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Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTATCCAAACAGCCCCTTAACTCTCCGGCTCTCCCTCCCTCAAATTCTCTCTCCTCTTTTCCTGTTATATTCACATCCTACATCTTTTCCGAAAAAAAAACCCAAAACCCTCATTGACTTGTAAAATATTCAATCTGTTTCATTTCATTCAATCACATAACTATTGCTCCAAATTACCCAAGTTTCAGTTAATTTAATTTATTAATTTATCAATGGACGATCGAACTTGGAGTTTTTCCCTCTCTACTTCTTCTTCCAAGTACAATCAGTCTTCTTACTCTGGTAAAGCTCCAAACTTGTTGAATTGGGTATTTTTTCCCTTTTGATTTTTGAGTGTTTTTTTGCATTTGATTTGGTCGTAATTGATGGGTTTTCGTTGAATTTTTGTGGGTGTTTCTTAATTTTAGCTTTTGATGATGGTTCAGATAATTTATTGGATTATGAAGAGTATGATGGAGATACTGATGTTGAGGTTGATTATCCATGTCCTTTTTGTTCCGAGGATTTCGATATTGTTGGATTATGTTGTCATATTGAAGAGGAGCATTATGATGAAGCAAAAAGAGGGGTATTGTGCTTTTATTTACTATAAACCGACCTTTTATTAATTTCTTCAACTAGTTGATTGACTATTAATTGTAGGTCGTATGATTGTGATTTCATATTCTTTTGATGTAGCTACGGATTAAGTTGAATGTATAATAGACTTGCCTTTTTTTTTATAAATGTTATCGGTATTTTCATGCCTTTCTCGGGATAGGTTTCTGCACATTGTTGGGGAACTTAATAGGGTGGTTCTAGAAGATTACAGGTAGGATAATATGGTTTGATGGTGAACTAATGTATTATGAAGGGTGGGATTATTTGAGGGGTTTAACTGTTGTCGTCTTTGTAGCCATTGTGAATATTCTTAGGCTCTTCACTGATGATGAACATGTGGACTTAACATAGTGTTTTGGCTGACATTTTATGGTCACTGTCTTGTAGAGTTGTAGTTTATGCCAAAAAAATTGAAGTCTAAAGTCTTTTATTGTATATCCTGGCATGAATATAATATGCTGCTTGGTTATCGCCATGGGAAGGATCTGCCTAAAGTTTCCATAAGATGGGTCCGGTTCTCGTGAGGTCCCAACGGGGTTGTATGCAGAACTAAATTACTGAATGTCAATGATTGAATAGGCTTAAGGGATACACCAGCAGAGCCATTTTTTACCTTTTCATGTTGAAGGTTAGAAGTACTTTGAAACGTGAATATCCAAACAAGTGGTAGTTGGGAGGTGCCTCCATGTATCTTGCCAAAATGCATGGCCAAATATGTTTTCATGCATAGGCCAAAGGTGGAAGGGATCTCTGTAAAATTTAAGATAGGAAAGGGGGGGGGGGGGTTCAAGTGTTAGGAGTTAGGACTGCAGTATAGAATATAGATCCTAGAGATAATGTGTGCACAGGGTTCTATATCCAAAAATATTTACGAGGCTTTATTAGTTACTGTTATTGTAAAGTTCTTTTATTTGAAGTCTGGTGTGTGATTTTTAACGGTGACCCTCTTGACAGGTTTGTCCCATGTGTGGTACAAGCGTTGGAGCAGACCTGGTTGAGCACATAGCTTTACAGCATGAAAACATCTATAAGATATCCTTTTATCCCCCCCCCTCCCCTAAATTTGAGGTTTTAGTGGTCGATTGTGTATTCAGAATAAATTTCTACTCTATGTTTCTAAATGCACACCTGTTTATGAATTTATGCTTGTATAACTAGGAAAAGGTTACAGGCAAGAAGTAAGGTCTATGAAAAAGAAGGAAAAAAGGCTAACAAAATATATTCTTCTGAAATAGGCACTATATGCAAGGGTGAATAATTGGTAGACTGAGTTTTCCTGTACTGTCTGCATGATTTCAATGTTTAAACTATCCAAACTACCATGTTCTCCATTGCACCGAGTACACTGGACTGTTATTTCTACCTGAATGATTGCTTATGAGCTCCCATGTTTTCTTAGGGAATCCCAAGACTCCTTGACTTTGGTTTGTGCTGCTTTAATAGTAAAAAGCTTGACTTCTTGAGCTCGTATGATGATCTTATACCTCTTTTGTTTTGTTGAAATTTTATAATAATATCGGTTCTTCTCTCACCTAAAAGTTGAGAGTTGTTTCCTTGACTAAGAACTTACAGCGAGAACAAGACTAGACATAGTCATGGTGATTCTCAGTCTACTCTTGCTTTATTAAGGAAGGAAATGCTAGAGAGAAGTTTGAAATGTCTTCTAGGAAACTCTTCATCTGTGGTTTCTTCCTCTGATGCAGCTGTTGATCAATTACTCACGTCATTCGTCTGTAGCTATTCAACAACTCCTGAGACTGAAAGTAAGCCGTCATGTTCTAAAGATGATTCACCTGTAAAAGAGGAAGTCATGGAGGAGGATACACTAGAGAGGTAGTTCCCTGTTTTACATGTTAAGGATTACTTACTTCCCCCTTGTTATTTTCGATTAGTTGGATACTTGGATCTAGTACATGGCTTTTGTTTGATGTGTCGGAGACTCGGAGGAATATTATTCTGATCCAATGTTTTCATGCTGCACTTTGCAGTGTCATATTACTTTGTGGCATTTTATCTGAAAGTATAACTTCAATGCCTGTTAGGTAATTACTAATTAGATGCAATCAATTATGTATAACATGCTTCGGCTGTCAAAACCTTTAAGGTTTTCCATACTTTTGTTGAGTAATAATGCATCTCTGATGCTTGCTATAAATTCTTATGGATGATGTATGGCATAGTTTAGATGAAGTTGATTAGGCTATGATATTTCAAAGTAAATGGTAAAATGAGAGATCAGACTAAGATGAACATAGGAGGTAGGATAGGCGTTAAGGTCCTGTGATTGACAGGACTCATGAGCAAGATAACTTTTTTCCATGCGATTTGCCAGATCTTAGACATACAGGGTTAAAAGTTTATGACATGTTAGAAGATGACATTATCGCATTATTTTGGTTTAAATTCTCAAACTGAAGAGAATGTTATGCCATAGTTTGGATGGATTACGACGTGGAGTCATGGACATACAAAAATAAAGGAACACTGTTTTTTTTTTTTGTGTTTCTACTCTGCAGAAAAGTTGTATTGGTCTGTTTGTTGAAAAAAATAAAATTGATATGCATATTGGTGTTATTCAGTTACTTAGCAGGTAAATCTTTAAATATGAATGTTTGCTGTAAATTGAGAAATCTAGTGGAGACAAAAAATCAGTGTCAGAAATTGGAGTTTATCATGGAAAGTAAACTCCAGCTCAGCAGTACAGCGTGGAGAAGGGTTAAACTCTCAGCTGGGACACGGGAAGGATGAATCTGTTACGAAAATCAGTGATAGTTCACATAAGATAACAGAAATGGGGTCTAGTGGACTTAGAGACTGAGAGTAATGGGAACTCAAAGGAGAATATGTGCTACTGAGATGACATTGGGAATTTTCCTGGATACTTGGACTAGTGACAAAACTTAGAAGTGGCGAAAATTAATGGTAACTTCTTAACTTGTGCGACGTAAGAGATACATAGGAGGATTTGGAGACTCAGAAGATGAATTAGTAGTACTCAACAGAAATAAATTTTCTACAGAGAGAATTCCTGTGATGTTCTGCTTTAAGGCAGCTCTGGAAAGAATTCATATGATAATCTACCATGCTTCTTAAGGGTGATGATTTTGTGATTATTATACCGTTTTAAGAAGGATGATCGAATGGAAAAGACTTTTCCAACTTGTTGATATCTATTTATGGAGTATATTACTGTTTTAAGAGTAAACAAAAGTAAGAACAGATAAAGTCATGAACCGTGCCTATAATTTGTGAAGATATAAACAGAGGGTGGGGCAGGGCCGAACCGGTAAAGCCAAAGGAAACTGTTATTTCAAATCAATCACTCCCCACCCTAATAGCTGCATTTTCAGCCCCTTCCCCCTGCTCTCTGTATCCATTATGCCCTTTGGTTGTGGCTGTTATCTAGCACTAGATCCGTTTTTCAACTTATTTTTCTTAGGCGATCGAAAACTCTGAAATCACCTCCTTCATTAAAAAAAATTACTGCTGCAGATAATATGTATTTCTTTTGATCTGTGTCATAAATCAGATCTAACTCCTGGTTGCTTCATATTTGGCTGTTCATGGCTGTTGCTGTTTGTGGTTGTTTTGTTACTGCTGAAGTGGGTGCAGTATGTGGGACACCTGACTCAAGATCATCTTGATACGGGTGTTTTAATAGCACTGTGGCCAGTATTGGGGTTTTGATTAGTTAAGTCTGACATGTATCTGAATATCGGGGTTTCCTTATATTGTAGTCTGTTGTGTACTATAGATGTTTTACCCAAGCTTTAGATACGAGCAAGGCATCTAGTAGAATTCAATTCTCTGGTGTGATTTCTTCTATCCATACAAAACATGGGTCTCTGTGGTTTGGTTATCTTAAAAAGTTCATAATTCATACATGTTTTCAGTTCTTTGGAATTTTTGCACTTTTGAACTGCAATTTGTATTTCTCATTCTCTGCTGGGTAAAACTTATACTTCGTATCAAGGAATTTGTGTTCCTTATGTTTGTAACAGCTTCTTCTGCTAATTGTTAAAAACCTATAATAGAGTGACTAACCTGGACGACACTCGTTAGCCTTGTCCCATGAAACCTCAATACCTCATTCATCAATTGATCTACTCCAGAGTGCTTGCTAAGTTGCTAACTTCTATAGGTGTGAGCCAGTATACAAGATGTCTGTCTGTTCATGGTAATGCATTTTAATGCACTTGACTTTTTCCCGGTGAGTTCATTTTGAAACTGTGGAAACAAAGTGGTAATAGACATTAGACAATGAAAGATGAAGAGCTAGTCGACGCATAAGTCAGATTTGACAACCCCTGTGTGGGAACATCCTAAAGTAAAAGATTTTCAGCACAATTTGCTCCTGACAGAACAAACAAATCCTTTACCCCCTACCCCCNCCCCCCCCCCAACTAGGAAAACCAATGCAGTAGATAAAAGAATTTCCGAGTTGATGATTTCAGCTGTAATTGGACTTTTCATAAGCTATTTGTCCAGACCAGCTACTTTCAACGTAACAGGGAGGTTATTGATGGAGTAGTCACCTGGAAAAATTTAAAAAGTCTCCGGCTTAATGTTAGGAAACAGATTAAATATGTGAGTTAGTGCAGGTCTTTCGGAAAGATATCTGTTTTACTGGCCTGTATTTGTTGTTACTTATCTAGAAATAGATAGTTCTGATTCCGGGATTTGAGTATACTATCAATTCAAAGGCCAAACACTCTTGGTGGGAAGAAAGCAAATCAAAGTTTCATGCTTGCTTCCTTGTTATAACTTATAAGTATCATGCTTGCTTTTTGCTGATTGTTGCAGAAAGAGTGAAGTCACTCCCTTGTCAGTCACACTTACTTTTCGAATATTTTCTCTTTCTGAGTTGGTCTCTGACCTATATGGTAATGGCAGGGGCATGAAAAACTGTGTGATATCCGAGGAGAAACAGGAGGAACATGCACAAAAATGCAAATTTATGCAGTCACTTTTGTTCTCAACTATCCTTGATGATGATTTATAGAGTATCCAAACAGCCCCTTAACTCTCCGGCTCTCCCTCCCTCAAATTCTCTCTCCTCTTTTCCTGTTATATTCACATCCTACATCTTTTCCGAAAAAAAAACCCAAAACCCTCATTGACTTGTAAAATATTCAATCTGTTTCATTTCATTCAATCACATAACTATTGCTCCAAATTACCCAAGTTTCAGTTAATTTAATTTATTAATTTATCAATGGACGATCGAACTTGGAGTTTTTCCCTCTCTACTTCTTCTTCCAAGTACAATCAGTCTTCTTACTCTGATAATTTATTGGATTATGAAGAGTATGATGGAGATACTGATGTTGAGGTTGATTATCCATGTCCTTTTTGTTCCGAGGATTTCGATATTGTTGGATTATGTTGTCATATTGAAGAGGAGCATTATGATGAAGCAAAAAGAGGGGTTTGTCCCATGTGTGGTACAAGCGTTGGAGCAGACCTGGTTGAGCACATAGCTTTACAGCATGAAAACATCTATAAGAGCGAGAACAAGACTAGACATAGTCATGGTGATTCTCAGTCTACTCTTGCTTTATTAAGGAAGGAAATGCTAGAGAGAAGTTTGAAATGTCTTCTAGGAAACTCTTCATCTGTGGTTTCTTCCTCTGATGCAGCTGTTGATCAATTACTCACGTCATTCGTCTGTAGCTATTCAACAACTCCTGAGACTGAAAGTAAGCCGTCATGTTCTAAAGATGATTCACCTGTAAAAGAGGAAGTCATGGAGGAGGATACACTAGAGAGGGGCATGAAAAACTGTGTGATATCCGAGGAGAAACAGGAGGAACATGCACAAAAATGCAAATTTATGCAGTCACTTTTGTTCTCAACTATCCTTGATGATGATTTATAG ATGGACGATCGAACTTGGAGTTTTTCCCTCTCTACTTCTTCTTCCAAGTACAATCAGTCTTCTTACTCTGATAATTTATTGGATTATGAAGAGTATGATGGAGATACTGATGTTGAGGTTGATTATCCATGTCCTTTTTGTTCCGAGGATTTCGATATTGTTGGATTATGTTGTCATATTGAAGAGGAGCATTATGATGAAGCAAAAAGAGGGGTTTGTCCCATGTGTGGTACAAGCGTTGGAGCAGACCTGGTTGAGCACATAGCTTTACAGCATGAAAACATCTATAAGAGCGAGAACAAGACTAGACATAGTCATGGTGATTCTCAGTCTACTCTTGCTTTATTAAGGAAGGAAATGCTAGAGAGAAGTTTGAAATGTCTTCTAGGAAACTCTTCATCTGTGGTTTCTTCCTCTGATGCAGCTGTTGATCAATTACTCACGTCATTCGTCTGTAGCTATTCAACAACTCCTGAGACTGAAAGTAAGCCGTCATGTTCTAAAGATGATTCACCTGTAAAAGAGGAAGTCATGGAGGAGGATACACTAGAGAGGGGCATGAAAAACTGTGTGATATCCGAGGAGAAACAGGAGGAACATGCACAAAAATGCAAATTTATGCAGTCACTTTTGTTCTCAACTATCCTTGATGATGATTTATAG MDDRTWSFSLSTSSSKYNQSSYSDNLLDYEEYDGDTDVEVDYPCPFCSEDFDIVGLCCHIEEEHYDEAKRGVCPMCGTSVGADLVEHIALQHENIYKSENKTRHSHGDSQSTLALLRKEMLERSLKCLLGNSSSVVSSSDAAVDQLLTSFVCSYSTTPETESKPSCSKDDSPVKEEVMEEDTLERGMKNCVISEEKQEEHAQKCKFMQSLLFSTILDDDL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11442.1 vs. NCBI nr
