 RIKAQNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRT 230
           RIKA NPDI+HREAFSAAAKNWAHFPHIHFGLMPDQ  K+T       PQ+  ED+ ++ 
Sbjct: 181 RIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKT-----FKPQDGSEDILLKD 240
[Close]
BLAST of Spo11379.1 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.300e-57
Identity = 136/261 (52.11%), Postives = 163/261 (62.45%), Query Frame = 1 

		  

Query: 1   MSSSTSSTITTNLSLDPFPS-SEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHL 60
           MSSS+SS+    L     PS +EQLCY+ C+ CDT+LAV VP SSL+KTVTVRCGHC +L
Sbjct: 1   MSSSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANL 60

Query: 61  LPVNTRSLL---PPPPPPNQLHLSHNFFSPTS-HYRLGEMPNQSPNFSLTQPGGAS-NYM 120
           L VN R LL   P P P NQLH   +  SPTS H  L E+  Q+P+  + Q   AS + +
Sbjct: 61  LSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSI 120

Query: 121 TPTLSRGGANELPRVP-------------------TTNRPPEKRQRVPSAYNRFIKDEIQ 180
           T   S   A+  P +                    + NRPPEKRQRVPSAYNRFIKDEIQ
Sbjct: 121 TGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQ 180

Query: 181 RIKAQNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRMRT 230
           RIKA NPDI+HREAFSAAAKNWAHFPHIHFGLMPDQ  K+T       PQ+  ED+ ++ 
Sbjct: 181 RIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKT-----FKPQDGSEDILLKD 240
[Close]
BLAST of Spo11379.1 vs. ExPASy Swiss-Prot
Match: YAB3_ARATH (Axial regulator YABBY 3 OS=Arabidopsis thaliana GN=YAB3 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.300e-55
Identity = 131/250 (52.40%), Postives = 157/250 (62.80%), Query Frame = 1 

		  

Query: 2   SSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLP 61
           S S SS+       D F S++QLCY+ CS CDTVLAVSVP SSL+KTVTVRCGHC++LL 
Sbjct: 3   SMSMSSSSAPAFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLS 62

Query: 62  VNT--RSLL---------------PPPPPPNQLHLSH------NFFSPTSHYRLGEMPNQ 121
           V    R+LL               PPPPPPN L          N     SH+     PN+
Sbjct: 63  VTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNE 122

Query: 122 SPNFSLTQPGGASNYMTPTLSRGGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIK 181
               + T+ G + +++          E+PR P  NRPPEKRQRVPSAYNRFIK+EIQRIK
Sbjct: 123 HLVMA-TRNGRSVDHL---------QEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIK 182

Query: 182 AQNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRM-RTGY 228
           A NPDI+HREAFSAAAKNWAHFPHIHFGLM D    + +N+R    Q+ GED  M R G+
Sbjct: 183 AGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVR----QQEGEDGMMGREGF 238
[Close]
BLAST of Spo11379.1 vs. ExPASy Swiss-Prot
Match: YAB1_ARATH (Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.200e-54
Identity = 122/230 (53.04%), Postives = 152/230 (66.09%), Query Frame = 1 

		  

Query: 3   SSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPV 62
           SS SS  +   S D F  S+ LCY+QC+ C T+LAV+VP +SL+KTVTVRCG CT+LL V
Sbjct: 4   SSMSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSV 63

Query: 63  NTRSLLPPPPPPNQLHLS-HNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRG 122
           N RS + P     QL L  H++F+P            + N  +       N +   +   
Sbjct: 64  NMRSYVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLH 123

Query: 123 GANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFP 182
             +E+P+ P  NRPPEKRQRVPSAYNRFIK+EIQRIKA NPDI+HREAFSAAAKNWAHFP
Sbjct: 124 QQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFP 183

Query: 183 HIHFGLMPDQTVKRTSNMRPHHPQEAGED-VRMRTGYYG-AQANVGVSPY 230
           HIHFGL+PD    + +NM    PQ+ GED + M+ G+Y  A ANVGV+PY
Sbjct: 184 HIHFGLVPDNQPVKKTNM----PQQEGEDNMVMKEGFYAPAAANVGVTPY 229
[Close]
BLAST of Spo11379.1 vs. ExPASy Swiss-Prot
Match: YAB3_ORYSJ (Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.600e-51
Identity = 129/256 (50.39%), Postives = 146/256 (57.03%), Query Frame = 1 

		  

Query: 22  EQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNTRSLL------------- 81
           EQLCY+ C  CDTVL VSVPSSSL++TVTVRCGHC+ LL VN R LL             
Sbjct: 58  EQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLPTTAAAAPPPPP 117

Query: 82  --PPPPPPNQLHLSHNF-----FSPTSHYRLGEMPN-QSPNFSLTQPGGASNYMT----- 141
             PPPPPP   H  H+        P  H  L E+    SP   L +  G    M      
Sbjct: 118 PPPPPPPPPAAHFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGLGGLMASAASC 177

