Spo11433 (gene) | SpinachBase

Overview


Name	Spo11433
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Acyl carrier protein
Location	SpoScf_00676 : 192577 .. 196788 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCTACTCTGGGATATCAAAAGGGTGGAATTGGAGTTACACTTAACCCATAAACCAACCCAAAGTCTGGTACGGAGTAGAAACTCTACTGAAATTCTGAACCAAAACCCTTGTTCTACATCTCAGTCCACCACCACAAAGGAGAGGGAAAAATACCCAGAAATGGCGATGATGGGAGCTCTCAAAAACGCTATTCTAGCTCACATTCGTGTCCCCGTTTCTCAATTTTCCATTTCCGTCGCTGGATCCAACAAATTGCAGACTTTCCCCAACTTGATTAATCGAGCATTTTCATCACACGACGACCATCTCACCAAAGATCAAGTCACTGATAGAGTCCTCTCTGTCATCAAAGATTTCCCCAAAGTCGATCCTTCCAAGGTCCATTCTCTCTCTTTTGCCTTCTCTGAAATCAGGTTTTCCTCAACTGGATTCGTCGATTTTGTCCCGATAAAATGTGTGTGTGTGTGTTTTTTTTATTTTGAAATTGGGATTGTTGGTTATTGTATGAATGTGATATGATTGTGTGTAGATCAGTATTTGACGATGTTTTTTGTGATTGCGCTTATGTATGATAAACGAACAAATGTTTGAGATGGGGAGTTGTAACGTTTTGATGTTTTTAGGGTTTGGAAGAGTGATTTTAGGGAAGAACAGAAAAATACAAAGTCAGAGTGTTGAATTTATTTTTCTTTACTTTTGGTGGGTTGTTGTTGTACTCCTTGAAACAGTGTAAATGTAATTTGGAGCTATCTTGAAGAAATTTATGTTAAGGGTATGGGTTTAATTTTAAAAGTATGTGCAAAGTTTGGAGGATACCCTTTGCGTGGAATTAGGGTTGACAATGTGTTTCGGTGGAACTAATTTGGAGAGTTTGAATATGATTAAAATAATAAAGTATATATTTAGGGAAGTTGAATTGCGTGTGGTTTATGATGAACATGGTGATAGTCGCTTTCTATGGAGTGAGTTTAGCTCTTCAATTAGTTATTTGGTGTAGTCTCAGAAAAAAGCTATGCAACTTTGTTATGGTTGAGTTATAATTGAATTTCCTTCTTTTCTTATTTTTTATGATTGGTGATGGACTCAATGGGGGCTATTTGGTTTTGAAAGGCAGGTCGAAAGGTTACTATTCTCTTTATTAGGGAAGGAGGCCAACATGCAATTGTTTCTTAATGTGATTGGGTTTATGTGCCTTGGGATAGTTTCTGATAGGTTTCCGGAGTTTTGTGTGAATGACACACTGGAATTTTGTAAAAGTTTCATCATGTTGTGTGAACTAAAGCAGAGTTACTATTTTGTTCAAGGTCCAGTTTGTCTGTAATTTTCAAATGCTAGATCCTGCTTGAATTCCTAGTGAAGCTGAGTGAAGTCCCGAGGAACTATTTAGTGCAGAAGAATTGTAATTTCACATATGTCTTTTGGTTGAATTCCTTCTTTCCGTTTGTTAGACTGAAGGTTGTTGAGTGTTTATAGAAATCTTCCCATTATATCTATAAGTTTGTCATTGGTTGCGGCTTTCCTTTCCCCGTTTCAACTATGGGAGGTAAATTTTCTCTTAAGAGGATTATTTATGTTGTATAGGAAAAGGATTGTTGAAGTAACACCATCCGTTTCTTTTGCTATTTATCATGTAAGAGACTTTCATACTGGTTAGTTGTTACATGATCTGTCGTATGGAATACGGGTCTTAACCCTAGTTTTCTGGTGTTTCTGCCTTCAAAGATATTACCTTTGTTATGGTTTATCAGCAACTACCATAGGAAGAAATAAATCATACTTGTCAAAATTCTGCCTGCAATGTCAATATTTCAAATTGAGGCAGATTGGGGGTTCAATGTCTGTGAACCTGGAGAACAGTCAAAACCTTAAACTTCAAATCCTTTTTCTTGAAATTGACAAATAGGTTCTTCTACTCCACAGTCTCCATAAAACATACTTCGTATATTTCTTTTTAGCATTAAATTGCTTGTATGTAATGTACCTTAGAGATTGTAGATTTCAGAAACTTGCTATTTAGTTCTATGGTCACTATGATCGCTAAATTGCTAAATACATTTTGTATTGATGTTAGGTCTTTCCTGTCTTTATCTCTTTCTCTTTTCTCTGGGGTAGTTAAGGCTCAGACACTTATCTTAATTTCTATTTCTGTTTAGCTTAGAGCCTTATAGTGTAAGTGTGTAACTTTACGTTGGCGGTTTGAAGGAGAACTGATTTTTTGGGGAAAAGATTAATAAATGAGGAAAGAACCTAGTCAAATGCCCTAGCCCAGAGGGTTAGGCATTAATTTTCAACACTATTTGTGTAATACTATTCAATCTTTTGACGAGCTGTCAAAGGAGATAATGTTTGATAATGTTTTGACGACAAGAATTACAGAATAGCCATGACTTTTGAACATGAAGATTAGATGCTTTGCTGTGATACAGAAACCCCCTTTCTCATATCGAAGTGGATGTCGTTTGGGTTAGTATCCATCTGCCTTTGCATTTAGATTTGGAGAAAACATACATGTTTTAGAAAATCTAGAATATGGTTATCCCAAGAGGTCAACATCCATCTCCACATTTTTTACAGAGCCCCATCTAGCAACGATACATGGCTCGGGCAGCATAGTTTGGCCATTTATAACTTAGAAGTCGGAAGGGCTAGAAGCGTTATCTTTCGGAAGAAAGGTAAGCAATGGTGATATTTTCCGTAAAACTTTATCATTGAGTAGGAGGCCATACTGCTGGATTGCTTTCTAAACAGAATGATGTGTAATGTGTATACCTTGTTTATGTTTATTAAGATCTCAGATGCAGCTCATTTCTCTAGACGAGGAGCAATTTTACGATATTACAGAAATCCAGAATAGTCTTGTAAAAACAGTGAAGAGGCACCCATAATAGTCAAAAACTGTTTGAGAGGCTATTTTGGTATCTGATAGTTACATAGATCAATGCTAAAAGTAAGTTGGAGTTTATATGGTGAAGTGTTGTGGACCAATGTGGTTACTACACGAGGTGGCTTGCTTCTATTGATCTTTGCTAGCCAAAGCAACTAATTGAGCAACTTTTAGTTAAGTACCATTTACATTCCCTCACTGACGCTGAAGGTCTTGACCTTTCTCCAGTTGTAAGATGCCGTCTCGTCTTTCCCAAAATCAAAATGTGGAATGTTGTCCTATCTCGTCTTTTTCATTTTCATTTCATGATTCACATAGTGCAGTTCAGGTTTCAATTTTGCAGCTGAGTTTCTGTTGATTTACTTTCACATAGTGCAGTTCAGGTTTCAATTTTGCAGCTGAGTTTCTGTTGATTCACATAGTGCAGTTCAGGTTTCAATTTCGCAGCTGGGTGAGAAAGGAATAATGTTTATAACGGTTTCCTTTCAATCTTCCCGAGCTCGAGTGGCCATCTGTTTGAACAAATTAGTTGGCTTTGATCTCATTTGAAACTCTGCTTTACTGCTGCTTGATTATGAATAATGGTCTTATGCTTTTCCTTTTAGTGAGAACTATGTCACACAGTACTTAGAAAGCAGTTAAACGATAATTGAACGACAAACTGGAGTGGCTATTGAATATTGTCTTTGTTGTAATTGTTTTGCAGGTCACACCTGATGTACATTTCCAGAATGATCTGGGTTTAGACAGCTTGGATAGTGTAGAGCTTGTAATGGCCCTAGAAGAGGAATTCAAATTGGAGATTCCCGACTTGGAGGCAGATAAGCTTGACTCCACTAAGCTTGCCATCGAATACATTTACAACCACCCAATGTCTAGCTGAACCAAGCAATGAAAATTCGTCAATTTTGCTCTGTGCGAAACCATGCATTCGTCAACCCTTTTTTTGTTGCTTCAATTGTTAACTGAATATCGGAAAATGGTCCCTGTGGTTGGGCAATAATCTGTAAGATATTGATAGACAGTACTTGATTCGACCATTTGACCTGTTGAAACATTTTGATAACACCATGGTTGTTTATCCATGTCTGAAATGTAATATGCTGTCTATCAGACTTGAGATCTAAAGTTGCCATGATATACATCCCTTCTTGGAAAGTATGTTTACATAGAGCAAACATTTCACAGAAAATAGGCTTATCCTCTTGATTTGCTCCGATGAATTATTCATTGTTGCCCTCCACCTACCCCTATGGCATGCTATATCATTTGTCTTCATCAACCATCAACCATCAACTTTTGTTTTTGACGGGTTCAACCATCAT