Match: gi|902133831|gb|KNA04371.1| (hypothetical protein SOVF_200370 [Spinacia oleracea]) HSP 1 Score: 438.0 bits (1125), Expect = 1.000e-119 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of Spo11442.1 vs. NCBI nr
Match: gi|720010995|ref|XP_010259423.1| (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3-like [Nelumbo nucifera]) HSP 1 Score: 194.9 bits (494), Expect = 1.500e-46 Identity = 108/223 (48.43%), Postives = 149/223 (66.82%), Query Frame = 1
BLAST of Spo11442.1 vs. NCBI nr
Match: gi|1009116765|ref|XP_015874951.1| (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3-like [Ziziphus jujuba]) HSP 1 Score: 191.8 bits (486), Expect = 1.300e-45 Identity = 108/222 (48.65%), Postives = 147/222 (66.22%), Query Frame = 1
BLAST of Spo11442.1 vs. NCBI nr
Match: gi|388517547|gb|AFK46835.1| (unknown [Lotus japonicus]) HSP 1 Score: 189.1 bits (479), Expect = 8.100e-45 Identity = 102/220 (46.36%), Postives = 149/220 (67.73%), Query Frame = 1
BLAST of Spo11442.1 vs. NCBI nr
Match: gi|225437473|ref|XP_002273890.1| (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Vitis vinifera]) HSP 1 Score: 188.3 bits (477), Expect = 1.400e-44 Identity = 100/222 (45.05%), Postives = 147/222 (66.22%), Query Frame = 1
BLAST of Spo11442.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCV5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_200370 PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 7.000e-120 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of Spo11442.1 vs. UniProtKB/TrEMBL
Match: I3T2U3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.700e-45 Identity = 102/220 (46.36%), Postives = 149/220 (67.73%), Query Frame = 1
BLAST of Spo11442.1 vs. UniProtKB/TrEMBL
Match: A0A067JHS7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23255 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.200e-44 Identity = 105/222 (47.30%), Postives = 146/222 (65.77%), Query Frame = 1
BLAST of Spo11442.1 vs. UniProtKB/TrEMBL
Match: A0A061F3H2_THECC (Drought-responsive family protein isoform 1 OS=Theobroma cacao GN=TCM_026729 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.700e-44 Identity = 104/222 (46.85%), Postives = 147/222 (66.22%), Query Frame = 1
BLAST of Spo11442.1 vs. UniProtKB/TrEMBL
Match: A0A067JV74_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18951 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.800e-43 Identity = 108/221 (48.87%), Postives = 143/221 (64.71%), Query Frame = 1