Query: 142 -------------PTLSRGGA---NELPRVPTT--NRPPEKRQRVPSAYNRFIKDEIQRI 201
                        P  S+G A      PR  T   NRPPEKRQRVPSAYNRFIKDEIQRI
Sbjct: 178 RNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFIKDEIQRI 237

Query: 202 KAQNPDITHREAFSAAAKNWAHFPHIHFGLMPD-QTVKRTSNMRPHHPQEAG---EDVRM 230
           KA NPDI+HREAFSAAAKNWAHFPHIHFGLMPD Q +K+TS +   H ++ G   E +  
Sbjct: 238 KAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLLPQDHQRKDGLLKEGLYA 297
[Close]
BLAST of Spo11379.1 vs. TAIR (Arabidopsis)
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 215.7 bits (548), Expect = 3.000e-56
Identity = 131/250 (52.40%), Postives = 157/250 (62.80%), Query Frame = 1 

		  

Query: 2   SSSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLP 61
           S S SS+       D F S++QLCY+ CS CDTVLAVSVP SSL+KTVTVRCGHC++LL 
Sbjct: 3   SMSMSSSSAPAFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLS 62

Query: 62  VNT--RSLL---------------PPPPPPNQLHLSH------NFFSPTSHYRLGEMPNQ 121
           V    R+LL               PPPPPPN L          N     SH+     PN+
Sbjct: 63  VTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNE 122

Query: 122 SPNFSLTQPGGASNYMTPTLSRGGANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIK 181
               + T+ G + +++          E+PR P  NRPPEKRQRVPSAYNRFIK+EIQRIK
Sbjct: 123 HLVMA-TRNGRSVDHL---------QEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIK 182

Query: 182 AQNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKRTSNMRPHHPQEAGEDVRM-RTGY 228
           A NPDI+HREAFSAAAKNWAHFPHIHFGLM D    + +N+R    Q+ GED  M R G+
Sbjct: 183 AGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVR----QQEGEDGMMGREGF 238
[Close]
BLAST of Spo11379.1 vs. TAIR (Arabidopsis)
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 214.5 bits (545), Expect = 6.600e-56
Identity = 122/230 (53.04%), Postives = 152/230 (66.09%), Query Frame = 1 

		  

Query: 3   SSTSSTITTNLSLDPFPSSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPV 62
           SS SS  +   S D F  S+ LCY+QC+ C T+LAV+VP +SL+KTVTVRCG CT+LL V
Sbjct: 4   SSMSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSV 63

Query: 63  NTRSLLPPPPPPNQLHLS-HNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRG 122
           N RS + P     QL L  H++F+P            + N  +       N +   +   
Sbjct: 64  NMRSYVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLH 123

Query: 123 GANELPRVPTTNRPPEKRQRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFP 182
             +E+P+ P  NRPPEKRQRVPSAYNRFIK+EIQRIKA NPDI+HREAFSAAAKNWAHFP
Sbjct: 124 QQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFP 183

Query: 183 HIHFGLMPDQTVKRTSNMRPHHPQEAGED-VRMRTGYYG-AQANVGVSPY 230
           HIHFGL+PD    + +NM    PQ+ GED + M+ G+Y  A ANVGV+PY
Sbjct: 184 HIHFGLVPDNQPVKKTNM----PQQEGEDNMVMKEGFYAPAAANVGVTPY 229
[Close]
BLAST of Spo11379.1 vs. TAIR (Arabidopsis)
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 166.8 bits (421), Expect = 1.600e-41
Identity = 93/175 (53.14%), Postives = 111/175 (63.43%), Query Frame = 1 

		  

Query: 20  SSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNTRSLLPPPPPPNQLHL 79
           SSE++CY+ CS C T+LAVSVP +SL+  VTVRCGHCT+LL +N    L           
Sbjct: 6   SSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSL----------- 65

Query: 80  SHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGANELPRVPTTNRPPEKR 139
            H   +P  H  L      + +    +   +S+  T  LS     E PR+P   RPPEKR
Sbjct: 66  -HQTSAPPIHQDLQPHRQHTTSLVTRKDCASSSRSTNNLSENIDREAPRMPPI-RPPEKR 125

Query: 140 QRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVK 195
           QRVPSAYNRFIK+EIQRIKA NP+I+HREAFS AAKNWAHFPHIHFGL  D   K
Sbjct: 126 QRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKK 167
[Close]
BLAST of Spo11379.1 vs. TAIR (Arabidopsis)
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein)

HSP 1 Score: 164.5 bits (415), Expect = 7.900e-41
Identity = 88/169 (52.07%), Postives = 108/169 (63.91%), Query Frame = 1 

		  

Query: 20  SSEQLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNTRSLLPPPPPPNQLHL 79
           ++EQLCY+ C+ C+ +LAV+VP SSL+  VTVRCGHCT+L  VN  + L     PN    
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNF--- 66

Query: 80  SHNFFSPTSHYRLGEMPNQSPNFSLTQPGGASNYMTPTLSRGGANELPRVPTTNRPPEKR 139
                             Q+ N+++ + G +S   T   SR     +      NRPPEKR
Sbjct: 67  ------------------QATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKR 126