mRNA sequence

CGTCTACTCTGGGATATCAAAAGGGTGGAATTGGAGTTACACTTAACCCATAAACCAACCCAAAGTCTGGTACGGAGTAGAAACTCTACTGAAATTCTGAACCAAAACCCTTGTTCTACATCTCAGTCCACCACCACAAAGGAGAGGGAAAAATACCCAGAAATGGCGATGATGGGAGCTCTCAAAAACGCTATTCTAGCTCACATTCGTGTCCCCGTTTCTCAATTTTCCATTTCCGTCGCTGGATCCAACAAATTGCAGACTTTCCCCAACTTGATTAATCGAGCATTTTCATCACACGACGACCATCTCACCAAAGATCAAGTCACTGATAGAGTCCTCTCTGTCATCAAAGATTTCCCCAAAGTCGATCCTTCCAAGGTCACACCTGATGTACATTTCCAGAATGATCTGGGTTTAGACAGCTTGGATAGTGTAGAGCTTGTAATGGCCCTAGAAGAGGAATTCAAATTGGAGATTCCCGACTTGGAGGCAGATAAGCTTGACTCCACTAAGCTTGCCATCGAATACATTTACAACCACCCAATGTCTAGCTGAACCAAGCAATGAAAATTCGTCAATTTTGCTCTGTGCGAAACCATGCATTCGTCAACCCTTTTTTTGTTGCTTCAATTGTTAACTGAATATCGGAAAATGGTCCCTGTGGTTGGGCAATAATCTGTAAGATATTGATAGACAGTACTTGATTCGACCATTTGACCTGTTGAAACATTTTGATAACACCATGGTTGTTTATCCATGTCTGAAATGTAATATGCTGTCTATCAGACTTGAGATCTAAAGTTGCCATGATATACATCCCTTCTTGGAAAGTATGTTTACATAGAGCAAACATTTCACAGAAAATAGGCTTATCCTCTTGATTTGCTCCGATGAATTATTCATTGTTGCCCTCCACCTACCCCTATGGCATGCTATATCATTTGTCTTCATCAACCATCAACCATCAACTTTTGTTTTTGACGGGTTCAACCATCAT

Coding sequence (CDS)

ATGGCGATGATGGGAGCTCTCAAAAACGCTATTCTAGCTCACATTCGTGTCCCCGTTTCTCAATTTTCCATTTCCGTCGCTGGATCCAACAAATTGCAGACTTTCCCCAACTTGATTAATCGAGCATTTTCATCACACGACGACCATCTCACCAAAGATCAAGTCACTGATAGAGTCCTCTCTGTCATCAAAGATTTCCCCAAAGTCGATCCTTCCAAGGTCACACCTGATGTACATTTCCAGAATGATCTGGGTTTAGACAGCTTGGATAGTGTAGAGCTTGTAATGGCCCTAGAAGAGGAATTCAAATTGGAGATTCCCGACTTGGAGGCAGATAAGCTTGACTCCACTAAGCTTGCCATCGAATACATTTACAACCACCCAATGTCTAGCTGA