BLAST of Spo11442.1 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 6.200e-37 Identity = 92/225 (40.89%), Postives = 137/225 (60.89%), Query Frame = 1
BLAST of Spo11442.1 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.800e-36 Identity = 92/214 (42.99%), Postives = 137/214 (64.02%), Query Frame = 1
BLAST of Spo11442.1 vs. ExPASy Swiss-Prot
Match: DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana GN=DI19-6 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.200e-34 Identity = 84/224 (37.50%), Postives = 131/224 (58.48%), Query Frame = 1
BLAST of Spo11442.1 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2) HSP 1 Score: 135.2 bits (339), Expect = 8.700e-31 Identity = 86/228 (37.72%), Postives = 130/228 (57.02%), Query Frame = 1
BLAST of Spo11442.1 vs. ExPASy Swiss-Prot
Match: DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1 PE=1 SV=2) HSP 1 Score: 133.3 bits (334), Expect = 3.300e-30 Identity = 79/201 (39.30%), Postives = 120/201 (59.70%), Query Frame = 1
BLAST of Spo11442.1 vs. TAIR (Arabidopsis)
Match: AT3G05700.1 (Drought-responsive family protein) HSP 1 Score: 155.6 bits (392), Expect = 3.500e-38 Identity = 92/225 (40.89%), Postives = 137/225 (60.89%), Query Frame = 1
BLAST of Spo11442.1 vs. TAIR (Arabidopsis)
Match: AT5G26990.1 (Drought-responsive family protein) HSP 1 Score: 147.1 bits (370), Expect = 1.200e-35 Identity = 84/224 (37.50%), Postives = 131/224 (58.48%), Query Frame = 1
BLAST of Spo11442.1 vs. TAIR (Arabidopsis)
Match: AT5G49230.1 (Drought-responsive family protein) HSP 1 Score: 131.0 bits (328), Expect = 9.300e-31 Identity = 91/224 (40.62%), Postives = 131/224 (58.48%), Query Frame = 1
BLAST of Spo11442.1 vs. TAIR (Arabidopsis)
Match: AT1G56280.1 (drought-induced 19) HSP 1 Score: 115.2 bits (287), Expect = 5.300e-26 Identity = 75/201 (37.31%), Postives = 113/201 (56.22%), Query Frame = 1
BLAST of Spo11442.1 vs. TAIR (Arabidopsis)
Match: AT3G06760.2 (Drought-responsive family protein) HSP 1 Score: 109.4 bits (272), Expect = 2.900e-24 Identity = 83/229 (36.24%), Postives = 129/229 (56.33%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11442.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11442.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11442.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11442.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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