Query: 140 QRVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHIHFGLM 189
           QRVPSAYN+FIK+EIQRIKA NPDI+HREAFS AAKNWAHFPHIHFGLM
Sbjct: 127 QRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154
[Close]
BLAST of Spo11379.1 vs. TAIR (Arabidopsis)
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.200e-28
Identity = 75/164 (45.73%), Postives = 95/164 (57.93%), Query Frame = 1 

		  

Query: 23  QLCYLQCSRCDTVLAVSVPSSSLYKTVTVRCGHCTHLLPVNTRSLLPPPPPPNQLHLSHN 82
           Q+C++QC  C T+L VSVP +SL   VTVRCGHCT LL VN   L+     P  L  S +
Sbjct: 20  QICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVN---LMKASFIPLHLLASLS 79

Query: 83  FFSPTSHYRLGEMPN-QSPNFSLTQPGGASNYMTPTLSRGGANELPRV-PTTNRPPEKRQ 142
               T    +      +   + + Q    S     + S     ++ RV    N+PPEKRQ
Sbjct: 80  HLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQ 139

Query: 143 RVPSAYNRFIKDEIQRIKAQNPDITHREAFSAAAKNWAHFPHIH 185
           R PSAYN FIK+EI+R+KAQNP + H+EAFS AAKNWAHFP  H
Sbjct: 140 RAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 180
The following BLAST results are available for this feature:
BLAST of Spo11379.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902189831|gb|KNA11476.1|1.5e-129100.hypothetical protein SOVF_1348... [more]
gi|731330525|ref|XP_010676177.1|2.0e-10281.9PREDICTED: axial regulator YAB... [more]
gi|731330527|ref|XP_010676179.1|2.1e-9182.6PREDICTED: protein YABBY 4-lik... [more]
gi|1011997087|ref|XP_015963203.1|3.0e-7467.9PREDICTED: protein YABBY 4-lik... [more]
gi|922363598|ref|XP_003608761.2|5.1e-7465.6plant-specific transcription f... [more]
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BLAST of Spo11379.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QY62_SPIOL1.0e-129100.Uncharacterized protein OS=Spi... [more]
A0A0J8CG91_BETVU1.4e-10281.9Uncharacterized protein OS=Bet... [more]
A0A0J8CKI1_BETVU1.4e-9182.6Uncharacterized protein OS=Bet... [more]
G7JK46_MEDTR3.5e-7465.6Plant-specific transcription f... [more]
I1MUX5_SOYBN2.3e-7367.4Uncharacterized protein OS=Gly... [more]
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BLAST of Spo11379.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YAB4_ORYSJ3.3e-5752.1Protein YABBY 4 OS=Oryza sativ... [more]
YAB4_ORYSI3.3e-5752.1Protein YABBY 4 OS=Oryza sativ... [more]
YAB3_ARATH5.3e-5552.4Axial regulator YABBY 3 OS=Ara... [more]
YAB1_ARATH1.2e-5453.0Axial regulator YABBY 1 OS=Ara... [more]
YAB3_ORYSJ1.6e-5150.3Protein YABBY 3 OS=Oryza sativ... [more]
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BLAST of Spo11379.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G00180.13.0e-5652.4Plant-specific transcription f... [more]
AT2G45190.16.6e-5653.0Plant-specific transcription f... [more]
AT1G08465.11.6e-4153.1Plant-specific transcription f... [more]
AT2G26580.17.9e-4152.0plant-specific transcription f... [more]
AT1G23420.11.2e-2845.7Plant-specific transcription f... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006780YABBY proteinPANTHERPTHR31675FAMILY NOT NAMEDcoord: 1..229
score: 2.4E
IPR006780YABBY proteinPFAMPF04690YABBYcoord: 20..187
score: 2.9
IPR009071High mobility group box domainGENE3D1.10.30.10coord: 136..179
score: 8.
IPR009071High mobility group box domainunknownSSF47095HMG-boxcoord: 132..180
score: 2.0
NoneNo IPR availablePANTHERPTHR31675:SF4SUBFAMILY NOT NAMEDcoord: 1..229
score: 2.4E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0048825 cotyledon development
biological_process GO:0006412 translation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0019915 lipid storage
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0009640 photomorphogenesis
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0006468 protein phosphorylation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0015976 carbon utilization
biological_process GO:0009909 regulation of flower development
biological_process GO:0050826 response to freezing
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0007275 multicellular organism development
biological_process GO:0051301 cell division
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0006606 protein import into nucleus
biological_process GO:0001510 RNA methylation
biological_process GO:0006364 rRNA processing
biological_process GO:0006396 RNA processing
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0051604 protein maturation
biological_process GO:0006626 protein targeting to mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0016459 myosin complex
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0009506 plasmodesma
cellular_component GO:0030687 preribosome, large subunit precursor
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity
molecular_function GO:0016905 myosin heavy chain kinase activity
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0005515 protein binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0009982 pseudouridine synthase activity
RNA-Seq Expression