Protein sequence

MAMMGALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIYNHPMSS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11433.1	Spo11433.1	mRNA

Homology

[Close]

BLAST of Spo11433.1 vs. NCBI nr
Match: gi|902235772|gb|KNA24075.1| (hypothetical protein SOVF_018310 [Spinacia oleracea])

HSP 1 Score: 256.1 bits (653), Expect = 3.200e-65
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


		  
Query: 1   MAMMGALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVL 60
           MAMMGALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVL
Sbjct: 1   MAMMGALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVL 60

Query: 61  SVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLA 120
           SVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLA
Sbjct: 61  SVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLA 120

Query: 121 IEYIYNHPMSS 132
           IEYIYNHPMSS
Sbjct: 121 IEYIYNHPMSS 131

[Close]

BLAST of Spo11433.1 vs. NCBI nr
Match: gi|731360739|ref|XP_010691982.1| (PREDICTED: acyl carrier protein 1, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 214.5 bits (545), Expect = 1.100e-52
Identity = 112/132 (84.85%), Postives = 121/132 (91.67%), Query Frame = 1


		  
Query: 1   MAMMGALKNAILAHIRVPVSQFS-ISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRV 60
           MAMMGALK AIL HI++P+SQ +  +VAGSNK   F NLINRAFSSHDDHLTKDQVTDRV
Sbjct: 1   MAMMGALKKAILGHIQIPISQTTAFTVAGSNK---FSNLINRAFSSHDDHLTKDQVTDRV 60

Query: 61  LSVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKL 120
           LSVIKDFPKVDPSKVTP+VHFQ DLGLDSLD+VELVMALEEEFKLEIPDLEADK+DS KL
Sbjct: 61  LSVIKDFPKVDPSKVTPEVHFQKDLGLDSLDNVELVMALEEEFKLEIPDLEADKIDSCKL 120

Query: 121 AIEYIYNHPMSS 132
           AIEYI+NHPMSS
Sbjct: 121 AIEYIHNHPMSS 129

[Close]

BLAST of Spo11433.1 vs. NCBI nr
Match: gi|567165796|ref|XP_006397643.1| (hypothetical protein EUTSA_v10001683mg [Eutrema salsugineum])

HSP 1 Score: 175.6 bits (444), Expect = 5.500e-41
Identity = 90/126 (71.43%), Postives = 103/126 (81.75%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKD 65
           AL+ AIL H+RVPV   S+SV GSN+ Q       R+FSSHDDHL+K  V DRVL V+K 
Sbjct: 2   ALRTAILRHLRVPVQ--SLSVTGSNQSQIGFLASIRSFSSHDDHLSKQDVVDRVLDVVKS 61

Query: 66  FPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIY 125
           FPKVDP+KVTPDVHFQ DLGLDSLD+VE+VMA+EEEFKLEIPD EADK+DS  LAIEY+Y
Sbjct: 62  FPKVDPAKVTPDVHFQKDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 121

Query: 126 NHPMSS 132
           NHPMSS
Sbjct: 122 NHPMSS 125

[Close]

BLAST of Spo11433.1 vs. NCBI nr
Match: gi|923809492|ref|XP_013690441.1| (PREDICTED: acyl carrier protein 1, mitochondrial [Brassica napus])

HSP 1 Score: 173.3 bits (438), Expect = 2.700e-40
Identity = 88/126 (69.84%), Postives = 104/126 (82.54%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKD 65
           AL+NA+L H+RVPV   +++V GSN+ Q       RAFSSHDDHL+K  V DRVL V+K 
Sbjct: 2   ALRNAVLRHLRVPVQ--NLAVRGSNQSQIGFLGSIRAFSSHDDHLSKQDVVDRVLDVVKS 61

Query: 66  FPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIY 125
           FPKVDP+KVTPDVHFQ DLGLDSLD+VE+VMA+EEEFKLEIPD EADK+DS  LAIEY++
Sbjct: 62  FPKVDPAKVTPDVHFQKDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVF 121

Query: 126 NHPMSS 132
           NHPMSS
Sbjct: 122 NHPMSS 125

[Close]

BLAST of Spo11433.1 vs. NCBI nr
Match: gi|15224918|ref|NP_181990.1| (acyl carrier protein 1 [Arabidopsis thaliana])

HSP 1 Score: 172.2 bits (435), Expect = 6.100e-40
Identity = 86/126 (68.25%), Postives = 102/126 (80.95%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKD 65
           AL+NAIL H+RVPV    ++ +    L T      R+FSSHDDHL+++ V DRVL V+K 
Sbjct: 2   ALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSHDDHLSREAVVDRVLDVVKS 61

Query: 66  FPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIY 125
           FPKVDPSKVTP+VHFQNDLGLDSLD+VE+VMA+EEEFKLEIPD EADK+DS  LAIEY+Y
Sbjct: 62  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 121

Query: 126 NHPMSS 132
           NHPMSS
Sbjct: 122 NHPMSS 122

[Close]

BLAST of Spo11433.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RX15_SPIOL (Acyl carrier protein OS=Spinacia oleracea GN=SOVF_018310 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.200e-65
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


		  
Query: 1   MAMMGALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVL 60
           MAMMGALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVL
Sbjct: 1   MAMMGALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVL 60

Query: 61  SVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLA 120
           SVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLA
Sbjct: 61  SVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLA 120

Query: 121 IEYIYNHPMSS 132
           IEYIYNHPMSS
Sbjct: 121 IEYIYNHPMSS 131

[Close]

BLAST of Spo11433.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BES1_BETVU (Acyl carrier protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017210 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 7.500e-53
Identity = 112/132 (84.85%), Postives = 121/132 (91.67%), Query Frame = 1


		  
Query: 1   MAMMGALKNAILAHIRVPVSQFS-ISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRV 60
           MAMMGALK AIL HI++P+SQ +  +VAGSNK   F NLINRAFSSHDDHLTKDQVTDRV
Sbjct: 1   MAMMGALKKAILGHIQIPISQTTAFTVAGSNK---FSNLINRAFSSHDDHLTKDQVTDRV 60

Query: 61  LSVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKL 120
           LSVIKDFPKVDPSKVTP+VHFQ DLGLDSLD+VELVMALEEEFKLEIPDLEADK+DS KL
Sbjct: 61  LSVIKDFPKVDPSKVTPEVHFQKDLGLDSLDNVELVMALEEEFKLEIPDLEADKIDSCKL 120

Query: 121 AIEYIYNHPMSS 132
           AIEYI+NHPMSS
Sbjct: 121 AIEYIHNHPMSS 129

[Close]

BLAST of Spo11433.1 vs. UniProtKB/TrEMBL
Match: V4N1V1_EUTSA (Acyl carrier protein OS=Eutrema salsugineum GN=EUTSA_v10001683mg PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.900e-41
Identity = 90/126 (71.43%), Postives = 103/126 (81.75%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKD 65
           AL+ AIL H+RVPV   S+SV GSN+ Q       R+FSSHDDHL+K  V DRVL V+K 
Sbjct: 2   ALRTAILRHLRVPVQ--SLSVTGSNQSQIGFLASIRSFSSHDDHLSKQDVVDRVLDVVKS 61

Query: 66  FPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIY 125
           FPKVDP+KVTPDVHFQ DLGLDSLD+VE+VMA+EEEFKLEIPD EADK+DS  LAIEY+Y
Sbjct: 62  FPKVDPAKVTPDVHFQKDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 121

Query: 126 NHPMSS 132
           NHPMSS
Sbjct: 122 NHPMSS 125

[Close]

BLAST of Spo11433.1 vs. UniProtKB/TrEMBL
Match: A0A078CI24_BRANA (Acyl carrier protein OS=Brassica napus GN=BnaA05g04190D PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.600e-40
Identity = 87/126 (69.05%), Postives = 104/126 (82.54%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKD 65
           AL+NA+L H+RVPV   +++V GSN+ Q       RAFSSHDDHL+K  V DRVL V+K 
Sbjct: 2   ALRNALLRHLRVPVQ--NLAVRGSNQSQIGFLGSMRAFSSHDDHLSKQDVVDRVLDVVKS 61

Query: 66  FPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIY 125
           FPKVDP+KVTP+VHFQ DLGLDSLD+VE+VMA+EEEFKLEIPD EADK+DS  LAIEY++
Sbjct: 62  FPKVDPAKVTPEVHFQKDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVF 121

Query: 126 NHPMSS 132
           NHPMSS
Sbjct: 122 NHPMSS 125

[Close]

BLAST of Spo11433.1 vs. UniProtKB/TrEMBL
Match: M4CKW5_BRARP (Acyl carrier protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.600e-40
Identity = 87/126 (69.05%), Postives = 104/126 (82.54%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKD 65
           AL+NA+L H+RVPV   +++V GSN+ Q       RAFSSHDDHL+K  V DRVL V+K 
Sbjct: 2   ALRNALLRHLRVPVQ--NLAVRGSNQSQIGFLGSMRAFSSHDDHLSKQDVVDRVLDVVKS 61

Query: 66  FPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIY 125
           FPKVDP+KVTP+VHFQ DLGLDSLD+VE+VMA+EEEFKLEIPD EADK+DS  LAIEY++
Sbjct: 62  FPKVDPAKVTPEVHFQKDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVF 121

Query: 126 NHPMSS 132
           NHPMSS
Sbjct: 122 NHPMSS 125

[Close]

BLAST of Spo11433.1 vs. ExPASy Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.800e-42
Identity = 86/126 (68.25%), Postives = 102/126 (80.95%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKD 65
           AL+NAIL H+RVPV    ++ +    L T      R+FSSHDDHL+++ V DRVL V+K 
Sbjct: 2   ALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSHDDHLSREAVVDRVLDVVKS 61

Query: 66  FPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIY 125
           FPKVDPSKVTP+VHFQNDLGLDSLD+VE+VMA+EEEFKLEIPD EADK+DS  LAIEY+Y
Sbjct: 62  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 121

Query: 126 NHPMSS 132
           NHPMSS
Sbjct: 122 NHPMSS 122

[Close]

BLAST of Spo11433.1 vs. ExPASy Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.100e-25
Identity = 66/127 (51.97%), Postives = 88/127 (69.29%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSH--DDHLTKDQVTDRVLSVI 65
           A + A+L ++RV V+    ++    +     +++ R FS       L K +VTDRVLSV+
Sbjct: 2   AARGAMLRYLRVNVNP---TIQNPRECVLPFSILLRRFSEEVRGSFLDKSEVTDRVLSVV 61

Query: 66  KDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEY 125
           K+F KVDPSKVTP  +FQNDLGLDSLDSVE+VMALEEEF  EIPD EADK+ S  LA+++
Sbjct: 62  KNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVDF 121

Query: 126 IYNHPMS 131
           I +HP +
Sbjct: 122 IASHPQA 125

[Close]

BLAST of Spo11433.1 vs. ExPASy Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.300e-18
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1


		  
Query: 43  FSSHDDHLTKDQVTDRVLSVIKDFPKV-DPSKVTPDVHFQNDLGLDSLDSVELVMALEEE 102
           F S   HL KD+V  R+  V+  F KV DP  +T   HF NDLGLDSLD+VE+VMA+EEE
Sbjct: 45  FYSAGGHLKKDEVFSRIAQVLSGFDKVNDPKNITETAHFANDLGLDSLDTVEVVMAIEEE 104

Query: 103 FKLEIPDLEADKLDSTKLAIEYIYNHP 129
           F +EIPD +AD++ S   A+EYI + P
Sbjct: 105 FSIEIPDKDADQIHSVDKAVEYILSQP 131

[Close]

BLAST of Spo11433.1 vs. ExPASy Swiss-Prot
Match: ACPM_MOUSE (Acyl carrier protein, mitochondrial OS=Mus musculus GN=Ndufab1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.300e-15
Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 1


		  
Query: 50  LTKDQVTDRVLSVIKDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDL 109
           LT D + DRVL V+K + K+DP K++ + HF  DLGLDSLD VE++MA+E+EF  EIPD+
Sbjct: 74  LTLDGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 133

Query: 110 EADKLDSTKLAIEYI 125
           +A+KL   +  ++YI
Sbjct: 134 DAEKLMCPQEIVDYI 148

[Close]

BLAST of Spo11433.1 vs. ExPASy Swiss-Prot
Match: ACPM_SCHPO (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.200e-15
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 1


		  
Query: 58  RVLSVIKDFPKV-DPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDS 117
           R+L V+  F K+ DP KVTP   F NDLGLDSLD+VE+VMA+EEEF ++IPD +AD++ S
Sbjct: 38  RILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKDADEITS 97

Query: 118 TKLAIEYIYNHP 129
              AI YI  +P
Sbjct: 98  VGDAISYITKNP 109

[Close]

BLAST of Spo11433.1 vs. TAIR (Arabidopsis)
Match: AT2G44620.1 (mitochondrial acyl carrier protein 1)

HSP 1 Score: 172.2 bits (435), Expect = 2.200e-43
Identity = 86/126 (68.25%), Postives = 102/126 (80.95%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVIKD 65
           AL+NAIL H+RVPV    ++ +    L T      R+FSSHDDHL+++ V DRVL V+K 
Sbjct: 2   ALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSHDDHLSREAVVDRVLDVVKS 61

Query: 66  FPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEYIY 125
           FPKVDPSKVTP+VHFQNDLGLDSLD+VE+VMA+EEEFKLEIPD EADK+DS  LAIEY+Y
Sbjct: 62  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 121

Query: 126 NHPMSS 132
           NHPMSS
Sbjct: 122 NHPMSS 122

[Close]

BLAST of Spo11433.1 vs. TAIR (Arabidopsis)
Match: AT1G65290.1 (mitochondrial acyl carrier protein 2)

HSP 1 Score: 117.5 bits (293), Expect = 6.300e-27
Identity = 66/127 (51.97%), Postives = 88/127 (69.29%), Query Frame = 1


		  
Query: 6   ALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSH--DDHLTKDQVTDRVLSVI 65
           A + A+L ++RV V+    ++    +     +++ R FS       L K +VTDRVLSV+
Sbjct: 2   AARGAMLRYLRVNVNP---TIQNPRECVLPFSILLRRFSEEVRGSFLDKSEVTDRVLSVV 61

Query: 66  KDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKLDSTKLAIEY 125
           K+F KVDPSKVTP  +FQNDLGLDSLDSVE+VMALEEEF  EIPD EADK+ S  LA+++
Sbjct: 62  KNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVDF 121

Query: 126 IYNHPMS 131
           I +HP +
Sbjct: 122 IASHPQA 125

[Close]

BLAST of Spo11433.1 vs. TAIR (Arabidopsis)
Match: AT5G47630.1 (mitochondrial acyl carrier protein 3)

HSP 1 Score: 75.9 bits (185), Expect = 2.100e-14
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1


		  
Query: 4   MGALKNAILAHIRVPVSQFSISVAGSNKLQTFPNLINRAFSSHDDHLTKDQVTDRVLSVI 63
           M  ++++IL H+R+ VS    S+  +        + N    +  D   +DQ+  RV+ ++
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLLQNENGFKSIGIFNFTSEAAADG-GQDQILSRVIELV 60

Query: 64  KDFPKVDPSKVTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLEADKL 115
           K + K + S+VT    FQ DL LDSLD  ELVMA+EEEF +EIPD +ADKL
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKL 110

[Close]

BLAST of Spo11433.1 vs. TAIR (Arabidopsis)
Match: AT3G05020.1 (acyl carrier protein 1)

HSP 1 Score: 48.9 bits (115), Expect = 2.800e-6
Identity = 28/74 (37.84%), Postives = 46/74 (62.16%), Query Frame = 1


		  
Query: 52  KDQVTDRVLSVIKDFPKVDPSK-VTPDVHFQNDLGLDSLDSVELVMALEEEFKLEIPDLE 111
           K +  ++V +++K    + P K V  +  F  DLG DSLD+VE+VM LEEEF +++ + +
Sbjct: 57  KQETIEKVSAIVKKQLSLTPDKKVVAETKFA-DLGADSLDTVEIVMGLEEEFNIQMAEEK 116

Query: 112 ADKLDSTKLAIEYI 125
           A K+ + + A E I
Sbjct: 117 AQKIATVEQAAELI 129

The following BLAST results are available for this feature:

BLAST of Spo11433.1 vs. NCBI nr
BLAST of Spo11433.1 vs. UniProtKB/TrEMBL
BLAST of Spo11433.1 vs. ExPASy Swiss-Prot
BLAST of Spo11433.1 vs. TAIR (Arabidopsis)

BLAST of Spo11433.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902235772\|gb\|KNA24075.1\|	3.2e-65	100.	hypothetical protein SOVF_0183...	[more]
gi\|731360739\|ref\|XP_010691982.1\|	1.1e-52	84.8	PREDICTED: acyl carrier protei...	[more]
gi\|567165796\|ref\|XP_006397643.1\|	5.5e-41	71.4	hypothetical protein EUTSA_v10...	[more]
gi\|923809492\|ref\|XP_013690441.1\|	2.7e-40	69.8	PREDICTED: acyl carrier protei...	[more]
gi\|15224918\|ref\|NP_181990.1\|	6.1e-40	68.2	acyl carrier protein 1 [Arabid...	[more]

BLAST of Spo11433.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RX15_SPIOL	2.2e-65	100.	Acyl carrier protein OS=Spinac...	[more]
A0A0J8BES1_BETVU	7.5e-53	84.8	Acyl carrier protein OS=Beta v...	[more]
V4N1V1_EUTSA	3.9e-41	71.4	Acyl carrier protein OS=Eutrem...	[more]
A0A078CI24_BRANA	5.6e-40	69.0	Acyl carrier protein OS=Brassi...	[more]
M4CKW5_BRARP	5.6e-40	69.0	Acyl carrier protein OS=Brassi...	[more]

BLAST of Spo11433.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ACPM1_ARATH	3.8e-42	68.2	Acyl carrier protein 1, mitoch...	[more]
ACPM2_ARATH	1.1e-25	51.9	Acyl carrier protein 2, mitoch...	[more]
ACPM_NEUCR	1.3e-18	54.0	Acyl carrier protein, mitochon...	[more]
ACPM_MOUSE	2.3e-15	52.0	Acyl carrier protein, mitochon...	[more]
ACPM_SCHPO	5.2e-15	56.9	Putative acyl carrier protein,...	[more]

BLAST of Spo11433.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G44620.1	2.2e-43	68.2	mitochondrial acyl carrier pro...	[more]
AT1G65290.1	6.3e-27	51.9	mitochondrial acyl carrier pro...	[more]
AT5G47630.1	2.1e-14	40.5	mitochondrial acyl carrier pro...	[more]
AT3G05020.1	2.8e-6	37.8	acyl carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 92..127 score: 1.0
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 54..128 score: 17
IPR003231	Acyl carrier protein (ACP)	TIGRFAMs	TIGR00517	TIGR00517	coord: 53..127 score: 1.6
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 83..98 scor
IPR009081	Phosphopantetheine binding ACP domain	GENE3D	1.10.1200.10		coord: 42..129 score: 1.7
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 57..116 score: 6.4
IPR009081	Phosphopantetheine binding ACP domain	PROFILE	PS50075	ACP_DOMAIN	coord: 55..125 score: 13
IPR009081	Phosphopantetheine binding ACP domain	unknown	SSF47336	ACP-like	coord: 51..127 score: 6.81
IPR020806	Polyketide synthase, phosphopantetheine-binding domain	SMART	SM00823	PKS_PP	coord: 56..114 score: 0.
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 1..128 score: 4.2
None	No IPR available	PANTHER	PTHR20863:SF30	SUBFAMILY NOT NAMED	coord: 1..128 score: 4.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051607	defense response to virus
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006833	water transport
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0009853	photorespiration
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006096	glycolytic process
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006810	transport
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09713	0.67	Barchart \| Table
Spo19407	0.67	Barchart \| Table
Spo17619	0.65	Barchart \| Table